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The genome sequence of the Tyrrhenian Wall Lizard, Podarcis tiliguerta (Gmelin, 1789) (Squamata: Lacertidae).

We present a genome assembly from an individual female Podarcis tiliguerta (Tyrrhenian Wall Lizard; Chordata; Lepidosauria; Squamata; Lacertidae). The assembly contains two haplotypes with total lengths of 1 462.31 megabases and 1 394.94 megabases. Most of haplotype 1 (99.26%) is scaffolded into 20 chromosomal pseudomolecules, including the W and Z sex chromosomes. Most of haplotype 2 (99.2%) is scaffolded into 18 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, with a length of 17.19 kilobases.

Podarcis tiliguerta; Tyrrhenian Wall Lizard; genom

The genome sequence of the Eurasian common lizard, Zootoca vivipara (von Jacquin, 1787) (Squamata: Lacertidae).

We present a genome assembly from an individual male Zootoca vivipara (Eurasian common lizard; Chordata; Lepidosauria; Squamata; Lacertidae). The assembly contains two haplotypes with total lengths of 1 424.51 megabases and 1 423.70 megabases. Most of the haplotype 1 assembly (99.49%) and the haplotype 2 assembly (99.42%) are each scaffolded into 18 chromosomal pseudomolecules, including the Z 1 and Z 2 sex chromosomes. The mitochondrial genome has also been assembled, with a length of 17.09 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.

Eurasian common lizard

The cell masses in the diencephalon of Amphisbaena darwini heterozonata Burmeister (Amphisbaenia, Squamata, Reptilia).

The cell masses of the diencephalon of Amphisbaena darwini heterozonata are studied and confronted with those of other reptiles, specially with the burrowing ophidian Typhlopidae. The main differences are in the thalamus dorsalis. The amphisbaenids share with the Typhlopidae the absence of the lateral and pretectal geniculate bodies, and share with the squamate reptiles, differing from the typhlopids, the remaining structures of the dorsal thalamus, characterized by the well-developed nucleus rotundus. These features support the idea that the amphisbaenids could be situated within the Squamata at the same level as in Ophidia and Lacertilia. The adaptive processes toward a burrowing behavior have not been the same in amphisbaenids and in the typhlopids. The causes of the dissimilarities of the dorsal thalamus could be related to other sense and non-sense systems apart from the optic. The morphology of the elements of the cell masses has been studied by the Golgi method.

Animals

Glycogen in epidermal nerve terminals of Lacerta sicula (squamata: reptilia).

Proof is given that the granula occuring in the epidermal discoid nerve terminals of Lacerta sicula consist of glycogen. Staining with PA-PbCi shows 300 A sized alpha-particles and 70 A sized beta-particles. The electron-dense boundary appearing after digestion with alpha-amylase consists of limit-dextrins.

Animals

Global Environmental Factors Impact the Evolution of Adult Hemoglobins in Squamata Reptiles (Lizards and Snakes) and Terrestrial Turtles.

Convergent evolution of oxygen transport mechanisms arises from respiratory proteins adapting to similar environmental pressures. We examined this relationship between adult hemoglobin subunits (Hbs: HBA1, HBAD, HBB1, and HBB2) found in land reptiles (lizards, snakes, and turtles) with their global distribution variables: Altitude, latitude, ambient temperature, and biomass production. We found that biomass was positively associated with the synonymous substitution rate (dS) of HBAD, while it showed the opposite trend for HBB2 in snakes. Additionally, latitude was negatively related to the dS of HBB2 in snakes, but nonsignificant with other Hbs. Altitude was negatively associated with ω = dN/dS of HBA1 and HBAD, whereas temperature showed a similar negative trend with the ω of HBAD across reptiles and in HBB2 of snakes. At amino acid sites, we found most were conserved except for 11 (two near the heme-binding pocket) across Hbs. These fast-changing sites shifted from polar to nonpolar residues, showing a pattern seen in high-altitude mammals. Our results highlight that in reptiles (i) Hbs are diversifying at individual amino acid sites while generally some subunits exhibiting lower ω rates at higher altitudes and hotter temperatures, with the later and higher biomass ecosystems also linked to increases in dS; (ii) HBBs are the most conserved of the Hbs; (iii) latitudinal gradients only show a significant association with the dS of HBB2 in snakes; and (iv) gene conversion events occurred across HBBs in reptiles, which confound their homology assignation, except for snakes that evidenced a single major duplication in their HBBs.

