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B N Kholodenko

Publications and source records attributed to B N Kholodenko.

At least 73 records · Page 4Linked to original sources

[Kinetic modeling of energy metabolism and generation of active forms of oxygen in hepatocyte mitochondria].

Direct nonenzymatic oxidation of semiquinone by oxygen is one of the main sources of superoxide radicals (O2.-) in mitochondria. By using all the known data on hepatocyte mitochondria, we have revealed the correlation between the rate of superoxide generation by the bc1 complex and the transmembrane potential (delta psi). If the main electrogenic stage of the Q cycle is suggested to be the electron transfer between the cytochrome b hemes, then the rate of superoxide generation sharply increases when delta psi grows from 150 mV to 180 mV. However, this interrelation is ambiguous. Indeed, the increase of the generation rate with the growth of the potential can occur faster when succinate dehydrogenase is inhibited by malonate than when external ADP is exhausted. When the potential is changed by adding phosphate or potassium (K+), the rate of O2.- production remains constant, although the comparison of the rate values at the same delta psi reveals the effect of phosphate or potassium. It turned out that the rate of O2.- generation is a function of delta mu H rather than any of its components. Phosphate and K+ have practically no influence on delta mu H, since the change in delta psi is compensated by delta pH. The rate of superoxide generation by the bc1 complex is a multiple function of the electron-transfer activity of enzymes, the processes determining the membrane potential (e.g., loading), and of the oxygen concentration. The kinetic model proposed in this work may serve a tool to understand how the superoxide production is regulated.

Adenosine Diphosphate↗

[Quantitative model of human erythrocyte glycolysis. I. Relationship between the stationary rate of glycolysis and the ATP concentration].

A mathematical model is presented of the Embden--Meyerhof pathway in the human red blood cell. The rate of the system stationary flux is determined by the first part of the chain including three enzymatic reactions. The function has been calculated which describes the dependence of the stationary rate of glucose consumption and ATP production on the concentration of ATP. The curve has a bell shape with the physiological normal point situated in the descending segment. The descending segment is a result of the inhibition of the phosphofructokinase by ATP and the strong inhibition of the hexokinase by glucose-6-phosphate.

Adenosine Triphosphate↗

[Quantitative model of human erythrocyte glycolysis. Region of cell viability determined by ATP concentration].

The boundaries of the cell vitality domain in the enzyme activity space are calculated on the basis of a mathematical model of erythrocyte glycolysis. The boundaries are determined by key metabolite concentrations. The results obtained are compared with experimental data related to erythrocytic enzymopathies. It is shown that theoretical boundary enzyme activities coincide with the activities of hexokinase and in some cases phosphofruktokinase in enzyme deficient erythrocytes.

Adenosine Triphosphatases↗

[Quantitative model of human erythrocyte glycolysis. Relationship between erythrocyte energy metabolism and Na+, K+-ATPase activity].

The influence of the changes of the transport Na+, K+-ATPase activity on the human red blood cell (RBC) glycolysis was studied. Two different types of energetic regulation were found out under the strophanthin inhibition. A decrease of ATP comsumption results in a drop of glucose consumption and lactate production in the first type regulation of RBC. In the second type regulation of RBC the glucose consumption does not change after ATPase inhibition and the excess metabolic flux is directed through the hexosemonophosphate shunt. In both cases the resulting decrease of ATP production leads to the ATP level stabilization. An increase of potassium ions concentration in the external medium does not influence the RBC glycolysis. The valinomycin added increases the glucose consumption and the lactate production. The cell volume decreases under the effect of valinomycin.

Erythrocytes↗

[Theory of metabolism regulation: a complete system of equations for regulation coefficients].

Basic quantitative parameters of control in a metabolic system are considered: control coefficients of enzymes with respect to metabolic fluxes and concentrations, and in the case when there are conservation laws, the response coefficients of metabolic fluxes and concentrations to changes in the conserved sums of metabolite concentrations (e. g. conserved moieties). Relationships are obtained which generalize the well known connectivity relations for the case of metabolites binding by conservation laws. Additional relationships are obtained which complement the set of connectivity relations up to the complete system of equations for determining all the control coefficients. The control coefficients are expressed through the enzyme elasticity coefficients, steady state metabolic fluxes and concentrations. Formulas are derived which express response coefficients of flux and concentrations through the enzyme control and elasticity coefficients and metabolite concentrations.

