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PubMed1990

Diagnosis of astrovirus gastroenteritis by antigen detection with monoclonal antibodies.

An enzyme-linked immunosorbent assay (ELISA), based on monoclonal antibodies to the astrovirus group antigen, was designed for the detection of astroviruses in stools of patients with gastroenteritis. Compared to immune electron microscopy used as the standard test, the sensitivity of the astrovirus ELISA was 91% (31/34) and the specificity was 96% (54/56). All five of the known astrovirus serotypes could be detected in 16 samples on which serotyping was done. In tests on 155 stools containing other enteric viruses, including adenoviruses, rotaviruses, caliciviruses, Hawaii virus, Snow Mountain virus, and Norwalk virus (30, 20, 70, 24, 4, and 7 samples, respectively), only 3 were positive in the astrovirus ELISA. The combined specificity for all astrovirus immune electron microscopy-negative samples was 98% (206/211). The results demonstrate that the new ELISA provides a sensitive and specific means for the diagnosis of astrovirus gastroenteritis.

Antibodies, Monoclonal↗
PubMedDate not supplied

Chromosome number of Severtzov's sheep (Ovis ammon severtzovi): G-banded karyotype comparisons within ovis.

Severtzov's sheep (Ovis ammon severtzovi; Nasonov 1914) has a 2n = 56 diploid chromosome number and a karyotype consisting of two pairs of biarmed and 25 pairs of acrocentric autosomes, a large acrocentric X, and a minute biarmed Y. The G-banding patterns of the largest pair of biarmed chromosomes were identical to those of the largest biarmed chromosomes in all wild and domestic sheep of the genus Ovis. The banding patterns of the second pair of biarmed chromosomes were identical to the third pair of biarmed chromosomes in all sheep of the genus Ovis with 2n = 54 and to the third largest pair of chromosomes in the 2n = 52 karyotype of the Siberian snow sheep (O. nivicola). The G-banded karyotype of Severtzov's sheep is consistent with all subspecies of argali (O. ammon spp.) that have been karyotyped. Numerical ascription of acrocentric chromosome equivalents based upon the fundamental karyotype of Ovis that gave rise to the biarmed chromosomes of severtzovi are 1 and 3, and 5 and 11 for the largest and second largest biarmed chromosomes, respectively. Based upon diploid chromosome number and G bands, Severtzov's sheep should be considered a subspecies of argali and not a urial.

Animals↗
PubMedDate not supplied

Kinship analysis of Pacific salmon: insights into mating, homing, and timing of reproduction.

Multilocus microsatellite genotypes were used to infer kinship and relatedness in two species of Pacific salmon from three populations in Washington State. Even in the absence of direct genetic data from parents, clustering of individuals according to allele sharing and reconstruction of parental genotypes allowed resolution of full- and half-sib relationships among 135 chinook salmon (Oncorhynchus tshawytscha) sampled as preemergent juveniles from 14 redds in the Dungeness River. Inferred reproductive behaviors included single-pair matings, polyandry in which females mated with two to three males at a single redd, polygyny in which males mated with two females at different redds, use of two redds by a single female, and use of one redd site by two females. Greater average relatedness (rxy) in the upper reach of the Dungeness River implied within-reach homing of returning adults. In steelhead trout (O. mykiss), the frequency of related pairs (dyads) of mature individuals that migrated up Snow Creek less than a week apart was greater than expected for randomly chosen dyads, as was the frequency of steelhead dyads that were spawned on the same day in the Forks Creek hatchery. These results imply a heritable basis for upstream migration date and maturation date in steelhead trout.

Animals↗
PubMed1992

Nectar sources and age structure in a population of Aedes provocans (Diptera: Culicidae).

