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At least 145 records · Page 8Linked to original sources

The origin of order effects in the results of the bi-thermal caloric test.

An order effect, characterized by a progressive decline in response magnitude, has been observed in the caloric test, and it has been suggested that the effect may be countered by applying a correction. This study was undertaken to determine whether the effect has its origin in physiological adaptation or in calibration drift of the recording system. Thirty-two normal subjects underwent the caloric test, in which their nystagmus was monitored simultaneously by both electronystagmography (ENG) and videonystagmography (VNG). The experimental design also allowed other aspects of the caloric test sequence to be investigated. No evidence of physiological adaptation of the response was seen. However, there was a significant change in corneoretinal potential, and hence ENG calibration, during the tests. This was more marked if subjects' eyes were maintained in darkness. It is recommended that no correction be made for order effects but that the calibration of ENG-based systems is adjusted immediately prior to each caloric irrigation.

Action Potentials↗

Design and performance of a planar-array MIT system with normal sensor alignment.

In this study the performance of a planar array for magnetic induction tomography (MIT) was investigated and the results of measurements to determine the precision and sensitivity of the sensor were undertaken. A planar-array MIT system utilizing flux-linkage minimization for the primary field has been constructed and evaluated. The system comprises 4 printed excitation coils of 4 turns which were shielded, 8 surface-mount inductors of inductance 10 microH as sensor, mounted such that in principle no primary-field flux threads them, and a calibration coil to produce a strong primary field. The excitation current was multiplexed via relays to drive the excitation and reference coils. The noise values were similar in real and imaginary components in the lower frequencies and the factor to which the primary field could be reduced was greatest in the nearest coil. Methods for determining the true real and imaginary components and for flux-linkage minimization for the primary field for variations in channel sensitivities are described and the results of measurements of the system's noise and drift are given. A SNR of 47 dB was observed at 4 MHz when a 0.3 Sm-1 saline filled tank of dimensions 20 cmx20 cmx10 cm was placed centrally over the array. Finally, images were reconstructed from measurements of saline samples in a free space background, with the samples moved past the array in 21 1 cm steps to emulate mechanical scanning of the array. The image reconstruction characteristics of the planar array in conjunction with the reconstruction technique employed are discussed.

Animals↗

Self-organized waves in annular rf weakly magnetized dusty plasmas

Self-organized waves and the associated dust particle motion are studied experimentally in a low-pressure annular rf weakly magnetized dusty discharge system. Low-frequency drift waves with strong modulation on plasma density and dark space (sheath) width, traveling azimuthally with mode number m=1, are self-excited. Period-n and quasiperiodic states are also observed at higher rf power. Dust particles in the liquid state show collective elliptical cyclic motion in the low-frequency ionization-drift wave but respond only weakly to waves with frequencies above 50 Hz. When dust is added to a dust-free magnetized discharge in which there exists an ionization drift wave at 20 KHz, the wave amplitude is reduced and the frequency is down shifted.

Journal Article↗

The implications of the 'hayflick limit' for aging of the organism have been misunderstood by many gerontologists.

Many gerontologists have been misdirected by the conclusion that the decline in the division potential of some cell compartments during aging is due to the increase in nondividing cells. Terminal postmitotic cells are called senescent cells although there is no evidence that they have any implications for aging of the organism. In an experimental system, Hayflick found a drift in cell functions created by proliferation, which is of relevance to the aging of the organism. Experimental evidence suggests that the presence of terminal postmitotic cells in excess in the tissues is associated with aging-related pathological states.

Aging↗

Understanding the biases of generalised recombination: part I.

This is the first part of a two-part paper where we propose, model theoretically and study a general notion of recombination for fixed-length strings, where homologous recombination, inversion, gene duplication, gene deletion, diploidy and more are just special cases. The analysis of the model reveals that the notion of schema emerges naturally from the model's equations. In Part I, after describing and characterising the notion of generalised recombination, we derive both microscopic and coarse-grained evolution equations for strings and schemata and illustrate their features with simple examples. Also, we explain the hierarchical nature of the schema evolution equations and show how the theory presented here generalises past work in evolutionary computation. In Part II, the study provides a variety of fixed points for evolution in the case where recombination is used alone, which generalise Geiringer's theorem. In addition, we numerically integrate the infinite-population schema equations for some interesting problems, where selection and recombination are used together to illustrate how these operators interact. Finally, to assess by how much genetic drift can make a system deviate from the infinite-population-model predictions we discuss the results of real GA runs for the same model problems with generalised recombination, selection and finite populations of different sizes.

