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At least 1,441 records · Page 80Linked to original sources
PubMed2003

Use of retroillumination to visualize optical aberrations caused by tear film break-up.

PURPOSE: The aim of the current study was to develop quantitative methods to assess optical aberrations caused by tear film disruption. METHODS: We used standard fluorescein imaging (FL) and a novel retroillumination (RI) method to image tear film disruption in 12 eyes. Using a clinical slit lamp biomicroscope, we alternated between widefield blue and narrow-beam white light to obtain an interleaved series of FL and RI images of the time course and pattern of tear film break-up. We developed an optical analysis that indicates that the RI image should be proportional to the spatial derivative of the FL image. Intensity fluctuations in the RI images are due to thickness changes in the tear film, whereas intensity fluctuations in FL images are directly determined by tear film thickness. RESULTS: As predicted by optical analysis of RI, the spatial distribution of gaps in the tear film seen with fluorescein appeared as pairs of light and dark contours in the RI images, and a precise correspondence between the spatial derivative of the FL image (slope) and the RI image was found. Both methods showed a gradual spreading of the tear disruption during blink suppression that varied tremendously among eyes in both time and spatial pattern. Resumption of normal blinking did not produce an immediate reconstitution of the normal tear film, and areas of tear break-up created during blink suppression remained abnormal for up to several minutes of normal blinking. CONCLUSIONS: Our analysis indicates that both FL and RI have the potential to quantify optical changes occurring during tear break-up. These results support an interpretation of RI as an intensity-based method for mapping the highly irregular optical aberrations of the eye produced by tear film disruption.

Adult↗
PubMed2001

The shifting landscape of tick-borne zoonoses: tick-borne encephalitis and Lyme borreliosis in Europe.

The two major vector-borne diseases of northern temperate regions, tick-borne encephalitis (TBE) and Lyme borreliosis (LB), show very different epidemiological patterns, but both have increased significantly in incidence since the 1980s. Insight into the temporal dynamics of TBE, gained from statistical analysis of spatial patterns integrated with biological explanation, suggests that the recent increases in TBE cases in Central Europe and the Baltic States may have arisen largely from changes in human behaviour that have brought more people into contact with infected ticks. Under forecast climate change scenarios, it is predicted that enzootic cycles of TBE virus may not survive along the southern edge of their present range, e.g. in Slovenia, Croatia and Hungary, where case numbers are indeed decreasing. New foci, however, are predicted and have been observed in Scandinavia. At the same time, human impact on the landscape, increasing both the habitat and wildlife hosts of ticks, has allowed tick populations to multiply significantly. This probably accounts for a genuine emergence of LB, with its high potential transmission rate, in both the USA and Europe, although the rate of emergence has been exaggerated by improved surveillance and diagnosis.

Animals↗
PubMed1990

Neural mechanisms underlying the clasp-knife reflex in the cat. I. Characteristics of the reflex.

1. The goal of this study was to characterize the clasp-knife reflex by the use of stretch and isometric contraction of ankle extensor and flexor muscles in decerebrated cats with bilateral dorsal hemisections of their spinal cords at segment T12. 2. Stretch of an extensor muscle evoked inhibition in both homonymous and synergistic extensor muscles. The similarities between homonymous and synergistic inhibition suggest that similar neural mechanisms were responsible. 3. Homonymous and synergistic clasp-knife inhibition showed several characteristic features: 1) inhibition was evoked only by large stretches that produced significant muscle force. Short stretches that did not produce large forces evoked only excitation; 2) the magnitude of clasp-knife inhibition increased with increasing initial motor output, as reflected in the level of rectified EMG; 3) the time course of reflex inhibition evoked by ramp-and-hold stretch was characterized by segmentation of EMG during ramp stretch, dynamic overshoot of inhibition at the end-of-ramp stretch, and slow but usually complete decay of inhibition during maintained stretch; 4) inhibition persisted beyond the termination of stretch, and 5) inhibition showed adaptation to repeated stretch. 4. Isometric contraction of the soleus or medial gastrocnemius, produced by electrical stimulation of the muscle nerve, also evoked powerful synergistic-reflex inhibition via similar mechanisms as stretch-evoked, clasp-knife inhibition. Stretch evoked a greater degree of inhibition than did contraction, indicating that receptors responsive to both stretch and contraction contribute to clasp-knife inhibition. 5. The reflex effects produced by stretching the soleus or medial gastrocnemius were not confined to the homonymous and close synergistic muscles. Extensor muscles were inhibited and flexor muscles were excited throughout the hindlimb, which paralleled the pattern of a flexion-withdrawal reflex evoked by cutaneous stimulation. 6. Stretch of a flexor muscle, the tibialis anterior, evoked the same spatial pattern and time course of reflex action as stretch of an extensor muscle--inhibition of extensor muscles and excitation of flexor muscles throughout the hindlimb, including homonymous excitation of the tibialis anterior. 7. We conclude that neither Golgi tendon organs nor secondary spindle afferents are likely to contribute significantly to clasp-knife inhibition because their responses to stretch and isometric contraction differ from the reflex actions evoked by stretch and contraction.(ABSTRACT TRUNCATED AT 400 WORDS)

