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At least 19 recordsLinked to original sources
PubMed2004

Protonation study of peroxynitric acid and peroxynitrous acid.

The equilibrium structures and harmonic vibrational frequencies of peroxynitric acid (HOONO(2)) and seven structures of protonated peroxynitric acid, along with peroxynitrous acid (HOONO) and its 12 protonated peroxynitrous acid structures, have been investigated using several ab initio and density functional methods. The ab initio methods include second-order Moller-Plesset perturbation theory, quadratic configuration interaction, including single and double excitations theory (QCISD), and the QCISD(T) methods, which incorporate a perturbational estimate of the effects of connected triple excitation. The Becke three-parameter hybrid functional combined with Lee, Yang, and Parr correlation function is the density functional method used. The lowest energy form of protonated peroxynitric acid is a complex between H(2)O(2) and NO(+) rather than between H(2)O and NO(2) (+). For peroxynitrous acid, a complex between H(2)O(2) and NO(2) (+) is found to be the lowest energy structure. The ab initio proton affinity (PA) of HOONO and HOONO(2) is predicted to be 182.1 and 175.1 kcal mol(-1), respectively, at the QCISD(T)/6-311++G(3df,3pd) level of theory. The results are contrasted with an earlier study on nitrous acid, and is shown that peroxynitric acid and peroxynitrous acid have a smaller PA than nitrous acid.

Journal Article↗
PubMed1999

Effective inhibition by beta-carotene of cellular DNA breaking induced by peroxynitrous acid.

Peroxynitrous acid synthesized by reaction of hydrogen peroxide and nitrite and generated from 3-morpholinosydononimine (SIN-1) induced cellular DNA breaking of human promyelocytic leukemia HL-60 cells in phosphate buffer (pH 7.5) as assessed by alkaline single cell gel electrophoresis (comet) assay and quantification of comet types. Ascorbate and Trolox inhibited cellular DNA breaking induced by peroxynitrous acid, but the concentrations of these antioxidants required for effective inhibition was about 50-fold higher than that of peroxynitrous acid. beta-Carotene protected DNA breaking by peroxynitrous acid in 20% tetrahydrofuran-phosphate buffer (pH 7.5) much more effectively than ascorbate and Trolox. The concentrations of beta-carotene required for effective inhibition was lower than the concentration of peroxynitrous acid.

Antioxidants↗
PubMed2005

Infrared overtone spectroscopy and unimolecular decay dynamics of peroxynitrous acid.

Peroxynitrous acid (HOONO) is generated in a pulsed supersonic expansion through recombination of photolytically generated OH and NO(2) radicals. A rotationally resolved infrared action spectrum of HOONO is obtained in the OH overtone region at 6971.351(4) cm(-1) (origin), providing definitive spectroscopic identification of the trans-perp (tp) conformer of HOONO. Analysis of the rotational band structure yields rotational constants for the near prolate asymmetric top, the ratio of the a-type to c-type components of the transition dipole moment for the hybrid band, and a homogeneous linewidth arising from intramolecular vibrational energy redistribution and/or dissociation. The quantum state distribution of the OH (nu=0,J(OH)) products from dissociation is well characterized by a microcanonical statistical distribution constrained only by the energy available to products, 1304+/-38 cm(-1). This yields a 5667+/-38 cm(-1) [16.2(1) kcal mol(-1)] binding energy for tp-HOONO. An equivalent available energy and corresponding binding energy are obtained from the highest observed OH product state. Complementary high level ab initio calculations are carried out in conjunction with second-order vibrational perturbation theory to predict the spectroscopic observables associated with the OH overtone transition of tp-HOONO including its vibrational frequency, rotational constants, and transition dipole moment. The same approach is used to compute frequencies and intensities of multiple quantum transitions that aid in the assignment of weaker features observed in the OH overtone region, in particular, a combination band of tp-HOONO involving the HOON torsional mode.

Journal Article↗
PubMed2003

Rapid scavenging of peroxynitrous acid by monohydroascorbate.

