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At least 1,621 records · Page 90Linked to original sources
PubMed1987

Computation, rhythm, and cerebral slow waves.

The trajectories of data and modelling from formerly divergent research efforts now seem to be converging to an unexpected region of the phase space of neuroscience. Computational network theory and simulation assume that temporal rhythm may be a significant parameter for the successful organization of nonlinear analog computation effected by hierarchical sets of biological neurons and of nonbiological circuitry alike. For neurobiology, the apparently chaotic rhythms of cerebral compound field potentials--the electroencephalogram (EEG) and slow waves of event related brain potentials (ERBP)--have long been a phenomenological embarrassment, of only marginal clinical utility. But recent data from molecular biophysics, nonlinear dynamics, artificial intelligence, and scalp-conducted human electrocorticography suggest a possible functional role in the serial gating of neural network computations for the familiar theta-alpha-beta rhythms of the EEG clinic.

Auditory Perception↗
PubMed1998

Ultradian rhythms in Desmodium.

The leaves of Desmodium gyrans (L.F.) DC show circadian movements in the terminal and ultradian movements of the lateral leaflets. The movements are due to swelling and shrinking of motor cells in special organs. The anatomy of these pulvini is described for the lateral leaflets. Data from electrophysiological recordings using microelectrodes inserted into the lateral pulvini, together with treatments that affect the proton pumps and ion channels, have been used to develop a physiological model of the ultradian leaflet movement. It explains the oscillations in the motor cells as being due to a change between a pump state and depolarization. During the pump state, ions are taken up, causing water influx and swelling of the motor cells. Depolarization causes loss of ions and water efflux (the motor cells shrink). The roles of calcium and the phosphatidyl inositol signal chain are discussed on the basis of experiments using chemical agents that affect these processes. Since calcium oscillations are known to occur in organisms in both time and space, an attempt has been made to simulate the situation in Desmodium pulvini by a model of specially coupled oscillators. Effects of different other treatments of the lateral pulvini are discussed. Oscillations in the minute range seem to be more common and some might be related to turgor regulation and ion uptake comparable to the situation in Desmodium. The ultradian control of the lateral pulvini and the circadian control of the terminal pulvini are apparently based on different mechanisms.

Activity Cycles↗
PubMed1997

The visual contour in depth.

We asked subjects to match points on the surface of a smooth three-dimensional (3-D) shape with points on the surface of another object that was geometrically identical to the first object but was placed in a different pose, was differently textured, and was differently shaded. In all cases, the fiducial point was on the rim of one of the objects (i.e., the boundary of the visible region of the surface), whereas the matching point was well within the silhouette of the other object. This allowed us to draw (preliminary) conclusions concerning the way monocular human observers are able to handle the neighborhood of the rim, where the local slant assumes arbitrarily high values. All experiments were done in real space with real objects (no computer-simulated scenes), the points being indicated with laser beam illumination. The subject was given control over the direction of the laser beams and was thus able to perform the task by adjustment from the vantage position. We studied both consistency (whether the subject's judgments were invariant against changes of relative pose) and veridicality (whether the depth of the visual contour as calculated from the settings agreed with the true distance as measured by mechanical means). Subjects caught much of the 3-D structure of the contour but did deviate appreciably and apparently idiosyncratically from the true geometry.

Computer Graphics↗
PubMed1999

Microgravity cultivation of cells and tissues.

In vitro studies of cells and tissues in microgravity, either simulated by cultivation conditions on earth or actual, during spaceflight, are expected to help identify mechanisms underlying gravity sensing and transduction in biological organisms. In this paper, we review rotating bioreactor studies of engineered skeletal and cardiovascular tissues carried out in unit gravity, a four month long cartilage tissue engineering study carried out aboard the Mir Space Station, and the ongoing laboratory development and testing of a system for cell and tissue cultivation aboard the International Space Station.

Animals↗
PubMed1998

Characterizing global substates of myoglobin.

BACKGROUND: The massive amount of information generated from current molecular dynamics simulations makes the data difficult to analyze efficiently. Principal component analysis has been used for almost a century to detect and characterize data relationships and to reduce the dimensionality for problems in many fields. Here, we present an adaptation of principal component analysis using a partial singular value decomposition (SVD) for investigating both the localized and global motions of macromolecules. RESULTS: Configuration space projections from the SVD analysis of a variety of myoglobin simulations are used to characterize the dynamics of the protein. This technique reveals new dynamical motifs, which quantify proposed hierarchical structures of conformational substates for proteins and provide a means by which configuration space sampling efficiency may be probed. The SVD clearly shows that solvent effects facilitate transitions between global conformational substates for myoglobin molecular dynamics simulations. Lyapunov exponents calculated from the configuration space divergence of 15 trajectories agree with previous predictions for the chaotic behavior of complex protein systems. CONCLUSIONS: Configuration space projections provide invaluable information about protein motions that would be extremely difficult to obtain otherwise. While the configuration space for myoglobin is quite large, it does have structure. Our analysis of this structure shows that the protein hops between a number of distinct global conformational states, much like the local behavior observed for an individual residue.

