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Correction of timing errors in photomultiplier tubes used in phase-modulation fluorometry.

The measurement of fluorescence lifetimes is known to be hindered by the wavelength-dependent and photocathode area-dependent time response of photomultiplier tubes. A simple and direct method is described to minimize these effects in photomultiplier tubes used for phase-modulation fluorometry. Reference fluorophores of known lifetime were used in place of the usual scattering reference. The emission wavelengths of the reference and sample were matched by either filters or a monochromator, and the use of a fluorophore rather than a scatterer decreases the differences in spatial distribution of light emanating from the reference and sample. Thus photomultiplier tube artifacts are minimized. Five reference fluorophores were selected on the basis of availability, ease of solution preparation, and constancy of lifetime with temperature and emission wavelength. These compounds are p-terphenyl, PPO, PPD, POPOP and dimethyl POPOP. These compounds are dissolved in ethanol to give standard solutions that can be used over the temperature range from -55 to +55 degrees C. Purging with inert gas is not necessary. The measured phase and modulation of the reference solution is used, in conjunction with the known reference lifetime, to calculate the actual phase and modulation of the excitation beam. The use of standard fluorophores does not require separate experiments to quantify photomultiplier effects, and does not increase the time required for the measurement of fluorescence lifetimes. Examples are presented which demonstrate the elimination of artifactual photomultiplier effects in measurements of the lifetimes of NADH (0.4 ns) and indole solutions quenched by iodide. In addition, the use of these reference solutions increases the accuracy of fluorescence lifetime measurements ranging to 30 ns. We judge this method to provide more reliable lifetime measurements by the phase and modulation method. The test solutions and procedures we describe may be used by other laboratories to evaluate the performance of their phase fluorometers.

Indicators and Reagents↗

Structures, bonding, and reaction chemistry of the neutral organogallium(I) compounds (GaAr)n(n = 1 or 2) (Ar = terphenyl or related ligand): an experimental investigation of Ga-Ga multiple bonding.

