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L-glutamine alteration of gene expression, not of polyphosphate and calcium metabolism, is a key event in arresting fungal sporulation.

Vegetatively growing cells of the coenocytic freshwater mould Achlya developed asexual sporangia and sporulated within 6 h of postransfer to a nutrient-free (starvation) medium. Sporangial development was arrested by the addition of L-glutamine to starving cells. During starvation (minus glutamine), three polyphosphate substances accumulated intracellularly, ATP was rapidly depleted, and a protein of molecular weight 42 000 (presumed to be actin) was actively synthesized, whereas synthesis of the most abundant detergent-soluble protein of molecular weight 83 000 (p83) ceased. In the presence of glutamine, starving cells used up the polyphosphates faster than they were formed. ATP depletion was delayed, cell calcium (Ca) exited rapidly, and synthesis of actin diminished while p83 synthesis continued unabated. Several pyrimidine analogues, including 5-diazouracil (which inhibited pyridimide nucleotide biosynthesis), and inorganic phosphate prevented Ca exit from glutamine-supplemented starving cells. The pyrimidine analogues delayed but did not inhibit sporangial development; however, they did not overcome glutamine suppression of sporangial development. Vegetatively growing and starving cells displayed significantly different protein synthesis patterns (monitored by polyacrylamide gel electrophoresis) but, when glutamine was added, it changed the protein synthesis pattern of starving cells to a form typical of vegetatively growing cells. Glutamine withdrawal reversed the effect and the cells differentiated. Pyrimidine analogues and inorganic phosphate did not alter the protein synthesis patterns of starving cells in the presence and absence of glutamine. The conclusion is that glutamine inhibition of sporangial development may be linked to its ability to subvert starving cell metabolism by making it vegetative like.

Calcium↗

Evaluation of bacteria isolated from rice for plant growth promotion and biological control of seedling disease of rice.

Of 102 rhizoplane and endophytic bacteria isolated from rice roots and stems in California, 37% significantly (P < or = 0.05) inhibited the growth in vitro of two pathogens, Achlya klebsiana and Pythium spinosum, causing seedling disease of rice. Four endophytic strains were highly effective against seedling disease in growth pouch assays, and these were identified as Pseudomonas fluorescens (S3), Pseudomonas tolaasii (S20), Pseudomonas veronii (S21), and Sphingomonas trueperi (S12) by sequencing of amplified 16S rRNA genes. Strains S12, S20, and S21 contained the nitrogen fixation gene, nifD, but only S12 was able to reduce acetylene in pure culture. The four strains significantly enhanced plant growth in the absence of pathogens, as evidenced by increases in plant height and dry weight of inoculated rice seedlings relative to noninoculated rice. Three bacterial strains (S3, S20, and S21) were evaluated in pot bioassays and reduced disease incidence by 50%-73%. Strain S3 was as effective at suppressing disease at the lowest inoculum density (106 CFU/mL) as at higher density (10(8) CFU/mL or undiluted suspension). This study indicates that selected endophytic bacterial strains have potential for control of seedling disease of rice and for plant growth promotion.

Algal Proteins↗

Preparation of coenocytes for freeze-etching.

Successful freeze-etching of a coenocyte has been accomplished with glutaraldehyde stabilization followed by infiltration with cryoprotectant. Hyphae of the coenocytic water mold Achlya were stabilized with 5% glutaraldehyde in phosphate buffer. Gradual infiltration by dropwise addition of the cryoprotectant (25% glycerol, 10% ethylene glycol, distilled water, v/v) is accomplished over a period of 8-10 hr on a shaker. Subsequent freeze-etching is carried out by standard procedures.

Cell Membrane↗

Molecular identification of the turf grass rapid blight pathogen.

Rapid blight is a newly described disease on turf grasses, primarily found on golf courses using suboptimal water for irrigation purposes. On the basis of shared morphological characteristics, it has been proposed that the rapid blight pathogen belongs to a genus of stramenopiles, Labyrinthula, which had been known to cause disease of marine plants only. We have collected 10 isolates from four species of turf grass in five states and sequenced portions of the SSU (18S) rDNA gene from each to provide a definitive taxonomic placement for rapid blight pathogens. We also included sequences from Labyrinthuloides yorkensis, Schizochytrium aggregatum, Aplanochytrium sp., Thraustochytrium striatum, Achlya bisexualis and several nonturf-grass isolates of Labyrinthula. We found that rapid blight isolates indeed are placed firmly within the genus Labyrinthula and that they lack detectable genetic diversity in the 18S rDNA region. We propose that the rapid blight pathogens share a recent common ancestor and might have originated from a single, infected population.