Gonotrophic-age structure of a population of Aedes provocans (Walker) and nectar sources used by adults were studied for 2 yr at a field site near Belleville, Ontario, Canada. Females emerged during a short period, and aging of the population was highly synchronous. Complete parity of the population was achieved within about 17 d in 1978 and 27 d in 1979. Some females completed as many as four gonotrophic cycles. This synchronous pattern of population aging is compared with patterns in other species of snow-melt Aedes, which typically age much more gradually. The pattern of synchronous aging permitted estimation of daily mortality rates from an index of population size derived from human-bait catches; peaks in the biting index were related to each gonotrophic cycle in the population. Nectar sources for adults were ranked according to abundance and the extent to which they were used by Ae. provocans, permitting a coarse, semiquantitative estimate of preferences. Ae. provocans obtained nectar from the extrafloral nectaries of one species and the floral nectaries of 19 species of angiosperms. Shrubs and trees, especially of the Rosaceae (primarily species of Prunus), were particularly important as nectar sources and bloomed concurrently with the appearance of nulliparous females. Sharp declines in the population of Ae. provocans were associated with the cessation of blooming of these plant species. It is hypothesized that the highly synchronous pattern of gonotrophic aging in Ae. provocans was attributable, in part, to the ready availability of nectar sources and bloodmeal hosts near breeding sites.

Aedes↗
PubMed1995

Aedes albopictus (Diptera: Culicidae) eggs: field survivorship during northern Indiana winters.

Aedes albopictus (Skuse) is an Asian mosquito that recently has colonized North America via used tire transport. Temperate Ae. albopictus populations overwinter as diapausing eggs, but tropical populations cannot diapause. Eggs of tropical (SABAH) and temperate (INDY) Ae. albopictus were obtained in diapause-inducing conditions and placed inside a scrap tire to monitor overwintering survival in northern Indiana during the winters of 1989-1990 and 1990-1991. Diapause eggs of Ae. triseriatus (Say), a native North American mosquito, were included for comparison. Tropical Ae. albopictus from Malaysia did not survive either winter. Temperate Ae. albopictus from Indianapolis, IN, did not survive the winter of 1989-1990, but 78% survived the winter of 1990-1991. In contrast, 92 and 96% of Ae. triseriatus survived the winters of 1989-1990 and 1990-1991, respectively. Neither mean temperature nor absolute minimum temperature (a winter's lowest temperature) accurately predicted Ae. albopictus overwintering survivorship in the field. The possible effect of snow and other insulating materials on the overwintering survivorship of Ae. albopictus eggs is discussed.

Adaptation, Physiological↗
PubMed2003

Serum concentrations of lipids, vitamin d metabolites, retinol, retinyl esters, tocopherols and selected carotenoids in twelve captive wild felid species at four zoos.

Serum concentrations of several nutrients were measured in 12 captive wild felid species including caracal (Felis caracal), cheetah (Acinonyx jubatus), cougar (Felis concolor), fishing cat (Felis viverrinus), leopard (Panthera pardus), lion (Panthera leo), ocelot (Felis pardalis), pallas cat (Felis manul), sand cat (Felis margarita), serval (Felis serval), snow leopard (Panthera uncia) and tiger (Panthera tigris). Diet information was collected for these animals from each participating zoo (Brookfield Zoo, Fort Worth Zoo, Lincoln Park Zoological Gardens and North Carolina Zoological Park). The nutritional composition of the diets at each institution met the probable dietary requirements for each species except for the pallas cat. Blood samples were collected from each animal (n = 69) and analyzed for lipids (total cholesterol, triacylglycerides, HDL cholesterol and LDL cholesterol), vitamin D metabolites [25-hydroxycholecalciferol (25(OH)D) and 1,25-dihydroxycholecalciferol (1,25(OH)(2)D)], vitamin A (retinol, retinyl stearate and retinyl palmitate), vitamin E (alpha- and gamma-tocopherol) and selected carotenoids. Species differences were found for all except triacylglycerides and 1,25(OH)(2)D. Genus differences were found for retinol, retinyl palmitate, retinyl stearate, gamma-tocopherol and beta-carotene. Circulating nutrient concentrations for many of the species in this study have not been reported previously and most have not been compared with the animals' dietary intakes. The large number of animals analyzed provides a substantial base for comparing the serum nutrient concentrations of healthy animals, for both wild and captive exotic species.

