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Biomedical subjects

M Ishigami

Publications and source records attributed to M Ishigami.

81 records · Page 5Linked to original sources
PubMed1977

The origin of the protein synthesis mechanism.

The origin and development of the protein synthesis mechanism is considered in four successive steps. The genetic code is supposed to be controlled by the relative amount (availability) of various amino acids and nucleotides on the one hand, and utility on each amino acid in the polypeptide. on the other hand. Thus, more simple (inutile) and abundant amino acids tended to correspond to codons which were rich in the less frequent base species, G and C. Features of primitive tRNA in the discrimination of amino acid are discussed. Primitive tRNA is proposed to have a discriminator site for amino acid and, separated from it, an anticodon site for interaction with nucleotides. A hypothetical course of subdivision of various nucleic acid species is proposed. In the scheme, mRNA and ribosomal RNA (rRNA) were derived from more primitive insoluble RNA. DNA appeared in the late, not first, step of the development. Several other aspects of evolutionary development of the whole protein synthesis mechanism, e.g., role of the discriminator site on primitive tRNA, modification and subdivision of code catalogue into a more precise specification of amino acids, and possible primordial interactions between tRNA and tRNA-binding sites on insoluble rRNA, are discussed.

Amino Acyl-tRNA Synthetases↗
PubMed1975

The origin of the genetic code.

A new approach to the origin of the genetic code is proposed based on some regularities in the nucleotide distribution pattern of the code. The relative amounts of various amino acids in primitive proteins were possibly different from those in organisms living today. The primordial ratio was supposed to shift to the modern one guided by the action of primitive nucleotides. Each primitive tRNA had a discriminator site and, distinguished from it, an anticodon site. It also postulated that primordially each amino acid could correspond to a wide variety of codons. During the course of the evolutionary change, a selective mechanism worked among the protobionts so that less frequent nucleotides became associated with more abundant amino acids in the primordial conditions,thus finally leading to the present codon catalogue.

Amino Acids↗
PubMed1975

Depolymerization and de-N-acetylation of glycosaminoglycuronans by the action of alkali in the presence of sodium borohydride.

Depolymerization of Ch-4-S, Ch-6-S, HA and HP was observed by gel filtration after treatment with 2-10 N NaOH or Ba(OH)2 in the presence of NaBH4 at 80-83 degrees for 1-5 hr. Depolymerized products were isolated after these treatments. 4-Deoxy-alpha-L-threo-4-enohexopyranosyluronic acid residue as the nonreducing end group was demonstrated by the H-1 and H-4 proton signals in the NMR spectra and by the absorption at 225-230 nm. L-Gulonic acid, which was produced from D-glucuronic acid by the action of NaBH4, was detected as the reducing end group in the depolymerized products of Ch-6-S, but no hexosaminitol was detected. De-N-acetylation to the extent of 34-50% occurred after treatment with 2.5 N NaOH in the presence of NaBH4, and almost complete de-N-acetylation accompanied by considerable destruction was observed with Ch-4-S and Ch-6-S after treatment with 5.5-10.0 N NaOH. A reaction mechanism is proposed for the depolymerization of glycosaminoglycuronans by the action of alkali.

Alkalies↗