Animals

Localization and characterization of luminescent cells in ophiopsila californica and Amphipholis squamate (echinodermata: ophiuroidea).

1. The distribution of luminescence in Ophiopsila californica and Amphipholis squamata is described on the basis of image intensification, fluorescence microscopy, and histological techniques. 2. Luminescence appears to be intracellular. 3. The photogenic cells, termed photocytes, can be identified in histological sections by observation of 460 nm excited fluorescence and appear to have two components: varicosities and processes. The processes are morphologically similar to the neurons of the peripheral nervous system and the radial nerve cord. 4. The theory of gland cells as sites of luminescence in Ophiopsila spp. and Amphipholis squamata is not supported. 5. The emission spectra of luminescence in O. californica and A. squamata are broad with a half band width of 71 nm and an approximate emission maximum at 510 nm. 6. Fluorescence appears only after the onset of luminescence.

Animals

Acetylcholine receptors at neuromuscular synapses: phylogenetic differences detected by snake alpha-neurotoxins.

Phylogenetic differences in acetylcholine receptors from skeletal neuromuscular synapses of various species of snakes and lizards have been investigated, using the snake venom alpha-neurotoxins alpha-atratoxin (cobrotoxin) and alpha-bungarotoxin. The acetylcholine receptors of the phylogenetically primitive lizards, like those from all other vertebrates previously tested, are blocked by these alpha-neurotoxins. In contrast, receptors from snakes and advanced lizards are insensitive to one or both of the toxins. It is suggested that toxin-resistant acetylcholine receptors appeared early in the evolution of Squamata and preceded the appearance of alpha-neurotoxins.

Animals

[The spontaneous change in the optokinetic reactivity in lizards].

The optokinetik reactivity of lizards (Calotes versicolor Daud., Agamidae, Squamata) varies spontaneously within seconds. The animals follow the sinusoidal movement of a striped cylinder with head and eyes. Thereby the line of sight may follow exactly the pattern movement without angular slippage, or a slippage of various degree happens, or the animal does even not react at all. The optokinetic reactivity varies continuously and not stepwise. Both eyes may move independently. Accelerated smooth eye movements which overtake the speed pattern movement were observed. In optokinetic reactions the eyes take the bigger part of the angular movement than the head; in cases of vestibular stimulation the reverse is observed concerning the amplitude of the compensatory countermovement. Similar effects of variable optokinetic reactivity in other animals and in man depending on attention are discussed.

Animals

[Details of the muscular and nervous system in the anterior member of Sphenodon punctatus (reptiles-Rhynchocephales)].

Sphenodom is the only Lepidosaurian with an organisation of the nervous ways in the anterior member which constitute an important stage in tetrapod evoluation. Squamata are exceptions. The radial nerve is developed and possesses the most important part of the fibres for the dorsal muscles of the forearm. The flexor canal is separated into 2 voluminous trunks.

Anatomy, Comparative

Body temperature and tumor virus infection. I. Tumorogenicity of Rous sarcoma virus for reptiles.

Rous sarcoma virus (RSV) was oncogenic for the following nine species of reptiles representing 6 families from Chelonia and Squamata orders: family of Testudinidae: 1. Testudo horsfieldi, family Agamidae: 2. Agama sanguinolenta; 3. Agama erythrogastra, family Lacertidae: 4. Eremias persica; 5. Eremias velox; 6. Eremias grammica, family Scincidae: 7. Eumeces taeniolatus, family Boidea: 8. Erix tataricus, 9. Ancistrodom blomhoffi. RSV did not induce tumors in 13 studied species of reptiles. Histologically 26 reptile tumors studied were polymorphous sarcomas with spindle-shaped (fibroblast-like), round and polygonal macrophage-like cells and sometimes peculiar giant polynuclear cells. Chromosomal analysis showed that reptile tumors arose out of reptile cells. RSV was pathogenic for adult reptiles. Reptile tumors did not contain a mature infectious virus. The tumors of 2 snakes were virogenic. The effect of increased temperature at the body level on the transformation of a symptomless viral infection into a viral disease is discussed in the evolutionary aspect.

Animals

[Reverberation of the hindlimb rudimentation on its innervation in squamate reptiles].