Computer Simulation↗
PubMed2004

Comparison between 2D and 3D gradient-echo sequences for MRI of human lung ventilation with hyperpolarized 3He.

Images of hyperpolarized 3He were acquired during breath-hold in four healthy volunteers with the use of an optimized 3D gradient-echo sequence. The images were compared with existing 2D gradient-echo methods. The average SNR from a 13-mm-thick slice in the peripheral lung was 1.4 times greater with 3D. In the airways the average SNR was 1.7 times greater with 3D. The higher SNR of 3D was particularly evident when regions of unimpeded gas diffusion, such as the major airways, were imaged with thin slices. This is because diffusion dephasing due to the slice-encoding gradient is minimized with a 3D sequence. The in vivo experimental findings were substantiated with experiments on phantoms of free gas, which showed more than four times the SNR with 3D compared to 2D. Theoretical simulations of the 2D and 3D k-space filters were also performed to predict the SNR and spatial resolution observed in the experimental images.

Computer Simulation↗
PubMed2000

Spaceflight induces changes in splenocyte subpopulations: effectiveness of ground-based models.

Spaceflight produces changes in the immune system. The mechanisms for the alterations in immune function after spaceflight remain unclear due in part to the difficulties associated with conducting spaceflight research. The purpose of the following studies, therefore, was to create a ground-based protocol that can reproduce the immunological changes found after spaceflight, i.e., changes in splenic lymphocyte populations. Rats were exposed to either flight aboard the Space Shuttle Endeavor (STS-77) or ground-based simulations of various components of the spaceflight experience. The ground-based mock spaceflight was comprised of exposure to launch and landing loads and unloading of the hindlimbs. In addition, each component of this ground-based mock spaceflight was tested separately. The results were that spaceflight reduced splenic CD4(+) T (helper/inducer) cells and CD11b(+) (neutrophils/macrophages) cells. The ground-based simulations of spaceflight did not reproduce the same pattern of splenocyte changes. In fact, exposure to landing loads alone increased splenic CD4(+) T (helper/inducer) cells. These findings support the conclusion that the ground models tested did not induce similar changes in the immune system as did spaceflight. It is possible, therefore, that stressors/factors unique to the spaceflight experience impact the immune system in ways that cannot be currently, fully modeled on the ground.

Animals↗
PubMed2002

Three dimensional spatial memory and learning in real and virtual environments.

Human orientation and spatial cognition partly depends on our ability to remember sets of visual landmarks and imagine their relationship to us from a different viewpoint. We normally make large body rotations only about a single axis which is aligned with gravity. However, astronauts who try to recognize environments rotated in 3 dimensions report that their terrestrial ability to imagine the relative orientation of remembered landmarks does not easily generalize. The ability of human subjects to learn to mentally rotate a simple array of six objects around them was studied in 1-G laboratory experiments. Subjects were tested in a cubic chamber (n = 73) and a equivalent virtual environment (n = 24), analogous to the interior of a space station node module. A picture of an object was presented at the center of each wall. Subjects had to memorize the spatial relationships among the six objects and learn to predict the direction to a specific object if their body were in a specified 3D orientation. Percent correct learning curves and response times were measured. Most subjects achieved high accuracy from a given viewpoint within 20 trials, regardless of roll orientation, and learned a second view direction with equal or greater ease. Performance of the subject group that used a head mounted display/head tracker was qualitatively similar to that of the second group tested in a physical node simulator. Body position with respect to gravity had a significant but minor effect on performance of each group, suggesting that results may also apply to weightless situations. A correlation was found between task performance measures and conventional paper-and-pencil tests of field independence and 2&3 dimensional figure rotation ability.

Adolescent↗
PubMed2001

[Virtual reality in ophthalmological education].