Genes, rRNA↗

Synthesis of some N1-phenyl-N3-[2-aryl/aryloxymethyl-1,3,4-oxa(thia)diazol-2-yl]sulphonyl ureas as potential pesticides.

N1-Phenyl-N3-aryl/aryloxymethyl[1,3,4-oxa(thia)diazol-2-yl]s ulphonyl ureas (4 and 7) were conveniently prepared from 2-aryl/aryloxymethyl- 1,3,4-oxa(thia)diazol-2-sulphonamide (3 and 6) and phenyl isothiocyanate. Sulphonamides were synthesised by the reaction of 2-aryl/aryloxymethyl-1,3,4-oxa(thia)diazol-2-sulphonyl chlorides (2 and 5) with ammonia. All the compounds have been tested for fungicidal activity against the fungal species Cephalosporium saccharii and Helminthosporium oryzae. The two species of the aquatic fungi viz. Saprolegnia parasitica and Achlya orion responsible for fish mycoses were tested and also found remarkably active. All the compounds were also tested for herbicidal activity against Digiteria ciliaris, Oryza sativa and Raphunus sativa.

Fungi↗

Haematological investigations on fishes infested with fungal growth.

Considerable changes have been observed in the haematological parameters of Labeo rohita, Mystus cavasius, Nandus nandus and Puntius sarana infested with Aphanomyces sp., Saprolegnia parasitica, Achlya prolifera and Dictyuchus monosporus, respectively. Substantial decline have been observed in the number of erythrocytes and lymphocytes. The number of granulocytes and monocytes were noticed significantly increased. The amount of haemoglobin has also been decreased drastically in all the cases.

Animals↗

[Water fungi occurence in the water reservoir in Zarzeczany of Podlasie province].

Studies on the occurrence of aquatic microorganisms in the newest water reservoir Zarzeczany village were carried out in years 2001-2004. Hydro chemical analysis was performed using standard methods. Bait method was used to isolate the fungi. In the reservoir 52 fungi species were identified: fish pathogenic Achlya debaryana, A. polyandra, Aphanomyces laevis, Dictyuchus monosporus, D. sterile, Saprolegnia ferax, S. monoica, S. parasitica, human pathogenic Candida albicans, C. tropicalis and Trichosporon cutaneum, decomposing keratin Blastocladiopsis parva, Catenaria anguillulae, C. verrucosa, Catenophlyctis variabilis, Lagenidium humanum, Rhizophydium keratinophilum, and decomposing chitin Aphanomyces astaci, Karlingia chitinophila, Rhizidium chitinophilum, Asterophlyctis irregularis and Blastocladiella brytanica.

Animals↗

Cloning and analysis of beta-tubulin gene from a protoctist.

We have isolated and characterized by restriction endonuclease mapping, transcription pattern, and DNA sequencing a beta-tubulin gene from the coenocytic freshwater protoctist, Achlya klebsiana. The gene is intronless and has a single open reading frame that encodes a 444-amino acid residue polypeptide of Mr 49,856. The protein shows a high degree of homology to other beta-tubulins, 85% identity to human beta-tubulin and 89% identity to beta-tubulin of the sporozoan (also a protoctist) Plasmodium falciparum. Fungal beta-tubulins are among the least identical to A. klebsiana beta-tubulin. Through Southern blot hybridization analysis, we determined that there is just one form of beta-tubulin gene in A. klebsiana. Transcription of the gene was studied during sporogenesis. Following induction of sporogenesis, the level of the mRNA increased markedly at 2 h and declined in the next 2 h when mitosis, cytokinesis, and spore development occurred. At the same time, beta-tubulin content increased about 6-fold in the cells. Sporulation in A. klebsiana is not inhibited by antimitotic drugs such as benomyl, colcemid, and colchicine. Benomyl resistance in Neurospora crassa and Aspergillus nidulans has been genetically and molecularly linked to single amino acid substitutions at positions 167 and 165, respectively. The change from phenylalanine to tyrosine conferring benomyl resistance to N. crassa is seen in A. klebsiana, but the valine substitution for alanine in A. nidulans is marked by cysteine replacement in A. klebsiana. The amino acid found at position 165 is not conserved in various beta-tubulins, but phenylalanine at position 167 is extremely conserved.