When the dimensional reduction of the hind limb begins, a first caudal displacement of the lombar part of the lombo-sacral plexus - which involves the loss of the first root of the sacral part -- appears with a threshold in the increase in the number of presacral vertebrae. This a first indication of the serpentiform tendancy. Others thresholds can conduct to produce the disappearance of the sacral vertebrae and sacral root. The qualitative reduction only concerns the terminal branches of the plexus and does not seem to be associated with the vertebral elongation. If a caudo-proximal reduction of the brachial plexus occurs early in the lepidosaurian line and exists in all the Squamata, even in the Iguana which have well developed limbs, it is not the same for the reduction of the lombo-sacral plexus which does not appear in these Iguana. At last, if the reduction modalities of the both plexus are often differents, their supposed displacements facilitate the extension of the intermediate vertebral region.

Animals

Nasal mites of the subfamily Speleognathinae (Ereynetidae) from birds in Texas.

Nasal mites of the subfamily Speleognathinae were recovered from several species of birds in Texas. New host records include Ophthalmophagus striatus (Crossley) 1952 from Columbigallina passerina, Boydaia clarki Fain 1963 from Callipepla squamata, Boydaia falconis Fain 1956 from Falco sparverius, and Boydaia tyrannus Ford 1959 from Myiarchus cinerascens. Also recovered was Astrida coccyzae Pence 1972 from Coccyzus americanus. Boydaia pheucticola sp. n. from Pheucticus melanocephalus is described. It differs from similar species in the adult female by having the coxal setae formula 2-1-2-0, sensillae clavate but not globose or subglobose, and interior seta on coxa I reduced in size but not vestigial. The larva is differentiated by the modified legs II with one long recurved hooklike claw and a shorter curved claw.

Animals

Ancient Introgression Explains Mitochondrial Genome Capture and Mitonuclear Discordance Among South American Collared Tropidurus Lizards.

Mitonuclear discordance-evolutionary discrepancies between mitochondrial and nuclear DNA phylogenies-can arise from various factors, including introgression, incomplete lineage sorting, recent or ancient demographic fluctuations, sex-biased dispersal asymmetries, among others. Understanding this phenomenon is crucial for accurately reconstructing evolutionary histories, as failing to account for discordance can lead to misinterpretations of species boundaries, phylogenetic relationships, and historical biogeographic patterns. We investigate the evolutionary drivers of mitonuclear discordance in the Tropidurus spinulosus species group, which contains nine species of lizards inhabiting open tropical and subtropical environments in South America. Using a combination of population genetic and phylogenomic approaches applied to mitochondrial and nuclear data, we identified different instances of gene flow that occurred in ancestral lineages of extant species. Our results point to a complex evolutionary history marked by prolonged isolation between species, demographic fluctuations, and potential episodes of secondary contact with genetic admixture. These conditions likely facilitated mitochondrial genome capture while diluting signals of nuclear introgression. Furthermore, we found no strong evidence supporting incomplete lineage sorting or natural selection as primary drivers of the observed mitonuclear discordance. Therefore, the unveiled patterns are most consistent with neutral demographic processes, coupled with ancient mitochondrial introgression, as the main factors underlying the mismatch between nuclear and mitochondrial phylogenies in this system. Future research could further explore the role of other demographic processes, such as asymmetric sex-biased dispersal, in shaping these complex evolutionary patterns.

Animals

Adaptive or non-adaptive? Cranial evolution in a radiation of miniaturized day geckos.

Lygodactylus geckos represent a well-documented radiation of miniaturized lizards with diverse life-history traits that are widely distributed in Africa, Madagascar, and South America. The group has diversified into numerous species with high levels of morphological similarity. The evolutionary processes underlying such diversification remain enigmatic, because species live in different ecological biomes, ecoregions and microhabitats, while suggesting strikingly high levels of homoplasy. To underscore this evolutionary pattern, here we explore the shape variation of skull elements (i.e., cranium, jaw and inner ear) using 3D geometric morphometrics and phylogenetic comparative methods on computed tomography scans (CT-scan) of a sample encompassing almost all recognized taxa within Lygodactylus. The results of this work show that skull and inner ear shape variation is low (i.e., there is high overlapping on the morphospace) across geographic regions, macrohabitats and lifestyles, implying extensive homoplasy. Furthermore, we also found a strong influence of allometry shaping cranial variation both at intra and interspecific levels, suggesting a major constraint underlying skull architecture, probably as a consequence of its miniaturization. The remaining variation that is not allometric is independent of phylogeny and ecological adaptation and can probably be interpreted as the result of intrinsic developmental plasticity. This, in turn, supports the interpretation that speciation in this group is largely concordant with a non-adaptive hypothesis, which results mainly from vicariant processes.

Animals