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Anatomy and histology of the brain and sense organs of the Antarctic eel cod Muraenolepis microps (Gadiformes; Muraenolepididae).

Brain regions, cranial nerves, and sense organs in Muraenolepis microps, an Antarctic gadiform fish, were examined to determine which features could be attributed to a gadiform ancestry and which to habitation of Antarctic waters. We found that the central nervous system and sense organs are well developed, showing neither substantial regression nor hypertrophy. A detailed drawing of the brain and cranial nerves is provided. The rostral position of the olfactory bulbs and telencephalic size and lobation are common for the order. The optic tectum and corpus cerebelli are smaller than in most other gadiforms. The shape of the corpus cerebelli is not distinctive among gadiforms. The lateral line region is moderately well-developed, but not hypertrophied to the extent seen in deep-sea gadiforms. As is the case in gadids possessing barbels and elongated pelvic rays, Muraenolepis has well-developed facial lobes, although these are smaller and more laterally positioned. The vagal lobes are deeply placed in the rhombencephalon and project into the fourth ventricle. The brain of Muraenolepis resembles that of a phyletically derived gadoid, especially a phycid, more than it resembles the brain of a phyletically basal macrourid. Two histological features of the diencephalon of Muraenolepis appear to be unique among gadiforms: a well-organized thalamic central medial nucleus and subependymal expansions. Muraenolepis has a pure rod retina like many deep-sea species but lacks the superimposed layers of rod outer segments. The histology of the nonvisual sense organs, especially the olfactory and external taste systems, are well-developed in Muraenolepis but not hypertrophied. We relate our findings to what is known about neural morphology in other gadiforms and in phyletically distant notothenioids and liparids that are sympatric with Muraenolepis on the Antarctic shelf. The only feature that reflects an Antarctic existence is the diencephalic subependymal expansions, which within notothenioids mirror the habitation of cold waters and have been found in every Antarctic species examined to date. Although the waters of the Antarctic shelf are cold, dark, and deep, brain and sense organ morphology in Muraenolepis are remarkably free of extreme specialization.

Animals↗

Characterization of mitochondrial ribosomal RNA genes in gadiformes: sequence variations, secondary structural features, and phylogenetic implications.

Secondary structure features of mitochondrial ribosomal RNAs (mt-rRNAs) of bony fishes were investigated by a DNA sequence alignment approach. The small subunit (SSU) and large subunit (LSU) mt-rRNA genes were found to contain several additional variable regions compared to their mammalian counterparts. Fish mt-LSU rRNA genes were found to be longer than the mammalians due to increased length of some of the variable regions. The 5' and 3' ends of Atlantic cod mt-rRNAs were precisely mapped. The 3' ends of mt-SSU rRNAs were found to be homogenous and mono-adenylated, whereas that of the mt-LSU rRNAs were heterogenous and oligo-adenylated. The 5' ends of mt-SSU rRNAs appeared to be heterogenous, corresponding to the presumed first and second positions of the gene. Sequences of the central domain and the D-domain of the mt-SSU and mt-LSU rRNA genes, respectively, were determined and characterized for 11 gadiform species (representing the families Gadidae, Lotidae, Ranicipitidae, Merlucciidae, Phycidae, and Macrouridae) and one Lophiidae species. Detailed secondary structure models of the RNA regions are presented for the Atlantic cod (Gadus morhua) and Roundnose grenadier (Coryphaeonides rupestris). Saturation plots revealed that DNA nucleotide positions corresponding to unpaired RNA regions become saturated with transitions at sequence divergence levels about 0.15. Phylogenetic analyses revealed some aspects of gadiform relationships. Gadidae was identified as the most derived of the gadiform families. Lotidae was found to be the family closest related to Gadidae, and Ranicipitidae was also recognized as a derived gadiform taxon.

Animals↗

Quantitative relationship between trimethylamine oxide aldolase activity and formaldehyde accumulation in white muscle from gadiform fish during frozen storage.

