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PubMedDate not supplied

Endogenous lipid pneumonia- and alveolar proteinosis-type changes in the vicinity of non-small cell lung cancer: histiopathologic, immunohistochemical, and ultrastructural evaluation.

Endogenous lipid pneumonia (ELP) and pulmonary alveolar proteinosis (AP) are the most common pathological conditions of lung tissue in which there is an increased accumulation of surfactant elements in pulmonary alveoli. This paper evaluates the morphology, morphogenesis, and pathogenesis of ELP- and AP-type changes in the immediate vicinity of non-small cell lung cancer (NSCLC). The analyses used lung tissue obtained from the vicinity of 56 NSCLC. ELP- or/and AP-type changes in histopathological studies were found in lung tissue surrounding 35 NSCLC. Ultrastructural analyses by transmission electronmicroscopy identified 15 cases with advanced ELP and confirmed the possibility of coexistence of ELP- and AP-type changes in the vicinity of NSCLC and the evolution of ELP into AP. Most cases analyzed showed morphological features characteristic of both AP and ELP, the intensity and degree of these changes being considerably differentiated. Type II pneumocytes, macrophages, and neutrophilic granulocytes play a significant part in the morphogenesis of ELP and AP.

Carcinoma, Non-Small-Cell Lung↗
PubMed2004

Phylogeny of the orchid bees (Hymenoptera: Apinae: Euglossini): DNA and morphology yield equivalent patterns.

Orchid bees (Euglossini) are spectacular long-tongued Neotropical bees important in the pollination of Neotropical long-corolla flowers, particularly some orchids. Besides remarkably long tongues, males in particular exhibit other flower-related adaptations, including setal brushes on the foretarsi used for rasping the petals of orchids while collecting aromatic compounds. These compounds are stored in large swollen tibiae and are thought to play an important role in courtship behavior. Euglossini are also unusual in lacking sociality; they are the only tribe among the corbiculate bees that are not eusocial, and two of the genera are cleptoparasitic. Each genus exhibits distinct behavioral traits including nest architecture and host-parasite interactions, yet their evolution is unknown. Despite previous phylogenetic studies of on morphological characters, the relationships among the five euglossine genera remain under debate. We investigate euglossine generic relationships using DNA sequence data from four genes and new morphological characters. The morphological and molecular data yield congruent evolutionary patterns, and combining the data gives a fully resolved and well supported phylogeny of Euglossini.

Animals↗
PubMed2005

An evolutionary history of the FGF superfamily.

Fibroblast growth factors (FGF) are associated with multiple developmental and metabolic processes in triploblasts, and perhaps also in diploblasts. The evolution of the FGF superfamily has accompanied the major morphological and functional innovations of metazoan species. The study of FGFs throughout species shows that the FGF superfamily can be subdivided in eight families in present-day organisms and has evolved through phases of gene duplications and gene losses. At least two major expansions of the superfamily can be recognized: a first expansion increased the number of FGFs from one or few archeo-FGFs to eight proto-FGFs, prototypic of the eight families. A second expansion, which took place during euchordate evolution, is associated with genome duplications. It increased the number of members in the families. Subsequent losses reduced that number to the present-day figures.

Animals↗
PubMed1989

Modern mammal origins: evolutionary grades in the Early Cretaceous of North America.

Major groups of modern mammals have their origins in the Mesozoic Era, yet the mammalian fossil record is generally poor for that time interval. Fundamental morphological changes that led to modern mammals are often represented by small samples of isolated teeth. Fortunately, functional wear facets on teeth allow prediction of the morphology of occluding teeth that may be unrepresented by fossils. A major step in mammalian evolution occurred in the Early Cretaceous with the evolution of tribosphenic molars, which characterize marsupials and placentals, the two most abundant and diverse extant groups of mammals. A tooth from the Early Cretaceous (110 million years before present) of Texas tests previous predictions (based on lower molars) of the morphology of upper molars in early tribosphenic dentitions. The lingual cusp (protocone) is primitively without shear facets, as expected, but the cheek side of the tooth is derived (advanced) in having distinctive cusps along the margin. The tooth, although distressingly inadequate to define many features of the organism, demonstrates unexpected morphological diversity at a strategic stage of mammalian evolution and falsifies previous claims of the earliest occurrence of true marsupials.

