Biomedical subjects

R T Constable

Publications and source records attributed to R T Constable.

At least 37 records · Page 2Linked to original sources

PubMed1999

Composite image formation in z-shimmed functional MR imaging.

A challenge in functional magnetic resonance imaging (fMRI) is to develop imaging methods that are highly sensitive to microscopic field inhomogeneities [the blood oxygenation level-dependent (BOLD) effect] and minimally sensitivity to macroscopic fields. z-Shimming compensates for the through-plane dephasing that arises in gradient-echo images due to magnetic field inhomogeneities. To date, an analysis of the formation of composite images from multiple z-shim acquisitions has not been presented. This work compares three strategies for forming composite images, one of which is introduced for the first time, against the nominal image acquisition. True-versus false-positive rates of activation detection are considered, in addition to the time efficiency of the methods. It is shown that z-shimming can provide uniform spatial sensitivity, resulting in increased activation detectability, in many cases outperforming the nominal imaging approach. Time efficiency is shown to be dependent on field uniformity. Theory, computer simulations, and results from fMRI studies are used to demonstrate the performance of these methods.

Arousal↗

PubMed1999

Analysis of J coupling-induced fat suppression in DIET imaging.

The DIET (or dual interval echo train) sequence, a modification of the fast spin echo (FSE) sequence that selectively reduces signal from fat in MR images, has been investigated. The DIET sequence uses an initial echo spacing longer than that of a conventional FSE sequence, thus allowing J coupling-induced dephasing to take effect. The sequence is evaluated theoretically, and its effectiveness on a hydrocarbon (1-pentene) is demonstrated numerically using density matrix calculations. The sequence is also evaluated experimentally using in vitro solutions and in vivo imaging. The efficacy of the sequence is compared for different lipid chemical structures, field strengths, and pulse sequence parameters.

Adipose Tissue↗

PubMed1999

ROC analysis of statistical methods used in functional MRI: individual subjects.

The complicated structure of fMRI signals and associated noise sources make it difficult to assess the validity of various steps involved in the statistical analysis of brain activation. Most methods used for fMRI analysis assume that observations are independent and that the noise can be treated as white gaussian noise. These assumptions are usually not true but it is difficult to assess how severely these assumptions are violated and what are their practical consequences. In this study a direct comparison is made between the power of various analytical methods used to detect activations, without reference to estimates of statistical significance. The statistics used in fMRI are treated as metrics designed to detect activations and are not interpreted probabilistically. The receiver operator characteristic (ROC) method is used to compare the efficacy of various steps in calculating an activation map in the study of a single subject based on optimizing the ratio of the number of detected activations to the number of false-positive findings. The main findings are as follows: Preprocessing. The removal of intensity drifts and high-pass filtering applied on the voxel time-course level is beneficial to the efficacy of analysis. Temporal normalization of the global image intensity, smoothing in the temporal domain, and low-pass filtering do not improve power of analysis. Choices of statistics. the cross-correlation coefficient and t-statistic, as well as nonparametric Mann-Whitney statistics, prove to be the most effective and are similar in performance, by our criterion. Task design. the proper design of task protocols is shown to be crucial. In an alternating block design the optimal block length is be approximately 18 s. Spatial clustering. an initial spatial smoothing of images is more efficient than cluster filtering of the statistical parametric activation maps.

Brain↗

PubMed1999

An event-related fMRI study of implicit phrase-level syntactic and semantic processing.

Most neuroimaging studies of language function to date use a block-subtraction paradigm in which images acquired during relatively long periods of target stimuli are compared to those acquired during a control period. These studies typically require an overt response on the part of the subject, usually some type of discrimination or grammatical judgment by button press, or silent word generation. Results from studies of syntactic and semantic processing have generally been compatible with the classical correlation to Broca's area and Wernicke's area, respectively. Recently, functional magnetic resonance imaging (fMRI) studies departing from the block-subtraction paradigm in favor of event-related fMRI paradigms have been reported. We have extended the use of this approach to examine implicit (i.e., without an explicit task on the part of the subject) syntactic and semantic processing at the phrasal level, using visually presented verb phrases. Left BA 44 is more strongly activated for the syntactic condition than the semantic condition. BA 45, 10, and 46 show laterality differences: mostly left-lateralized for the syntactic condition and right-lateralized for the semantic condition. We also find activations of the inferior parietal lobe, consistent with a visual oddball response reported previously, and the anterior cingulate gyrus (BA 32), implicated for attention and memory-related processes in numerous studies.

Adolescent↗

PubMed1998

Functional disruption in the organization of the brain for reading in dyslexia.

