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At least 19 recordsLinked to original sources
PubMed2025

A chromosome-level genome assembly and annotation of Cercis chuniana (Fabaceae).

The genus Cercis L., at the base of the subfamily Cercidoideae of Fabaceae, is known for its ecological adaptability and significant medicinal, ornamental, and economic value. However, the lack of a high-quality genome hinders the understanding of the evolution of Cercis and Fabaceae. In this study, we present a chromosome-level genome of Cercis chuniana by combining Illumina short reads, PacBio HiFi long reads, and Hi-C data. The final genome size is 355.53 Mb, consisting of 12 contigs with a N50 of 42.34 Mb. Notably, 344.24 Mb, corresponding to 96.82% of the genome, was anchored to seven chromosomes. The assembly comprises 24.83% repetitive sequences, including 19.32% long terminal repeats. Additionally, a total of 33,837 protein-coding genes were predicted in the genome, with 32,709 (96.67%) genes successfully annotated. The high-quality genome assembly of C. chuniana not only bridges the existing gap in genomic data and offers important resources for molecular studies of this species, but also provides essential insights for future studies on speciation, functional and comparative genomics within the Fabaceae family.

Genome, Plant↗
PubMed2005

Cluster roots of Leucadendron laureolum (Proteaceae) and Lupinus albus (Fabaceae) take up glycine intact: an adaptive strategy to low mineral nitrogen in soils?

BACKGROUND AND AIMS: South African soils are not only low in phosphorus (P) but most nitrogen (N) is in organic form, and soil amino acid concentrations can reach 2.6 g kg(-1) soil. The Proteaceae (a main component of the South African Fynbos vegetation) and some Fabaceae produce cluster roots in response to low soil phosphorus. The ability of these roots to acquire the amino acid glycine (Gly) was assessed. METHODS: Uptake of organic N as 13C-15N-Gly was determined in cluster roots and non-cluster roots of Leucadendron laureolum (Proteaceae) and Lupinus albus (Fabaceae) in hydroponic culture, taking account of respiratory loss of 13CO2. KEY RESULTS: Both plant species acquired doubly labelled (intact) Gly, and respiratory losses of 13CO2 were small. Lupin (but not leucadendron) acquired more intact Gly when cluster roots were supplied with 13C-15N-Gly than when non-cluster roots were supplied. After treatment with labelled Gly (13C : 15N ratio = 1), lupin cluster roots had a 13C : 15N ratio of about 0.85 compared with 0.59 in labelled non-cluster roots. Rates of uptake of label from Gly did not differ between cluster and non-cluster roots of either species. The ratio of C : N and 13C : 15N in the plant increased in the order: labelled roots < rest of the root < shoot in both species, owing to an increasing proportion of 13C translocation. CONCLUSIONS: Cluster roots of lupin specifically acquired more intact Gly than non-cluster roots, whereas Gly uptake by the cluster and non-cluster roots of leucadendron was comparable. The uptake capacities of cluster roots are discussed in relation to spatial and morphological characteristics in the natural environment.

Carbon Radioisotopes↗
PubMed2001

Nutritional potential of biochemical components in Galactia longifolia Benth. (Fabaceae).

Seeds of Galactia longifolia Benth. (Fabaceae), locally known as Kaattukollu in Tamil language, used as food by Malayali tribals in the Kolli hills of Namakkal District, Tamil Nadu in South India were analysed for proximate composition, total (true) seed proteins, amino acid composition, fatty acid composition, minerals and antinutritional factors. Crude protein, crude fat, ash and nitrogen free extractives constitute 25.56%, 6.18%, 5.12% and 56.15%, respectively. The caloric value of 100 g dry matter of seed material is 1,601 KJ. The essential amino acids, tryptophan, leucine + isoleucine, arginine and threonine are present relatively in large quantities. The unsaturated fatty acids constitute more than 60%. The seeds are very rich in potassium, magnesium, calcium and phosphorus. Antinutritional factors such as total free phenols, tannins, L-DOPA, hydrogen cyanide and phytic acid is present in minute quantities. The seed meal is consumed after eliminating all the antinutritional factors using the conventional method of soaking seeds in water, boiling with water and decanting for four times by Malayali tribals.