Algorithms↗

[Genetic diversity and racial mixture in Amerindians from Costa Rica and Panama].

The genetic diversity of nine Amerindian tribes (Boruca, Bokota, Bribrí, Cabecar, Guatuso, Guaymí, Huetar, Kuna and Teribe) from Costa Rica and Panama were analyzed using 48 loci of enzymatic systems, blood groups and serum proteins. The average heterozygosity (H) and the frequency of polymorphisms (P) for this assemblage are relatively low (H = -0.055; P = 0.217). The genetic differentiation within tribes is also low with the exception of the Cabecar (Gst = 0.049). However it is high between tribes (Gst = 0.073). These populations have some racial admixture and negro and caucasian genes are present in different frequencies (1-30%) depending on their ecological and cultural background. Mating systems and random genetic drift should explain these results. In a broad sense the genetic diversity of these Chibchan tribes are similar to others from South America which use different languages.

Costa Rica↗

Glass and antimony electrodes for long-term pH monitoring: a dynamic in vitro comparison.

OBJECTIVE: To compare the performance of combined glass microelectrodes with monocrystalline and polycrystalline antimony electrodes with external reference in a 24-h dynamic in vitro study. DESIGN AND METHODS: In an artificial stomach, the pH of the contents titrated from pH1-7 and back by NaOH and HCI was simultaneously measured at 37 degrees C with antimony and glass probes connected to three recording devices. The recorded data were compared with data monitored continuously by a laboratory pH measurement system. The sensitivity and drift of glass microelectrodes were also analysed in intensive-care unit patients during intragastric pH monitoring for up to 96 h. RESULTS: The sensitivities of antimony polycrystalline, monocrystalline and of glass electrodes were 54.6, 55.3, and 61.8 mV/pH, respectively. The hysteresis was 6.4, 7.2 and 2.75 mV for antimony polycrystalline, monocrystalline and for glass electrodes, respectively. The drift in 24 h was -0.1 pH for glass over the pH range 1-7, and +0.3 pH over pH 1-2.5, and +0.15 pH over pH 2.5-7 for both of the antimony electrodes. The response times of both antimony and glass electrodes were similar over the pH range 2.5-7. The difference in the percentages of time below pH 1.5 was significant: 28.2% for glass, 17.3% for antimony polycrystalline and 18.1% for monocrystalline electrodes, respectively (P < 0.05). However, the difference in the percentages of time below pH 4 was not significant. After 96 h intragastric pH monitoring in six intensive-care unit patients, the mean drift of glass electrodes was 0.15 pH (range, pH 0.1-0.2) and the mean change in sensitivity 1.2%. CONCLUSIONS: (1) Antimony electrodes may be acceptable for intra-oesophageal pH monitoring but are not suitable for intragastric use. (2) The use of glass microelectrodes is recommended for intragastric pH monitoring, particularly when extended monitoring over periods longer than 24 h is required.

Aged↗

[Complementarity-determining region 3 analysis of T cell receptor beta chain variable region in peripheral blood mononuclear cells of patients with systemic lupus erythematosus].

OBJECTIVE: To analyze the drift of the complementarity-determining region 3 (CDR3) of T cell receptor (TCR) beta chain variable region (TCR BV) in peripheral blood mononuclear cells (PBMCs) of patients with systemic lupus erythematosus. METHODS: Immunoscope spectratyping techniques was used to analyze the distribution of TCRbeta chain CDR3 in 5 normal blood donors and the dominant CDR3 in the PBMCs in 5 SLE patients. Sequence analysis of the CDR3 region in monoclonal or oligoclonal T cells was performed. RESULTS: The spectratypes of TCR BV gene CDR3 region showed Gaussian distribution in the 5 normal blood donors. The 5 SLE patients, however, displayed anomalous proliferation and oligoclonal expansion of the T cells was observed in different TCR BV families with different CDR3 sequences. CONCLUSION: Noticeable drift of TCRbeta chain CDR3 can be seen in active SLE, indicating possible association of selective expression of TCR with immune pathogenesis in SLE. Determination of specific TCR CDR3 sequence provides a new means for studying the pathogenesis and personalized treatment of SLE.