Learning to read requires an awareness that spoken words can be decomposed into the phonologic constituents that the alphabetic characters represent. Such phonologic awareness is characteristically lacking in dyslexic readers who, therefore, have difficulty mapping the alphabetic characters onto the spoken word. To find the location and extent of the functional disruption in neural systems that underlies this impairment, we used functional magnetic resonance imaging to compare brain activation patterns in dyslexic and nonimpaired subjects as they performed tasks that made progressively greater demands on phonologic analysis. Brain activation patterns differed significantly between the groups with dyslexic readers showing relative underactivation in posterior regions (Wernicke's area, the angular gyrus, and striate cortex) and relative overactivation in an anterior region (inferior frontal gyrus). These results support a conclusion that the impairment in dyslexia is phonologic in nature and that these brain activation patterns may provide a neural signature for this impairment.

Brain↗

PubMed1998

Quantifying and comparing region-of-interest activation patterns in functional brain MR imaging: methodology considerations.

The general aims of functional brain magnetic resonance imaging (fMRI) studies are to ascertain which areas of the brain are activated during a specific task, the extent of this activation, whether different groups of subjects demonstrate different patterns of activation, and how these groups behave in different tasks. Many steps are involved in answering such questions and if each step is not carefully controlled the results may be influenced. This work has three objectives. Firstly, to present a technique for quantitatively evaluating methods used in functional imaging data analysis. While receiver-operator-characteristic (ROC) analysis has been used effectively to evaluate the ability of post-processing algorithms to detect true activations while rejecting false activations, it is difficult to adapt such a technique for comparisons of methods for quantitating activations. We present a technique based on the ANOVA, between two or more regions of interest (ROIs), subject groups, or activation tasks, over a range of statistical thresholds, which reveals the sensitivity of different activation quantification metrics to noise and other variables. Secondly, we use this technique to compare two methods of quantifying localized brain activation. There are numerous ways of quantifying the amount of activation present in a specific region of the brain in an individual subject. We compare the pixel count approach, which simply counts the number of pixels above an arbitrary statistical threshold, with an approach based on the sum of t-values above the same arbitrary t-value threshold. Finally, we examine the sensitivity of the results from an analysis of variance, to user defined parameters such as threshold and region of interest size. Both simulated and real functional magnetic resonance data are used to demonstrate these techniques.

Analysis of Variance↗

PubMed1997

Improved activation maps via the elimination of motion effects through time-domain mixing of data in conventional gradient echo functional MRI.

To date, most functional imaging centers have relied on ultrafast imaging approaches such as echo-planar imaging (EPI) techniques for acquiring functional brain activation data. These methods require specialized hardware and are not yet installed widely on clinical MR imagers, thus limiting the application of functional MR imaging at many sites. EPI is used to limit motion artifacts and to collect multiple images under different task paradigms in order to distinguish reliably true signal changes from noise. However, it suffers from poor signal to noise ratio because of the high sampling bandwidth employed. This work presents an approach for increasing the efficiency of functional studies that use conventional gradient echo imaging. In this approach, small numbers of image data sets are acquired and recombined to generate composite datasets with minimized motion artifacts. The technique is introduced, and several algorithms for combining the data are explored. A receiver operator characteristic analysis and in vivo studies are performed to examine the efficacy of this approach for improving functional MR imaging studies.

Algorithms↗

PubMed1997

Measurement of the point spread function in MRI using constant time imaging.

The point spread function is a fundamental property of magnetic resonance imaging methods that affects image quality and spatial resolution. The point spread function is difficult to measure precisely in magnetic resonance even with the use of carefully designed phantoms, and it is difficult to calculate this function for complex sequences such as echo-planar imaging. This report describes a method that measures the point spread function with high spatial resolution at each pixel in samples of uniform intensity distribution. This method uses additional phase encoding gradients before the echo-planar acquisition that are constant in length but vary in amplitude. The additional gradients are applied to image the contents within each individual voxel. This method has been used to measure the point spread function for echo-planar imaging to demonstrate the effects of limited k-space sampling and transverse relaxation, as well as the effects of object motion. By considering the displacement of the point spread function, local distortions due to susceptibility and chemical shift effects have been quantified and corrected. The method allows rapid assessment of the point spread function in echo-planar imaging, in vivo, and may also be applied to other rapid imaging sequences that can be modified to include these additional phase encoding gradients.

Brain↗

PubMed1997

An fMRI study of the human cortical motor system response to increasing functional demands.