Action Potentials↗
PubMed2000

Expression of mRNA encoding IGF-I, IGF-II and type 1 IGF receptor in bovine ovarian follicles.

IGFs regulate gonadotrophin-stimulated proliferation and differentiation of granulosa and theca cells in vitro. However, the detailed pattern of mRNA expression of IGFs in bovine follicles remains controversial. The objectives of this study were therefore to describe the temporal and spatial pattern of expression of mRNA encoding IGF-I, IGF-II and the type 1 IGF receptor in bovine follicles in vivo. The expression of mRNA encoding IGF-II was detected in theca tissue from around the time of antrum formation up to and during the development of dominance. No IGF-II mRNA expression was detected in granulosa cells. In the majority of follicles we were unable to detect mRNA encoding IGF-I in either granulosa or theca tissue from follicles at any stage of development. Occasionally low amounts of mRNA encoding IGF-I were detected in the theca externa and connective tissue surrounding some follicles. Type 1 IGF receptor mRNA was detected in both granulosa and theca cells of preantral and antral follicles. Expression was greater in granulosa tissue compared with theca tissue. We also measured IGF-I and -II mRNA in total RNA isolated from cultured granulosa and theca cells using reverse transcriptase PCR. In contrast to the in vivo results, IGF-II mRNA was detected in both granulosa and theca tissue. IGF-I mRNA was detected in theca tissue and in very low amounts in granulosa cells. Using a specific IGF-I RIA we were unable to detect IGF-I immunoreactivity in granulosa conditioned cell culture media. Using immunohistochemistry we detected IGF-I immunoreactivity in some blood vessels within the ovarian stroma. We conclude from these results that IGF-II is the principal intrafollicular IGF ligand regulating the growth of bovine antral follicles. In preantral follicles the expression of mRNA encoding type 1 IGF receptor but absence of endogenous IGF-I or -II mRNA expression, highlights a probable endocrine mechanism for the IGF regulation of preantral follicle growth.

Animals↗
PubMed1984

Geographical patterns of heart disease in the Northeastern United States.

A 49-county region surrounding the urban corridor from New York through New Jersey to Philadelphia was the focus of an investigation of the spatial patterns of mortality from four types of heart disease: major cardiovascular, acute ischemic, chronic ischemic and cerebrovascular. The data used were age-adjusted mortality rates for white males and white females for the period 1968-1972. Central to the research was interest in the existence of county clusters with similar rates, high and low risk areas and possible associations of mortality rates with environmental and socioeconomic conditions. The tasks completed in this first phase of a projected multi-phase project led to the identification of four country clusters within the region. High major cardiovascular rates appear to make the Southern New Jersey cluster a high risk zone. In contrast, a Central Corridor cluster has relatively low rates for all the diseases. No clear pattern was in evidence for the Northwestern Periphery cluster. Finally, a stark contrast between acute and chronic ischemic rates appeared in the Urban Spur. The next step in this research will be to search for either consistency or deviation from these patterns in the 1973-1976 period. A risk factor data set will be created to analyze the patterns in greater detail.

Female↗
PubMed1999

The scale-invariant spatial clustering of leukemia in San Francisco.

