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[Results of radiotherapy of lung cancer in women].

Radiation therapy was provided to 38 (11.5%) of 331 lung cancer female patients at the N. N. Petrov Research Institute of Oncology, USSR Ministry of Health. The combination of radiation- and chemotherapy was used in 9 patients. The Rokus, Rad gamma-therapeutic units or a linear accelerator were used for radiation therapy. Daily single focal doses were 1.2-2.0 Gy, the summary dose was 40-60 Gy. Two-five irradiation fields with the choice of optimum conditions on a computer using the linear programming method were used. The lymph outflow tracts were irradiated from isolated fields and in central lung cancer the tumor and mediastinal region (the root, bifurcation and paratracheal lymph nodes on the affected side) were incorporated in the irradiated zone. Five women received split course irradiation. An analysis of the long-term results of conservative therapy of lung cancer in women has shown that radiation therapy or its combination with chemotherapy is the most effective. These results were slightly better than those in men.

Adenocarcinoma

A patient mix model for hospital financial planning.

A linear programming model was formulated to examine the impact on hospital finances and resource use of changes in patient mix under current and proposed government reimbursement regulations. The model specifically incorporated the costs, revenues, and resource consumption patterns associated with patients drawn from different intensity level and payer class combinations. The necessary data were obtained from financial reports and other records, and the model was used in policy analysis at a major university teaching hospital.

Costs and Cost Analysis

[Calculation of the minimal substrate expenditures for energy metabolism in microorganisms].

The paper presents a method for calculating the minimal expenses of substrates from the medium necessary to compensate energy donor disbalances in an intracellular process under study (for instance, in the production of a unit biomass or in the synthesis of one mole of monomer) between the number of regeneration events and the number of events in which each energy donor is utilized. The method employs the performance tables of energetic processes and is based on linear programming method. The paper includes the performance tables RE, RU and RS describing the stoichiometry of energetic processes in Escherichia coli, and the results of calculation for the cases of E. coli growth on glucose and acetate as sources of carbon.

Acetyl Coenzyme A

Use of a spreadsheet program for Deming's linear regression analysis.

A spreadsheet program for Deming's linear regression analysis suitable for use with popular software packages such as Lotus 1-2-3 or Quattro is described. The program is controlled by an autoexecuting simple menu of operations allowing use by those with only limited experience of spreadsheet operation. Regression coefficients, identification of suspect outlying data values and confidence limits and graphical displays of fitted regression lines are provided.

Confidence Intervals

A BASIC program for deriving linear regression formulas for intraocular lens power prediction.

We present an original BASIC program written specifically for the ophthalmologist that allows calculation of linear regression formulas for prediction of emmetropic lens power from the surgeon's own data. The program features ongoing data storage, options for analyzing specific ranges (such as longer axial lengths), and calculation of residuals. The program is user-friendly and may be used with minimal computer knowledge. The authors will copy the program at no charge on a user's initialized diskette.

Computers

A general purpose non-linear curve fitting program for the British Broadcasting Corporation Microcomputer.

Software for non-linear curve fitting has been written in BASIC to execute on the British Broadcasting Corporation Microcomputer. The program uses the direct search algorithm Pattern-search, a robust algorithm that has the additional advantage of needing specification of the function without inclusion of the partial derivatives. Although less efficient than gradient methods, the program can be readily configured to solve low-dimensional optimization problems that are normally encountered in life sciences. In writing the software, emphasis has been placed upon the 'user interface' and making the most efficient use of the facilities provided by the minimal configuration of this system.

Algorithms

ISMOD: an all-subsets regression program for generalized linear models. I. Statistical and computational background.

This paper describes a system written to carry out regression analyses under certain generalized linear models that are widely used in biomedical research. These include continuous response models such as the Weibull, log-logistic, log-normal and Cox proportional hazards models used in survival analysis, and also discrete Poisson, binomial and multinomial response regression models. The system fits models, generates residuals and other diagnostic output, and has an all-subsets regression feature. This paper describes the models implemented and gives statistical background; Part II describes the ISMOD system and presents examples of its application.

Biometry

A computer program suitable for fitting linear models when the dependent variable is dichotomous, polichotomous or censored survival and non-linear models when the dependent variable is quantitative.

Given a set of measurements of s explanatory variables corresponding to each experimental unit, a computer program, whose methodological background can be found in [2] has been written in FORTRAN IV language in order to perform regression analyses when the dependent variable is: (i) dichotomous; (ii) polichotomous; (iii) censored survival. In the two former the Cox's [6] linear logistic models are used while in the third one it has been resorted to the models suggested by Feigl and Zelen [8]. The statistical estimation procedure is maximum likelihood and among the different algorithms developed to reach this goal, the one published by Van der Voort and Dorpema [3], has been utilized. Furthermore, when the dependent variable is quantitative, the program is suitable to fit any function non-linear in the parameters; the pertinent function and its first and second derivatives must be provided by the user. In the present version, implemented on a Univac 1106 machine, the program fits directly the Gompertz function.