Functional magnetic resonance imaging (fMRI) was used to study activation changes in the human primary motor-sensory areas (MAs), supplementary motor areas (SMAs), premotor areas (PMAs) and the superior and inferior parietal areas (SPAs, IPAs) during right hand finger movements as the rate, force and complexity of movement were varied. A preliminary reproducibility study of a single subject doing the same repetitive index finger movements in nine different sessions over a six week period demonstrated highly consistent and highly localized activation in the contralateral MA. ANOVAs demonstrated highly significant main effects of increasing the force and complexity of movement, thereby illustrating the distributed and integrated systemic character of the cortical motor system. Interactions between brain region and the rate and complexity of movements suggested functional specialization of some components of the system. Increasing the rate of movement led to increased activity only in the contralateral MA; increasing complexity led to greater increases in activity in the left and right SPAs and the left IPA than in other areas. Although activation was evident in varying degree throughout the multiple motor areas, only the MAs showed consistent lateralization of activation.

Adult↗

PubMed1997

Predicting reading performance from neuroimaging profiles: the cerebral basis of phonological effects in printed word identification.

This study linked 2 experimental paradigms for the analytic study of reading that heretofore have been used separately. Measures on a lexical decision task designed to isolate phonological effects in the identification of printed words were examined in young adults. The results were related to previously obtained measures of brain activation patterns for these participants derived from functional magnetic resonance imaging (fMRI). The fMRI measures were taken as the participants performed tasks that were designed to isolate orthographic, phonological, and lexical-semantic processes in reading. Individual differences in the magnitude of phonological effects in word recognition, as indicated by spelling-to-sound regularity effects on lexical decision latencies and by sensitivity to stimulus length effects, were strongly related to differences in the degree of hemispheric lateralization in 2 cortical regions.

Adult↗

PubMed1996

Three-dimensional strain-rate imaging.

Strain-rate imaging uses large velocity encoding gradients to obtain measurements of velocity that are extremely insensitive to the effects of random noise. The spatial differential of velocity yields the velocity gradient from which the strain-rate and twist-rate tensors can be determined. These tensors represent the distortion of the material and are of interest in the analysis of the dynamic behavior of living tissue (e.g., that of the myocardium). This work presents a new technique that uses the magnitude of the signal in the velocity encoded data to measure through-plane velocity variations at the resolution of the voxel size. The magnitude of the MR signal contains information about the range of phases present within a voxel. When the phase is dependent on the velocity (as in phase velocity imaging), the magnitude contains information about the range of velocities within a voxel. The method presented in this work uses unbalanced slice-refocusing gradients to sample the magnitude variation introduced by the interaction of velocity encoding gradients with spatially dependent velocities. The previously developed in-plane velocity gradient methods can be easily integrated with this new through-plane measurement to characterize the deformation of the myocardium in three spatial dimensions with high accuracy. The applicability of these methods is demonstrated theoretically, in phantoms and in vivo.

Echo-Planar Imaging↗

PubMed1996

Auditory selective attention: an fMRI investigation.

In the present experiment, 25 adult subjects discriminated speech tokens ([ba]/[da]) or made pitch judgments on tone stimuli (rising/falling) under both binaural and dichotic listening conditions. We observed that when listeners performed tasks under the dichotic conditions, during which greater demands are made on auditory selective attention, activation within the posterior (parietal) attention system and at primary processing sites in the superior temporal and inferior frontal regions was increased. The cingulate gyrus within the anterior attention system was not influenced by this manipulation. Hemispheric differences between speech and nonspeech tasks were also observed, both at Broca's Area within the inferior frontal gyrus and in the middle temporal gyrus.

Adult↗

PubMed1996

Cerebral organization of component processes in reading.

The cerebral organization of word identification processes in reading was examined using functional magnetic resonance imaging (fMRI). Changes in fMRI signal intensities were measured in 38 subjects (19 males and 19 females) during visual (line judgement), orthographic (letter case judgement), phonological (nonword rhyme judgement) and semantic (semantic category judgement) tasks. A strategy of multiple subtractions was employed in order to validate relationships between structure and function. Orthographic processing made maximum demands on extrastriate sites, phonological processing on a number of frontal and temporal sites, and lexical-semantic processing was most strongly associated with middle and superior temporal sites. Significant sex differences in the cerebral organization of reading-related processes were also observed.

Adult↗

PubMed1995

Sex differences in the functional organization of the brain for language.

