Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “canopy”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 163 records · Page 9Linked to original sources

Drought Stress and Elevated CO(2) Effects on Soybean Ribulose Bisphosphate Carboxylase Activity and Canopy Photosynthetic Rates.

Soybean (Glycine max [L.] cv Bragg) was grown at 330 or 660 microliters CO(2) per liter in outdoor, controlled-environment chambers. When the plants were 50 days old, drought stress was imposed by gradually reducing irrigation each evening so that plants wilted earlier each succeeding day. On the ninth day, as the pots ran out of water CO(2) exchange rate (CER) decreased rapidly to near zero for the remainder of the day. Both CO(2)-enrichment and drought stress reduced the total (HCO(3) (-)/Mg(2+)-activated) extractable ribulose-1,5-bisphosphate carboxylase (RuBPCase) activity, as expressed on a chlorophyll basis. In addition, drought stress when canopy CER values and leaf water potentials were lowest, reduced the initial (nonactivated) RuBPCase activity by 50% compared to the corresponding unstressed treatments. This suggests that moderate to severe drought stress reduces the in vivo activation state of RuBPCase, as well as lowers the total activity. It is hypothesized that stromal acidification under drought stress causes the lowered initial RuBPCase activities. The K(m)(CO(2)) values of activated RuBPCase from stressed and unstressed plants were similar; 15.0 and 12.6 micromolar, respectively. RuBP levels were 10 to 30% lower in drought stressed as compared to unstressed treatments. However, RuBP levels increased from near zero at night to around 150 to 200 nanomoles per milligram chlorophyll during the day, even as water potentials and canopy CERs decreased. This suggests that the rapid decline in canopy CER cannot be attributed to drought stress induced limitations in the RuBP regeneration capability. Thus, in soybean leaves, a nonstomatal limitation of leaf photosynthesis under drought stress conditions appears due, in part, to a reduction of the in vivo activity of RuBPCase. Because initial RuBPCase activities were not reduced as much as canopy CER values, this enzymic effect does not explain entirely the response of soybean photosynthesis to drought stress.

Journal Article↗

Performance of trees in forest canopies: explorations with a bottom-up functional-structural plant growth model.

Here we present a functional-structural plant model that integrates the growth of metamers into a growing, three-dimensional tree structure, and study the effects of different constraints and strategies on tree performance in different canopies. The tree is a three-dimensional system of connected metamers, and growth is defined by the flush probability of metamers. Tree growth was simulated for different canopy light environments. The result suggest that: the constraints result in an exponential, logistic and decay phase; a mono-layered-leaf crown results from self-shading in a closed canopy; a strong apical control results in slender trees like tall stature species; the interaction between weak apical control and light response results in a crown architecture and performance known from short stature species in closed forest; correlated leaf traits explain interspecific differences in growth, survival and adult stature. The model successfully unravels the interaction effects of different constraints and strategies on tree growth in different canopy light environments.

Circadian Rhythm↗

Enhancement of rice canopy carbon gain by elevated CO(2) is sensitive to growth stage and leaf nitrogen concentration.

Increasing our understanding of the factors regulating seasonal changes in rice canopy carbon gain (C(gain): daily net photosynthesis -- night respiration) under elevated CO(2) concentrations ([CO(2)]) will reduce our uncertainty in predicting future rice yields and assist in the development of adaptation strategies. In this study we measured CO(2) exchange from rice (Oryza sativa) canopies grown at c. 360 and 690 micromol mol(-1)[CO(2)] in growth chambers continuously over three growing seasons. Stimulation of C(gain) by elevated [CO(2)] was 22-79% during vegetative growth, but decreased to between -12 and 5% after the grain-filling stage, resulting in a 7-22% net enhancement for the whole season. The decreased stimulation of C(gain) resulted mainly from decreased canopy net photosynthesis and partially from increased respiration. A decrease in canopy photosynthetic capacity was noted where leaf nitrogen (N) decreased. The effect of elevated [CO(2)] on leaf area was generally small, but most dramatic under ample N conditions; this increased the stimulation of whole-season C(gain). These results suggest that a decrease in C(gain) enhancement following elevated CO(2) levels is difficult to avoid, but that careful management of nitrogen levels can alter the whole-season C(gain) enhancement.