Enzymes↗

[Control of molecular transformations in polyenzyme systems: quantitative theory of the regulation of metabolism].

An attempt of a comprehensive treatment of the theory of metabolic control is presented. The introductory section giving an outline of the early development of the theory, is followed by definitions quantifying the control in the metabolic system. By means of the perturbation method the complete system of equations is obtained which allows one to express all the enzyme control coefficients ("global" coefficients) through the elasticity coefficients characterizing kinetic properties of individual enzymes ("local" coefficients) and through the steady-state values of metabolic fluxes and concentrations. It is shown how connectivity relations between global and local coefficients should be modified when conserved sums of intermediates are present in the system. A new theorem is derived, it allows one to express the global response of the system to any change in the external parameter (such as external effector concentration, or temperature, pH, ionic strength, ets.) through the control coefficients and local responses of individual reaction steps. Explicit formulas are derived for response coefficients of the fluxes and concentrations to changes in the conserved sums of intermediates, which express the values of these global coefficients through the control and elasticity coefficients of enzymes and steady-state pools. The results obtained comprise as a special case all the results published so far in the literature.

Kinetics↗

[A new theorem in the theory of metabolism regulation: how external parameters control the flow and concentration of metabolites].

A simple theorem is derived concerning "global" and "local" coefficients of metabolic network. The coefficients of the flux and concentration response to changes in the external parameters (temperature, ionic strength, pH, external effectors) are considered. These coefficients are expressed through the sum of the control coefficients multiplied by the elasticity coefficients for all the enzymes of the metabolic pathway.

Mathematics↗

[Degree of stability of metabolic chain with 1 feedback loop].

Relationship was studied between the stability degree of the metabolic chain with one loop of the negative feedback and force of coupling and values of characteristic times of the chain reactions. For the chain with arbitrary values of characteristic times of individual stages the maximal possible degree of the chain stability and corresponding value of the feedback coefficient are estimated. It has been shown that the increase of the characteristic time of one (no more) reaction and decrease of the sum of characteristic times of other reactions which it is of advantage to make equal makes it possible to combine high degree of dynamic stability and consequently sufficient rate of transitory processes in the chain with a high quality of stabilization of the final product, i.e. with a strong negative feedback.

Feedback↗

[The mitochondrial carrier of adenylates controls ATP production in the physiological range of respiration rates].

The problem is considered concerning the amount of control exerted by different mitochondrial enzymes on oxidative phosphorylation. Using the data of Groen et al. (1982) it has been found that when the respiration rates for isolated mitochondria ranged from 30 to 50 per cent of that in state 3 (which is in apparent physiological range) the contribution of the adenine nucleotide translocator to the control of ATP production was no less than 90 per cent taking for 100 per cent the total contribution of all mitochondrial enzymes.

Adenine Nucleotides↗

[Stabilization of the relative concentration of ATP and invariants in the regulation of erythrocyte energy metabolism].

The problem is considered concerning the effect of individual differences of erythrocyte energetic metabolism parameters in the regulation (stablization) of ATP level. It has been found that equal quality of stabilization of relative ATP concentration (ATP/(AMP+ADP+ATP)) in erythrocytes with very different individual parameters is provided, firstly, by presence of scaling invariance of the characteristics of ATP-producing and ATP-consuming systems, and, secondly, by coincidence between the physiological values of ATP/(AMP+ADP+ATP) ratio for all the individuals. Scaling invariance property results in the essential reduction of the effective dimension of the individual parameters space. Revealed is a single parameter (function of all individual parameters), which defines the level of relative ATP concentration or the erythrocyte energy charge. The hypothesis is formulated that erythrocyte has two levels of energetic metabolism regulation, of which the first level is responsible for regulation of relative ATP concentration (due to the self-energy system functioning), while the second one provides (for a long time) regulation of the individual parameter values.

Adenosine Diphosphate↗

[Power-law approximation and similarity properties of metabolic regulatory characteristics].

A simple procedure is given to estimate the parameters and error of power--law approximation of rate laws for a wide class of irreversible enzyme reactions. Conditions are formulated assuring the validity of the following similarity law of regulatory characteristics: in homological metabolic chains of different individuals steady--state flux dependences on key compound concentration can be made identical by means of scale transformation, with coefficients determined by individual parameters.

Enzymes↗