A much debated question is whether sex differences exist in the functional organization of the brain for language. A long-held hypothesis posits that language functions are more likely to be highly lateralized in males and to be represented in both cerebral hemispheres in females, but attempts to demonstrate this have been inconclusive. Here we use echo-planar functional magnetic resonance imaging to study 38 right-handed subjects (19 males and 19 females) during orthographic (letter recognition), phonological (rhyme) and semantic (semantic category) tasks. During phonological tasks, brain activation in males is lateralized to the left inferior frontal gyrus regions; in females the pattern of activation is very different, engaging more diffuse neural systems that involve both the left and right inferior frontal gyrus. Our data provide clear evidence for a sex difference in the functional organization of the brain for language and indicate that these variations exist at the level of phonological processing.

Adult↗

PubMed1995

An ROC approach for evaluating functional brain MR imaging and postprocessing protocols.

A method that can be used to evaluate the performance of MRI methods for detecting discrete regional activations using functional MRI is presented. Computer derived receiver-operator-characteristic (ROC) curves have been used to evaluate quantitatively a range of conditions encountered in functional MRI studies. ROC analysis allows multiple acquisition strategies and multiple postprocessing strategies to be quantitatively and objectively compared. The authors first present this analysis technique and then illustrate its use for assessing the relative performances of different functional MRI data acquisition strategies using different gradient echo, echoplanar imaging protocols. In addition, the authors have used the ROC analysis to evaluate and compare several methods for analyzing functional MRI data to extract regions of activation. This approach to assessing the performance of different methods is of general use and can be applied to evaluate other data acquisition protocols and postprocessing methods.

Algorithms↗

PubMed1995

Functional magnetic resonance imaging of sensory and motor cortex: comparison with electrophysiological localization.

Functional magnetic resonance (MR) imaging was performed using a 1.5-tesla MR system to localize sensorimotor cortex. Six neurologically normal subjects were studied by means of axial gradient-echo images with a motor task and one or more sensory tasks: 1) electrical stimulation of the median nerve; 2) continuous brushing over the thenar region; and 3) pulsed flow of compressed air over the palm and digits. An increased MR signal was observed in or near the central sulcus, consistent with the location of primary sensory and motor cortex. Four patients were studied using echo planar imaging sequences and motor and sensory tasks. Three patients had focal refractory seizures secondary to a lesion impinging on sensorimotor cortex. Activation seen on functional MR imaging was coextensive with the location of the sensorimotor area determined by evoked potentials and electrical stimulation. Functional MR imaging provides a useful noninvasive method of localization and functional assessment of sensorimotor cortex.

Adult↗

PubMed1994

BOLD MRI monitoring of changes in cerebral perfusion induced by acetazolamide and hypercarbia in the rat.

To evaluate MRI methods for estimating cerebrovascular reserve, we computed changes in the R2* and R2 transverse relaxation rate and apparent diffusion coefficient (ADC) at 2.0 Tesla in five rats after administration of 30 mg of acetazolamide and in four rats during inhalation of 20% carbon dioxide gas. Significant decreases in R2*, corresponding to increases in gradient echo MRI signals, occurred in both the acetazolamide (average change -8.3%, P = 0.005) and the carbon dioxide (-2.7%, P = 0.009) treated animals. The computed values for R2 and ADC were unchanged. The magnitude of the gradient echo MRI changes observed should permit anatomic mapping of blood flow reactivity patterns in normal human subjects and in patients at risk for cerebrovascular disease.

Acetazolamide↗

PubMed1994

Functional NMR imaging using fast spin echo at 1.5 T.

Functional NMR imaging of the brains response to a simple visual task has been performed using a fast spin echo (FSE) imaging sequence at 1.5 T. The FSE method refocuses dephasing effects induced by large-scale susceptibility variations, and permits imaging in regions where macroscopic field gradients produce artifacts in gradient echo sequences. At 1.5 T, gradient echo (GRE) sequences are sensitive to the effects of brain activation, but relatively large effects may arise from large vessels and veins, and these may dominate the effects produced by smaller capillaries. Spin echo (SE) sequences with short echo times are relatively immune to large vessel effects and emphasize the susceptibility induced losses from small capillaries, but the imaging time for these sequences is prohibitive for most functional brain studies. We demonstrate that multislice functional brain imaging may be performed in reasonable imaging times at 1.5 T using an FSE imaging sequence. The FSE sequence with short echo spacing but long effective TE is sensitive to susceptibility induced effects at the capillary level. It is not sensitive to larger scale inhomogeneities such as those found in veins and can be used in regions near tissue/air boundaries. Results are shown comparing conventional GRE and FSE images in activation of the visual cortex and these are supported by theoretical calculations and phantom experiments.

Body Water↗