Carbon↗

A phase 3, randomized, double-blind, placebo-controlled, multicenter study to evaluate the efficacy and safety of vosoritide in children with hypochondroplasia: CANOPY HCH-3 study design.

BACKGROUND: Hypochondroplasia is a skeletal dysplasia characterized by disproportionate short stature that is caused by gain-of-function variants in the fibroblast growth factor receptor 3 gene (FGFR3), which negatively regulates endochondral bone growth. Current treatments are based on symptom management; there are no treatments targeting the signaling pathways that underlie hypochondroplasia. Vosoritide, a C-type natriuretic peptide analog that counteracts overactive FGFR3 signaling to stimulate endochondral bone growth, is approved for the treatment of achondroplasia in children. A phase 1/2 clinical trial demonstrated that vosoritide treatment for 1 year increased growth in children with hypochondroplasia and was well-tolerated. OBJECTIVES: The objectives of CANOPY HCH-3 are to evaluate the efficacy and safety of vosoritide for the treatment of hypochondroplasia in children. DESIGN: CANOPY HCH-3 was a phase 3, randomized, double-blind, placebo-controlled, multicenter study. METHODS AND ANALYSIS: Children aged &#x2265;3 to <18 years with confirmed hypochondroplasia who had &#x2265;6 months of pre-treatment standing height from a prior observational study before randomization were enrolled. Participants were randomized to receive 52 weeks of daily treatment with vosoritide or placebo, followed by 2 weeks of safety follow-up. The primary endpoint is change from baseline in annualized growth velocity at week 52 versus placebo. ETHICS: CANOPY HCH-3 was conducted in accordance with the Council for International Organizations of Medical Sciences International Ethical Guidelines, the principles of the Declaration of Helsinki and of Good Clinical Practice, and applicable laws and regulations. Protocols were approved by relevant local health authorities, ethics committees, and institutions. Written informed consent from the participant, or parent or legal guardian, was obtained prior to any study-related procedures being performed. DISCUSSION: CANOPY HCH-3 will provide further evidence for the efficacy and safety of vosoritide in children with hypochondroplasia.

clinical trial↗

Comparison of face mask, head hood, and canopy for breath sampling in flow-through indirect calorimetry to measure oxygen consumption and carbon dioxide production of preterm infants < 1500 grams.

Complete sampling of expired air is essential for accurate O2 consumption(CO2 production) [VO2(VCO2)] measurements with flow-through indirect calorimetry. In preterm infants complete sampling is critical, because only low sampling flows can be used. The accuracy of the various breath sampling systems at low flows and their patient compatibility is untested. We therefore measured 1) the accuracy of VO2(VCO2) measurements with a face mask, a head hood, and a canopy in vitro at low sampling flows; 2) the effect of breathing on measurements with the face mask; and 3) the effect of breath sampling systems on activity and body temperature of preterm infants. VO2(VCO2) were measured with a Deltatrac II. In vitro we used a methanol miniburner incorporated into a doll, which could simulate low VO2(VCO2) and tidal breathing. In vivo we studied seven preterm infants < 1500 g. With the face mask VO2(VCO2) measurements were accurate at a flow of 3 L/min (error -1 +/- 0.8%), when tidal volume was < 15 mL/breath and the distance between mask and manikin < 1 cm. With hood and canopy VO2(VCO2) were underestimated at a flow of 3 L/min (error -13 +/- 1% and -14 +/- 5%), and results were markedly influenced by body position. For accurate measurements, the hood needed a flow of 4.5 L/min, the canopy 8.3 L/min. In vivo the face mask did not increase heart rate, respiration, activity, or rectal temperature, but hood and canopy increased rectal temperature by 0.3-0.4 degree C. For VO2(VCO2) measurements in infants < 1500 g, a face mask should be used, which is accurate at low flows and does not change body temperature. Accuracy at low flows and patient compatibility of breath sampling systems should be evaluated and reported for VO2(VCO2) measurements in preterm infants.