Animal Nutritional Physiological Phenomena↗
PubMed2005

Characterization of the long-wavelength opsin from Mecoptera and Siphonaptera: does a flea see?

Mecoptera and Siphonaptera represent two insect orders that have largely been overlooked in the study of insect vision. Recent phylogenetic evidence demonstrates that Mecoptera (scorpionflies) is paraphyletic, with the order Siphonaptera (fleas) nesting as sister to the family Boreidae (snow fleas), showing an evolutionary trend towards reduction in gross eye morphology within fleas. We provide the first molecular characterization of long-wavelength opsins from these three lineages (opsin gene from fleas [FL-Opsin], the Boreidae [B-Opsin], and a mecopteran family [M-Opsin]) and assess the effects of loss of visual acuity on the structure and function of the opsin gene. Phylogenetic analysis implies a physiological sensitivity in the red-green spectrum for these opsins. Analysis of intron splice sites reveals a high degree of similarity between FL-Opsin and B-Opsin as well as conserved splice sites across insect blue-green and long-wavelength opsins. Calculated rates of evolution and tests for destabilizing selection indicate that FL-Opsin, B-Opsin, and M-Opsin are evolving at similar rates with no radical selective pressures, implying conservative evolution and functional constraint across all three lineages.

Animals↗
PubMed1998

Epidemiology of Salmonella typhimurium O:4-12 infection in Norway: evidence of transmission from an avian wildlife reservoir.

In 1987, a nationwide outbreak of Salmonella typhimurium O:4-12 infection traced to contaminated chocolate bars occurred in Norway. In the 5 years after the outbreak, elevated numbers of sporadic cases caused by the epidemic strain of Salmonella were detected, followed by a decline in subsequent years. To characterize the epidemiology of this infection, the authors analyzed information concerning all sporadic cases reported in Norway from 1966 to 1996. Of the 153 patients infected by the outbreak strain, 43% were less than 5 years of age, and only three persons had acquired the infection abroad. In contrast, 46% of the cases attributable to other S. typhimurium O:4-12 variants and 90% of the total number of Salmonella infections were related to foreign travel. A distinct seasonality was observed: 76% of the cases appeared between January and April. At the same time of year, the epidemic strain was regularly encountered as the etiologic agent of fatal salmonellosis among wild passerine birds, suggesting an epidemiologic link between the avian and human cases. The strain was rarely isolated from other sources. From 1990 to 1992, the authors conducted a prospective case-control study of sporadic indigenous infections to identify risk factors and obtain guidance for preventive efforts. Forty-one case-patients, each matched by age, sex, and geographic area with two population controls, were enrolled. In conditional logistic regression analysis, the following environmental factors were independently related to an increased risk of infection: drinking untreated water, having direct contact with wild birds or their droppings, and eating snow, sand, or soil. Cases were also more likely than controls to report having antecedent or concurrent medical disorders. Forty-six percent of the study patients were hospitalized for their salmonellosis.

Adolescent↗
PubMed1988

25- to 30-nm virus particle associated with a hospital outbreak of acute gastroenteritis with evidence for airborne transmission.

Between November 1 and 22, 1985, an outbreak of acute, nonbacterial gastroenteritis occurred in a 600-bed hospital in Toronto, Ontario, Canada. Illness in 635 of 2,379 (27%) staff was characterized by fatigue, nausea, diarrhea, and vomiting and had a median duration of 24-48 hours. The finding of virus-like particles measuring 25-30 nm in six stool specimens and low rates of seroresponse to Norwalk virus (3/39) and Snow Mountain agent (1/6) suggest that a Norwalk-like virus was responsible for the outbreak. The outbreak was of abrupt onset and high incidence, affecting 79 people in a single day. No common food or water exposure could be identified. The attack rate was greatest (69%) for staff who had worked in the Emergency Room. Of 100 patients and their companions who visited the Emergency Room on November 11-12 for unrelated problems, 33 (33%) developed gastroenteritis 24-48 hours after their visit, versus 0 of 18 who visited the Emergency Room on November 8 (p less than 0.001). An analysis of housekeepers who worked at least once during the period from November 9-13, which included those who became ill during the period of November 9-14, showed that the risk of becoming ill was four times greater for those who visited or walked through the Emergency Room than for those who did not (p = 0.028). These data are consistent with the possibility of the airborne spread of a virus.