The synthesis, structure, and properties of several new organogallium(I) compounds are reported. The monovalent compounds GaAr* (Ar* = C(6)H(3)-2,6-Trip(2), Trip = C(6)H(2)-2,4,6-Pr(i)()(3), 1), GaAr# (Ar# = C(6)H(3)-2,6(Bu(t)Dipp)(2), Bu(t)Dipp = C(6)H(2)-2,6-Pr(i)(2)-4-Bu(t)(), 4), and the dimeric (GaAr')(2) (Ar' = C(6)H(3)-2,6-Dipp(2), Dipp = C(6)H(3)-2,6-Pr(i)(2), 6) were synthesized by the reaction of "GaI" with (Et(2)O)LiAr*, (Et(2)O)LiAr# (3), or (LiAr')(2). Compounds 1 and 4 were isolated as green crystals, whereas 6 was obtained as a brown-red crystalline solid. All three compounds dissolved in hydrocarbon solvents to give green solutions and almost identical UV/visible spectra. Cryoscopy of 1 and 6 showed that they were monomeric in cyclohexane. Crystals of 1 and 4 were unsuitable for X-ray crystal structure determinations, but an X-ray data set for 6 showed that it was weakly dimerized in the solid with a long Ga-Ga bond of 2.6268(7) A and a trans-bent CGaGaC core array. The 1,2-diiodo-1,2-diaryldigallane compounds [Ga(Ar*)I](2) (2), [Ga(Ar#)I](2) (5), and [Ga(Ar')I](2) (7) were isolated as byproducts of the synthesis of 1, 4, and 6. The crystal structures of 2 and 7 showed that they had planar ICGaGaCI core arrays with Ga-Ga distances near 2.49 A, consistent with Ga-Ga single bonding. Treatment of 1, 4, and 6 with B(C(6)F(5))(3) immediately afforded the 1:1 donor-acceptor complexes ArGa[B(C(6)F(5))(3)] (Ar = Ar*, 8; Ar#, 9; Ar', 10) that featured almost linear gallium coordination, Ga-B distances near the sum of the covalent radii of gallium and boron, as well as some close Ga...F contacts. Compound 1 also reacted with Fe(CO)(5) under ambient conditions to give Ar*GaFe(CO)(4) (11), which had been previously synthesized by the reaction of GaAr*Cl(2) with Na(2)Fe(CO)(4). Reaction of 1 with 2,3-dimethyl-1,3-butadiene afforded the compound [Ar*GaCH(2)C(Me)C(Me)CH(2)]2 (12) that had a 10-membered 1,5-Ga(2)C(8) ring with no Ga-Ga interaction. Stirring 1 or 6 with sodium readily gave Na(2)[Ar*GaGaAr*] (13) and Na(2)(Ar'GaGaAr') (14). The former species 13 had been synthesized previously by reduction of GaAr*Cl(2) with sodium and was described as having a Ga-Ga triple bond because of the short Ga-Ga distance and the electronic relationship between [Ar*GaGaAr*](2-) and the corresponding neutral group 14 alkyne analogues. Compound 14 has a similar structure featuring a trans-bent CGaGaC core, bridged by sodiums which were also coordinated to the flanking aryl rings of the Ar' ligands. The Ga-Ga bond length was found to be 2.347(1) A, which is slightly (ca. 0.02 A) longer than that reported for 13. Reaction of Ga[N(Dipp)C(Me)](2)CH, 15 (i.e., GaN(wedge)NDipp(2)), which is sterically related to 1, 4, and 6, with Fe(CO)(5) yielded Dipp(2)N(wedge)NGaFe(CO)(4) (16), whose Ga-Fe bond is slightly longer than that observed in 11. Reaction of the less bulky LiAr"(Ar"= C(6)H(3)-2,6-Mes(2)) with "GaI" afforded the new paramagnetic cluster Ga(11)Ar(4)" (17). The ready dissociation of 1, 4, and 6 in solution, the long Ga-Ga distance in 6, and the chemistry of these compounds showed that the Ga-Ga bonds are significantly weaker than single bonds. The reduction of 1 and 6 with sodium to give 13 and 14 supplies two electrons to the di-gallium unit to generate a single bond (in addition to the weak interaction in the neutral precursor) with retention of the trans-bent geometry. It was concluded that the stability of 13 and 14 depends on the matching size of the sodium ion, and the presence of Na-Ga and Na-Ar interactions that stabilize their Na(2)Ga(2) core structures.

Journal Article↗

Two novel phenylacetoxylated p-terphenyls from Thelephora ganbajun Zang.

Two novel phenylacetoxylated p-terphenyl derivatives, namely ganbajunin F (6'-methoxy-2'-phenylacetoxy-3', 4, 4", 5'-tetrahydroxy- p-terphenyl), and ganbajunin G (5'-methoxy-2'-phenylacetoxy-3', 4, 4", 6'-tetrahydroxy-p-terphenyl), together with a known compound cycloleucomelone were isolated from the fruiting bodies of Thelephora ganbajun Zang. Their structures were established on the basis of spectral (MS, IR, NMR, HMBC, HMQC measurement) and chemical evidence.

Basidiomycota↗

Synthesis, (9)Be NMR Spectroscopy, and Structural Characterization of Sterically Encumbered Beryllium Compounds.