Amino Acid Sequence↗

Aquatic fungi associated with seven species of Nile fishes (Egypt).

Ten identified species in addition to 2 unidentified species of Achlya and Pythium which belong to seven zoosporic fungal genera (aquatic freshwater fungi) were recovered during this investigation. The fish species with most zoosporic fungi (5 species and 3 genera) was Tilapia nilotica. The fish species with least fungi were Bagrus bayad and Syndontis schall (yielded only one species each). Mormyrus kannum did not give any zoosporic fungal species. Some aquatic fungi emerged only from internal organs of some fish species. 46 species belonging to 22 terrestrial fungal genera were also recovered during this work. The broadest spectrum (15 species) was recorded in the second external wash water (WE2) of Mormyrus kannum and the narrowest spectrum (2 species) in the second internal wash water (WI2) of Schilbe mystus and with the scales of Labeo niloticus. First wash water of internal organs (WI1) of Tilapia nilotica yielded the highest total count (6.95% of total count) and the second wash water of internal organs (WI2) of Schilbe mystus yielded the lowest total count (0.34% of total count). Nile water sample (NW) yielded 3.67% of total fungi and eight species which belong to seven genera. Aspergillus was the most common (31 out of 31 samples) and yielded 52.40% of total fungi. It was represented by 12 species and one variety of A. flavus var. columnaris (broadest spectrum). Penicillium was represented by 7 species and found in 19 out of 31 samples yielding 11.02% of total fungi.

Animals↗

Synthesis of some pyrazoline and isoxazolin derivatives as possible fungicides.

1-Acetyl/aroyl-3-methyl-4-substituted anilido-5-aryl pyrazolines and 3-methyl-4-substituted anilido-5-aryl isoxazolines were conveniently prepared from synthon, 4-aryl-3-substituted anilido but-3-en-2-ones in presence of hydrazine hydrate/hydrazides and hydroxylamine hydrochloride respectively. All the compounds have been assayed against Cephalosporium sacchari and Helminthosporium oryzae and found remarkably active. Two species of aquatic fungi viz. Saprolegnia parasitica and Achlya orion responsible for fish mycoses were tested and also found remarkably active.

Antifungal Agents↗

Immunofluorescence colocalization of the 90-kDa heat-shock protein and microtubules in interphase and mitotic mammalian cells.

A mouse monoclonal antibody (AC88) that was raised against the 88-kDa heat-shock protein of the water mold, Achlya ambisexualis, and that cross-reacts with the 90-kDa mammalian heat-shock protein (hsp90), and an antibody against tubulin were used to localize hsp90 and microtubules, respectively, in the same cultured rat endothelial and PtK1 epithelial cells by indirect immunofluorescence. AC88 and tubulin antibodies labeled the same structures in cells at all stages of the cell cycle, regardless of whether cells were permeabilized before or after fixation. Labeling of cell structures by both AC88 and anti-tubulin antibodies was identically affected by treating cells with colcemid. Double labeling with AC88 and anti-tubulin antibodies in interphase and mitotic cells is consistent with the conclusion that all microtubules are labeled and that no subclass of microtubules is preferentially labeled. Fluorescent labeling by AC88 was prevented by preabsorption of the antibody with purified rat hsp90 but was unaffected by preabsorption with purified 6S tubulin dimer. In contrast to AC88, fluorescent labeling by an anti-tubulin antibody was prevented by preabsorption with tubulin dimer but was unaffected by preabsorption with rat hsp90. Western-blot analysis demonstrated no cross-reactivity of AC88 for tubulin and no cross-reactivity of the anti-tubulin antibody for hsp90. A polyclonal antiserum fraction from a rabbit immunized with the 89-kDa heat-shock protein from chicken also labeled the mitotic apparatus in dividing cells and, somewhat less distinctly, fibrous structures in interphase cells. Labeling by hsp89 anti-serum was prevented by absorption with hsp90. AC88 also labeled microtubules in cultured mouse (L929 and 3T3), rat (endothelium and TRST), hamster (CHO) and primate (BSC, COS-1 and HeLa) cell lines. The demonstration of colocalization of hsp90 with microtubules should provide a valuable clue to eventual understanding of the cellular function of this ubiquitous, conserved and abundant stress-response protein.