Body Temperature↗

Effect of cloud cover on UVB exposure under tree canopies: will climate change affect UVB exposure?

The effect of cloud cover on the amount of solar UV radiation that reaches pedestrians under tree cover was evaluated with a three-dimensional canopy radiation transport model. The spatial distribution of UVB irradiance at the base of a regular array of spherical tree crowns was modeled under the full range of sky conditions. The spatial mean relative irradiance (I(r)) and erythemal irradiance of the entire below-canopy domain and the spatial mean relative irradiance and erythemal irradiance in the shaded regions of the domain were determined for solar zenith angles from 15 degrees to 60 degrees. The erythemal UV irradiance under skies with 50% or less cloud cover was not remarkably different from that under clear skies. In the shade, the actual irradiance was greater under partly cloudy than under clear skies. The mean ultraviolet protection factor for tree canopies under skies with 50% or less cloud cover was nearly equivalent to that for clear sky days. Regression equations of spatially averaged I(r) as a function of cloud cover fraction, solar zenith angle and canopy cover were used to predict the variation in erythemal irradiance in different land uses across Baltimore, MD.

Journal Article↗

Intracanopy lighting of cowpea canopies in controlled environments.

Traditional designs for plant-growth lighting in space life support systems irradiate tops of closed foliar canopies while canopy understories are light limited. "Intracanopy lighting," a technique whereby plants are allowed to grow up and around multiple layers of low-intensity lamps that irradiate interior portions of canopies, can potentially enhance productivity while reducing overall energy consumption. Intracanopy lighting of cowpea (Vigna unguiculata L. Walp) was optimized by varying stand densities and lining growth compartments with light-scattering or reflective films. Yield rates using intracanopy lighting were less than those obtained with traditional lighting strategies. However, yield efficiencies and energetic conversion efficiencies, parameters that put edible yield in terms of inedible biomass, energetic, spatial, and temporal penalties, indicate intracanopy lighting is more efficient in crop production. Single-leaf photosynthetic rates indicate all leaves participate in net carbon gain regardless of age and position within a canopy.

Biomass↗

Predicting lettuce canopy photosynthesis with statistical and neural network models.

An artificial neural network (NN) and a statistical regression model were developed to predict canopy photosynthetic rates (Pn) for 'Waldman's Green' leaf lettuce (Latuca sativa L.). All data used to develop and test the models were collected for crop stands grown hydroponically and under controlled-environment conditions. In the NN and regression models, canopy Pn was predicted as a function of three independent variables: shootzone CO2 concentration (600 to 1500 micromoles mol-1), photosynthetic photon flux (PPF) (600 to 1100 micromoles m-2 s-1), and canopy age (10 to 20 days after planting). The models were used to determine the combinations of CO2 and PPF setpoints required each day to maintain maximum canopy Pn. The statistical model (a third-order polynomial) predicted Pn more accurately than the simple NN (a three-layer, fully connected net). Over an 11-day validation period, average percent difference between predicted and actual Pn was 12.3% and 24.6% for the statistical and NN models, respectively. Both models lost considerable accuracy when used to determine relatively long-range Pn predictions (> or = 6 days into the future).

Carbon Dioxide↗

[Temporal-spatial distribution characteristics of microclimate in tropical secondary forest canopy gap in Xishuangbanna].

Based on the data obtained from vertical gradient measurements of microclimatic elements of canopy gap in tropical secondary forest of Xishuangbanna in fog-cool and dry-hot season, the daytime characteristics of temporal-spatial distribution and variation of trunk surface temperature, air temperature, water vapor pressure and relative humidity in canopy gap were discussed. The data showed that gap edge had not only a remarkable thermal effect, but also a significant water vapor effect. These effects resulted in environmental heterogeneity in canopy gap. The results provided a basis for further studying heat and water vapor transport, microclimatic formation, biodiversity, and forest succession in canopy gap.

Climate↗

[Relationship between canopy reflectance and plant water status of wheat].