Amino Acids↗
PubMed2005

Wood growth patterns of Macrolobium acaciifolium (Benth.) Benth. (Fabaceae) in Amazonian black-water and white-water floodplain forests.

Macrolobium acaciifolium (Benth.) Benth. (Fabaceae) is a dominant legume tree species occurring at low elevations of nutrient-poor black-water (igapó) and nutrient-rich white-water floodplain forests (várzea) of Amazonia. As a consequence of the annual long-term flooding this species forms distinct annual tree rings allowing dendrochronological analyses. From both floodplain types in Central Amazonia we sampled cores from 20 large canopy trees growing at identical elevations with a flood-height up to 7 m. We determined tree age, wood density (WD) and mean radial increment (MRI) and synchronized ring-width patterns of single trees to construct tree-ring chronologies for every study site. Maximum tree age found in the igapó was more than 500 years, contrary to the várzea with ages not older than 200 years. MRI and WD were significantly lower in the igapó (MRI=1.52+/-0.38 mm year(-1), WD=0.39+/-0.05 g cm(-3)) than in the várzea (MRI=2.66+/-0.67 mm year(-1), WD=0.45+/-0.03 g cm(-3)). In both floodplain forests we developed tree-ring chronologies comprising the period 1857-2003 (n=7 trees) in the várzea and 1606-2003 (n=13 trees) in the igapó. The ring-width in both floodplain forests was significantly correlated with the length of the terrestrial phase (vegetation period) derived from the daily recorded water level in the port of Manaus since 1903. In both chronologies we found increased wood growth during El Niño events causing negative precipitation anomalies and a lower water discharge in Amazonian rivers, which leads to an extension of the terrestrial phase. The climate signal of La Niña was not evident in the dendroclimatic proxies.

Age Factors↗
PubMed2004

Molecular evidence for the inclusion of the Korean endemic genus " Echinosophora" in Sophora (Fabaceae), and embryological features of the genus.

Although Echinosophora Nakai has been known as a monotypic and endemic genus of Papillionoideae of Fabaceae in Korea, it has been controversial whether it is distinct from or merged with Sophora. To resolve this matter, we conducted molecular phylogenetic analyses using nucleotide sequence data from the plastid rbcL gene and trnL (UAA) intron. Parsimony analysis, using a total of 53 taxa of the Papillionoideae (including E. koreensis [Nakai] Nakai and several species of Sophora and related genera) and using 20 taxa of Caesalpinioideae and Mimosoideae as outgroups, showed that, although the examined species of Sophora are split into two clades, E. koreensis formed a common clade with S. tomentosa (the type species of the genus) and S. flavescens. E. koreensis therefore should be treated as S. koreensis Nakai, and the generic name Echinosophora be eliminated. We also investigated the embryology of S. koreensis (= E. koreensis) and S. flavescens and found that no differences existed between them. Our molecular study, like other studies, strongly suggested that Sophora is polyphyletic. In this study we presented a summary of embryological features of the core Sophora for future critical comparison with related and unrelated taxa.

DNA, Plant↗
PubMed2006

Vasodilatory and hypoglycaemic effects of two pyrano-isoflavone extractives from Eriosema kraussianum N. E. Br. [Fabaceae] rootstock in experimental rat models.

