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Controlling spatiotemporal chaos via phase space compression.

We present a simple and effective method for controlling spatiotemporal chaos (STC) via phase space compression, by compressing the evolution orbit of the chaotic attractor. In numerical simulations, we obtain global and local control in coupled map lattice (CML) systems by the same phase space compression in different situations, and find that the functional relationship of control results to control parameters in a certain region is the same as the local dynamics expression of the CML. According to the control equation, using different phase space compressions we successfully control a CML exhibiting STC into various desired stable states.

Journal Article↗

Food intake and nutritional status during EXEMSI. Experimental Campaign for the European Manned Space Infrastructure.

Modifications of food intake by astronauts during long-duration spaceflights have been observed. Various psychological stress factors, such as isolation, confinement, constrained community and boredom, are thought to play a role in this phenomenon. For this reason it was decided to include a nutritional investigation in the EXEMSI simulation study, in which four crew members (1 female and 3 males) were isolated and confined for 60 days in a space station-like environment. The Food and Nutritional Management System, developed for this experiment, provided on-line analysis of all available foods in terms of their nutrient content (macronutrients, water, minerals, vitamins). It permitted to keep an accurate record of the daily food intake of each crew member. The system has been shown to be a powerful tool for future missions, either simulations or actual spaceflights. It permits optimal management of food and eating on board, and offers the possibility of online analysis of the nutritional status of the crew. It can provide readily usable data for future analysis of nutritional variables in relation to other physiological and metabolic parameters. It could also supply a periodic feedback to the subject for the purpose of adjusting food intake. Eating and nutrition during the experiment were not a problem, but a pleasure, and therefore played an important role in its success. Confinement and isolation apparently had no effect on either the eating habits or the nutritional status of the crew members. The good food rather helped to decrease the potentially induced stress by providing daily periods of pleasure and of social activities. Detailed analysis of food intake showed erratic eating patterns, both before and during the experiment. However, the weekly averages of macro- and micronutrient intakes were in the normal range, except for vitamins B1 and B6 that were rather low and showed the need for supplements. Food appreciation was assessed by daily questionnaires. Satisfaction with the food provided during isolation was rated very high, and there was no feeling of hunger or monotony. The satisfaction with the food was mainly due to its high palatability, the adequate selection made with direct prior involvement of the crew, the large variety, and the extra supply that allowed the crew to choose and feel free regarding food intake. Comments from the crew afterwards clearly demonstrated that food had not been considered critical during the 60 days of isolation. This is an important fact considering the importance of food in such a restricted living environment.

Adult↗

Environmental quality of urban parks and open spaces in Hong Kong.

It is widely purported that urban parks and open spaces can improve the urban environment by cleansing the air and reducing the noise. However, such environmental functions can be constrained by the size and the location of urban parks in very dense cities. This study examines the air and acoustic environment and heavy metal contamination in Hong Kong urban parks and open spaces. Using a hybrid field measurement and computer simulation approach, the study has found that while the air quality in urban parks is better than that of the roadside, it is not significantly different from that of the ambient conditions. Noise levels in the urban parks are not significantly lower than those at the typical home environment in Hong Kong. Heavy metals in urban park dust are slightly lower than that found at the roadside and are broadly comparable to those found at typical homes and nursery schools. These findings lend support to the postulation that the capability of urban parks and open spaces in dense cities to improve the urban environment is rather limited and call for a re-examination of the role of urban parks in enhancing urban livability. The findings also have implications on how urban parks in dense cities should be designed and managed.

Air Pollutants↗

Molecular simulation of the interlayer structure and the mobility of alkyl chains in HDTMA+/montmorillonite hybrids.

Molecular simulation techniques are used to find the basal spacing of organoclay on the basis of the energy minimum, using the canonical NVT ensemble. Then, the interlayer structure and mobility of alkyl chains are explored based on the interlayer atomic density profiles. Besides the basic lateral-monolayer arrangement, lateral-bilayer accompanied by partial a pseudo-trilayer and a transition structure between the two basic lateral models are observed. The later provides an excellent explanation about the reflection at 16 angstroms on XRD patterns in the literature. The atomic density profiles reveal that nitrogen atoms show stronger layering behavior than carbon atoms do. Our simulation demonstrates that the molecular mobility of the confined alkyl chains decreases from lateral-monolayer to lateral-bilayer with the increase of the intercalated surfactant. This is in accordance with the suggestion deduced from experiments. Furthermore, our simulation indicates that the mobility of the alkyl chains strongly depends on the surfactant arrangement rather than the surfactant packing density.