We present a computer-based medical training workstation for the simulation of intraocular eye surgery. The surgeon manipulates two original instruments inside a mechanical model of the eye. The instrument positions are tracked by CCD cameras and monitored by a PC which renders the scenery using a computer-graphic model of the eye and the instruments. The simulator incorporates a model of the operation table, a mechanical eye, three CCD cameras for the position tracking, the stereo display, and a computer. The three cameras are mounted under the operation table from where they can observe the interior of the mechanical eye. Using small markers the cameras recognize the instruments and the eye. Their position and orientation in space is determined by stereoscopic back projection. The simulation runs with more than 20 frames per second and provides a realistic impression of the surgery. It includes the cold light source which can be moved inside the eye and the shadow of the instruments on the retina which is important for navigational purposes.

Computer Graphics↗
PubMed1990

Comparative effectiveness of a clinostat and a slow-turning lateral vessel at mimicking the ultrastructural effects of microgravity in plant cells.

The object of this research was to determine how effectively the actions of a clinostat and a fluid-filled, slow-turning lateral vessel (STLV) mimic the ultrastructural effects of microgravity in plant cells. We accomplished this by qualitatively and quantitatively comparing the ultrastructures of cells grown on clinostats and in an STLV with those of cells grown at 1 g and in microgravity aboard the Space Shuttle Columbia. Columella cells of Brassica perviridis seedlings grown in microgravity and in an STLV have similar structures. Both contain significantly more lipid bodies, less starch, and fewer dictyosomes than columella cells of seedlings grown at 1 g. Cells of seedlings grown on clinostats have significantly different ultrastructures from those grown in microgravity or in an STLV, indicating that clinostats do not mimic microgravity at the ultrastructural level. The similar structures of columella cells of seedlings grown in an STLV and in microgravity suggest that an STLV effectively mimics microgravity at the ultrastructural level.

Brassica↗
PubMed1997

Motion of the hindfoot after simulated arthrodesis.

Arthrodesis of the subtalar joint, triple arthrodesis (involving the subtalar, talonavicular, and calcaneocuboid joints), double arthrodesis (involving the talonavicular and calcaneocuboid joints), arthrodesis of the talonavicular joint, and arthrodesis of the calcaneocuboid joint were simulated in a cadaver model, and the range of motion of each joint not involved in the simulated arthrodesis was measured with a three-dimensional magnetic space tracking system. The excursion of the posterior tibial tendon was also measured under all of these conditions. We found that any combination of simulated arthrodeses that included the talonavicular joint severely limited the motion of the remaining joints to about 2 degrees and limited the excursion of the posterior tibial tendon to 25 per cent of the preoperative value. Simulated arthrodesis of the calcaneocuboid joint had little effect on the range of motion of the subtalar joint, and it reduced the range of motion of the talonavicular joint to a mean of 67 per cent of the preoperative value; a mean of 73 per cent of the excursion of the posterior tibial tendon was retained. After simulated arthrodesis of the subtalar joint, a mean of 26 per cent of the motion of the talonavicular joint, 56 per cent of the motion of the calcaneocuboid joint, and 46 per cent of the excursion of the posterior tibial tendon was retained. The talonavicular joint is the key joint of the triple joint complex. The talonavicular joint had the greatest range of motion, and simulated arthrodesis of this joint essentially eliminated motion of the other joints of the complex.

Arthrodesis↗
PubMed1993

[Space medicine and life sciences in space].

The examination of pathophysiological disturbances and the process of adaptation in man during space flight is not for optimizing of the biological systems during the training of cosmonauts and astronauts for their stay in space only. These results are also important for medical application on patients. In real microgravity disturbances of motor performances, coordination of movements, accuracy of movements, muscle function as well as structural changes in muscles is found in real microgravity. Spinal reflexes and the control of vestibular system on eye movements are also afflicted. Higher brain functions, especially associative reactions, critical abilities, memory, as well as high brain function like space orientation, body scheme control, geometric and arithmetic analysis and its reproduction, at last speech production, writing and reading are decreased. Vegetative disorders, bone decalcification, primary muscular atrophy occur as well as changes in sleep--wake regulation and diminishing of vigility. Disturbances of blood and body fluid circulation and biologic radiation damage are further effects of man space flight. Several problems of space adaptation can be studied with the methods of the simulated microgravity using the dry water immersion, examination and the bed rest model in special laboratories. The routine medicine is learning from the scientific results of the research in real and simulated microgravity.

Adaptation, Physiological↗
PubMed2002

Monte Carlo simulation of surface percent depth dose.