Amino Acid Sequence↗

The oculomotor neural integrator uses a behavior-related coordinate system.

Coordinate systems are a central issue in computational neuroscience: are they explicitly represented at some reductive level of brain function, and if so, are they only trivial products of associated anatomic geometries? This investigation examined these questions in the neural network that holds eye position, the so-called oculomotor integrator. Since neural activity in the integrator is behaviorally constrained by Listing's law to encode horizontal and vertical eye positions within Listing's plane and zero rotation about the orthogonal torsional axis, it was hypothesized that any integrator coordinate system would be developmentally predisposed to align with Listing's plane. A test for this hypothesis was developed with the use of a kinematically correct model of the three-dimensional saccade generator. Three mathematical integrators were used to represent the neuron populations that control torsional, vertical, and horizontal eye position. Simulated failure of the torsional and vertical integrators produced eye position drift that was parallel to the horizontal plane containing the intrinsic coordinate axes for these components. Furthermore, this drift settled toward a resting range parallel to the intrinsic vertical coordinate axis (for horizontal rotation). To experimentally identify these intrinsic population coordinates, three-dimensional eye positions were measured in four Macaca fascicularis after injection of muscimol into the mesencephalic interstitial nucleus of Cajal (INC), a technique that disrupts the torsional and vertical integrators (Crawford et al., 1991). INC inactivation produced exponential, position-dependent decay in vertical and torsional eye position. There was no position-dependent horizontal drift, but in the original coordinate system (defined arbitrarily by the measurement apparatus) there was a constant-direction horizontal drift. However, this extraneous horizontal drift was eliminated when the data were transformed into a coordinate system that aligned with Listing's plane. The direction of torsional drift correlated well (r = 0.85), across all experiments, with the normal to Listing's plane. On average, these two directions were only 0.06 degrees from perfect alignment. In contrast, drift direction did not correlate with stereotaxic coordinates (r = 0.10). Furthermore, the drift settled toward a range parallel to and correlated with Listing's plane (r = 0.94), whereas this range did not correlate well with stereotaxic coordinates (r = 0.02). On average, the resting range was aligned within 0.98 degrees of Listing's plane. Finally, this resting range was near orthogonal (average 91.9 degrees across all experiments) to the direction of torsional drift. These results show that integrator cell populations use an orthogonal, craniotopic coordinate system that aligns with Listing's plane.(ABSTRACT TRUNCATED AT 250 WORDS)

Animals↗

Disconjugate adaptation of the vertical oculomotor system.

Conjugate post-saccadic eye drift can be induced in normal humans if a visual pattern is made to drift after every saccade. This study examines the ability of normal humans to create disconjugate vertical post-saccadic drift. Identical fuseable patterns were presented dichoptically, one to each eye. At the end of each vertical saccade one pattern drifted up and the other down, by 5% of the saccade amplitude. Five subjects were trained for 2-3 hr. Eye movements were recorded with eye coils. Normal vertical saccades along the midline were remarkably conjugate and post-saccadic drift was minimal. Training produced only small disconjugate post-saccadic drift (0.14 deg) but substantial saccade amplitude disconjugacy (0.70 deg). For several subjects, the induced disconjugacies persisted even for saccades in the dark indicating that adaptive changes occurred in the binocular coordination of vertical saccades. Apparently vertical disparate post-saccadic retinal slip is not sufficient to stimulate significantly the saccade pulse-step matching mechanism which is believed to control post-saccadic eye drift. The changes we observed aimed to reduce position disparity and not retinal slip in each eye.

Adaptation, Ocular↗

The "macromolecular tourist": universal temperature dependence of thermal diffusion in aqueous colloidal suspensions.

By performing measurements on a large class of macromolecular and colloidal systems, we show that thermophoresis (particle drift induced by thermal gradients) in aqueous solvents displays a distinctive universal dependence on temperature. For systems of particles interacting via temperature-independent forces, this behavior is strictly related to the solvent thermal expansivity, while an additional, T-independent term is needed to account for the behavior of "thermophilic" (migrating to the warmth) particles. The former relation between thermophoresis and thermal expansion may be exploited to envisage other fruitful studies of colloidal diffusion in inhomogeneous fluids.