The accumulation of formaldehyde and the resulting deterioration of seafood products during frozen storage are primarily caused by the enzymatic activity of trimethylamine oxide aldolase (TMAOase). A screening of muscle samples from 24 species showed TMAOase activity in only the nine gadiform species that were analyzed. Enzyme activities in the major white muscle of gadiform fish showed large variations between species as well as between individuals. A frozen storage experiment showed a similarly large variation in the rate of formaldehyde accumulation, which could be accounted for by the endogenous white muscle in situ TMAOase activity. This TMAOase activity also correlated with the rate of insolubilization of otherwise high ionic strength soluble protein. A simple model describing the accumulation of free formaldehyde during frozen storage of gadiform fish is proposed. The model is based on a storage time-dependent decay of substrate-saturated white muscle TMAOase activity.

Aldehyde-Lyases↗

Molecular phylogenetics of gadidae and related gadiformes based on mitochondrial DNA sequences.

Mitochondrial DNA sequences of selected regions of the small subunit and large subunit ribosomal RNAs and cytochrome b genes were analyzed for 10 gadid species, representing 8 genera within Gadidae, and 10 species representing 5 other gadiform families. Phylogenetic analyses revealed that Gadiculus is the most basal gadid genus, and that Trisopterus and Micromesistius constitute a relatively basal clade. Lotidae was identified as the family most closely related to Gadidae. Estimation of divergence times indicated that the most ancient Gadidae split between Gadiculus and the remaining gadid genera occurred about 20 million years ago. The clade including the most recent species (Gadus, Boreogadus, Merlangius, Melanogrammus, and Pollachius) diverged from the Trisopterus/Micromesistius clade approximately 12 million years ago.

Animals↗

Round and pointed-head grenadier fishes (Actinopterygii: Gadiformes) represent a single sister group: evidence from the complete mitochondrial genome sequences.

The gene order of mitochondrial genomes (mitogenomes) has been employed as a useful phylogenetic marker in various metazoan animals, because it may represent uniquely derived characters shared by members of monophyletic groups. During the course of molecular phylogenetic studies of the order Gadiformes (cods and their relatives) based on whole mitogenome sequences, we found that two deep-sea grenadiers (Squalogadus modificatus and Trachyrincus murrayi: family Macrouridae) revealed a unusually identical gene order (translocation of the tRNA(Leu (UUR))). Both are members of the same family, although their external morphologies differed so greatly (e.g., round vs. pointed head) that they have been placed in different subfamilies Macrouroidinae and Trachyrincinae, respectively. Additionally, we determined the whole mitogenome sequences of two other species, Bathygadus antrodes and Ventrifossa garmani, representing a total of four subfamilies currently recognized within Macrouridae. The latter two species also exhibited gene rearrangements, resulting in a total of three different patterns of unique gene order being observed in the four subfamilies. Partitioned Bayesian analysis was conducted using available whole mitogenome sequences from five macrourids plus five outgroups. The resultant trees clearly indicated that S. modificatus and T. murrayi formed a monophyletic group, having a sister relationship to other macrourids. Thus, monophyly of the two species with disparate head morphologies was corroborated by two different lines of evidence (nucleotide sequences and gene order). The overall topology of the present tree differed from any of the previously proposed, morphology-based phylogenetic hypotheses.

Animals↗

Bothriocephalus gadellus n. sp. (Cestoda: Bothriocephalidae) from the beardless codling Gadella imberbis (Vaillant) (Moridae) in the southwestern Gulf of Mexico, with a review of species of Bothriocephalus Rudolphi, 1808 reported from gadiform fishes.

Bothriocephalus gadellus n. sp. is described from the intestine of the beardless codling Gadella imberbis (Gadiformes: Moridae) from the southwestern Gulf of Mexico. It resembles B. scorpii, the type-species of Bothriocephalus, and B. manubriformis, the only species of the genus reported from the Gulf of Mexico. B. gadellus n. sp. differs from both species in having four excretory canals on each side of the proglottid (three per side in B. scorpii; two per side anastomosing to form an extensive plexus throughout the medulla in B. manubriformis ), 24-33 testes per proglottid (30-60 in B. scorpii; 60-100 in B. manubriformis), a total length of 31-47 mm (32-950 mm in B. scorpii; 130-1,000 mm in B. manubriformis), and a seminal receptacle and wing-like expansions on each proglottid (absent in B. scorpii and B. manubriformis), as well as lacking two sets of reproductive organs per proglottid (present in B. scorpii) and a vagina with a bulbous sphincter near the opening (present in B. manubriformis). An amendment to the generic diagnosis of Bothriocephalus might be warranted if other species of this genus are found to possess a seminal receptacle. B. gadellus n. sp. appears to be like those species of Bothriocephalus that can utilise two intermediate hosts (copepod and fish). B. ellipticus and B. neglectus are designated as species inquirendae. This is the first report of a cestode from a morid fish in the Gulf of Mexico, and the first report of a parasite from a species of Gadellus.