The use of the terphenyl substituent -C(6)H(3)-2,6-Mes(2) (abbreviated Ar) has permitted the synthesis of several new low-coordinate beryllium compounds. Reaction of 1 equiv of LiAr with BeCl(2)(OEt(2))(2) or BeBr(2)(OEt(2))(2) (1) gives the monomeric complexes ArBeX(OEt(2)) (X = Cl (2); Br (3) featuring three-coordinate berylliums. Treatment of 2 with 1 equiv of LiSMes (Mes = -C(6)H(2)-2,4,6-t-Bu(3)) affords the three-coordinate thiolate derivative ArBeSMes(OEt(2)) (4). The reaction of 2 with LiNHPh, LiNHSiPh(3), or LiN(SiMe(3))(2) affords the unstable dimer (ArBeNHPh)(2) (5) or the monomers ArBeNHSiPh(3)(OEt(2)) (6) and ArBeN(SiMe(3))(2) (7). The last is the first example of a two-coordinate beryllium center in the solid state. The addition of 1 equiv of 2 to NaMo(eta(5)-C(5)H(5))(CO)(3) gives the isocarbonyl complex Ar(THF)(2)Be(OC)(3)Mo(eta(5)-C(5)H(5)) (8), which features four-coordinate beryllium bound to Ar, two THF ligands, and an oxygen from one of the molybdenum-bound carbonyls. Reaction of 2 with a 1:1 mixture of LiN(SiMe(3))(2) and PhCN affords the six-membered-ring compound PhC(NSiMe(3))(2)(BeCl)(2)N(SiMe(3))(2) (9) and the four-coordinate monomer Be{(NSiMe(3))(2)CPh}(2) (10). Compounds 1-10 were characterized by X-ray crystallography, and 1 and 4 and 6-10 were also characterized by (1)H, (9)Be, and (13)C NMR spectroscopy. X-ray data at 130 K (1-9) or 185 K (10) with Mo Kalpha (lambda = 0.710 73 Å) (1, 2a, 3, 7, 8) or Cu Kalpha (lambda = 1.541 78 Å) (2b, 4-6, 9, 10). BeBr(2)(OEt(2))(2) (1), a = 11.690(5) Å, b = 10.191(3) Å, c = 12.131(5) Å, beta = 114.67(3) degrees, V = 1313.3(9) Å(3), space group P2(1)/n, Z = 4, R(1) = 0.062; ArBeCl(OEt(2)) (2a), a = 13.136(3) Å, b = 13.877(3) Å, c = 28.092(6) Å, V = 5121(2) Å(3), space group Pbca, Z = 8, R(1) = 0.058; ArBeCl(OEt(2)) (2b), a = 8.857(1) Å, b = 8.8977(9) Å, c = 18.198(7) Å, alpha = 86.437(8) degrees, beta = 82.677(8) degrees, gamma = 62.405(7) degrees, V = 1260.5(2) Å(3), space group P&onemacr;, Z = 2, R(1) = 0.048; ArBeBr(OEt(2)) (3), a = 8.873(5) Å, b = 8.847(5) Å, c = 18.251(7) Å, alpha = 86.54(4) degrees, beta = 83.17(4) degrees, gamma = 64.14(4) degrees, V = 1280(1) Å(3), space group P&onemacr;, Z = 2, R(1) = 0.071; ArBeSMes(OEt(2)).0.5C(6)H(14) (4.0.5C(6)H(14)), a = 9.732(1) Å, b = 11.190(1) Å, c = 21.841(2) Å, alpha = 75.225(7) degrees, beta = 81.137(8) degrees, gamma = 73.382(8) degrees, V = 2195.3(4) Å(3), space group P&onemacr;, Z = 2, R(1) = 0.062; (ArBeNHPh)(2).C(4)H(10)O (5.C(4)H(10)O), a = 11.894(2) Å, b = 12.212(2) Å, c = 18.709(3) Å, beta = 99.24(1) degrees, V = 2682.4(7) Å(3), space group P2(1), Z = 2, R(1) = 0.045; ArBeNHSiPh(3)(OEt(2)) (6), a = 11.959(2) Å, b = 16.655(2) Å, c = 19.718(2) Å, beta = 105.368(9) degrees, V = 3786.9(8) Å(3), space group P2(1)/c, Z = 4, R(1) = 0.047; ArBeN(SiMe(3))(2) (7), a = 12.623(3) Å, b = 15.404(4) Å, c = 15.502(3) Å, V = 3014(1) Å(3), space group Pbcn, Z = 4, R(1) = 0.046; Ar(THF)(2)Be(OC)(3)Mo(eta(5)-C(5)H(5)).2C(7)H(8) (8.2C(7)H(8)), a = 19.111(4) Å, b = 11.976(3) Å, b = 21.241(5) Å, beta = 103.47(2) degrees, V = 4728(2) Å(3), space group P2(1)/c, Z = 4, R(1) = 0.049; PhC(NSiMe(3))(2)(BeCl)(2)N(SiMe(3))(2) (9), a = 19.996(4) Å, b = 14.816(2) Å, c = 20.183(4) Å, V = 5979(2)Å(3), space group Pbca, Z = 8, R(1) = 0.043; Be{(NSiMe(3))(2)CPh}(2) (10), a = 20.022(2) Å, b = 9.7161(9) Å, c = 19.456(2) Å, beta = 11.392(8) degrees, V = 3524.1(6) Å(3), space group P2(1)/c, Z = 4, R(1) = 0.075.