Colloids↗

Antigenic drift, antigenic shift and interferon antagonists: how bunyaviruses counteract the immune system.

Members of the Bunyaviridae family are amongst the most widespread viruses in the world. They can be found on every inhabited continent at virtually every latitude, and are able to infect a wide range of arthropods, plants and mammals including humans. More than 300 named viruses are contained within the family Bunyaviridae (Virus Taxonomy: Seventh Report of the International Committee on Taxonomy of Viruses (2000) 599), and several members cause significant disease in humans or domestic animals. Despite being recognised as an emerging threat, relatively little is known about their virulence mechanisms. Here, we try to summarise the current state of knowledge about how the viruses of the Bunyaviridae succeed in establishing infection in the face of a powerful immune system.

Animals↗

Predicted and measured levels of azinphosmethyl in the Lourens River, South Africa: comparison of runoff and spray drift.

Runoff and spray drift are important sources of nonpoint pesticide pollution in surface waters, but few studies have directly compared these routes of input in an exposure assessment scenario. To this end, a runoff formula suggested by the Organization for Economic and Cooperative Development (Paris, France) and basic drift values (95th percentiles) were integrated into a geographical information system (GIS) to predict runoff and spray drift-related loading of azinphosmethyl (AZP) in the Lourens River (LR), South Africa. The GIS-integrated calculations were first validated in the tributaries of the river, where measured loads were well predicted for both runoff (r(20 = 0.95; p < 0.0001; n = 9) and spray drift (r(2) = 0.96; p = 0.0006; n = 8). Through extrapolation to the catchment scale containing 400 ha of orchards, the GIS-integrated calculations predicted similar loads of AZP as measured in the Lourens River mainstream for six runoff (between a factor of 1.03 and 1.86 lower) and six spray drift (between a factor of 1.1 and 2.4 higher) events. Mean measured loads per event were significantly (p = 0.004) higher for runoff (27.8 +/- 19.1 g) than for spray drift (0.69 +/- 0.32 g). Based on long-term meteorological data and average application regimes, runoff leads to a higher annual load (47.6 g) than spray drift (5.5 g) in the Lourens River. Runoff is clearly a more important source of nonpoint pollution in the studied catchment, and mitigation strategies should focus first on addressing this aspect on a catchment scale and second on addressing problem areas on a subcatchment scale.

Azinphosmethyl↗

Genetic drift within a protected polymorphism: enigmatic variation in color-morph frequencies in the candy-stripe spider, Enoplognatha ovata.

The candy-stripe spider, Enoplognatha ovata, exhibits a striking color polymorphism comprising three morphs. A number of lines of evidence strongly suggest that this polymorphism is maintained by natural selection: its presence in a sister species, E. latimana; the physical nature of the variation; the virtual lack of monomorphic populations; the highly consistent rank-order of morphs within populations; and the presence of large-scale clines associated with climatic variables. However, the absence of selection is equally strongly suggested by very local surveys of morph frequencies over space and time, perturbation experiments, and a variance in morph frequency between populations that is virtually independent of spatial scale. In addition, local spatial patterns in one study site (Nidderdale, Yorkshire, England) have been explained in terms of intermittent drift over half a century ago, a hypothesis supported here by the distributions of four other genetic markers (two allozyme and two visible polymorphisms). A heuristic model is suggested that reconciles these apparently contradictory messages regarding the importance of drift and selection in this system. It is proposed that when allele frequencies of the color morph redimita lie between approximately 0.05 and 0.3, the deltaq on q plot is very shallow, so that within this region, where the majority of populations lie, selection is weak and drift is the major force determining local morph frequencies. However, outside this range of frequencies, powerful selection acts to protect the polymorphism. This model may apply to polymorphisms in other species and explain why evidence of selection in natural populations is often elusive.

Animals↗

[Medico-genetic study of the population of Turkmenia. IV. The population geography of hemoglobinopathies].