The reaction of peroxynitrous acid with monohydroascorbate, over the concentration range of 250 microM to 50 mM of monohydroascorbate at pH 5.8 and at 25 degrees C, was reinvestigated and the rate constant of the reaction found to be much higher than reported earlier (Bartlett, D.; Church, D. F.; Bounds, P. L.; Koppenol, W. H. The kinetics of oxidation of L-ascorbic acid by peroxynitrite. Free Radic. Biol. Med. 18:85-92; 1995; Squadrito, G. L.; Jin, X.; Pryor, W. A. Stopped-flow kinetics of the reaction of ascorbic acid with peroxynitrite. Arch. Biochem. Biophys. 322:53-59; 1995). The new rate constants at pH 5.8 are k1 = 1 x 10(6) M(-1) s(-1) and k(-1) = 500 s(-1) for 25 degrees C and k1 = 1.5 x 10(6) M(-1) s(-1) and k(-1) = 1 x 10(3) s(-1) for 37 degrees C. These values indicate that even at low monohydroascorbate concentrations most of peroxynitrous acid forms an adduct with this antioxidant. The mechanism of the reaction involves formation of an intermediate, which decays to a second intermediate with an absorption maximum at 345 nm. At low monohydroascorbate concentrations, the second intermediate decays to nitrate and monohydroascorbate, while at monohydroascorbate concentrations greater than 4 mM, this second intermediate reacts with a second monohydroascorbate to form nitrite, dehydroascorbate, and monohydroascorbate. EPR experiments indicate that the yield of the ascorbyl radical is 0.24% relative to the initial peroxynitrous acid concentration, and that this small amount of ascorbyl radicals is formed concomitantly with the decrease of the absorption at 345 nm. Thus, the ascorbyl radical is not a primary reaction product. Under the conditions of these experiments, no homolysis of peroxynitrous acid to nitrogen dioxide and hydroxyl radical was observed. Aside from monohydroascorbate's ability to "repair" oxidatively modified biomolecules, it may play a role as scavenger of peroxynitrous acid.

Ascorbic Acid↗
PubMed2004

Determination of pipemidic acid based on flow-injection chemiluminescence due to energy transfer from peroxynitrous acid synthesized on-line.

A flow-injection chemiluminescence (CL) method for the determination of pipemidic acid is described. It is based on energy transfer from excited state peroxynitrous acid to pipemidic acid, in which the excited state peroxynitrous acid is synthesized on-line by the mixing of acid hydrogen peroxide with nitrite in a flow system and the CL is from two excited states of pipemidic acid. The proposed method allows the measurement of pipemidic acid over the range of 2.0 x 10(-7)-2.0 x 10(-5) mol l(-1) . The detection limit is 6.3 x 10(-8) mol l(-1), and the relative standard deviation for 2.0 x 10(-6) mol l(-1) pipemidic acid (n = 9) is 0.9%. This method was evaluated by the analysis of pipemidic acid in pharmaceutical preparations.

Energy Transfer↗
PubMed1999

Acidic conditions exacerbate interferon-gamma-induced intestinal epithelial hyperpermeability: role of peroxynitrous acid.

