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The genome sequence of a flea beetle, Neocrepidodera transversa (Marsham, 1802).

We present a genome assembly from a male specimen of Neocrepidodera transversa (flea beetle; Arthropoda; Insecta; Coleoptera; Chrysomelidae). The genome sequence has a total length of 671.30 megabases. Most of the assembly (93.58%) is scaffolded into 21 chromosomal pseudomolecules, including the X chromosome. The mitochondrial genome has also been assembled and is 17.02 kilobases in length. Gene annotation of this assembly on Ensembl identified 13,840 protein-coding genes.

Coleoptera

The genome sequence of a flea beetle, Altica lythri Aubé, 1843.

We present a genome assembly from a female specimen of Altica lythri (flea beetle; Arthropoda; Insecta; Coleoptera; Chrysomelidae). This was a triploid specimen and one subgenome was assembled. The genome sequence has a total length of 1,003.51 megabases. Most of the assembly (82.29%) is scaffolded into 12 chromosomal pseudomolecules, including the X sex chromosome. The mitochondrial genome has also been assembled, with a length of 18.39 kilobases. Gene annotation of this assembly on Ensembl identified 18,969 protein-coding genes.

Altica lythri

18S rDNA sequences and the holometabolous insects.

The Holometabola (insects with complete metamorphosis: beetles, wasps, flies, fleas, butterflies, lacewings, and others) is a monophyletic group that includes the majority of the world's animal species. Holometabolous orders are well defined by morphological characters, but relationships among orders are unclear. In a search for a region of DNA that will clarify the interordinal relationships we sequenced approximately 1080 nucleotides of the 5' end of the 18S ribosomal RNA gene from representatives of 14 families of insects in the orders Hymenoptera (sawflies and wasps), Neuroptera (lacewing and antlion), Siphonaptera (flea), and Mecoptera (scorpionfly). We aligned the sequences with the published sequences of insects from the orders Coleoptera (beetle) and Diptera (mosquito and Drosophila), and the outgroups aphid, shrimp, and spider. Unlike the other insects examined in this study, the neuropterans have A-T rich insertions or expansion regions: one in the antlion was approximately 260 bp long. The dipteran 18S rDNA evolved rapidly, with over 3 times as many substitutions among the aligned sequences, and 2-3 times more unalignable nucleotides than other Holometabola, in violation of an insect-wide molecular clock. When we excluded the long-branched taxa (Diptera, shrimp, and spider) from the analysis, the most parsimonious (minimum-length) trees placed the beetle basal to other holometabolous orders, and supported a morphologically monophyletic clade including the fleas+scorpionflies (96% bootstrap support). However, most interordinal relationships were not significantly supported when tested by maximum likelihood or bootstrapping and were sensitive to the taxa included in the analysis. The most parsimonious and maximum-likelihood trees both separated the Coleoptera and Neuroptera, but this separation was not statistically significant.(ABSTRACT TRUNCATED AT 250 WORDS)

Animals

Parasitic and phoretic arthropods of sylvatic and commensal white-footed mice (Peromyscus leucopus) in central Tennessee, with notes on Lyme disease.

Sixteen species of parasitic or phoretic arthropods were collected from 56 white-footed mice, Peromyscus leucopus, live-trapped in central Tennessee from April through November 1987. Arthropod infestation was compared for mice taken from sylvatic (woodland) versus commensal (household) habitats. Three species were recorded from hosts in both habitats: the sucking louse Hoplopleura hesperomydis, the flea Epitedia wenmanni, and the laelapid mite Androlaelaps casalis. Twelve of the 13 remaining arthropod species were taken only from mice trapped in woodland whereas the phoretic glycyphagid mite Glycyphagus hypudaei was collected only from commensal mice. Arthropod faunas on commensal hosts clearly were impoverished. The 12 additional arthropod species recorded from the woodland mice consisted of 1 nidicolous beetle, Leptinus orientamericanus; 1 bot, Cuterebra fontinella; 3 fleas, Ctenophthalmus pseudagyrtes, Orchopeas leucopus and Peromyscopsylla scotti; 1 tick, Dermacentor variabilis; 2 mesostigmatid mites, Androlaelaps fahrenholzi and Ornithonyssus bacoti; 3 chiggers, Comatacarus americanus, Euschoengastia peromysci, and Leptotrombidium peromysci; and 1 undescribed pygmephorid mite of the genus Pygmephorus. Two nymphal and 100 larval D. variabilis were examined for spirochetes and found to be uninfected.

Animals