Journal Article↗

Evaluation of theories of complex movement planning in different levels of gravity.

Due to high redundancy of degrees of freedom in the human body, we can perform any movement, from the simplest to the most complex, in many different ways. Several studies are still trying to identify the motor strategies that master this redundancy and generate the movements whose characteristics are highly stereotyped. The aim of this work is to build a simulator that is able to evaluate different motor planning hypotheses. The most interesting applications of this tool occur in studies of the motor strategy in microgravity conditions. The comparison between simulated movements and kinematics data recorded both on Earth, and during a 5-month mission on board the Mir station shows that for a complex whole-body movement (such as trunk bending) a single planning criterion cannot explain all movement aspects. However, the simulator allows an understanding of the motor planning adaptation of astronauts. In space, the lack of equilibrium constraint (which on Earth brings about the center of mass control) leads to a new motor strategy that minimizes dynamic interactions with the floor.

Adaptation, Physiological↗

Thrombosed varix in the submandibular space.

Thrombosed varix in the oral region often appears as a pigmented mass in the mucosa simulating a hemangiomatous lesion. It rarely occurs in the deeper orofacial region. We report a case of thrombosed varix in the submandibular space with symptoms of a tumor. The clinical symptoms and MRI and CT findings are discussed. The clinical symptoms were not characteristics. High signal intensity on CT (80 HU) and a concentric signal distribution on CT and MRI may suggest a thrombosed varix.

Chin↗

[Vertebral, femoral and radial bone density in simulation of prolonged weightlessness. Experience with healthy volunteers].

Disturbances in bone tissue induced by weightlessness in man are incompletely known. All we possess are indirect data which show negativation of the calcium-phosphate balance and bone density measurements mainly in peripheral bones (calcaneum and radius bones). Staying in supine position with the head down (the so-called anti-orthostatic position) is a means of simulating on earth the effects of weightlessness in space flights. We studied the changes in vertebral, femoral and radial bone densities that might occur in 7 healthy volunteers subjected to two 1-month period of bed rest with strict (-6 degrees) anti-orthostatic position. No significant variation was recorded at the end of each period. When the two periods were added the mean vertebral bone loss was -0.9 percent per month. This figure was comparable to that found in similar studies performed in the USA with longer periods of bed rest. The bone loss in such experiments was 4 to 8 times less than that reported for pathological immobilization. Further simulation studies are needed to evaluate the bone loss kinetics and to test the effectiveness of the preventive measures used in spatial flights.

Adult↗

[Changes of cerebral circulation during weightlessness or simulated weightlessness].

The results about studies on changes of the cerebral circulation during weightlessness/simulated weightlessness were reviewed in this paper. The possible influencing mechanism of weightlessness on cerebral circulation and its physiological significance were summarized. It could be concluded that the changes of cerebral circulation were the results of self-regulation of the brain to maintain its normal function, and it might play an important role in the genesis of postflight orthostatic intolerance.

Aerospace Medicine↗

[Quantitative changes in the ultrastructure of myocardial cells in Japanese quail during hypergravity, hypodynamia and space flight].

The experimental work aimed at the quantitative ultrastructure of the myocardial cells of the Japanese quail Coturnix coturnix japonica during hypergravitation, hypodynamism and space flight in a Soviet satellite. For the determination of quantitative changes of the myocardial ultrastructure a morphometrical method was used with parameters like the number of mitochondria, average mitochondrial size, relative mitochondrial volume, deficiency of cristae and relative volume of myofibrils. The quails were observed in 3 groups. The absolute control consisted of quails living in normal Earth conditions, in the laboratory group the quails were exposed to conditions of hypergravitation and hypodynamism in a specially constructed centrifuge, and in the flying group the quails were exposed to space flight in a Soviet orbital station MIR. In the group of absolute controls no pathological changes of the myocardial ultrastructure were found. In the flying group there were no significant changes, with the exception of decreased relative volume of myofibrils, which however agrees with the findings on symptoms corresponding to human and animal heart weakness during space flights. In the laboratory group, pathological changes were observed in each of the fractions. The most significant pathological findings were found in the group controls in the center and in hypergravitation combined with hypodynamism. It can be concluded that the laboratories can simulate conditions induced by the start and flight of space ships. (Fig. 2, Ref, 8.)

Animals↗

Dose perturbation effects in prostate seed implant brachytherapy with I-125.