Computers

Non-linear curve-fitting programs for Phadezyme IgE PRIST using a Hewlett-Packard HP-97 and a Texas Instruments TI-59 with a PC-100A printer.

A non-linear curve-fitting program using a modified Hoerl's function on the Hewlett-Packard HP-97 and Texas Instruments TI-59 programmable calculators for the determination of Phadezaym IgE PRIST (IgE) results is described. Excellent correlation between the reference serum concentration and the curve fit concentration results were obtained. The equation used in the curve fit is ln y = A + B ln x + CxD, where A, B, C and an accuracy of fit term R are calculated by the program. The value of D must be specified by the user before the curve fit is performed.

Computers

A mechanistic and kinetic analysis of the interactions of the diastereoisomers of adenosine 3',5'-(cyclic)phosphorothioate with purified cyclic AMP-dependent protein kinase.

The binding affinities of the diastereoisomers of adenosine 3',5'-(cyclic)phosphorothioate, Sp-cAMP[S] and Rp-cAMP[S], for the cyclic AMP- (cAMP-)binding sites on purified and reconstituted pig heart type II cAMP-dependent protein kinase holoenzyme were determined by measuring the ability of these compounds to displace [3H]cAMP from this enzyme. Sp-cAMP[S], a cAMP agonist, displaced 50% of the [3H]cAMP bound to the holoenzyme at a concentration 10-fold higher than that of cAMP; Rp-cAMP[S], a cAMP antagonist, required a 100-fold higher concentration relative to cAMP. Activation of the isolated holoenzyme, determined as phosphotransferase activity, was measured in the presence of the agonist and in the absence and in the presence of increasing concentrations of the antagonist. The results of fitting the activation data to sigmoid curves with a non-linear-regression program and to Hill plots by using a linear-regression program showed that Rp-cAMP[S] had no effect on Vmax, increased the EC50 values for agonist activation and had no effect on the co-operativity of activation (h). A Ki value of 11 microM was determined for Rp-cAMP[S] inhibition of cAMP-induced activation of purified type II cAMP-dependent protein kinase. Electrophoresis of the holoenzyme on polyacrylamide gels under non-denaturing conditions in the presence of saturating concentrations of the diastereoisomers resulted in 100% dissociation of the subunits with Sp-cAMP[S] and 0% dissociation with Rp-cAMP[S]. Sp-cAMP[S], the isomer with an axial exocyclic sulphur atom, binds to the holoenzyme, releases the catalytic subunit and activates the phosphotransferase activity. Rp-cAMP[S], the isomer with an equatorial exocyclic sulphur atom, binds to the holoenzyme but does not result in dissociation, and thus acts as a competitive inhibitor of phosphotransferase activity.

Animals

BANDSCAN--a computer program for on-line linear scanning of human banded chromosomes.

BANDSCAN, an interactive program for on-line linear scanning of human G-banded chromosomes quantitative analysis is described. This program was written for a Wang 720 C programmable desk calculator associated to the Zeiss scanning photometer MP01. The system can detect up to a maximum of 24 densitometric band peaks found along banded chromosome arms or chromatids, estimate the total arm length and localize bands in terms of their relative positions. The scanning stage under control is always returned to the pre-fixed scanning starting point (centromere) which allows a user to scan the specimen repeatedly at different sensitivities and thus to reject minor bands or suspected chromosome artifacts. This facilitates a better visualization of major bands and chromosome landmarks. A fully formated print-out on band localizations and their relative positions is obtained at the end of each scanning. The possibilities of the application of this program to band mapping of human chromosomes and to the study of small chromosome band aberrations is discussed.

Animals

Multifit: a flexible non-linear least squares regression program in BASIC.

MULTIFIT, a program in BASIC for implementation on microcomputers, has been developed for non-linear least squares regression fitting of enzyme kinetic, pharmacokinetic and other data to specific models. The program contains a simple procedure for insertion of model equations with up to five parameters (to be fitted) up to 3 independent variables and 1 dependent variable, and can be used to generate a family of programs with pre-set model functions.

Computers

Program to estimate parameters of linear systems without numerical differentiation.

This paper describes a computer program for estimating the parameters of a linear differential equation systen with constant coefficients by use of a nonlinear least-squares method. For minimization the sum of squares of an existing standard program, the Gauss-Newton gradient procedure, is employed. The differential equation system is solved by the Taylor expansion method. The advantage of this approach is that the derivatives with respect to the parameters are available without numerical differentiation. Therefore the inaccuracy inherent in numerical differentiation and the problem of choosing the modification of the parameters are eliminated. The given procedure is applicable for all the first order gradient methods. The presented method was tested with generated data from a four-compartmental model.

Computers