Animals↗
PubMed2004

The evolution of the peculiarities of mammalian sex chromosomes: an epigenetic view.

In most discussions of the evolution of sex chromosomes, it is presumed that the morphological differences between the X and Y were initiated by genetic changes. An alternative possibility is that, in the early stages, a key role was played by epigenetic modifications of chromatin structure that did not depend directly on genetic changes. Such modifications could have resulted from spontaneous epimutations at a sex-determining locus or, in mammals, from selection in females for the epigenetic silencing of imprinted regions of the paternally derived sex chromosome. Other features of mammalian sex chromosomes that are easier to explain if the epigenetic dimension of chromosome evolution is considered include the relatively large number of X-linked genes associated with human brain development, and the overrepresentation of spermatogenesis genes on the X. Both may be evolutionary consequences of dosage compensation through X-inactivation.

Animals↗
PubMed1982

The biocultural evolution of Khoisan populations of Southern Africa.

The research presented here offers new information on the recent evolution of Khoisan populations of southern Africa through the new study of Holocene skeletons. When combined with subfossil and historical remains, these archeological specimens provide a skeletal record for the last 5000-9000 years of southern African prehistory. Multivariate statistical analyses of cranial measurements were used to determine patterns of morphological variation in the skeletal record with which hypotheses of biocultural evolution were tested. These analyses yielded the following results. First, the traditional distinction between Bushmen ad Hottentots holds for recent inland individuals. Second, there is a suggestion of a morphologically distinct San population living on the coast of South Africa. The idea of a "Strandloper" population suggested by early scholars is here revived. The third results is that there is little evidence of complete population succession on the coast of South Africa,, suggesting that there were to massive population movements associated with the spread of Hottentot pastoralism throughout southern Africa.

Africa, Southern↗
PubMed2000

Genetic control and evolution of sexually dimorphic characters in Drosophila.

Sexually dimorphic abdominal pigmentation and segment morphology evolved recently in the melanogaster species group of the fruitfly Drosophila. Here we show that these traits are controlled by the bric à brac [corrected] (bab) gene, which integrates regulatory inputs from the homeotic and sex-determination pathways. bab expression is modulated segment- and sex-specifically in sexually dimorphic species, but is uniform in sexually monomorphic species. We suggest that bab has an ancestral homeotic function, and that regulatory changes at the bab locus played a key role in the evolution of sexual dimorphism. Pigmentation patterns specified by bab affect mating preferences, suggesting that sexual selection has contributed to the evolution of bab regulation.

Animals↗
PubMed2005

Hierarchical nature of morphological integration and modularity in the human posterior face.

Morphological integration and modularity are important points of intersection between evolution and the development of organismal form. Identification and quantification of integration are also of increasing paleoanthropological interest. In this study, the "posterior face," i.e., the mandibular ramus and its integration with the associated midline and lateral basicranium, is analyzed in lateral radiographs of 144 adult humans from three different geographic regions. The null hypothesis of homogenously pervasive morphological integration among "posterior-face" components is tested with Procrustes geometric morphometrics, partial least squares, and singular warps analysis. The results reveal statistically significant differences in integration. Only loose integrative relationships are found between midline and lateral components of the basicranium, which may indicate the presence of at least two different basicranial modules. This modularity can be interpreted in terms of spatiotemporal dissociation in the development of those basicranial structures, and gives support to hypotheses of independent phylogenetic modifications at the lateral and midline basicranium in humans. In addition, morphological integration was statistically significantly stronger between the middle cranial fossa and the mandibular ramus than between the ramus and the midline cranial base. This finding confirms previous hypotheses of a "petroso-mandibular unit," which could be a developmental consequence of well-known phylogenetic modifications in coronal topology of the posterior face and base in hominoid evolution, related to middle cranial fossa expansion. This unit could be involved in later evolutionary tendencies in the hominid craniofacial system.

Adult↗
PubMed1976

[Adaptational evolution of embryogenesis and adult placental individuals].