EGSnrc Monte Carlo simulation was used to investigate dose perturbation effects in prostate seed implant brachytherapy using 125I radioactive seeds used in implant brachytherapy. Dose perturbation effects resulting from the seed mutual attenuation in a prostate seed implant consisting of 27 seeds were investigated. The results showed that for 125I seeds implanted into the prostate at 1.00 cm, 0.75 cm and 0.50 cm apart (uniform spacing), the dose perturbation effects are up to 10%. The volume of the target occupied by the 10% dose difference between the full Monte Carlo simulation and the single seed superposition model decreases with increasing seed spacing. Despite the differences between the Monte Carlo simulation and the simple superposition, there was no significant change in the dose volume histogram for 1 cm and 0.75 cm seed spacing. However, there was a significant change in the dose volume histogram when the seed spacing was 0.5 cm. An analysis of the external volume index (EI), coverage index (CI) and homogeneity index (HI) also showed that there is no difference in these indexes for the 1.00 cm and 0.75 cm seed spacing between the simple superposition model and the full Monte Carlo simulation. Compared to the full Monte Carlo simulations, the simple superposition model overestimated EI, CI and HI by 7%, 5% and 4% respectively for the 0.50 cm seed spacing.

Brachytherapy↗

A refined model of the thyrotropin-releasing hormone (TRH) receptor binding pocket. Novel mixed mode Monte Carlo/stochastic dynamics simulations of the complex between TRH and TRH receptor.

Previous mutational and computational studies of the thyrotropin-releasing hormone (TRH) receptor identified several residues in its binding pocket [see accompanying paper, Perlman et al. (1996) Biochemistry 35, 7643-7650]. On the basis of the initial model constructed with standard energy minimization techniques, we have conducted 15 mixed mode Monte Carlo/stochastic dynamics (MC-SD) simulations to allow for extended sampling of the conformational states of the ligand and the receptor in the complex. A simulated annealing protocol was adopted in which the complex was cooled from 600 to 310 K in segments of 30 ps of the MC-SD simulations for each change of 100 K. Analysis of the simulation results demonstrated that the mixed mode MC-SD protocol maintained the desired temperature in the constant temperature simulation segments. The elevated temperature and the repeating simulations allowed for adequate sampling of the torsional space of the complex with successful conservation of the general structure and good helicity of the receptor. For the analysis of the interaction between TRH and the binding pocket, TRH was divided into four groups consisting of pyroGlu, His, ProNH2, and the backbone. The pairwise interaction energies of the four separate portions of TRH with the corresponding residues in the receptor provide a physicochemical basis for the understanding of ligand-receptor complexes. The interaction of pyroGlu with Tyr106 shows a bimodal distribution that represents two populations: one with a H-bond and another without it. Asp195 was shown to compete with pyroGlu for the H-bond to Tyr106. Simulations in which Asp195 was interacting with Arg283, thus removing it from the vicinity of Tyr106, resulted in a stable H-bond to pyroGlu. In all simulations His showed a van der Waals attraction to Tyr282 and a weak electrostatic repulsion from Arg 306. The ProNH2 had a strong and frequent H-bonding interaction with Arg306. The backbone carbonyls show a frequent H-bonding interaction with the OH group of Tyr282 and strong, often multiple, interactions with Arg306. Three structures, which maintained these interactions simultaneously, were selected as candidates for ligand-receptor complexes. These show persistent interactions of TRH with Ile 109 and Ile 116 in HX 3 and with Tyr310 and Ser313 in HX 7, which will be tested to refine the structure of the ligand-receptor complex. The superposition of the three structures shows the extent of structural flexibility of the receptor and the ligand in the complex. The backbone of TRH inside the receptor is in an alpha-helical conformation, suggesting that the receptor, through its interaction with the ligand, provides the energy required for the conformational change in the ligand from an extended to the folded form.

Amino Acid Sequence↗

Airway level at which edema liquid enters the air space of isolated dog lungs.