The study on the relationship between canopy reflectance characteristics and plant water status of wheat under different soil water and nitrogen levels showed that the water contents of canopy leaf and plant had a significant correlation with the spectral reflectance of 460-510, 610-680, 1480-1500 and 810-870 nm bands at different growth stages and that of 460-1500 and 560-1480 nm bands over the whole growth period. The correlation degrees of canopy leaf (CL), upper-layer leaf (UL) and lower-layer leaf (LL) water content with spectral index were in the order of CL>LL>UL. In addition, the water contents of canopy leaf and plant after jointing stage were negatively linearly related to the ratio index R(610, 560) and spectral index (R(610, 560)/ND(810, 610)), but positively correlated with the normalized difference index ((R810 - R610)/(R810 + R610)), indicating that spectral index (R(610, 560)/ND(810, 610)) could be a good indicator for monitoring water status in wheat plant.

Nitrogen↗

[Responses of canopy stomatal conductance of Acacia mangium forest to environmental driving factors].

Employing Granierś probes, this paper measured the sap flow of 14 sample trees in an Acacia mangium forest on the Heshan hilly lands of Guangdong Province, and recorded the photosynthetic active radiation (PAR), air relative humidity (RH) , and air temperature (T) above the forest canopy. The whole-tree transpiration (E), stand transpiration (Et), and mean canopy stomatal conductance (gc) were calculated, and the relationships between tree morphological characters and whole-tree water use as well as the responses of gc to PAR and vapor pressure deficit (D) were analyzed. The results showed that the whole-tree transpiration had logarithmical positive correlations with tree diameter at breast height (DBH) (P < 0.0001) , sapwood area (P < 0.0001) and canopy size (P = 0.0007), and an exponential positive correlation with tree height (P = 0. 014). The maximum gc (gc max) changed with PAR hyperbolically (P < 0.0001), and with D logarithmically (P < 0.0001). The sap flow measurement system used in this study was reliable and accurate in estimating the transpiration of whole-tree and stand and the canopy stomatal conductance, being an effective tool in studying the relationships between forest water use and environmental factors.

Acacia↗

[Canopy rainfall storage capacity of tropical seasonal rainforest and rubber plantation in Xishuangbanna].

Based on the 2003-2004 laboratory and field observation data, and with scaling-up method, this paper studied the canopy rainfall storage capacity of tropical seasonal rainforest and rubber plantation in Xishuangbanna. The results showed that the canopy rainfall storage capacity was 0.45-0.79 mm for tropical seasonal rainforest and 0.48-0.71 mm for rubber plantation, and that of the branch and bark accounted for >50 % of the total. For these two forests, the canopy rainfall storage capacity was much higher in foggy season (from November to February) and dry-hot season (from March to April) than in rainy season (from May to October), and the duration needed to reach water saturation was about 5 min for leaf, 2-3 h for bark, and 2. 5-4 h for branch. During the processes of wetting and air-drying, leaf was easier while branch and bark were somewhat difficult to hold water and then be air-dried, suggesting that leaf played an important role in intercepting rainfall in short-duration rainfall events, while branch and bark could work much better in doing this in long-duration or high-intensity rainfall events. Compared with rubber plantation, tropical seasonal rainforest had a stronger rainfall-storage capacity due to its multi-layer structure of canopy and excellent water-holding performance.

China↗

Hazard potential of ejection with canopy fragmentation.

The hazard potential of ejection with canopy fragmentation was evaluated by horizontal sled tests. A series of 14 ejections of tandem seats with 1st or 95th percentile anthropometric dummies were performed at sled speeds of 0, 150, 350, and 600 knots. Canopy-mounted miniature detonating cords (MDC) were fired in nine and not fired in five ejections. Maximal impact loads on each dummy's neck, knees, and shoulders were measured, and noise levels inside and outside the helmet recorded. The acceleration waveform for each dummy was recorded and used to calculate a dynamic response index (DRI) to assess the risk of spinal injury. Impacts with canopy fragments during ejections resulted in minor visible damages to the dummies and their equipment regardless of MDC firing. It was noted that MDC firing significantly attenuated the mean neck load (231 +/- 63 kg, unfired, to 108 +/- 20 kg, fired, p < 0.05). Noise levels with MDC firing averaged 162 dB. The mean DRI of dummy Gz for the small dummies was significantly greater than for large dummies (20.8 +/- 0.44 and 18.05 +/- 0.98, respectively, p < 0.05). We conclude that superficial injuries to ejecting pilots and their equipment is not a hazard with the canopy fragmentation system; however, spinal injury may occur at rates of 5 to 50% depending on the size of the pilot.