On the basis of a comparative morphological and embryological analysis the author concludes that lower mammals (ovipositors and marsupials) and higher mammals should not be united into a single class. Two classes should be distinguished: 1) lower mammals including modern ovipositor animals and marsupial animals and fossilized Multituberculata, Triconodonta, Symmetrodonta and Pantotheria; and 2) higher mammals or placental animals.

Adaptation, Biological↗
PubMed1995

Molecular cloning and sequence analysis of factor C cDNA from the Singapore horseshoe crab, Carcinoscorpius rotundicauda.

Two forms of Factor C cDNAs: CrFC21 (3448 bp) and CrFC26 (4182 bp) have been cloned into lambda gt22. CrFC26 includes 568 nucleotides of 5' untranslated region (5' UTR) containing seven ATGs before the real initiation site, an open reading frame (ORF) of 3249 nucleotides, a stop codon, and 365 nucleotides of 3' untranslated sequence. There are four polyadenylation signals and six potential glycosylation sites. The ORF codes for a signal peptide of 24 amino acids and a Factor C zymogen of 1059 residues. The CrFC21 lacks most of the 5' UTR, and has some base changes in its ORF. The predicted secondary mRNA structures of the 5' end of CrFC26 showed numerous stem-and-loop structures, thus obscuring its real start codon. In contrast, CrFC21 has a well-exposed AUG start site, and expresses Factor C in transcription-translation reactions in vitro. There is a typical serine protease catalytic triad of Asp-His-Ser, which is structurally like prothrombin, but catalytically more similar to trypsin. Although an overall homology of 97.7% was observed in comparison with the Tachypleus tridentatus Factor C (TtFC) cDNA, there were notable differences in the restriction sites and subtle base substitutions in the CrFC cDNA. The high degree of homology between Factor C from T. tridentatus and C. rotundicauda substantiates, at the molecular level, the proximity of these two species in the course of evolution. This finding contravenes the apparent disparities with respect to their morphology, ecological habitat, and taxonomical classification.

Amino Acid Sequence↗
PubMed1999

Circumscription and phylogeny of the Laurales: evidence from molecular and morphological data.

The order Laurales comprises a few indisputed core constituents, namely Gomortegaceae, Hernandiaceae, Lauraceae, and Monimiaceae sensu lato, and an equal number of families that have recently been included in, or excluded from, the order, namely Amborellaceae, Calycanthaceae, Chloranthaceae, Idiospermaceae, and Trimeniaceae. In addition, the circumscription of the second largest family in the order, the Monimiaceae, has been problematic. I conducted two analyses, one on 82 rbcL sequences representing all putative Laurales and major lineages of basal angiosperms to clarify the composition of the order and to determine the relationships of the controversal families, and the other on a concatenated matrix of sequences from 28 taxa and six plastid genome regions (rbcL, rpl16, trnT-trnL, trnL-trnF, atpB-rbcL, and psbA-trnH) that together yielded 898 parsimony-informative characters. Fifteen morphological characters that play a key role in the evolution and classification of Laurales were analyzed on the most parsimonious molecular trees as well as being included directly in the analysis in a total evidence approach. The resulting trees strongly support the monophyly of the core Laurales (as listed above) plus Calycanthaceae and Idiospermaceae. Trimeniaceae form a clade with Illiciaceae, Schisandraceae, and Austrobaileyaceae, whereas Amborellaceae and Chloranthaceae represent isolated clades that cannot be placed securely based on rbcL alone. Within Laurales, the deepest split is between Calycanthaceae (including Idiospermaceae) and the remaining six families, which in turn form two clades, the Siparunaceae (Atherospermataceae-Gomortegaceae) and the Hernandiaceae (Monimiaceae s.str. [sensu stricto]-Lauraceae). Monimiaceae clearly are polyphyletic as long as they include Atherospermataceae and Siparunaceae. Several morphological character state changes are congruent with the molecular tree: (1) Calycanthaceae have disulculate tectate-columellate pollen, while their sister clade has inaperturate thin-exined pollen, with the exception of Atherospermataceae, which have columellate but meridionosulcate or disulcate pollen. (2) Calycanthaceae have two ventral ovules while their sister clade has solitary ovules. Within this sister clade, the Hernandiaceae (Lauraceae-Monimiaceae) have apical ovules, while the Siparunaceae (Atherospermataceae-Gomortegaceae) are inferred to ancestrally have basal ovules, a condition lost in Gomortega, the only lauralean genus with a syncarpous ovary. (3) Calycanthaceae lack floral nectaries (except for isolated nectarogeneous fields on the inner tepals), while their sister clade ancestrally has paired nectar glands on the filaments. Filament glands were independently lost in higher Monimiaceae and in Siparunaceae concomitant with pollinator changes away from nectar-foraging flies and bees to non-nectar feeding beetles and gall midges. (4) Disporangiate stamens with anthers dehiscing by two apically hinged valves are ancestral in Siparunaceae-(Atherospermataceae-Gomortegaceae) and evolved independently within Hernandiaceae and Lauraceae. Depending on the correct placement of Calycanthaceae-like fossil flowers, tetrasporangiate anthers with valvate dehiscence (with the valves laterally hinged) may be ancestral in Laurales and lost in modern Calycanthaceae and Monimiaceae.