To identify lung units associated with liquid leakage into the air space in high-pressure pulmonary edema, we perfused air-inflated dog lung lobes with albumin solution to fill the loose peribronchovascular interstitium. Next, we perfused the lobes for 90 s with fluorescent albumin solution then froze the lobes in liquid nitrogen. This procedure confined the fluorescent perfusate to the liquid flux pathway between the circulation and the air space and eliminated the previously filled peribronchovascular cuffs as a source of the fluorescence that entered the air space. We divided each frozen lobe into three horizontal layers and prepared fluorescence-microscopic sections of each layer. In the most apical layers where alveolar flooding was minimal, 10.6 +/- 21.0% (SD) of alveolar ducts were either fluorescence filled or air filled and continuous with fluorescence-filled alveoli. In the same layers, 11.0 +/- 19.0% of respiratory bronchioles were similarly labeled. No terminal bronchioles in these layers were fluorescence labeled. This suggested that the fluorescent albumin entered the air space across the epithelium of respiratory bronchioles, alveolar ducts, or their associated alveoli. To simulate an alternative explanation, i.e., that fluorescence first entered central airways then flowed into peripheral air spaces, we prepared two additional lobes that we first partially inflated with fluorescent albumin then filled to capacity with air. This pushed the fluorescent solution along the airways into the lung periphery. In these lobes the ciliary lining of bronchi and terminal bronchioles was fluorescence coated. By comparison, cilia in fluorescence-perfused lobes were not coated. We conclude that alveolar flooding in hydrostatic pulmonary edema occurs across the epithelium of alveolar ducts, respiratory bronchioles, or their associated alveoli.(ABSTRACT TRUNCATED AT 250 WORDS)

Animals↗

Optimized beam planning for linear accelerator-based stereotactic radiosurgery.

PURPOSE: Current treatment planning for linear accelerator-based stereotactic radiosurgery and radiotherapy is a lengthy and iterative procedure. The planner has to manually select the beam arcs and carefully consider many different selections to ensure target volume coverage while sparing dose to critical organs. In this article we report an optimization procedure that can automatically select the beam arcs based on geometric and dosimetric analysis of the treatment parameters. METHODS AND MATERIALS: The optimization problem is introduced by using a Beam's Eye View (BEV) map where a pattern of lines represents a beam arc combination for a treatment plan. The collection of all possible treatment plans is described by using the concept of phase space where each point corresponds to a particular configuration of the system under consideration, and in this case, a particular beam arc combination. A geometric reduction of the phase space is performed by excluding static beam ports that irradiate too much critical organs and too little target volume. The phase space is further reduced by excluding beam arc combinations that do not comply with treatment convenience considerations and established planning experiences. These reductions significantly reduces the number of beam arc combinations to be considered and thus dramatically simplifies the computational complexity. The method of simulated annealing is then used to the reduced phase space to select the set of beam arcs that provides the best surface dose distribution for the target volume. The optimization procedure is applied to a radiosurgery case to compare the optimized beam arcs with the previously manually planned beam arcs. The procedure is also applied to 10 randomly selected cases for a comparison in terms of tissue-volume ratio calculations. RESULTS: The system is a highly automated beam arc planning tool for stereotactic radiosurgery and stereotactic radiotherapy. Its interactive nature allows the planner to rapidly consider many treatment plans to search for the best option. For the case presented, it is shown that the optimized beams substantially reduce the dose to the postrema. The tissue-volume ratio calculations demonstrate that the optimization often produces clinically superior treatment plans than the manual beam planning method. CONCLUSIONS: Our method of phase space reduction proves to be very useful in approaching the complex problem of treatment planning optimization. Not only does it substantially reduce the number of beam arcs that need to be considered, but it also simplifies the evaluation of the beam arc options. Both of these greatly reduce the computational complexity of the optimization and make the procedure fast and efficient. Moreover, the reduction of phase space adds another layer of interaction between the user and the beam selection procedure, so that the optimization process is well controlled and thus very effective.

Brain Neoplasms↗

A mathematical and experimental simulation of the hematological response to weightlessness.

Two ground-based methods of weightlessness simulation--a computer model of erythropoiesis feedback regulation and bedrest--were used to investigate the mechanisms which lead to loss of red cell mass during spaceflight. Both methods were used to simulate the first Skylab mission of 28 days. Human bedrest subjects lose red cell mass linearly with time and in this study the loss was 6.7% at the end of four weeks (compared to 14% in Skylab). Postbedrest recovery of red cell mass was delayed for two weeks during which time a further decline in this quantity was noted. This is consistent with the first Skylab mission but not with the two longer flights of two and three months. Hemoconcentration, observed early in the study, was essentially maintained despite red cell loss because of continued loss of plasma volume. The computer model, using the time-varying hematocrit data to estimate red cell production rates, predicted dynamic behavior of plasma volume and red cell mass that was in close agreement with the measured values. The results support the hypothesis that red cell loss during supine bedrest is a normal physiological feedback process in response to hemoconcentration enhanced tissue oxygenation and suppression of red cell production. In contrast, the delayed postbedrest recovery of red cell mass was more difficult to explain, especially in the light of enhanced reticulocyte indices observed at the onset on ambulation. Model simulation suggested the possibilities, still to be experimentally demonstrated, that this period was marked by some combination of increased oxygen-hemoglobin affinity, small reductions in mean red cell life span, ineffective erythropoiesis, or abnormal reticulocytosis. The question of whether hemoconcentration is the sole contributor to spaceflight red cell losses also remains to be resolved.