Zulu traditional health practitioners have claimed that the roots of Eriosema kraussianum N. E. Br. (Fabaceae) and other Eriosema species (Zulu indigenous umbrella name of "uBangalala") are effective remedies for the treatment of erectile dysfunction (ED) and/or impotence. In order to scientifically appraise the significance and contribution of Eriosema kraussianum to its ethnomedical use as "uBangalala" and "VIAGRA substitute", the present study was undertaken to investigate the vasodilatory and hypoglycaemic properties of the two main bioactive chemical compounds obtained from E. kraussianum, in experimental rat models, using sildenafil citrate (VIAGRA) as the reference drug for comparison. The two E. kraussianum rootstock constituents (K1 and K2, 20-80 mg/kg p.o.) caused dose-dependent and significant (P<0.05-0.001) hypoglycaemia in rats. Relatively low to high concentrations of the plant's extracts (K1 and K2, 100-2000 microg/ml) always produced biphasic effects on rat isolated portal veins. K1- and K2-provoked responses of the isolated portal veins always consisted of concentration-related initial transient, but significant (P<0.05), contractions of the venous muscle preparations, followed by secondary, longer-lasting, highly significant (P<0.01-0.001) relaxations of the venous muscle strips. Sildenafil citrate (VIAGRA, 5-100 microg/ml) always produced concentration-related and highly significant relaxations of the rat isolated portal veins. Unlike K1 and K2 (20-80 mg/kg p.o.), however, sildenafil citrate (VIAGRA, 100 mg/kg p. o.) only caused slight and insignificant (P>0.05) reductions in the blood glucose levels of the experimental animals used. On the other hand, glibenclamide (10 mg/kg p.o.) induced highly significant (P<0.05-0.001), marked reductions in the blood glucose concentrations of the rats. The findings of this laboratory animal study indicate that the two hydro-ethanol extractives of E. kraussianum (K1 and K2) possess hypoglycaemic and secondary, vasorelaxant effects in the experimental paradigms used.

Animals↗
PubMed1999

Chemical analysis and nutritional assessment of Teramnus labialis (L.) Spreng. (Fabaceae).

Seeds of Teramnus labialis (L.) Spreng. (Fabaceae), used as food by Malayali tribals in the Kollihills of Salem District, Tamil Nadu in South India, were investigated for their nutritional value. These seeds were analyzed for proximate composition, total (true) seed proteins, seed protein fractions, amino acid composition, fatty acid composition, minerals and antinutritional factors. Crude protein, crude fat, ash, and nitrogen free extracts constituted 22.86%, 6.10%, 4.62%, and, 58.15%, respectively, of the seed weight. The caloric value of 100 g dry matter of seed material was 378.94 kcal. The essential amino acids lysine, leucine + isoleucine, arginine, valine and histidine were present in relatively large quantities. The unsaturated fatty acids constituted more than 60% of the crude fat. Concentrations of minerals such as potassium, magnesium, calcium, and, phosphorus were high. Antinutritional factors such as total free phenols, tannins, L-DOPA, hydrogen cyanide and phytic acid were present in minute quantities. These antinutritional factors are potentially eliminated using the conventional method of soaking the seeds in water, boiling with water and decanting prior to consumption.

Amino Acids↗
PubMed2001

Association of carbon disulfide with plants in the family Fabaceae.

We examined 40 taxa from nine genera within the subfamily Mimosoideae; 29 (73%) from six genera produced carbon disulfide (CS2). In addition, 19 of 40 taxa (48%) produced carbonyl sulfide (OCS). Of nine mimosoid taxa that produced CS2, all possessed a djenkolic acid and a cysteine lyase. Of three mimosoid taxa that did not produce CS2, two lacked a cysteine lyase and one lacked both a lyase and a djenkolic acid. Of 16 taxa from 14 genera from the other two subfamilies of the Fabaceae, the Caesalpinioideae and Papilionoideae, none produced CS2. The results suggest that CS2 production is common in the Mimosoideae and uncommon in the Caesalpinioideae and Papilionoideae and that plants in the Mimosoideae that do produce CS2 must possess both a djenkolic acid and a cysteine lyase for this production to occur.

Carbon Disulfide↗
PubMed2003

Pollen dispersal of tropical trees (Dinizia excelsa: Fabaceae) by native insects and African honeybees in pristine and fragmented Amazonian rainforest.