Adult↗
PubMed1992

Seroepidemiology of California and Bunyamwera serogroup bunyavirus infections in humans in California.

Several human populations in California were surveyed cross-sectionally and longitudinally for neutralizing antibodies to selected arthropod-borne bunyaviruses in the California and Bunyamwera serogroups. Overall, the prevalence of antibodies to California serogroup viruses was 6.4% in 702 individuals sampled during 1963-1988. Comparative antibody titers in individual sera indicated that 4.1% and 1.6% of these infections were caused by viruses similar or identical to Jamestown Canyon and California encephalitis, respectively. Evidence of prior infection with the Jamestown Canyon serotype was found in 10% of 118 humans employed outdoors in high elevation areas and sampled in 1988, including 5 of 16 persons (31%) employed as rangers patrolling in remote forests and meadows. This probably reflects increased exposure to bites of boreal mosquitoes that breed in pools of melted snow. Antibodies to Bunyamwera serogroup viruses, including the Northway serotype, which was recently shown to be enzootic in California, were found in only 2 of 702 humans studied. No seroconversions were detected to selected California or Bunyamwera serogroup viruses in paired samples from 392 humans, including 349 patients with acute central nervous system disease or undifferentiated febrile illnesses who were sampled during 1963-1988, and thus these viruses are currently unconfirmed as human pathogens in California.

Adolescent↗
PubMed1998

Characterization of a desiccation-related protein in lily pollen during development and stress.

This work characterizes a lily (Lilium longiflorum Thunb. cv. Snow Queen) anther (LLA) protein associated with desiccation. Peptide mapping analysis revealed that the abundant LLA-23 doublet contained similar polypeptides, having an isoelectric point of 6.1. Immunoblots of pollen protein from developing anther/pollen confirmed that the LLA-23 protein accumulated only at the later stage of pollen maturation and that the levels remained steady in mature and vital pollen. The accumulation of LLA-23 proteins was correlated with desiccation that naturally occurred in pollen. Subcellular fractionation of pollen proteins revealed that the protein was located in the cytoplasmic fraction. Premature drying of developing pollen confirmed that the concomitant accumulation of LLA-23 was associated with desiccation. Peptide sequence analysis demonstrates similarities between the lily LLA-23 and a family of water-deficit/ripening-induced proteins including LP3 of pine, DS2 of potato, and Asr of tomato and pummelo. In addition, the concomitant accumulation of LLA-23 can be experimentally manipulated by methyl jasmonate (Me-JA) and salicylic acid (SA) as well as by mannitol and methyl viologen. The LLA-23 represents a novel member of the water-deficit/ripening-induced proteins.

Acetates↗
PubMed1996

What function for human lithostathine?: structural investigations by three-dimensional structure modeling and high-resolution NMR spectroscopy.

Human lithostathine is a 144-residue protein, expressed in various organs and pathologies. Several biological functions have been proposed for this protein. Among others, inhibition of nucleation and growth of CaCO3 crystals in the pancreas and bacterial aggregation has retained attention, because lithostathine presents high sequence similarities with calcium-dependent (or C-type) lectins. To study its structure-function relationship and compare it with that of C-type lectins, we have built a model for lithostathine. This model is derived from the only two C-type lectins of known structures: rat mannose binding protein and human E-selectin. An original strategy, inspired by that proposed by Havel and Snow, was designed for model building. We have undertaken NMR studies on the natural protein. Although complete structure determination has not yet been achieved, the NMR studies did confirm the main characteristics of the model. From analysis of the proposed model, we concluded that lithostathine is not expected to present sugar- or calcium-binding properties. Therefore, the mechanisms of bacterial aggregation and inhibition of CaCO3 nucleation and growth have not yet been elucidated.