Aircraft↗

Short-term changes in carbon isotope composition of soluble carbohydrates and starch: from canopy leaves to the root system.

Changes in the 13C discrimination of current leaf photosynthesis might have profound impacts on root respiratory substrates. Therefore, the aim of this study was (1) to refine a method for the isolation of root and leaf starch and soluble sugars (neutral fraction) for stable carbon isotope analysis and (2) to assess the short-term temporal variability of the C isotope composition (delta13C) of starch and of the neutral fraction of beech roots and leaves at different canopy heights. An existing method for isolating starch for stable C isotope analysis based on enzymatic hydrolysis was modified to account for the low starch content of the samples. This was achieved by removing the enzyme (alpha-amylase) by ultrafiltration after the hydrolysis, resulting in very low carbon blanks. The neutral fraction was separated from organic acids and cations by ion-exchange chromatography. An anion-exchange resin in the [HCO3]--form was chosen that ensured high precision of C blanks. Beech leaves at 5, 10 and 20 m above the forest floor as well as roots were sampled six times during a day/night cycle in July 2003. Delta13C values of bulk material, starch and the neutral fraction increased from the lower to the higher canopy with mean differences between 5 and 20 m of 3.8, 3.4 and 2.7 per thousand for the delta13C values of starch, neutral fraction and bulk foliage, respectively. The delta13C value of foliar starch increased from the morning to the afternoon and decreased during the night, but diurnal differences (up to 3.1 per thousand) were only statistically significant for leaves sampled at 5 and 10 m height. In roots, no diurnal variation in the delta13C of starch was observed during the short time frame of one day and the delta13C of the neutral fraction did not differ between samples taken at 16:30 and 22:00. Calculated delta13C values of starch, which was mobilised during the night, were more positive than the total starch (all sampling times pooled) in leaves. Furthermore, the delta13C values of mobilised starch were approximately 5 per thousand more positive than that of the mobilised neutral fraction. Hence, the delta13C of potential sources for export from canopy leaves to roots varied considerably in their C isotope composition.

Carbohydrates↗

Regeneration of Rhizophora mangle in a Caribbean mangrove forest: interacting effects of canopy disturbance and a stem-boring beetle.

Current theory predicts that in low-density, seed-limited plant populations, seed predation will be more important than competition in determining the number of individuals that reach maturity. However, when plant density is high, competition for microsites suitable for establishment and growth is expected to have a relatively greater effect. This dichotomous perspective does not account for situations in which the risk of seed predation differs inside versus outside recruitment microsites. We report the results of a field experiment and sampling studies that demonstrate such an interaction between microsite quality and the risk of propagule predation in mangrove forests on the Caribbean coast of Panama, where it appears to play a key role in shaping the demography and dynamics of the mangrove, Rhizophora mangle. Rhizophora's water-borne propagules establish wherever they strand, but long-term sampling revealed that only those that do so in or near lightning-created canopy gaps survive and grow to maturity. These microsites afford better growth conditions than the surrounding understory and, as importantly, provide a refuge from predation by the scolytid beetle, Coccotrypes rhizophorae. This refuge effect was confirmed with a field experiment in which Rhizophora seedlings were planted at different positions relative to gap edges, from 5 m inside to 20 m outside the gap. Mortality due to beetle attack increased linearly from an average of 10% inside a gap to 72% at 20 m into the forest. The interaction between canopy disturbance and propagule predation may be having a large impact on the composition of our study forests. Being shade-tolerant, Rhizophora seedlings that escape or survive beetle attack can persist in the understory for years. However, the high rate of beetle-induced mortality effectively eliminates the contribution of advance regeneration by Rhizophora saplings to gap succession. This may explain why the shade-intolerant mangrove, Laguncularia racemosa, is able to co-dominate the canopy in low intertidal forests at our study sites.