Animals↗

Structure and expression of fungal calmodulin gene.

I report on the isolation, structural analysis, and in vivo expression patterns of a fungal calmodulin gene. The gene is intronless and encodes a protein of 148 amino acid residues that is 92% homologous with vertebrate calmodulins. Through S1 nuclease transcript mapping, it was determined that the cloned gene (a) is transcribed in vivo, (b) has a 5'-untranslated region of about 400 nucleotides, and (c) has a 3'-untranslated end of about 300 nucleotides. Southern blot hybridization analysis of the genomic DNA and the cloned gene provide evidence for the existence of only one type of calmodulin gene in the organism. The amino acid sequence deduced from the DNA sequence shows that Achlya klebsiana calmodulin has amino acid substitutions that are a mix of those seen in calmodulins from invertebrates such as Drosophila and trypanosome when compared to mammalian calmodulins. Not surprisingly, it has less resemblance to calmodulins from Saccharomyces and Dictyostelium.

Amino Acid Sequence↗

Electrobiology of fungal hyphae.

Hyphae of many fungi drive electric currents through themselves. In Achlya bisexualis the current is carried by protons which enter the apical region by symport with amino acids and are expelled distally. The proton current may play a role in the spatial localization of apical growth.

Electric Conductivity↗

Studies of aquatic fungi. XI. Mycoflora of the upper course of the River Szeszupa.

Hydrochemical analysis and the occurrence of aquatic fungi at the 3 stands in the upper course of the river Szeszupa were the aim of the studies of the authors. Out of 22 species of fungi found the following appeared to be new for Poland's hydromycoflora: Olpidium rotiferum, Nephrochytrium buttermerense and Achlya orion.

Fresh Water↗

NADP(+)-activable, NAD(+)-specific glutamate dehydrogenase. Purification and immunological analysis.

An NAD(+)-specific glutamate dehydrogenase (NAD-GDH) that is inducible by L-glutamine was isolated from Achlya klebsiana and purified to electrophoretic homogeneity. The enzyme is only partially active in vitro unless NADP+ (an activator) is present in both its oxidative deamination and reductive amination reactions. This type of enzyme was reported (LéJohn, H.B. (1971) Nature 231, 164-168) to be widespread among the amorphous group of algae-related fungi classified as Oomycota. The enzyme retained its dependence on NADP+ at all stages of its purification. NADP+ decreased the Km of substrates 3-fold and increased the Vmax 4-fold. M(r) of the undernatured enzyme was 480,000, and, denatured, only a single subunit of M(r) 120,000 was seen. A polyclonal antibody raised in rabbit against purified enzyme subunit excised from SDS-polyacrylamide gel electrophoresis gels immunoprecipitated the M(r) 120,000 polypeptide, the undenatured enzyme, and a physically distinct polypeptide of M(r) 74,000. The antibody, purified against the M(r) 120,000 enzyme subunit as anchored antigen on Sepharose, still immunoprecipitated the M(r) 74,000 polypeptide. The M(r) 74,000 polypeptide was found to be a subunit of a M(r) 220,000 native protein.

Base Sequence↗

Cloning and analysis of a constitutive heat shock (cognate) protein 70 gene inducible by L-glutamine.