Journal Article↗

Application of a reference convolution method to tryptophan fluorescence in proteins. A refined description of rotational dynamics.

A reference method for the deconvolution of polarized fluorescence decay data is described. Fluorescence lifetime determinations for p-terphenyl, p-bis[2-(5-phenyloxazolyl)]benzene and N-acetyltryptophanamide (AcTrpNH2) show that with this method more reliable fits of the decays can be made than with the scatterer method, which is most frequently used. Analysis of the AcTrpNH2 decay with p-terphenyl as the reference compound yields an excellent fit with lifetimes of 2.985 ns for AcTrpNH2 and 1.099 ns for p-terphenyl (20 degrees C), whereas the AcTrpNH2 decay cannot be satisfactorily fitted when the scatterer method is used. The frequency of the detected photons is varied to determine the conditions where pulse pile-up starts to affect the measured decays. At detection frequencies of 5 kHz and 15 kHz, which corresponds to 1.7% and 5% respectively of the rate of the excitation photons no effects are found. Decays measured at 30 kHz (10%) are distorted, indicating that pile-up effects play a role at this frequency. The fluorescence and fluorescence anisotropy decays of the tryptophan residues in the proteins human serum albumin, horse liver alcohol dehydrogenase and lysozyme have been reanalysed with the reference method. The single tryptophan residue of the albumin is shown to be characterized by a triple-exponential fluorescence decay. The anisotropy decay of albumin was found to be mono-exponential with a rotational correlation time of 26 ns (20 degrees C). The alcohol dehydrogenase has two different tryptophan residues to which single lifetimes are assigned. It is found that the rotational correlation time for the dehydrogenase changes with excitation wavelength (33 ns for lambda ex = 295 nm and 36 ns for lambda ex = 300 nm at 20 degrees C), indicating a nonspherical protein molecule. Lysozyme has six tryptophan residues, which give rise to a triple-exponential fluorescence decay. A single-exponential decay with a rotational correlation time of 3.8 ns is found for the anisotropy. This correlation time is significantly shorter than that arising from the overall rotation and probably originates from intramolecular, segmental motion.

Fluorescence Polarization↗

Depth distribution of irradiation-induced cross-linking in aromatic self-assembled monolayers.

Pristine and strongly irradiated self-assembled monolayers of [1,1':4',1' '-terphenyl]-4,4' '-dimethanethiol (TPDMT) on Au have been characterized by near-edge X-ray absorption fine structure spectroscopy using partial electron yield acquisition mode. The TPDMT films were found to be extremely stable toward electron irradiation, which is explained by cross-linking between the aromatic backbones. In addition, we assume that a large delocalization and a strong relaxation of the initial electronic excitations in the densely packed film contributed to the film stability. The data analysis implies an inhomogeneous distribution of the irradiation-induced dehydrogenation and cross-linking of the terphenyl moieties in the TPDMT film, being most pronounced close to the film-ambient interface. The inhomogeneity was explained by quenching of the electronically excited C-H states via dipole-dipole interaction with the states' image at the metal surface, which has a reduced probability with increasing separation from the metal surface. Generally, the results suggest the importance of relaxation processes for the response of self-assembled monolayers to ionizing radiation.

Cross-Linking Reagents↗

Effects of polychlorinated terphenyls and paraffins on rat liver microsomal cytochrome P-450 and in vitro metabolic activities.