OBJECTIVE: Nitric oxide (NO*) derived from exogenous donors has been shown to increase the permeability of cultured intestinal epithelial monolayers, an effect that is augmented by mildly acidic conditions. Because interferon-gamma (IFN-gamma) also increases intestinal epithelial permeability, at least partly by an NO*-dependent mechanism, we sought to determine whether IFN-gamma-induced hyperpermeability is increased under acidic conditions. METHODS: Human intestinal epithelial (Caco-2BBe) cells were grown as monolayers on permeable supports in bicameral chambers. Permeability was assessed by measuring transepithelial electrical resistance (TER) or the transepithelial passage of fluorescein disulfonic acid. Inducible nitric oxide synthase (iNOS) messenger RNA expression was determined by northern blot analysis. Concentrations of nitrite and nitrate (NO2-/NO3-), stable oxidation products of NO*, were determined using the Greiss reaction. Cellular adenosine triphosphate (ATP) levels were determined using the luciferin/luciferase method. MEASUREMENTS AND MAIN RESULTS: Incubation of Caco-2BBe monolayers with INF-gamma (1000 units/mL) at an extracellular pH (pHo) of 7.4 increased permeability to fluorescein disulfonic acid and decreased TER. However, incubation of monolayers with IFN-gamma under mildly acidic conditions (i.e., pHo 7.0-6.6) accelerated the decrease in TER and augmented the increase in permeability induced by the cytokine. IFN-gamma-induced iNOS messenger RNA expression and NO2-/NO3- accumulation in medium were unaffected by acidic conditions. At pHo 7.4, incubation of Caco-2BBe monolayers with IFN-gamma (1000 units/mL) for 72 hrs had no effect on intracellular ATP content compared with monolayers simultaneously incubated under the same conditions but in the absence of the cytokine. However, when the cells were incubated for 72 hrs with the same concentration of IFN-gamma under mildly acidic conditions (i.e., pHo 7.0 or 6.6), ATP levels were significantly decreased. At pHo 7.0, IFN-gamma-induced increases in permeability were ameliorated by addition of the following agents: 2-phenyl-4,4,5,5- tetramethylimidazoline-1-oxyl-3-oxide (a NO* scavenger), N(G)-monomethyl-L-arginine (a iNOS inhibitor), dimethyl sulfoxide (a hydroxyl radical scavenger), and ascorbate (a peroxynitrous acid scavenger). CONCLUSION: Mild acidosis augments IFN-gamma-induced intestinal epithelial hyperpermeability and ATP depletion, possibly by fostering the formation of peroxynitrous acid and/or hydroxyl radical.

Adenosine Triphosphate↗
PubMed1999

Effect of beta-carotene on the transformation of tyrosine by nitrogen dioxide and peroxynitrous acid.

In the NO2-exposure of tyrosine in 70% dioxane/phosphate buffer (pH 7.4), beta-carotene enhanced the degradation of tyrosine and/or 3-nitrotyrosine produced, whereas alpha-tocopherol and ascorbyl palmitate inhibited the transformation of tyrosine into 3-nitrotyrosine. Generation of certain active species in the interaction of beta-carotene with NO2 was suggested. Ascorbyl palmitate effectively and alpha-tocopherol slightly inhibited the transformation of tyrosine in the NO2-exposure in the presence of beta-carotene. In the reaction of tyrosine with ONOO-/ONOOH, beta-carotene enhanced the degradation of 3-nitrotyrosine produced suggesting generation of certain active species, whereas alpha-tocopherol and ascorbyl palmitate completely suppressed the transformation of tyrosine into 3-nitrotyrosine.

Ascorbic Acid↗
PubMed1997

Nitric oxide-induced hyperpermeability of human intestinal epithelial monolayers is augmented by inhibition of the amiloride-sensitive Na(+)-H+ antiport: potential role of peroxynitrous acid.

BACKGROUND: Nitric oxide (NO.) increases the permeability of cultured intestinal epithelial monolayers. NO. reacts with superoxide anion to form peroxynitrite anion, which can be protonated under mildly acidic conditions to form the potent and versatile oxidizing agent, peroxynitrous acid. We hypothesized that intracellular acidosis induced by the Na(+)-H+ antiport blocker, amiloride, would favor the formation of peroxynitrous acid and thereby augment hyperpermeability induced by the NO. donor, SIN-1. METHODS: Caco-2BBe human intestinal epithelial monolayers were grown on permeable supports in bicameral chambers. The permeability of monolayers was assessed by measuring the transepithelial flux of fluorescein disulfonic acid (FS). RESULTS: Incubation of monolayers with SIN-1 increased permeability to FS. Adding amiloride augmented SIN-1-induced hyperpermeability. SIN-1 plus amiloride also decreased cellular adenosine triphosphate content and caused derangements of the actin-based cytoskeleton as demonstrated by fluorescence microscopy. Coincubation of monolayers with several free-radical or peroxynitrous acid scavengers (deferoxamine, mannitol, dimethyl sulfoxide, or ascorbate) ameliorated hyperpermeability induced by SIN-1 plus amiloride. CONCLUSIONS: Amiloride augments NO.-induced intestinal epithelial permeability, apparently by promoting the development of intracellular acidosis and thereby favoring the formation of the peroxynitrous acid.