Journal Article↗
PubMed1997

The evolution of ectoparasitism in the genus Lucilia (Diptera:Calliphoridae).

To consider the evolutionary origin of the ectoparasitic habit in the blowfly genus Lucilia (Diptera:Calliphoridae), phylogenetic analyses of mitochondrial DNA sequence data were performed for 10 species, including all the common Lucilia agents of myiasis, collected from Africa, Australasia, North America and Europe. Complementary genetic distance and parsimony analyses are used to consider inter and intraspecific relationships within the genus with reference to previous morphological work. The results support the hypothesis of independent multiple evolution of the ectoparasitic habit in Lucilia sericata, Lucilia cuprina and the Lucilia caesar/Lucilia illustris group and suggest that it has coevolved in relatively recent history along with the domestication and husbandry of sheep. The geographic differences in pathogenic importance of various species of Lucilia also suggest that there is a strong climatic influence determining which species has dominated. Lucilia cuprina has become the predominant pathogenic species in sub-tropical and warm temperate habitats (e.g., Australia and South Africa), L. sericata in cool temperate habitats (e.g., Europe and New Zealand) and L. caesar and L. illustris become more common in sheep myiasis in more northerly Palaearctic regions.

Africa↗
PubMed2000

Rapid evolution of male reproductive genes in the descent of man.

A diverse body of morphological and genetic evidence has suggested that traits pertaining to male reproduction may have evolved much more rapidly than other types of character. Recently, DNA sequence comparisons have also shown a very high level of divergence in male reproductive proteins between closely related Drosophila species, among marine invertebrates and between mouse and rat. Here we show that rapid evolution of male reproductive genes is observable in primates and is quite notable in the lineages to human and chimpanzee. Nevertheless, rapid evolution by itself is not necessarily an indication of positive darwinian selection; relaxation of negative selection is often equally compatible with the DNA sequence data. By taking three statistical approaches, we show that positive darwinian selection is often the driving force behind this rapid evolution. These results open up opportunities to test the hypothesis that sexual selection plays some role in the molecular evolution of higher primates.

Amino Acid Substitution↗
PubMed2004

The myoseptal system in Chimaera monstrosa: collagenous fiber architecture and its evolution in the gnathostome stem lineage.