This study tests the hypothesis of scale-invariant self-similar clustering of childhood leukemia cases over the San Francisco spatial area. The spatial distribution of leukemia cases has been investigated over seven scales of observation. A power-law relation of the variance to the mean of aggregates (quadrats) was used to detect possible scale-invariant self-similar clustering. The spatial distribution of leukemia cases (incidence from 1946 to 1964) was well fitted by a power-law function. The follow-up of clustering from the first years of case notification (1946) confirmed a scale-invariant self-similar spatial pattern with a stable power-law slope from 1952 onward. This pattern was shown to pertain specifically to school-age leukemia cases. Younger cases had a random distributional pattern over space. Observation and simulations of the distributional patterns revealed memory-keeping of historical (the pre-1953 era) fractal-like conditions. Based on a comparison of the leukemia fractal dimension with that of the city residential data, it is speculated that the current scale-invariant self-similar spatial clustering of the leukemia cases reflects the onset of the historical fractal patterning of the city residences at a particular time point in the past.

Child↗
PubMed2002

Cellular oscillators in animal segmentation.

Kinetic modeling of developmental dynamics requires detailed knowledge about genetic and metabolic networks that underlie developmental processes. However, such knowledge is not available for a vast majority of developmental processes. Here, we present an coarse-grained, phenomenological model of periodic pattern formation in multicellular organisms based on cellular oscillators (CO) that can be applied to systems for which little or no molecular data is available. An oscillatory process within cells serves as a developmental clock whose period is tightly regulated by cell-autonomous and non-autonomous mechanisms. A spatial pattern is generated as a result of an initial temporal ordering of the cell oscillators freezing into spatial order as the clocks slow down and stop at different times or phases in their cycles. When applied to vertebrate somitogenesis, the CO model can reproduce the dynamics of periodic gene expression patterns observed in the presomitic mesoderm. Different somite lengths can be generated by altering the period of the oscillation. There is evidence that a CO-type mechanism might also underlie segment formation in certain invertebrates, such as annelids and short germ insects. This suggests that the dynamical principles of sequential segmentation might be equivalent throughout the animal kingdom although most of the genes involved in segment determination differ between distant phyla.

Algorithms↗
PubMed1995

Adaptation mechanisms in spatial vision--II. Flash thresholds and background adaptation.

To examine how the mechanisms of light adaptation affect spatial pattern vision, contrast detection thresholds were measured for sinusoidal (increment-Gabor) probes on flashed backgrounds in the presence of steady adapting backgrounds. The thresholds for all spatial frequencies (1-12 c/deg), flashed-background intensities (dark to 4 log td) and adapting-background intensities (dark to 4 log td) were adequately described by a simple model consisting of a compressive nonlinearity (a modified Naka-Rushton function), a subtractive adaptation factor, and a multiplicative adaptation factor. For all five subjects the compressive nonlinearity was found to vary systematically with spatial frequency; for all but one subject, the subtractive and multiplicative factors were found to be relatively constant.

Adaptation, Ocular↗
PubMed1998

Vibrotactile pattern isolation/integration.

Temporal integration has been cited as a major factor in temporal masking. Two experiments were designed to examine the conditions under which temporal integration may aid or hinder the perception of vibrotactile spatial patterns. In Experiment 1, the subject's task was to discriminate between pairs of patterns. Each pattern was composed of two temporally separated pattern elements. When the task required the subjects to perceive the individual pattern elements, performance improved with temporal isolation--that is, performance improved as the temporal separation between the elements increased. In a second task, when the discrimination could be based on either the overall pattern shape or the pattern elements, temporal integration appeared to improve performance--that is, performance improved as the temporal separation decreased. In Experiment 2, an identification task was used. Several factors appeared to determine whether temporal integration aided or hindered pattern identification. When pattern elements similar to those in Experiment 1 were tested, performance improved with increasing temporal separation (isolation). A single function was fit to the discrimination (isolation) and identification (isolation) results. Whether temporal integration aids or hinders pattern perception appears to depend on pattern shape, the pattern elements, and the nature of the task.

Female↗
PubMed2005

Herbivores, vascular pathways, and systemic induction: facts and artifacts.

Over the past 10 years there has been tremendous growth in our understanding of molecular, chemical, and morphological induction of traits involved in the resistance of plants to herbivores. Although it is well established that the patterns of induction can be constrained by a plant's vascular architecture, studies often fail to account for these constraints. Failure to do so has the potential to severely underestimate both the patterns and extent of induction. Here I review (1) the evidence for vascular control of induced responses, (2) how interspecific variation in phyllotaxy influences spatial patterning of induction, (3) the factors, phloem transport and volatile production, that may break down vascular constraints and lead to more widespread induction, and (4) the experimental approaches that could be compromised when vascular architecture is not considered. I show that vascular constraints in systemic induction are commonplace, but vary among species. I suggest that when induction is more widespread than expected from patterns of phyllotaxy, differences in vascular connectivity and volatile production may be responsible. I argue that advances in the mechanisms of systemic induction, cross-talk between different signal transduction pathways, specificity of induction, costs and benefits of systemic induction, and the effects of induced changes on herbivores and their natural enemies require that experiments be designed to examine and/or control for vascular constraints in systemic induction.