Tropical rainforest trees typically occur in low population densities and rely on animals for cross-pollination. It is of conservation interest therefore to understand how rainforest fragmentation may alter the pollination and breeding structure of remnant trees. Previous studies of the Amazonian tree Dinizia excelsa (Fabaceae) found African honeybees (Apis mellifera scutellata) as the predominant pollinators of trees in highly disturbed habitats, transporting pollen up to 3.2 km between pasture trees. Here, using microsatellite genotypes of seed arrays, we compare outcrossing rates and pollen dispersal distances of (i) remnant D. excelsa in three large ranches, and (ii) a population in undisturbed forest in which African honeybees were absent. Self-fertilization was more frequent in the disturbed habitats (14%, n = 277 seeds from 12 mothers) than in undisturbed forest (10%, n = 295 seeds from 13 mothers). Pollen dispersal was extensive in all three ranches compared to undisturbed forest, however. Using a twogener analysis, we estimated a mean pollen dispersal distance of 1509 m in Colosso ranch, assuming an exponential dispersal function, and 212 m in undisturbed forest. The low effective density of D. excelsa in undisturbed forest (approximately 0.1 trees/ha) indicates that large areas of rainforest must be preserved to maintain minimum viable populations. Our results also suggest, however, that in highly disturbed habitats Apis mellifera may expand genetic neighbourhood areas, thereby linking fragmented and continuous forest populations.

Alleles↗
PubMed2006

Activity of isoflavans of Dalea aurea (Fabaceae) against the opportunistic ameba naegleria fowleri.

One new and one known isoflavan, 3 S(+)-7-methoxymanuifolin K (1) and manuifolin K (2), respectively, were isolated from methanolic extracts of Dalea aurea (Fabaceae). Isoflavans 1 and 2 exhibited significant in vitro activity against the ameba Naegleria fowleri, an organism responsible for an infrequent but rapidly fatal form of primary amebic meningoencephalitis (PAM). At concentrations of 30 microM, both 1 and 2 caused growth inhibition of N. fowleri at a level comparable to amphotericin B (at 0.1 microM), the currently preferred treatment for this disease. Over a seven-day growth period, 1 and 2 (30 microM) exhibited superior growth inhibition of N. fowleri than amphotericin B after day 4. Isoflavan 2 was evaluated in a mouse model of PAM at a dose of 25 mg/kg/day for five days. While amphotericin B (2.5 mg/kg/day) offered 12.5 % protection of the mice, compound 2 did not protect the mice from PAM infection compared to controls.

Amebicides↗
PubMed2004

Differentiation in a geographical mosaic of plants coevolving with ants: phylogeny of the Leonardoxa africana complex (Fabaceae: Caesalpinioideae) using amplified fragment length polymorphism markers.

Comprising four allopatric subspecies that exhibit various grades of ant-plant interactions, from diffuse to obligate and symbiotic associations, the Leonardoxa africana complex (Fabaceae, Caesalpinioideae) provides a good opportunity to investigate the evolutionary history of ant-plant mutualisms. A previous study of the L. africana complex based on chloroplast DNA noncoding sequences revealed a lack of congruence between clades suggested by morphological and plastid characters. In this study, we analysed phylogenetic relationships within the L. africana complex using a Bayesian probability approach on amplified fragment length polymorphism markers. The results reported permit partial validation of the four subspecies of L. africana previously defined by morphological and ecological markers. Incongruences between phylogenies based on chloroplast DNA and amplified fragment length polymorphism markers are discussed in the light of morphological and ecological data, and confronted with hypotheses of convergence, lineage sorting and introgression.

Analysis of Variance↗
PubMed2001

Unravelling the phylogeny of tetraploid Vicia amoena (Fabaceae) and its diploid relatives using chromosomal landmarks.

The chromosomal sites of 5S and 45S rDNA genes were revealed by fluorescence in situ hybridisation, and used as landmarks to resolve the ambiguous taxonomic status of the tetraploid Vicia amoena var. amoena (Fabaceae). Comparisons of the number and location of rDNA loci in V. amoena var. sericea, V. pseudorobus, V. dumetorum, V. pisiformis and V. cracca confirmed that V. amoena var sericea, or a closely related diploid, was a likely progenitor of the tetraploid. However, the tetraploid contains chromosomes bearing rDNA loci which are probably derived from another species, such as V. pseudorobus, suggesting that it is an allotetraploid and the product of an interspecific hybridisation event. This was corroborated by fluorescence in situ hybridisation with genomic DNA from V. amoena var sericea, which not only showed that the tetraploid contains more than one chromosome set, but also that its constituent sets have undergone considerable reorganisation.