Animals↗

The deep-sea teleost cornea: a comparative study of gadiform fishes.

The corneal structure of three deep-sea species of teleosts (Gadiformes, Teleostei) from different depths (250-4000 m) and photic zones are examined at the level of the light and electron microscopes. Each species shows a similar but complex arrangement of layers with a cornea split into dermal and scleral components. The dermal cornea comprises an epithelium overlying a basement membrane and a dermal stroma with sutures and occasional keratocytes. Nezumia aequalis is the only species to possess a Bowman's layer, although it is not well-developed. The scleral cornea is separated from the dermal cornea by a mucoid layer and, in contrast to shallow-water species, is divided into three main layers; an anterior scleral stroma, a middle or iridescent layer and a posterior scleral stroma. The iridescent layer of collagen and intercalated cells or cellular processes is bounded by a layer of cells and the posterior scleral stroma overlies a Desçemet's membrane and an endothelium. In the relatively shallow-water Microgadus proximus, the keratocytes of the dermal stroma, the cells of the iridescent layer and the endothelial cells all contain aligned endoplasmic reticulum, which may elicit an iridescent reflex. No alignment of the endoplasmic reticulum was found in N. aequalis or Coryphanoides (Nematonurus) armatus. The relative differences between shallow-water and deep-sea corneas are discussed in relation to the constraints of light, depth and temperature.

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Identification of commercial fish species belonging to the orders pleuronectiformes and gadiformes: library of isoelectric focusing patterns.

Isoelectric focusing in polyacrylamide gel was used to establish an identification archive of fish species belonging to the orders Pleuronectiformes, or flat fish, and Gadiformes, or gadoid fish. The 2 orders include species of different commercial value and interest that are frequently requested in European fish markets, but are susceptible to substitution either because they are morphologically similar or because they arrive on the markets already filleted or sliced. The sarcoplasmic protein profiles are species-specific and reproducible. The use of densitometry and image analysis coupled with a simple computer program overcomes the subjective evaluation of the patterns, making it possible to identify species correctly.

Animals↗

Kudoa alliaria in flesh of Argentinian hoki Macruronus magellanicus (Gadiformes; Merlucciidae).

Myxozoans of the genus Kudoa are widespread parasites of marine fishes and primarily infect the body musculature of their hosts. Although Kudoa species are not usually associated with host mortality, some do form macroscopic cysts in the tissue and some are associated with post mortem tissue degradation. This is of concern to commercial fisheries as fillets may be unmarketable due to these infections. Because different species of Kudoa have different effects on their hosts, it is important to correctly identify species with epidemiological relevance, distinguishing those that are benign from those that are associated with these detrimental effects. Using morphological and molecular analyses, we identified K. alliaria infecting Argentinian hoki Macruronus magellanicus. Comparisons of the small subunit ribosomal DNA sequence revealed that K. alliaria is genetically very similar to K. rosenbuschi. Furthermore, there is significant overlap in myxospore dimensions between descriptions of these 2 Kudoa species as well as those of other Patagonian fishes. Thus, without careful examination of the myxospore dimensions, it may be difficult to identify these species on a routine basis. It is critical to accurately identify K. alliaria as, unlike K. rosenbuschi, it is not associated with tissue degradation. Ambiguities in some species descriptions highlight the need for thorough morphological analyses accompanied by molecular comparisons to clarify the species boundaries between Kudoa parasites of Patagonian fishes.

Animals↗

Notes on Galápagos grenadiers (Pisces, Gadiformes, Macrouridae), with the description of a new species of Coryphaenoides.

Two unusual specimens of the grenadier genus Coryphaenoides were collected by the deep-submersible vehicle Johnson Sea-Link off the Galápagos. Unlike any other member of the genus, the snout in these specimens was rounded, non-protruding, naked anteriorly and ventrally, with no tubercular scales marking the terminal and lateral angles. They are herein described as Coryphaenoides gypsochilus. Additional specimens of grenadiers were procured by the Johnson Sea-Link, including the second and third specimens of Nezumia ventralis and the first record of Caelorinchus canus from these waters. Three species and one subspecies of Galápagos grenadiers are endemic.