The polychlorinated terphenyl Aroclor 5460 and the polychlorinated paraffins Witaclor 171 P and Witaclor 149 increased to different degrees the total microsomal concentration of cytochrome P-450 in the rat liver after intraperitoneal injection of 0.3, 1.0, and 1.0 g . kg-1 body weight, respectively, each day for four days. The multiple forms of cytochrome P-450 were affected differently with an induction of RLvMc P-450(50) and RLvMc P-450(54) by all chemicals, and an additional induction of RLvMc P-450(55) by the polychlorinated terphenyl. The rat liver weights were extensively increased after treatment with the polychlorinated paraffins. Alterations were found in the in vitro metabolism of biphenyl, benzo(a)pyrene and the steroid hormones, 4-androstene-3,17-dione and 5 alpha-androstane-3 alpha, 17 beta-diol, after exposure to all chemicals. Changes in the in vitro formation of benzo(a)pyrene metabolites were found to correlate with changes in the multiple forms of cytochrome P-450. The present study demonstrate that only limited information can be obtained from alterations in the total concentration of cytochrome P-450 and show the importance of studying changes in the multiple forms and the metabolism of different substrates. Our results further indicate that exposure to any of the investigated polychlorinated chemicals may alter the biological effects of other environmental contaminants, drugs and endogenous substances which are metabolized by the cytochrome P-450 enzyme system.

Animals↗

Isolation and characterisation of a prenylated p-terphenyl metabolite of Aspergillus candidus possessing potent and selective cytotoxic activity; studies on mechanism of action.

We describe the discovery and properties of a prenylated p-terphenyl metabolite of the fungus Aspergillus candidus. The compound (1) possesses potent cytotoxic activity against a range of tumour and other hyper-proliferative cell lines. Cell cycle analysis shows that in mouse keratinocyte (BALB/MK) cells treated with 1, the cell cycle is arrested in early S phase, indicative of an antimetabolite effect. Furthermore, cellular cytotoxicity can be reversed by addition of exogenous pyrimidine but not purine nucleosides to the cell culture medium. It is therefore likely that compound 1 selectively inhibits pyrimidine biosynthesis, and it is this property which accounts for its potent cytotoxic properties.

Animals↗

Abnormal temperature dependence of photoemission intensity mediated by thermally driven reorientation of a monomolecular film.

The photoemission intensities of organic molecular layers generally obey the Debye-Waller temperature dependence but not always. With the example of a monomolecular film formed from [1,1';4',1''-terphenyl]-4,4''-dimethanethiol, we show that pronounced deviations from Debye-Waller temperature behavior are possible and are likely caused by temperature-dependent changes in molecular orientation.

Membranes, Artificial↗

Evaluation of laser dye mutagenicity using the Ames/Salmonella microsome test.

Twenty-five laser dyes and four analogs were tested for mutagenicity in the Ames/Salmonella test. Seven dyes and two analogs gave positive mutagenic responses with bacterial strains TA1538 and TA98. Of two widely used families of laser dyes (coumarins and rhodamines), four coumarin samples, but none of the rhodamine samples, were mutagenic. All mutagenic compounds require enzyme activation for positive response except two terphenyl analogs, which are mutagenic with or without activation. Using high-performance liquid chromatography (HPLC), it was determined that five mutagenic dye samples had multiple components. The dyes themselves may not be the mutagenic agents in all cases (as with Nile Blue) but may contain impurities that are mutagenic. One dye, adicyanomethylene (DCM) (greater than or equal to 95% pure), was mutagenic at doses below 0.5 micrograms/plate on strains TA1538 and TA98. DCM also induced reversions in strains TA96, TA97, TA100, TA102, and TA104, although less efficiently. This study indicates the need for further toxicological testing of these types of compounds. The mutagenic components of these dye mixtures, whether it is the dye or a contaminant, presents a possible hazard to those handling them. Therefore, practices and procedures for the safe handling of specific dyes should be reviewed in light of these findings.

Coloring Agents↗

Occurrence of polychlorinated terphenyls (PCTs) in indoor particulate matter.