Amiloride↗
PubMed2003

15N CIDNP study of formation and decay of peroxynitric acid: evidence for formation of hydroxyl radicals.

The reaction of nitrous acid with hydrogen peroxide leads to nitric acid as the only stable product. In the course of this reaction, peroxynitrous acid (ONOOH) and, in the presence of CO(2), a peroxynitrite-CO(2) adduct (ONOOCO(2)(-)) are intermediately formed. Both intermediates decompose to yield highly oxidizing radicals, which subsequently react with excess hydrogen peroxide to yield peroxynitric acid (O(2)NOOH) as a further intermediate. During these reactions, (15)N chemically induced dynamic nuclear polarization (CIDNP) effects are observed, the analysis of the pH dependency of which allows the elucidation of mechanistic details. The formation and decay of peroxynitric acid via free radicals NO(2)(*) and HOO(*) is demonstrated by the appearance of (15)N CIDNP leading to emission (E) in the (15)N NMR signal of O(2)NOOH during its formation and to enhanced absorption (A) during its decay reaction. Additionally, the (15)N NMR signal of the nitrate ion (NO(3)(-)) appears in emission at pH approximately 4.5. These observations are explained by proposing the intermediate formation of short-lived radical anions O(2)NOOH(*)(-) probably generated by electron transfer between peroxynitric acid and peroxynitrate anion, followed by decomposition of O(2)NOOH(*)(-) into NO(3)(-) and HO(*) and NO(2)(-) and HOO(*) radicals, respectively. The feasibility of such reactions is supported by quantum-chemical calculations at the CBS-Q level of theory including PCM solvation model corrections for aqueous solution. The release of free HO(*) radicals during decomposition of O(2)NOOH is supported by (13)C and (1)H NMR product studies of the reaction of preformed peroxynitric acid with [(13)C(2)]DMSO (to yield the typical "HO(*) products" methanesulfonic acid, methanol, and nitromethane) and by ESR spectroscopic detection of the HO(*) and CH(3)(*) radical adducts to the spin trap compound POBN in the absence and presence of isotopically labeled DMSO, respectively.

Journal Article↗
PubMed2006

15N CIDNP investigations of the peroxynitric acid nitration of L-tyrosine and of related compounds.

Peroxynitric acid (O2NOOH) nitrates L-tyrosine and related compounds at pH 2-5. During reaction with O2(15)NOOH in the probe of a 15N NMR spectrometer, the NMR signals of the nitration products of L-tyrosine, N-acetyl-L-tyrosine, 4-fluorophenol and 4-methoxyphenylacetic acid appear in emission indicating a nitration via free radicals. Nuclear polarizations are built up in radical pairs [15NO2* , PhO*]F or [15NO2* , ArH*+]F formed by diffusive encounters of 15NO2 with phenoxyl-type radicals PhO or with aromatic radical cations ArH*+. Quantitative 15N CIDNP investigations with N-acetyl-L-tyrosine and 4-fluorophenol show that the radical-dependent nitration is the only reaction pathway. During the nitration reaction, the 15N NMR signal of 15NO3- also appears in emission. This is explained by singlet-triplet transitions in radical pairs [15NO2* , 15NO3*]S generated by electron transfer between O2(15)NOOH and H15NO2 formed as a reaction intermediate. During reaction of peroxynitric acid with ascorbic acid, 15N CIDNP is again observed in the 15N NMR signal of 15NO3- showing that ascorbic acid is oxidized by free radicals. In contrast to this, O2(15)NOOH reacts with glutathione and cysteine without the appearance of 15N CIDNP, indicating a direct oxidation without participation of free radicals.

Ascorbic Acid↗
PubMed2000

Characterization of the Tetrahymena ribozyme folding pathway using the kinetic footprinting reagent peroxynitrous acid.