Animals↗
PubMed1993

Frequency of synchronous oscillations of neuronal activity increases during development and is correlated to the number of synapses in cultured cortical neuron networks.

It has been proposed that synchronous oscillations of groups of neurons corresponding to sensory information and changes in temporal pattern of oscillations are important for processing of the information in the cortex. However, it has not been determined yet how the temporal or spatial pattern of such oscillations are regulated. We observed spontaneous synchronous oscillations of Ca2+ transients, which were caused by bursts of action potentials of neurons, even in cultured cortical neurons. The frequency of synchronous Ca2+ oscillations increased with development of synapses in cultured neurons and was highly correlated to the number of synapses formed in the same culture.

Animals↗
PubMed2003

Quantification of the spatial aspect of chaotic dynamics in biological and chemical systems.

The need to study spatio-temporal chaos in a spatially extended dynamical system which exhibits not only irregular, initial-value sensitive temporal behavior but also the formation of irregular spatial patterns, has increasingly been recognized in biological science. While the temporal aspect of chaotic dynamics is usually characterized by the dominant Lyapunov exponent, the spatial aspect can be quantified by the correlation length. In this paper, using the diffusion-reaction model of population dynamics and considering the conditions of the system stability with respect to small heterogeneous perturbations, we derive an analytical formula for an 'intrinsic length' which appears to be in a very good agreement with the value of the correlation length of the system. Using this formula and numerical simulations, we analyze the dependence of the correlation length on the system parameters. We show that our findings may lead to a new understanding of some well-known experimental and field data as well as affect the choice of an adequate model of chaotic dynamics in biological and chemical systems.

Animals↗
PubMed2005

Estimating dispersal from short distance spatial autocorrelation.

A series of theoretical studies has formed a strong connection between spatial statistics observed in populations and summary measures of the amount of dispersal. Synthesized, these developments allow dispersal to be indirectly estimated from standing spatial patterns of genetic variation under a range of conditions broad enough to be likely met in most populations of either plants or animals. The spatial correlations at the shortest distances are particularly robust to range of conditions and have disproportionately high statistical power. This review integrates theoretical results in a way that maximizes robustness and flexibility in the use of short distance autocorrelation to estimate Wright's neighborhood size, or the total variance in dispersal distances. Empirical guidelines are developed that are meant to be as practical and broad as possible. The guidelines focus on Moran's I-statistics for diploid genotypes converted to allele frequencies, but are also extended to or compared with several other approaches.

Animals↗
PubMed2003

GLIS3, a novel member of the GLIS subfamily of Krüppel-like zinc finger proteins with repressor and activation functions.

In this study, we describe the identification and characterization of a novel transcription factor GLI-similar 3 (GLIS3). GLIS3 is an 83.8 kDa nuclear protein containing five C2H2-type Krüppel-like zinc finger motifs that exhibit 93% identity with those of GLIS1, however, little homology exists outside their zinc finger domains. GLIS3 can function as a repressor and activator of transcription. Deletion mutant analysis determined that the N- and C-termini are required for optimal transcriptional activity. GLIS3 binds to the GLI-RE consensus sequence and is able to enhance GLI-RE-dependent transcription. GLIS3(DeltaC496), a dominant-negative mutant, inhibits transcriptional activation by GLIS3 and GLI1. Whole mount in situ hybridization on mouse embryos from stage E6.5 through E14.5 demonstrated that GLIS3 is expressed in specific regions in developing kidney and testis and in a highly dynamic pattern during neurulation. From E11.5 through E12.5 GLIS3 was strongly expressed in the interdigital regions, which are fated to undergo apoptosis. The temporal and spatial pattern of GLIS3 expression observed during embryonic development suggests that it may play a critical role in the regulation of a variety of cellular processes during development. Both the repressor and activation functions of GLIS3 may be involved in this control.

Amino Acid Sequence↗
PubMed1985

Spatial-frequency spectrum of patterns changes the visibility of spatial-phase differences.