Amino Acid Sequence↗
PubMed2004

A European satellite-derived UV climatology available for impact studies.

This paper presents a satellite-derived climatology of the surface UV radiation, intended to support impact studies on the environment and human health. As of today, the dataset covers the period from 1 January 1984 to 31 August 2003, with daily dose maps covering Europe with a spatial resolution of 0.05 degrees. A comparison between the modelled erythemal daily dose and measurements in Ispra yields an r.m.s. value with a relative difference of 29% and a bias of 3%. The seemingly large dispersion is, however, due to a restricted number of days for which the relative difference is very high. The climatological dataset documents systematic patterns in the geographical distribution of the surface UV radiation due to cloudiness, altitude and snow. It also shows a large year-to-year variability in monthly doses of upto +/-50% in spring and +/-30% in summer.

Algorithms↗
PubMed1997

Branch growth and biomass allocation in Abies amabilis saplings in contrasting light environments.

Aboveground biomass allocation, and height and branch growth were studied in saplings of the shade-tolerant conifer, Abies amabilis Dougl. ex Forbes growing in large openings and in the understory of an old-growth forest in western Oregon. The presence of annual overwintering budscale scars was used to infer extension growth histories; annual growth rings in branches and stems were used in combination with extension histories to compute partitioning of new biomass among leaves, branches and stems. Saplings growing in large gaps had conical crowns, whereas understory saplings had umbrella shaped crowns as a result of much greater rates of branch extension than stem extension. Understory saplings grew slowly in height because of low rates of biomass production and low allocation of biomass to stem extension. About 40% of new biomass was allocated to foliage in both groups, but understory saplings allocated more of the remaining growth increment to branches and less to stem than did saplings growing in large gaps. These results differ from the patterns observed in shade-tolerant saplings of tropical forests, where allocation to foliage increases with shading and branch allocation is much lower than observed here. This difference in allocation may reflect mechanical constraints imposed by snow loads on the evergreen A. amabilis crowns, particularly on flat-crowned understory saplings.

Journal Article↗
PubMed1999

Role of roots in winter water relations of Engelmann spruce saplings.

Roots play a role in maintaining foliar water balance in subalpine conifer saplings during winter. We used deuterium-labeled water to demonstrate that roots of Engelmann spruce (Picea engelmannii Parry) take up water during the late-winter-early spring period. Based on a root severing experiment, we conclude that small, snow-covered saplings were largely dependent on root water uptake to meet winter transpiration needs, whereas larger saplings relied more on water stored in stem sapwood. Both water uptake and water stored in roots appeared to be critical for the survival of saplings exposed above the snowpack during the late-winter-early spring period, when sap reserves were insufficient to meet increasing transpirational demands.

Journal Article↗
PubMed2000

Regional assessment of boreal forest productivity using an ecological process model and remote sensing parameter maps.

An ecological process model (BIOME-BGC) was used to assess boreal forest regional net primary production (NPP) and response to short-term, year-to-year weather fluctuations based on spatially explicit, land cover and biomass maps derived by radar remote sensing, as well as soil, terrain and daily weather information. Simulations were conducted at a 30-m spatial resolution, over a 1205 km(2) portion of the BOREAS Southern Study Area of central Saskatchewan, Canada, over a 3-year period (1994-1996). Simulations of NPP for the study region were spatially and temporally complex, averaging 2.2 (+/- 0.6), 1.8 (+/- 0.5) and 1.7 (+/- 0.5) Mg C ha(-1) year(-1) for 1994, 1995 and 1996, respectively. Spatial variability of NPP was strongly controlled by the amount of aboveground biomass, particularly photosynthetic leaf area, whereas biophysical differences between broadleaf deciduous and evergreen coniferous vegetation were of secondary importance. Simulations of NPP were strongly sensitive to year-to-year variations in seasonal weather patterns, which influenced the timing of spring thaw and deciduous bud-burst. Reductions in annual NPP of approximately 17 and 22% for 1995 and 1996, respectively, were attributed to 3- and 5-week delays in spring thaw relative to 1994. Boreal forest stands with greater proportions of deciduous vegetation were more sensitive to the timing of spring thaw than evergreen coniferous stands. Similar relationships were found by comparing simulated snow depth records with 10-year records of aboveground NPP measurements obtained from biomass harvest plots within the BOREAS region. These results highlight the importance of sub-grid scale land cover complexity in controlling boreal forest regional productivity, the dynamic response of the biome to short-term interannual climate variations, and the potential implications of climate change and other large-scale disturbances.