This work studied the surface percent depth dose of 6 and 15 MV X-rays, 10 x 10 cm2 and 20 x 20 cm2 fields by Monte Carlo simulation. The OMEGA/BEAM code, an EGS4 user code developed by the NRCC, was used. The linac, Siemens PRIMUS, was accurately modeled according to the ion chamber and CEA film measurement, and the phase space data generated from this linac were collected to simulate dose distribution in water. The water phantom had radius 30 cm and thickness 10 cm. The percent depth doses at zero depth, PDDsurface, for 6 MV X-rays were 13.85 +/- 0.11% and 23.21 +/- 0.20% for the 10 x 10 cm2 and 20 x 20 cm2 fields, respectively. For 15 MV X-rays, PDDsurface values were 8.83 +/- 0.07% and 18.60 +/- 0.12% for the 10 x 10 cm2 and 20 x 20 cm2 fields, respectively.

Humans↗
PubMed2001

Voxel-based morphometry using the RAVENS maps: methods and validation using simulated longitudinal atrophy.

Statistical analysis of anatomical maps in a stereotaxic space has been shown to be a useful tool in population-based studies for quantifying local anatomical differences or changes, without a priori assumptions about the location and extent of the regions of interest. This paper presents an extension and validation of a previously published methodology, referred to as RAVENS, for characterizing regional atrophy in the brain. A new method for elastic, volume-preserving spatial normalization, which allows for accurate quantification of very localized atrophy, is used. The RAVENS methodology was tested on images with simulated atrophy within two gyri: precentral and superior temporal. It was found to accurately determine the regions of atrophy, despite their localized nature and the interindividual variability of cortical structures. Moreover, it was found to perform substantially better than the voxel-based morphology method of SPM'99. Improved sensitivity was achieved at the expense of human effort involved in defining a number of sulcal curves that serve as constraints on the 3D elastic warping.

Atrophy↗
PubMed1992

Changes of brain response induced by simulated weightlessness.

The characteristics change of brain response was studied during 15 degrees head-down tilt (HDT) comparing with 45 degrees head-up tilt (HUT). The brain responses evaluated included the EEG power spectra change at rest and during mental arithmetic, and the event-related potentials (ERPs) of somatosensory, selective attention and mental arithmetic activities. The prominent feature of brain response change during HDT revealed that the brain function was inhibited to some extent. Such inhibition included that the significant increment of "40Hz" activity during HUT arithmetic almost disappeared during HDT arithmetic, and that the positive-potential effect induced by HDT presented in all kinds of ERPs measured, but the slow negative wave reflecting mental arithmetic and memory process was elongated. These data suggest that the brain function be affected profoundly by the simulated weightlessness, therefore, the brain function change during space flight should be studied systematically.

Adolescent↗
PubMed1993

Output space tracking control for above-knee prosthesis.

The control of a knee joint in an active above-knee prosthesis has been designed using the Lyapunov tracking method. A simulation of locomotion was done to prove that the tracking control in output space is a valuable real time control method for artificial legs. The data used for simulation was collected in able-bodied subjects while they walked on a powered treadmill. Human volunteers were braced with an ankle splint (limiting dorsi- and plantar flexion) and with a knee cage (limiting knee movements to the lateral plane). We studied the achieved tracking of the prescribed knee motion, deviations of the thigh movement from the prescribed trajectory, maximal angular deviations from the desired trajectory and the power consumption as functions of a limited maximal knee torque and a damping constant in the knee actuator. We found that the use of output tracking method is suitable for the design of appropriate hardware of an above-knee prosthesis and for real-time control.

Artificial Limbs↗
PubMed2003

Numerical simulations of self-focusing of ultrafast laser pulses.

Simulation of nonlinear propagation of intense ultrafast laser pulses is a hard problem, because of the steep spatial gradients and the temporal shocks that form during the propagation. In this study we adapt the iterative grid distribution method of Ren and Wang [J. Comput. Phys. 159, 246 (2000)] to solve the two-dimensional nonlinear Schrödinger equation with normal time dispersion, space-time focusing, and self-steepening. Our simulations show that, after the asymmetric temporal pulse splitting, the rear peak self-focuses faster than the front one. As a result, the collapse of the rear peak is arrested before that of the front peak. Unlike what has sometimes been conjectured, however, collapse of the two peaks is not arrested through multiple splittings, but rather through temporal dispersion.

Journal Article↗
PubMed1995

Influence of simulated microgravity on the exercise performance of Fischer 344 rats.

Measurements from mission specialists after space flights or from subjects subjected to head down tilt experiments have demonstrated a decrease in exercise performance. Similar decreases have been reported for rats that have participated in simulated microgravity studies using the head down-tail suspended method of Morey-Holton (HDS). Because it is unclear whether older animal populations would exhibit similar responses, we undertook a HDS study with Fischer 344 male rats.

Aging↗