In the course of a routine investigation concerned with polychlorinated biphenyl (PCB) contamination of dust collected in classrooms of a junior high school, a group of electron capture detector (ECD)-sensitive compounds with high boiling points were found in addition to PCBs. Using gas chromatographic-mass spectrometric techniques, these compounds were identified as polychlorinated terphenyls (PCTs). Additional measurements indicated that the PCTs were present only in particulate matter collected from the tops of fluorescent light frames but not in air samples obtained concomitantly in the classrooms. Attempts to identify the PCT emission source were unsuccessful. A survey of the literature revealed that PCTs are ubiquitously distributed environmental contaminants, although no data on their indoor occurrence have been reported to date. In view of the toxic effects of PCTs, which seem to be as important as those of PCBs, further attention should be given to the possible presence of PCTs in indoor environments.

Air Pollutants↗

Vialinin A, a novel 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenger from an edible mushroom in China.

While screening for bioactive compounds from edible mushrooms, a new potent antioxidant, vialinin A (1), together with a known compound, ganbajunin B (2), and a mixture of ganbajunins D (3) and E (4), were isolated from the dry fruiting bodies of Thelephora vialis. The structure of 1, 5',6'-bis(phenylacetoxy)-1,1':4',1''-terphenyl-2',3',4,4''-tetraol, was elucidated by spectroscopic and chemical methods. This compound had strong 2,2-diphenyl-1-picrylhydrazyl (DPPH) free radical-scavenging activity with an EC(50) value of 14.0 microM, nearly equal to that of butylated hydroxytoluene (BHT; EC(50) = 10.0 microM). A radical scavenging experiment using 1 and DPPH radicals indicated that 1 donated two hydrogen atoms to two molecules of the DPPH radical under hydrophobic conditions.

Agaricales↗

Polychlorinated terphenyls (PCTs) use, levels and biological effects.

Polychlorinated terphenyls (PCTs) have almost identical characteristics to high chlorinated PCBs: extremely stable, bioaccumulable and biomagnification through food webs might take place. PCT is especially used in investment casting waxes and as a substitute for PCB. In spite of the limited use until now, PCT has been detected in a great variety of environmental samples such as soil, water, shellfish, fish, seals, birds and terrestrial animals. Furthermore, it has been found in paper products and foodstuffs. PCT residues in human tissues--blood, liver, fat and milk--have been detected in some countries. Animal experiments have shown that long-term toxic effects of PCT are of most importance. PCT has a marked inductive effect on the microsomal enzymes in the liver in vertebrates and may cause liver-damage--including tumours. Disturbance of the hormonal--and immunological--systems have also been reported. The most important ecological hazard of PCT--as well as PCB--is the possible disturbance of the reproduction system of the organisms. Many countries do not regulate the use of PCT. In some countries the use of PCT is regulated to closed systems, but the expansion of usage is under consideration in the EEC.

Adipose Tissue↗

General approach to the fractionation and class determination of complex mixtures of chlorinated aromatic compounds.

Among the "inadvertent" environmental pollutants are polychlorinated biphenyls, terphenyls, quadphenyls, naphthalenes, diphenyl ethers, dibenzofurans, dibenzo-p-dioxins and benzenes. Mixtures of these classes of compounds also occur in commercial products such as transformer fluids. To analyze such mixtures, gas chromatography--mass spectrometry may be combined with pre-fractionation on basic and acidic alumina columns and semi-quantitative perchlorination techniques. These procedures are illustrated for synthetic mixtures as well as for two samples of stored transformer fluid. Although the described procedure is mainly intended to be applied to the characterization of the major class components of such mixtures, it is also applicable to the determination of trace components such as the dibenzofurans in commercial polychlorinated biphenyls. The mass spectral techniques permit the simultaneous patterning, or "fingerprinting", of the compounds comprising each major class of chlorinated aromatics present.

Environmental Pollutants↗

Thelephantins I-N; p-terphenyl derivatives from the inedible mushroom Hydnellum caeruleum.

Phytochemical investigation of the methanolic extract of the fruiting bodies of the inedible mushroom Hydnellum caeruleum resulted in the isolation of six p-terphenyl derivatives named thelephantins I-N (1-6), together with a known compound, dihydroaurantiacin dibenzoate (7). These structures were determined by high-resolution MS, 2D NMR, IR and UV spectroscopic analysis, and by the chemical reactions.

Basidiomycota↗