Journal Article↗
PubMed2003

A multichannel automated chamber system for continuous measurement of forest soil CO2 efflux.

We developed a fast-response multi-chamber system for measuring soil-surface CO2 efflux (Fc). The chambers (90 x 90 x 50 cm, L x W x H) had lids that opened and closed automatically, and were connected in parallel to a single CO2 analyzer equipped with a 16-channel gas sampler. Between measurements the chamber lids were raised to allow precipitation and leaf litter to reach the enclosed soil surface. When a chamber was closed, it was ventilated with well-buffered ambient air (125 l min-1) that entered by an inlet on one chamber sidewall and exited through a large vent on the opposite sidewall. The pressure difference between the inside and outside of the chamber was less than 0.22 Pa. Two additional mixing fans maintained an air speed of 0.3 +/- 0.1 m s-1 at 20 cm above the soil surface. Air was withdrawn continuously from the inlets and outlets of each chamber, and fed sequentially to an infrared CO2 analyzer. With this system, we measured Fc in a 40-year-old temperate Pinus densiflora Sieb. & Zucc. forest from February 8 to May 30, 2001. Mean Fc increased steadily from 0.9 micro mol m-2 s-1 at the beginning of February to 4.6 micro mol m-2 s-1 by the end of May. There was a statistically significant correlation between Fc and surface soil temperature (r = 0.896; P < 0.0001), and the Q10 value was 2.8. Spatial variation of Fc was higher in the non-growing season than in the growing season. Measurements were not interrupted by either rain or snow.

Botany↗
PubMed2003

Field measurements of root respiration indicate little to no seasonal temperature acclimation for sugar maple and red pine.

Increasing global temperatures could potentially cause large increases in root respiration and associated soil CO2 efflux. However, if root respiration acclimates to higher temperatures, increases in soil CO2 efflux from this source would be much less. Throughout the snow-free season, we measured fine root respiration in the field at ambient soil temperature in a sugar maple (Acer saccharum Marsh.) forest and a red pine (Pinus resinosa Ait.) plantation in Michigan. The objectives were to determine effects of soil temperature, soil water availability and experimental N additions on root respiration rates, and to test for temperature acclimation in response to seasonal changes in soil temperature. Soil temperature and soil water availability were important predictors of root respiration and together explained 76% of the variation in root respiration rates in the red pine plantation and 71% of the variation in the sugar maple forest. Root N concentration explained an additional 6% of the variation in the sugar maple trees. Experimental N additions did not affect root respiration rates at either site. From April to November, root respiration rates measured in the field increased exponentially with increasing soil temperature. For sugar maple, long-term Q10 values calculated from the field data were slightly, but not significantly, less than short-term Q10 values determined for instantaneous temperature series conducted in the laboratory (2.4 versus 2.62.7). For red pine, long-term and short-term Q10 values were similar (3.0 versus 3.0). Sugar maple root respiration rates at constant reference temperatures of 6, 18 and 24 degrees C were measured in the laboratory at various times during the year when field soil temperatures varied from 0.4 to 16.8 degrees C. No relationship existed between ambient soil temperature just before sampling and root respiration rates at 6 and 18 degrees C (P = 0.37 and 0.86, respectively), and only a very weak relationship was found between ambient soil temperature and root respiration at 24 degrees C (P = 0.08, slope = 0.09). We conclude that root respiration in these species undergoes little, if any, acclimation to seasonal changes in soil temperature.

Acclimatization↗