Bed Rest↗

[The effect of weightlessness and simulated weightlessness on the expression of genes].

The research results of the relationship between gene expression and weightlessness or simulated weightlessness were studied. The influence of weight on the expression of genes in central nervous system were summarized in three aspects. It can be concluded that the expression of genes in central nervous system were precisely regulated by weight. It was important to study the effects of microweight on central nervous system in the molecular level.

Aerospace Medicine↗

Solution structure of a pentasaccharide representing the repeating unit of the O-antigen polysaccharide from Escherichia coli O142: NMR spectroscopy and molecular simulation studies.

Conformational studies have been performed of a pentasaccharide derived from the O-polysaccharide from Escherichia coli O142. The polymer was selectively degraded by anhydrous hydrogen fluoride and reduced to yield an oligosaccharide model of its repeating unit, which in the branching region consists of four aminosugars. A comparison of (1)H and (13)C chemical shifts between the pentasaccharide and the polymer showed only minor differences, except where the cleavage had taken place, indicating that the oligomer is a good model of the repeating unit. Langevin dynamics and molecular dynamics simulations with explicit water molecules were carried out to sample the conformational space of the pentasaccharide. For the glycosidic linkages between the hexopyranoside residues, small but significant changes were observed between the simulation techniques. One-dimensional (1D) (1)H,(1)H double pulsed field gradient spin echo (DPFGSE) transverse rotating-frame Overhauser effect spectroscopy (T-ROESY) experiments were performed, and homonuclear cross-relaxation rates were obtained. Subsequently, a comparison of interproton distances from NMR experiment and the two simulation approaches showed that in all cases the use of explicit water in the simulations resulted in better agreement. Hydrogen-bond analysis of the trajectories from the molecular dynamics simulation revealed interresidue interactions to be important as a cluster of different hydrogen bonds and as a distinct highly populated hydrogen bond. NMR data are consistent with the presence of hydrogen bonding within the model of the repeating unit.

Carbon Isotopes↗

Modelling the 1985 influenza epidemic in France.

The Rvachev-Baroyan-Longini model is a space-time predictive model of the spread of influenza epidemics. It has been applied to 128 cities of the USSR, and more recently, to forecasting the spread of the pandemic of 1968-1969 throughout 52 large cities. It is a deterministic, mass-action, space and time continuous model. The model has been applied to the simulation of the influenza epidemic of 1984-1985 in the 22 French Metropolitan districts and results are presented. Estimates of the parameters of the model were made using the French Communicable Diseases Network data. These parameters are the contact rate, a, (estimate = 0.55) which is the number of people with whom an infectious individual will make contact daily sufficient to pass infection and the infectious period, 1/b, estimated as 2.49 days. The mean annual railroad passenger traffic from district i to district j varies from 0 to 1,991,000 persons depending on the districts. The computer spread of the epidemic is presented on weekly maps. Results are also presented on district charts, giving the size of district epidemics and the time of peak of the epidemic. The precision of the computer fittings was judged satisfactory by the calculated size of peak differing from the real one by less than 100 per cent, in 17 out of 18 districts, and by the calculated time of peak differing from the observed by less than two weeks in 14 out of 18 districts. Although precision could be improved with more detailed information about passenger traffic, the French use of the model has been satisfactory.

Computer Simulation↗

Planning, implementation and optimization of future space missions using an immersive visualization environment (IVE) machine.

Beginning in 1995, a team of 3-D engineering visualization experts assembled at the Lockheed Martin Space Systems Company and began to develop innovative virtual prototyping simulation tools for performing ground processing and real-time visualization of design and planning of aerospace missions. At the University of Colorado, a team of 3-D visualization experts also began developing the science of 3-D visualization and immersive visualization at the newly founded British Petroleum (BP) Center for visualization, which began operations in October, 2001. BP acquired ARCO in the year 2000 and awarded the 3-D flexible IVE developed by ARCO (beginning in 1990) to the University of Colorado, CU, the winner in a competition among 6 Universities. CU then hired Dr. G. Dorn, the leader of the ARCO team as Center Director, and the other experts to apply 3-D immersive visualization to aerospace and to other University Research fields, while continuing research on surface interpretation of seismic data and 3-D volumes. This paper recounts further progress and outlines plans in Aerospace applications at Lockheed Martin and CU.

Astronauts↗