Large RNAs fold into complex structures which determine their biological activities. A full understanding of both RNA structure and dynamics will include the description of the pathways by which these structures are formed. Kinetic footprinting [Sclavi, B., et al. (1997) J. Mol. Biol. 266, 144-159] has been shown to be a powerful method for the study of dynamic processes involving RNA. Here we describe the use of a readily available reagent, peroxynitrous acid, as a kinetic footprinting tool for the study of RNA folding. Hydroxyl radicals generated from this reagent were used to footprint the Tetrahymena ribozyme during its magnesium-dependent folding-in agreement with synchroton X-ray footprinting [Sclavi, B., et al. (1998) Science 279, 1940-1943] and oligonucleotide/hybridization cleavage experiments [Zarrinkar, P. P., and Williamson, J. R. (1994) Science 265, 918-924], this work suggests an ordered, hierarchical folding pathway for the ribozyme. Several slow steps in the folding pathway were observed in the peroxynitrous acid footprinting, but none of these corresponded to the rate-determining step of folding. This suggests that the formation of the global, protected structure is followed by one or more slow local rearrangements to yield the final active structure. These studies illustrate the utility of peroxynitrous acid as a reagent for the elucidation of RNA folding pathways and the study of RNA dynamics.

Animals↗
PubMed2005

Chemical behavior of the biradicaloid (HO...ONO) singlet states of peroxynitrous acid. The oxidation of hydrocarbons, sulfides, and selenides.

Various high levels of theory have been applied to the characterization of two higher lying biradicaloid metastable singlet states of peroxynitrous acid. A singlet minimum (cis-2) was located that had an elongated O-O distance (2.17 A) and was only 12.2 kcal/mol [UB3LYP/6-311+G(3df,2p)+ZPVE] higher in energy than its ground-state precursor. A trans-metastable singlet (trans-2) was 10.9 kcal/mol higher in energy than ground-state HO-ONO. CASSCF(12,10)/6-311+G(d,p) calculations predict the optimized geometries of these cis- and trans-metastable singlets to be close to those obtained with DFT. Optimization of cis- and trans-2 within the COSMO solvent model suggests that both exist as energy minima in polar media. Both cis- and trans-2 exist as hydrogen bonded complexes with several water molecules. These collective data suggest that solvated forms of cis-2.3H(2)O and trans-2.3H(2)O represent the elusive higher lying biradicaloid minima that were recently (J. Am. Chem. Soc. 2003, 125, 16204) advocated as the metastable forms of peroxynitrous acid (HOONO). The involvement of metastable trans-2 in the gas phase oxidation of methane and isobutane is firmly established to take place on the unrestricted [UB3LYP/6-311+G(d,p)] potential energy surface (PES) with classical activations barriers for the hydrogen abstraction step that are 15.7 and 5.9 kcal/mol lower than the corresponding activation energies for producing products methanol and tert-butyl alcohol formed on the restricted PES. The oxidation of dimethyl sulfide and dimethyl selenide, two-electron oxidations, proceeds by an S(N)2-like attack of the heteroatom lone pair on the O-O bond of ground-state peroxynitrous acid. No involvement of metastable forms of HO-ONO was discernible.

Free Radicals↗
PubMed2003

Theoretical analysis of peroxynitrous acid: characterization of its elusive biradicaloid (HO...ONO) singlet states.

Various high levels of theory (DFT, QCISD, BD(TQ), and CASSCF) have been applied to the characterization of two higher-lying biradicaloid singlet states of peroxynitrous acid. A singlet minimum (cis-2) was located that had an elongated O-O distance of 2.17 A and was only 14.4 kcal/mol [UB3LYP/6-311+G(3df,2p)] higher in energy than its cis-peroxynitrous acid ground-state precursor. A trans metastable higher-lying singlet (trans-2) was 12.8 kcal/mol higher in energy than ground-state HO-ONO. Complete active space calculations [CAS(12,10)/6-311+G(d,p)] predicted the optimized geometries of these cis and trans metastable singlets to be quite close to those obtained with the DFT method. Geometry optimization of both cis- and trans-2 within the COSMO solvent model suggest that both exist as energy minima in polar media with elongated O-O distances of 2.14 and 2.09 A. Both cis- and trans-2 exist as hydrogen-bonded complexes with several water molecules. These collective data suggest that solvated forms of cis-2.3H2O and trans-2.3H2O represent the elusive higher-lying biradicaloid minima that have been previously advocated (J. Am. Chem. Soc. 1996, 118, 3125) as the metastable forms of peroxynitrous acid (HOONO*).