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A new species of Nezumia (Gadiformes: Macrouridae) from Fieberling Guyot, eastern North Pacific Ocean.

A new species of the macrourine genus Nezumia is described from specimens collected from the crest of Fieberling Guyot in the eastern North Pacific Ocean. The new species is distinguishable from all other Nezumia species chiefly on the basis of a high number of pelvic fin rays, a relatively high number of first dorsal fin soft rays, a steep blunt snout lacking scales ventrally, a relatively weak suborbital ridge, and a moderately long, thin barbel. Although possibly endemic to the Baja California Seamount Province, the new species appears to lack close relatives among the other Nezumia species of the eastern North Pacific Ocean. It might have arrived there either from a disjunct Tethyan distribution, thus retaining close relatives among the Atlantic Ocean species of Nezumia, or by way of stepping-stone dispersal from the Indo-west Pacific Ocean.

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Quantitative analyses of postembryonic hair cell addition in the otolithic endorgans of the inner ear of the European hake, Merluccius merluccius (Gadiformes, Teleostei).

Bony fishes add sensory hair cells to the saccule and lagena of the ear for at least several years after hatching. However, it is not known whether hair cell proliferation occurs for the whole lifetime of an animal, whether proliferation occurs in all endorgans of the ear, or whether the rate of proliferation is the same in all of the endorgans. To obtain answers to these questions, the extent of postembryonic hair-cell proliferation was determined in the saccule, lagena, and utricle of the ear in the European hake, Merluccius merluccius, for fish ranging from 7 to 75 cm in total length (6 months to 9 years of age). Results demonstrated that hair-cell addition continued throughout this period in all three otic endorgans, although endorgan size was proportionally greatest in smaller animals. Of the three endorgans, cell addition was greatest in the saccule. Moreover, far more cells were added to the caudal end of the saccule than to the rostral end. Each saccule of the largest hake had over 900,000 hair cells. It is estimated that each saccule adds approximately 110,000 new hair cells each year (or 302 cells/day) over the life span of the fish studied. A significant number of small ciliary bundles, thought to represent newly proliferated hair cells, was found throughout each endorgan, and the number of such bundles declined as the rate of hair cell proliferation decreased. The results demonstrate that extensive proliferation occurs in all three otolithic endorgans of the ears in a fish and that such proliferation continues for virtually the whole life of the animal. The functional significance of this addition is not known.

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Molecular phylogenetic relationships of the deep-sea fish genus Coryphaenoides (Gadiformes: Macrouridae) based on mitochondrial DNA.

In order to characterize the phylogenetic relationship and deep-sea adaptation process of the deep-sea fish genus Coryphaenoides, the nucleotide sequences of the mitochondrial (mt) 12 S rRNA and COI gene sequences for seven Coryphaenoides species were analyzed. Our molecular phylogenetic tree shows a new arrangement of seven Coryphaenoides species, which form two distinct groups, abyssal and nonabyssal species, and differs from the results of previous taxonomic studies. Using the mutation rate of mitochondrial genes, the divergence time between abyssal and nonabyssal Coryphaenoides was found to be 3.2-7.6 million years ago. Our study suggests that hydraulic pressure plays an important role in the speciation process in the marine environment.

Adaptation, Physiological↗

Sequence Characterization of a Unique Intergenic Spacer in Gadiformes Mitochondrial DNA.

: The nucleotide sequences of intergenic spacers located between the tRNA(Thr) and tRNA(Pro) genes in mitochondrial DNA of cod fishes (order Godiformes) were determined. Spacers from eight species representing two families of cod fishes were analyzed and found to vary in size from 25 to 99 bp. Each spacer sequence contains one or two copies of a conserved 17-bp motif. Four to five central nucleotides of this motif constitute a substitutional hot spot as observed from interspecific and intraspecific comparisons. The substitution rate of the spacer is approximately twice that of the variable part I of the mitochondrial DNA control region, making this sequence region interesting as a molecular marker in population studies or stock assessments of cod fishes. We propose that the spacer originated in a duplication event and evolved into a functional domain, perhaps by binding regulatory proteins.