Animals↗

Diurnal and spatial patterns of Phytoseiidae in the citrus canopy.

Phytoseiid mites were sampled in a grapefruit orchard at various times of the day to study their diurnal and seasonal distributions in the tree canopy. Samples were collected on 14, 20 and 28 October 1999 at 2 h intervals from 0600 to 2200 h. Similar samples were collected in a grapefruit orchard at 3 h intervals from 0600 to 2100 h on 9 and 16 March and on 17 and 24 August 2000 for phytoseiid mites. No differences in numbers of phytoseiid motiles were observed among the hours sampled in any of the three months. However, significant differences were observed in the number of phytoseiids per leaf based on location within the tree (eastern, western sides of the canopy or interior). Interior leaves collected in March and August 2000 had higher numbers of phytoseiids than exterior leaves taken from either the eastern or western sides of the tree canopy. Phytoseiids were more abundant in the March 2000 samples (mean = 1.10 phytoseiids/leaf) than in either October 1999 or August 2000 samples (mean = 0.16 and 0.19 phytoseiids/leaf, respectively). Prevalent phytoseiid species were Typhlodromalus peregrinus (Muma) (42.1%) and Iphiseiodes quadripilis (Banks) (50.4%) in October 1999, Typhlodromalus peregrinus (Muma) (76.2%) in March 2000, and Euseius mesembrinus (Dean) (54%) in August 2000.

Animals↗

Loss of particulate contaminants from plant canopies under wet and dry conditions.

There is a requirement for data describing the loss with time of particulate contamination from plant canopies. Measurements were made of the loss rates of monodispersed silica spheres (three sizes, with Mass Median Aerodynamic Diameters (MMADs) 1.9, 5.3 and 8.4 microm) from wheat (Triticum aestivum) and broad bean (Vicia faba) canopies. The spheres were labelled with tracers detectable by Instrumental Neutron Activation Analysis (INAA). Canopies were contaminated under realistic turbulence conditions in a wind tunnel, then removed to sheltered and exposed field sites or to a glasshouse containing a rain simulator. Samples were taken periodically, and the level of contamination per plant determined by INAA. Statistical analysis of the resulting data suggested an offset exponential loss model, with a residue of deposit that is not lost over time. Loss half-lives in the order of 1-2 days were obtained for an exposed wheat crop and 3-4 days for a partially sheltered wheat crop, with permanent residues of initial deposit for the exposed crop of 4-8%, and for the partially sheltered crop of 22-52%. A broad bean crop under glasshouse conditions showed loss half-lives of 0.5-1.5 days with residues of 22-26% initial contamination. A double exponential loss model also fitted the data well in some cases, and it is possible that a slow loss of the residual deposit occurs, being masked by noise in the current data set.

Journal Article↗

Efficient retrieval of vegetation leaf area index and canopy clumping factor from satellite data to support pollutant deposition assessments.

Canopy leaf area index (LAI) is an important structural parameter of the vegetation controlling pollutant uptake by terrestrial ecosystems. This paper presents a computationally efficient algorithm for retrieval of vegetation LAI and canopy clumping factor from satellite data using observed Simple Ratios (SR) of near-infrared to red reflectance. The method employs numerical inversion of a physics-based analytical canopy radiative transfer model that simulates the bi-directional reflectance distribution function (BRDF). The algorithm is independent of ecosystem type. The method is applied to 1-km resolution AVHRR satellite images to retrieve a geo-referenced data set of monthly LAI values for the conterminous USA. Satellite-based LAI estimates are compared against independent ground LAI measurements over a range of ecosystem types. Verification results suggest that the new algorithm represents a viable approach to LAI retrieval at continental scale, and can facilitate spatially explicit studies of regional pollutant deposition and trace gas exchange.

Algorithms↗