An intronless gene encoding a protein of 652 amino acid residues with an M(r) of 71,266, showing between 79% and 59% identity in nucleotide sequence with heat shock protein 70 (HSP 70) genes of Bremia lactucae (a parasitic Oomycete of lettuce) and a wide range of organisms that include humans, was isolated from the nonparasitic Oomycete Achlya klebsiana. While the gene appears to be constitutively expressed, L-glutamine augmented its expression particularly under conditions of nutritional stress. L-Glutamine enhanced the transcription of a 2.4-kilobase poly(A)+ RNA simultaneously in the same way as it elevated the cellular level of the HSP 70-like protein. A polyclonal antibody (affinity-purified) raised in rabbit against the purified monomeric (M(r) 120,000) form of an NAD-specific glutamate dehydrogenase (Yang, B., and LéJohn, H.B. (1994) J. Biol. Chem. 269, 4506-4512) immunoprecipitated the HSP 70-like protein, and it was used to study the kinetics of induction of this stress-related protein and the effect of proteinase inhibitors on its metabolism. By using as probes four partial length cDNA clones, nine overlapping DNA fragments of the organism's genome carrying the HSP 70-like protein gene were isolated from a genomic library. The nucleotide sequence of the gene, including its boundaries, was determined by using these genomic clones. The 5'-untranslated boundary of the gene displayed the classical nucleotide arrangement of heat shock elements as well as CCAAT and TATA box motifs. Within the coding region are the typical conserved amino acid heat shock protein signatures 1 and 2 at the predicted locations. By primer extension and S1 nuclease protection mapping system, we estimated that the gene is probably transcribed into a message of 2.2 kilobases.

Amino Acid Sequence↗

Molecular characterization of an NAD-specific glutamate dehydrogenase gene inducible by L-glutamine. Antisense gene pair arrangement with L-glutamine-inducible heat shock 70-like protein gene.

The gene for an NAD-specific glutamate dehydrogenase (NAD-GDH) that is allosterically activated by NADP+ (non-substrate) was cloned, and its physical structure and nucleotide sequence was determined. The gene consists of 9 introns and 10 exons; the 10th and largest exon, which is 1863 nucleotides long, is at the 3'-end of the gene. The shortest exon of 33 base pairs is the first and is located at the 5'-end of the gene. The large exon is in perfect register along the complementary strand with a heat shock 70 (HSP)-like protein gene. The NAD-GDH gene is inducible with L-glutamine, just as the HSP 70-like protein gene (LéJohn, H.B., Cameron, L.E., Yang, B., MacBeath, G., Barker, D.S., and Williams, S.A. (1994) J. Biol. Chem. 269, 4513-4522). The phenomenon of anti-parallel coupling of two genes is named antisense gene pair. By Northern and Western blotting techniques, we obtained indirect evidence that the gene is expressed in vivo. The gene encodes a protein of M(r) 118,740 which consists of 1063 amino acid residues. The 5' and 3' borders of the gene display typical but unproven promoter motifs of CCAAT, TATAAT, and AAATAAAA polyadenylation signal bounded by a pyrimidine-rich transcription termination-type format. Restriction endonuclease site mapping of all the genomic clones isolated that carry most or all of the gene, and of the genome itself, gave hybridization patterns that are consistent with the interpretation that the organism, Achlya klebsiana, has only one form of the gene. 3'-End-labeling of a 5.2-kb XbaI DNA fragment (carrying the antisense gene pair) that was then asymmetrically cleaved to produce two single 3'-end-labeled pieces that were used as probes on L-glutamine-induced cell poly(A)+ RNA, showed that the end-labeled DNA equivalent to the HSP 70-like protein mRNA hybridized to a 3.4-kb transcript and the end-labeled DNA equivalent to the NAD-GDH mRNA hybridized to a 2.4-kb transcript.

Amino Acid Sequence↗

The interactive effect of some molluscicides on the inermediate host of human bilharziasis and their associated zoosporic fungi in the river Nile, Egypt.

Biomphalaria alexandrina and Bulinus truncatus are the main vectors of human Bilharziasis in Egypt. The mycotic inhabitants of both control and treated snails were surveyed at 7 and 15 days intervals. The two molluscicides affected more on the mortality of Biomphalaria alexandrina than Bulinus truncatus. The highest population of zoosporic fungi was collected from Biomphalaria alexandrina, the lowest from Bulinus truncatus. Copper sulphate was more effective than Bayluscide on the fungal species of both snails. Achlya, Dictyuchus and Saprolegnia were the common genera while Leptolegnia caudata and Pythium ultimum completely missed from treated snails. The total colonies of zoosporic fungi were lowered after. 15 days of treatment. The two molluscicides inhibited the cell division of both tested snails.

Animals↗