Journal Article↗

Interrelationships of the subgenera of Coryphaenoides (Teleostei: Gadiformes: Macrouridae): synthesis of allozyme, peptide mapping, and DNA sequence data.

DNA sequences of the 12s rRNA mitochondrial gene from 12 species key to the question of the monophyly of the deep-sea fish genus Coryphaenoides (Macrouridae) were analyzed phylogenetically using maximum parsimony and maximum likelihood. The results were compared with those of three previous studies in which allozyme, peptide mapping, and DNA sequence data were similarly analyzed. The allozyme and DNA sequence data suggested that the largest subgenus (Coryphaenoides), which contained most of the species inhabiting continental slopes between approximately 600 and 2000m depth, is monophyletic. Two of the three subgenera containing the species inhabiting abyssal ocean basins below approximately 2000m together formed a sister group to subgenus Coryphaenoides. The macrourids of the abyssal basins and those of the continental slopes thus appear to have experienced separate radiations from a common ancestor.

Animals↗

The complete mitochondrial genome of the whiting, Merlangius merlangus and the haddock, Melanogrammus aeglefinus: a detailed genomic comparison among closely related species of the Gadidae family.

We determined the first complete mitochondrial DNA (mtDNA) sequences for the whiting (Merlangius merlangus, family Gadidae, order Gadiformes) and the haddock (Melanogrammus aeglefinus, family Gadidae, order Gadiformes). The entire mitogenomes were amplified and sequenced by primer walking using newly designed specific internal primers. Lengths were 16,569 and 16,585 bases for whiting and haddock respectively, lengths which lie within the range of previously reported gadiform sequences from Atlantic cod (Gadus morhua, 16,696 bases) and walleye pollock (Theragra chalcogramma, 16,570 bases). Gene arrangement in both species conformed to the order seen in most vertebrate mitochondrial genomes. We identified a long intergenic spacer located between the tRNA(Thr) and tRNA(Pro) genes (of 100 and 70 bp long for whiting and haddock, respectively), as previously described for other species of the order Gadiformes. Using nucleotide and amino acid divergence data of four complete gadoid mitogenomes (M. merlangius, M. aeglefinus, G. morhua and T. chalcogramma), we examined in detail the relative mtDNA mutation patterns across genes and among Gadidae species and tested for the performance of each protein-coding, transfer RNA and ribosomal RNA gene in depicting the expected phylogeny among the four species, as compared with the whole genome dataset. This comparison may be particularly useful in phylogenetic analyses of such a diverse fish family, as well as for the understanding of the patterns of nucleotide substitution of the mtDNA at low levels of divergence.

Animals↗

Anisakid parasites of two forkbeards (Phycis blennoides and Phycis phycis) from the eastern Mediterranean coasts in Tunisia.

Two gadiform species with a successive bathymetric and an ecological and economical importance in the Mediterranean fishing industry, Phycis blennoides and Phycis phycis, were selected for the present study. A total of 592 fresh specimens belonging to the Gadiformes genus were obtained from local commercial fisheries. The investigation was centred on anisakid parasites of 272 specimens of the greater forkbeard (P. blennoides) and 320 of the forkbeard (P. phycis) captured off the Mediterranean coasts of Tunisia (eastern Mediterranean Sea). Four species of nematodes were identified: Anisakis simplex s.1., Anisakis physeteris, Hysterothylacium aduncum and Hysterothylacium fabri. The total prevalence was 53.75% in the forkbeard and 51.47% in the greater forkbeard. The highest values of prevalence (38.75%, 2-14), mean intensity (6.74+/-3.4) and mean abundance (2.61) were all obtained for H. fabri L4 in the forkbeard. The most frequent parasite in the greater forkbeard was H. aduncum L3 with 32.35% (1-3) prevalence and values of 1.21+/-0.58 and 0.39 for mean intensity and mean abundance, respectively. The infestation parameters were also analysed according to the host length, and prevalence was highest in P. blennoides longer than 35 cm in respect of all anisakid species. Whilst in P. phycis, the highest prevalence, conditioned by H. fabri parasitisation, was found in fish with length reaching a maximum of more than 40 cm. When the data were grouped seasonally, clear patterns were observed for P. blennoides and P. phycis species, with prevalence and mean intensity of all the anisakid species peaking in spring and summer.

Animals↗