Recent studies have revealed the 3D morphology and collagen fiber architecture of myosepta in teleostome fishes. Here we present the first data set on the myoseptal structure of a representative of the chondrichthyan clade. We investigate the series of myosepta in the ratfish Chimaera monstrosa (Holocephali) from the anterior to the posterior body using microdissections of cleared and stained specimens, polarized light microscopy of excised myosepta, and histology. The features of the myoseptal system of Chimaera are compared to data from closely related vertebrate groups and are mapped onto a phylogenetic tree to further clarify the characteristics of the myoseptal series in the gnathostome ancestor. The 3D morphology and collagen fiber architecture of the myoseptal series in C. monstrosa resembles that of Teleostomi (Actinopterygii+Sarcopterygii) with regard to several features. Our comparative analysis reveals that some of them have evolved in the gnathostome stem lineage. (1) A series of epineural and epaxial lateral tendons (LTs) along the whole body, and a series of epipleural and hypaxial LTs in the postanal region evolved in the gnathostome stem lineage. (2) The LTs increase in length towards the posterior body (three-fold in Chimaera). Data on Chimaera and some comparative data on actinopterygian fishes indicate that LTs also increase in thickness towards the posterior body, but further data are necessary to test whether this holds true generally. (3) Another conspicuous apomorphic gnathostome feature is represented by multi-layer structures of myosepta. These are formed along the vertebral column by converging medial regions of successive sloping parts of myosepta. (4) The dorsalmost and ventralmost flanking parts of myosepta bear a set of mediolaterally oriented collagen fibers that are present in all gnathostomes but are lacking in outgroups. Preanal hypaxial myosepta are clearly different from epaxial myosepta and postanal hypaxial myosepta in terms of their collagen fiber architecture. In Chimaera, preanal hypaxial myosepta consist of an array of mediolaterally oriented collagen fibers closely resembling the condition in other gnathostome groups and in petromyzontids. Only one series of tendons, the myorhabdoid tendons of the flanking parts of myosepta, have evolved in the stem lineage of Myopterygii (Gnathostomata+Petromyzontida). Similar to LTs, the tendons of this series also increase in length towards the posterior body. In combination with other studies, the present study provides a framework for the design of morphologically based experiments and modeling to further address the function of myosepta and myoseptal tendons in gnathostomes.

Journal Article↗
PubMed1992

Evolutionary somatic cell changes in cervical tumour progression quantitatively evaluated with morphological, histochemical and kinetic parameters.

The somatic cell changes which characterise malignancy evolution in human cervical preneoplastic and neoplastic lesions have been assessed on histological sections by means of a computerised image analyser. Many features have been simultaneously measured on each cell of the lesions studied, and the following results have been obtained: Some features, mainly kinetic, show continuously increasing values which express changes correlated to the increasing malignancy; other features, especially related to nuclear atypia, cellular heterogeneity and the degree of aneuploidy, have values dropping at the level of early stromal infiltration, which can be morphometrically characterised as composed of relatively homogeneous phenotypes; these features seem to express the degree of genetic instability and relate to the evolutionary somatic cell changes; tumour progression evolves through sequential discontinuous steps, each of them characterised by specific phenotypical features of the neoplastic cell population; the neoplastic cells in the foci of early stromal infiltration and vascular invasion, phenotypically more homogeneous than the parent cell populations of carcinoma in situ and infiltrating carcinoma, seem to possess a greater genetic stability.

Aneuploidy↗
PubMed2003

Heterogeneous selection on LEGCYC paralogs in relation to flower morphology and the phylogeny of Lupinus (Leguminosae).

An analysis of the molecular evolution of two LEGCYC paralogs in Lupinus (Genisteae: Leguminosae) reveals a varied history of site-specific and lineage-specific evolutionary rates and selection both within and between loci. LEGCYC genes are homologous to regulatory loci known to control floral symmetry and adaxial flower organ identity in Antirrhinum and its relatives. Within Lupinus, L. densiflorus is unusual in having flowers with a proportionally smaller standard (upright adaxial petals) and larger wings (lateral petals) than other lupin species. Phylogenetic estimates of the nonsynonymous/synonymous substitution rate ratio, omega, suggest that along the L. densiflorus lineage, positive selection (omega > 1) acted at some codon sites of one paralog, LEGCYC1B, and greater purifying selection (omega < 1) acted at some sites of the other paralog, LEGCYC1A. Overall, LEGCYC1A appears to be evolving faster than LEGCYC1B, and both paralogs are evolving faster than the internal transcribed spacer (ITS) region of nr DNA. The predominant historical pattern inferred is a highly heterogeneous "selectional mosaic" which we suggest may be typical of the teosinte branched 1-cycloidea-PCF (TCP) class of transcriptional activators, and possibly other genes. Codon models that do not account for both site-specific and lineage-specific variation in omega do not detect positive selection at these loci. We suggest a modification of existing branch-site models involving an additional omega parameter along the foreground branch, to account for the effects of both greater positive selection and greater purifying selection at different codon sites along a particular branch. The higher rates of evolution and congruent phylogenetic signal of both LEGCYC paralogs show promise for the use of these genes as markers for phylogeny reconstruction at low taxonomic levels in Genisteae [corrected]

Amino Acid Substitution↗