China↗
PubMed2005

Anatomy and ontogeny of Pterodon emarginatus (Fabaceae: Faboideae) seed.

The aim of this study was to describe the anatomy and ontogeny of Pterodon emarginatus seed using the usual techniques. The ovules are campilotropous, crassinucelate, and bitegmic. The following processes occur during integument development: anticlinal divisions and phenolic compound accumulations in the exotesta, whose cells become palisade; predominantly periclinal divisions and cell expansion in the mesotesta, where the rapheal bundle differentiates; differentiation of the hourglass-cell layer adjacent to the palisade; fusion of outer and inner integuments, which remain individualized structures only at the micropylar end; and intense pectin impregnation in the mesotesta thicker walls with lignification restricted to the xylem. At the hilar pole, the Faboideae seed characteristic structure develops, with double palisade layer, subhilar parenchyma, and tracheid bar. The younger nucellus shows thicker pectic cell walls and is consumed during seed formation. The endosperm is nuclear and, after cellularization, shows peripheral cells with dense lipid content; the seeds are albuminous. The axial embryo shows fleshy cotyledons, which accumulate lipid and protein reserves; starch is rare. Although the seed structure is characteristic of the Fabaceae, the inner integument coalesces into the outer integument without being reabsorbed.

Fabaceae↗
PubMed2005

Rationale for using Peltophorum africanum (Fabaceae) extracts in veterinary medicine.

Peltophorum africanum (Fabaceae) is a deciduous tree widespread in southern Africa. The plant has many ethnomedical and ethnoveterinary uses. Root and bark decoctions are used to treat diarrhoea, dysentery, sore throat, wounds, back and joint pains, HIV-AIDS, venereal diseases and infertility. Pastoralists and rural farmers use the root and bark extracts to treat diarrhoea, dysentery, infertility, and to promote well-being and resistance to diseases in cattle. To evaluate these ethnobotanical leads, dried leaves, stem bark and root bark were extracted with ethanol, acetone, dichloromethane and hexane. Polyphenols in the extract were determined by the Folin-Ciocalteu method with gallic acid as standard. Qualitative antioxidant activity was screened by spraying thin layer chromatograms (TLC) of the extracts with 0.2% 1,1-diphenyl-2-picryl hydrazyl (DPPH), and quantified with Trolox equivalent antioxidant capacity (TEAC) assay. Minimum inhibitory concentration (MIC) and total antibacterial activity (TAA) were determined by serial microplate dilution for Staphylococcus aureus, Escherichia coli, Pseudomonas aeruginosa and Enterococcus faecalis, with gentamicin as standard and tetrazolium violet as growth indicator. Acetone and ethanol extracted the largest quantity of material. Polyphenols concentration was 49.2% in acetone extract of the root and 3.8% in dichloromethane extract of the leaf. Antioxidant activity of at least 5 antioxidant compounds as measured by TEAC ranged from 1.34 (ethanol extract of the root) to 0.01 (hexane extract of the leaf). The total antibacterial activity (volume to which active compounds present in 1 g plant material can be diluted and still inhibit bacterial growth) was 1263 ml/g for ethanol extract of the root against S. aureus, and 800 ml/g for acetone extract of the root against P. aeruginosa. There was substantial activity against both Gram-positive and Gram-negative bacteria, with MIC values of 0.08 mg/ml for S. aureus and 0.16 mg/ml for P. aeruginosa. There is therefore a rationale for the traditional use of root and bark of P. africanum in treating bacterial infection related diseases.

Animals↗
PubMed1983

Geoperception in primary and lateral roots of Phaseolus vulgaris (Fabaceae). I. Structure of columella cells.