Free Radicals↗
PubMed2003

Direct determination of the Gibbs' energy of formation of peroxynitrous acid.

The kinetics of decomposition of peroxynitrous acid (ONOOH) was investigated in the presence of 0.1-0.75 M HClO(4) and at a constant ionic strength. The decay rate of ONOOH decreased in the presence of H(2)O(2), approaching a limiting value well below 75 mM H(2)O(2). It also decreased in the presence of relatively low [HNO(2)] but did not approach a lower limiting value, since ONOOH reacts directly with HNO(2). The latter reaction corresponds to a HNO(2)- and H(+)-catalyzed isomerization of ONOOH to nitrate, and its third-order rate constant was determined to be 520 +/- 30 M(-)(2) s(-)(1). The mechanism of formation of O(2)NOOH from ONOOH in the presence of H(2)O(2) was also scrutinized. The results demonstrated that in the presence of 0.1-0.75 M HClO(4) and 75 mM H(2)O(2) the formation of O(2)NOOH is insignificant. The most important finding in this work is the reversibility of the reaction ONOOH + H(2)O right harpoon over left harpoon HNO(2) + H(2)O(2), and its equilibrium constant was determined to be (7.5 +/- 0.4) x 10(-)(4) M. Using this value, the Gibbs' energy of formation of ONOOH was calculated to be 7.1 +/- 0.2 kcal/mol. This figure is in good agreement with the value determined previously from kinetic data using parameters for radicals formed during homolysis of peroxynitrite.

Journal Article↗
PubMedDate not supplied

Peroxynitrous acid--where is the hydroxyl radical?

Peroxynitrite is an inorganic toxin of physiological interest, formed from the diffusion-controlled reaction of superoxide and nitrogen monoxide with a rate constant of (1.6 +/- 0.3) x 10(10) M(-1) s(-1). On the basis of three experiments we conclude that homolysis of the O-O bond in peroxynitrous acid is unlikely: (1) the yield of nitrite from the decomposition of peroxynitrite shows a dependence on the peroxynitrite concentration and is lower than expected for homolysis; (2) the yield of [15N]nitrate from the reaction of [15N]nitrite with peroxynitrous acid predicted by homolysis does not correspond to that found experimentally, and (3) the reaction of peroxynitrous acid with monohydroascorbate does not yield ascorbyl radicals. Activation volumes determined from high-pressure kinetic studies are inconclusive.

Dehydroascorbic Acid↗
PubMed2000

Kinetic Footprinting of an RNA-Folding Pathway Using Peroxynitrous Acid.

Following footprints to discover a path is easier with peroxynitrous acid. The folding of the Tetrahymena ribozyme was studied using this readily available reagent to generate hydroxyl radicals for kinetic footprinting studies. The different domains of the ribozyme appear to assemble at different rates following an ordered, hierarchical pathway (see scheme).

Journal Article↗
PubMed1998

Free radical formation in the peroxynitrous acid (ONOOH)/peroxynitrite (ONOO-) system.

The rate constant of homolysis of peroxynitrite, ONOO-, into O2- and NO was determined to be 0.017 s-1 at 20 degrees C. In combination with other experimental data taken from the literature, this value yields the Gibbs free energy of formation of ONOO-, delta f G o(ONOO-) = 16.6 kcal/mol. On the basis of this result, we conclude that peroxynitrous acid homolyzes to yield nitrogen dioxide (NO2) and hydroxyl (OH) free radicals and derive delta f G o(ONOOH) = 7.7 kcal/mol. The rate constant of the reaction between NO and ONOO- was found to be 5 x 10(-)2 M-1 s-1 at most. The implications of the two homolysis reactions are discussed.

Free Radicals↗