Large-scale screening for hereditary haemoglobinopathies in five districts and among main Turkmen tribes was carried out. The frequencies of ABO and HP pheno- and genotypes were determined in the same populations. The different kinds of haemoglobinopathies genes were discovered (beta +, beta 0-thalassemia, alpha beta-thalassemia, alpha-thalassemia, HPFH, haemoglobins D and E). The geographic and ethnic differentiation of Turkmen population for beta-thalassemia géne was discovered. The FST values were found to be the same for ABO, Hp and beta-thal gene systems. The role of genetic drift in differentiation of Turkmen population is discussed.

ABO Blood-Group System↗

The effect of genetic drift on the variance/covariance components generated by multilocus additive x additive epistatic systems.

The effect of population bottlenecks on the components of the genetic variance/covariance generated by n neutral independent additive x additive loci has been studied theoretically. In its simplest version, this situation can be modelled by specifying the allele frequencies and homozygous effects at each locus, and an additional factor measuring the strength of the n-th order epistatic interaction. The variance/covariance components in an infinitely large panmictic population (ancestral components) were compared with their expected values at equilibrium over replicates randomly derived from the base population, after t bottlenecks of size N (derived components). Formulae were obtained giving the derived components (and the between-line variance) as functions of the ancestral ones (alternatively, in terms of allele frequencies and effects) and the corresponding inbreeding coefficient F(t). The n-th order derived component of the genetic variance/covariance is continuously eroded by inbreeding, but the remaining components may increase initially until a critical F(t) value is attained, which is inversely related to the order of the pertinent component, and subsequently decline to zero. These changes can be assigned to the between-line variances/covariances of gene substitution and epistatic effects induced by drift. Numerical examples indicate that: (1) the derived additive variance/covariance component will generally exceed its ancestral value unless epistasis is weak; (2) the derived epistatic variance/covariance components will generally exceed their ancestral values unless allele frequencies are extreme; (3) for systems showing equal ancestral additive and total non-additive variance/covariance components, those including a smaller number of epistatic loci may generate a larger excess in additive variance/covariance after bottlenecks than others involving a larger number of loci, provided that F(t) is low. Our results indicate that it is unlikely that the rate of evolution may be significantly accelerated after population bottlenecks, in spite of occasional increments of the derived additive variance over its ancestral value.

Animals↗

Three mixed venous saturation catheters in patients with circulatory shock and respiratory failure.

Thirty-one critically ill patients with acute respiratory failure and circulatory shock were divided into three groups. Group 1 included 11 patients with an inserted mixed venous saturation (SvO2) catheter using three-reference wavelengths and characterized by one transmitting and one detecting fiberoptic filament (Oximetrix opticath catheter); group 2 included eight patients with an inserted SvO2 catheter using two-reference wavelengths and characterized by one transmitting and one detecting fiberoptic filament; (Edwards sat-one catheter); group 3 included 12 patients with an inserted SvO2 catheter using two-reference wavelengths and characterized by one transmitting and two detecting fiberoptic filaments. Once calibration procedures were performed, SvO2 measured by the catheter and by an hemoximeter OSM 3 (reference value) were compared following each therapeutic intervention. Over a period of 1.5 to 6 hours during which the hematocrit value remained unchanged, 119 measurements were obtained in group 1, 91 in group 2 and 181 in group 3. The dispersion of SvO2 values was much more pronounced with the two-reference wavelength systems using either one or two detecting fiber optic filaments, and the correlation coefficient was significantly higher with the three-reference wavelength system (r = 0.970 for the Oximetrix catheter vs r = 0.855 for the Edwards catheter and r = 0.826 for the Spectramed catheter, p less than 0.001). After 24 hours, the spontaneous drifts in the two-reference wavelength systems, using either one or two detecting fiber optic filaments (expressed as the SvO2 value measured by the catheter minus the reference SvO2 value) were significantly higher than the spontaneous drift in the three-reference wavelength system (9.3 +/- 7 percent for the Edwards catheter and +/- 6 +/- 4.1 percent for the Spectramed catheter vs 3.3 +/- 3.1 percent for the Oximetrix catheter, p less than 0.05). This study shows that a three-wavelength system is more accurate than a two-wavelength system for measuring acute changes in SvO2. The addition of a second detecting fiber optic filament does not seem to improve the accuracy of the system when SvO2 changes occur in conditions of stable hematocrit.

Carboxyhemoglobin↗