This study showed that spatial-frequency components over a 4-octave range affected the visibility of spatial-phase differences. Contrast thresholds were measured for discrimination between two (+45- and -45-deg) spatial phases of a sinusoidal test grating added to a background grating. The background could contain one or several sinusoidal components, all in 0-deg phase. Phase differences between the test and the background were visible at lower constrasts (1) when test and background frequencies were harmonically related than when they were not, (2) when test and background frequencies were within 1 octave than when they were farther apart, (3) when the fundamental frequency of the background was low than when it was high, and (4) for some discriminations more than for others, after practice. The visibility of phase differences was not affected by additional components in the background if the fundamental and difference frequencies of the background remained unchanged. Observers' reports of their strategies gave information about the types of attentive processing that were used to discriminate phase differences. Attentive processing facilitated phase discrimination for multifrequency gratings spanning a much wider range of spatial frequencies than would be possible by using only local preattentive processing. These results were consistent with the visibility of phase differences being processed by some combination of even- and odd-symmetric simple cells tuned to a wide range of different spatial frequencies.

Humans↗
PubMed2006

Global patterns of geographic range size in birds.

Large-scale patterns of spatial variation in species geographic range size are central to many fundamental questions in macroecology and conservation biology. However, the global nature of these patterns has remained contentious, since previous studies have been geographically restricted and/or based on small taxonomic groups. Here, using a database on the breeding distributions of birds, we report the first (to our knowledge) global maps of variation in species range sizes for an entire taxonomic class. We show that range area does not follow a simple latitudinal pattern. Instead, the smallest range areas are attained on islands, in mountainous areas, and largely in the southern hemisphere. In contrast, bird species richness peaks around the equator, and towards higher latitudes. Despite these profoundly different latitudinal patterns, spatially explicit models reveal a weak tendency for areas with high species richness to house species with significantly smaller median range area. Taken together, these results show that for birds many spatial patterns in range size described in geographically restricted analyses do not reflect global rules. It remains to be discovered whether global patterns in geographic range size are best interpreted in terms of geographical variation in species assemblage packing, or in the rates of speciation, extinction, and dispersal that ultimately underlie biodiversity.

Animals↗
PubMed2006

Electric field induced instabilities: waves and stationary patterns.

We examine a prototypical ionic reaction-diffusion system involving the well-known iodate-arsenous acid reaction in an electric field at a constant current density. By taking into consideration of the spatial inhomogeneities in electric field intensity and charge density due to ionic migration and diffusion using charge balance condition, we look for the different instability regions in the appropriate parameter space. We show that the model admits of both absolute and convective instability resulting in the development of propagating waves and also stationary spatial patterns at times.

Journal Article↗
PubMed1990

Developmental patterning of the carbohydrate antigen FC10.2 during early embryogenesis in the chick.

An oligosaccharide antigen (FC10.2), formerly described only in mammalian cells and secreted glycoproteins, has been detected and found to display striking temporal and spatial patterning in the chick during early embryonic development. This antigen is expressed on type 1 chains, which are isomers of oligosaccharides of the poly-N-acetyllactosamine series (type 2 chains). Immunoreactivities before and after neuraminidase treatment of serial sections of chick embryos during the first 17 stages of development indicate that the FC10.2 structure occurs predominantly in the sialylated form (S-FC10.2). The FC10.2 and S-FC10.2 antigens are prominent markers of the primordial germ cells, being strongly expressed by these cells from the pre-primitive streak stage onwards. S-FC10.2 is also a clear marker of the pronephric duct from its first appearance. Initially present over the entire apical surface of the ectoderm, antigenicity diminishes in an antero-posterior direction as neurulation proceeds. A unique pattern for a carbohydrate antigen is displayed by cells of the primitive streak; antigenicity is lost with de-epithelialisation and ingression, but is regained in a pericellular distribution on the mesoderm cells that emerge from the primitive streak. Thereafter, successive changes in expression and distribution of FC10.2 and S-FC10.2 are features of mesodermal tissues, particularly during somitogenesis. These antigens are prominent components of the extracellular matrix around the notochord and sclerotome cells. They are also prominent posteriorly in the subectodermal region, ceasing abruptly at the lateral limits of the embryo proper. Although no absolute correlations can yet be made, several features of the distribution of these antigens suggest that they may be integral components of, or ligands for, cell adhesion molecules.

Animals↗