Primary roots of Phaseolus vulgaris (Fabaceae) are positively geotropic, while lateral roots are not responsive to gravity In order to elucidate the structural basis for this differential georesponse, we have performed a qualitative and quantitative analysis of the ultrastructure of columella cells of primary and lateral roots of P. vulgaris. Root systems were fixed in situ so as not to disturb the ultrastructure of the columella cells. The columellas of primary roots are more extensive than those of lateral roots. The volumes of columella cells of primary roots are approximately twice those of columella cells of lateral roots. However, columella cells of primary roots contain greater absolute volumes and numbers of all cellular components examined than do columella cells of lateral roots. Also, the relative volumes of cellular components in columella cells of primary and lateral roots are statistically indistinguishable. The endoplasmic reticulum is sparse and distributed randomly in both types of columella cells. Both types of columella cells contain numerous sedimented amyloplasts, none of which contact the cell wall or form complexes with other cellular organelles. Therefore, positive geotropism by roots must be due to a factor(s) other than the presence of sedimented amyloplasts alone. Furthermore, it is unlikely that amyloplasts and plasmodesmata form a multi-valve system that controls the movement of growth regulating substances through the root cap.

Endoplasmic Reticulum↗
PubMed2004

[High level of polymorphism and autotetraploid origin of rare endemic species of Fabaceae, Oxytropis chankaensis Jurtz., inferred from allozyme data].

Using starch electrophoresis, we examined 19 enzyme systems presumably controlled by 35 loci in the rare endemic tetraploid species Oxytropis chankaensis Jurtz. (Fabaceae). Electrophoretic patterns and their genetic interpretation are presented. The isozyme data suggest tetrasomic inheritance in O. chankaensis. Three or four alleles at a particular locus were found in a number of individual plants, which indicate the autotetraploid origin of this species. Seventeen loci were shown to be polymorphic. As reliable gene markers for population systems, we recommend highly active polymorphic systems showing good allozyme separation (Ce-2, Gpi-2, Gpt-2, Idh-2, Lap, Mdh-2, and Mdh-3). Parameters of allozyme variability proved to be very high for a rare species with a restricted range: P = 48.6%, Ap = 3.06, Hob = 0.173.

Alleles↗
PubMedDate not supplied

Analgesic, antiinflammatory and hypoglycemic effects of Sutherlandia frutescens R. BR. (variety Incana E. MEY.) [Fabaceae] shoot aqueous extract.

Previous studies on the pharmacology of South African medicinal plants in our laboratories and elsewhere have shown that some plants possess therapeutic attributes. One such ethnomedically useful plant is Sutherlandia frutescens R. BR. (family: Fabaceae). S. frutescens is widely used in South African traditional medicine for the management and/or control of a plethora of human ailments. In order to scientifically appraise some of the ethnomedical uses of S. frutescens, the present study was undertaken to investigate the analgesic, antiinflammatory and antidiabetic properties of the plant's shoot aqueous extract in experimental animal models. The analgesic effect of the herb's shoot extract was evaluated using the hot-plate and acetic acid test models of pain in mice, while the antiinflammatory and hypoglycemic effects of the plant's shoot aqueous extract were investigated in rats, using fresh egg albumin-induced pedal (paw) edema, and streptozotocin (STZ)-induced diabetes mellitus. Diclofenac (100 mg/kg) and chlorpropamide (250 mg/kg) were used, respectively, as reference drugs for comparison. S. frutescens shoot aqueous extract (50-800 mg/kg i.p.) produced significant (p < 0.05-0.001) analgesic effects against thermally- and chemically-induced nociceptive pain stimuli in mice. The plant extract (50-800 mg/kg p.o. or i.p.) also significantly (p < 0.05-0.001) inhibited fresh egg albumin-induced acute inflammation and caused significant (p < 0.05-0.001) hypoglycemia in rats. The various chemical constituents and secondary metabolites of the herb are speculated to account for the observed analgesic, antiinflammatory and hypoglycemic effects of the plant. The results of this experimental animal study suggest that S. frutescens shoot aqueous extract possesses analgesic, antiinflammatory, and hypoglycemic properties, and thus lend pharmacological credence to the suggested folkloric uses of the herb in the management and/or control of painful, arthritic and other inflammatory conditions, as well as for adult-onset, type-2 diabetes mellitus in some communities of South Africa.

Analgesics↗