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Conformation, Inversion Barrier, and Solvent-Induced Conformational Shift in Exo- and Endo/Exo-Calix[4]arenes.

Calixarenes 4a and 4b having hydroxyl groups in endo and exo positions and the ethanediyl-bridged exo-calixarene 5a were synthesized by a stepwise strategy. Single-crystal X-ray structures were obtained for 4a and for the exo-calixarene 3d, showing the molecules to exist in the 1,2-alternate conformation which is also found for 4a,b in solution. The inversion barriers of 4a and 4b (10.3 and 10.8 kcal mol(-1)) are similar to that determined for the endo-dihydroxycalixarene 12, indicating that the additional intramolecular hydrogen bond between the exo OH groups does not decrease the flexibility of the molecule. In CDCl(3) solution exo-calixarene 5a adopts a 1,2-alternate conformation with the methyl group at the bridge located in an axial position, while in DMSO-d(6) the conformation adopted is the partial cone. Similar solvent-induced conformational shifts were found for the exo-calixarenes 3b and 3d. MM3 calculations predict that the cone form is the lowest energy conformation of 4 and the exo-calixarenes 3 and 5. The calculations suggest that the conformational preferences of the methyl group at the bridge for either the axial or equatorial positions are in large part determined by the repulsive steric interactions with the hydroxyl groups. The inversion barrier of 4b is satisfactorily reproduced by calculations, which indicate that the rotation of the exo rings is less energetically demanding than the rotation of the endo rings.

Journal Article↗

The effect of guest inclusion on the crystal packing of p-tert-butylcalix[4]arenes.

The effect of guest inclusion in the crystal structures of p-tert-butylcalix[4]arene complexes has been investigated through a combination of molecular-mechanics-based solid-state calculations and statistical analysis, with a procedure previously developed and used to study a variety of classes of organic compounds. The results indicate that the general trends in the behavior of calixarene crystals are very similar, irrespective of the presence or the absence of a guest encapsulated in the calixarene cavity, and are similar to those obtained for most other organics. Some differences arise only when a statistical analysis of several descriptors is performed. The investigation of the description of endo calix[4]arenes is extended by calculating the packing coefficient of the guest inside the calixarenes cavity, C(cavity), which shows that most of them are well accommodated inside the host and have coefficients that are similar to those found in the liquid phase. Further evaluation of the interaction energies between guest and host shows that the coefficients tend to be smaller than 30 kcal mol(-1). The combination of small C(cavity) and low interaction energies suggests that guest mobility in the solid could be rather common in endo complexes of calixarenes.

Binding Sites↗

Bilayers, corrugated bilayers, and coordination polymers of p-sulfonatocalix[6]arene.

Exploration into the host-guest supramolecular chemistry of p-sulfonatocalix[6]arene with pyridine N-oxide and 4,4'-dipyridine N,N'-dioxide has resulted in the characterization of three new structural motifs with the calixarene in the "up-down" double partial cone conformation. Two are hydrogen-bonded network structures formed with pyridine N-oxide and either nickel or lanthanide metal counterions (1 and 2, respectively). Complex 1 displays host-guest interactions between pyridine N-oxide and the calixarene in the presence of hexaaquanickel(II) counterions. Complex 2 demonstrates selective coordination modes for different lanthanides involving the calixarene and pyridine N-oxide. The third structure, 3, is a coordination polymer which is formed with 4,4'-dipyridine N,N'-dioxide molecules which span a hydrophilic layer and join lanthanide/p-sulfonatocalix[6]arene fragments. Although complexes 1-3 all have the calixarene in the "up-down" double partial cone conformation, 1 and 3 form bilayer arrangements within the extended structures while 2 forms a previously unseen corrugated bilayer arrangement.

Calixarenes↗

Calix[6]arene-based cuprous "funnel complexes": a mimic for the substrate access channel to metalloenzyme active sites.

Two calixarene-based model systems (a and b) for monocopper enzymes are compared. Both present a tris(pyridine) coordination site for Cu that mimics the imidazole-rich neutral binding site in enzymes. Upon reaction with 1 equiv of copper(I), the tridentate ligands gave rise to ill-defined unsymmetrical complexes. However, in the presence of an organonitrile RCN (R = Me, Et, Ph), tetrahedral species were obtained, with the nitrilo ligand included in the calixarene hydrophobic cone. System b presents a larger cavity than system a, with a wider opening thanks to the removal of three tBu groups from the calixarene structure. As a result, the recognition pattern for MeCN vs PhCN is inverted, and the relative affinity constants differ by 3 orders of magnitude. The mechanism of the acetonitrile exchange at the cuprous centers was studied by (1)H NMR spectroscopy. Thermodynamic and kinetic data show that it follows a dissociative pathway in both cases. The main differences between systems a and b stem from the presence of a door that entraps the guest in case a. In system b indeed, the removal of three calixarene tBu groups led to a 100-fold acceleration of the MeCN exchange rate. Hence, these supramolecular systems provide a rare and interesting model for the hydrophobic substrate channel giving access to a metalloenzyme active site.

Calixarenes↗

Scandium(III) coordination polymers containing capsules based on two p-sulfonatocalix[4]arenes.

Reactions of sodium p-sulfonatocalix[4]arene and scandium(III) tristriflate in the presence, and absence, of [18]crown-6 give the crystalline complexes [Sc2(mu-OH)2(H2O)10][Na4(H2O)8-[calix[4]arene(SO3)4]2).13 H2O and [[Sc2(mu-OH)2(H2O)8][Sc(H2O)4]2[calix[4]-arene(SO3)4-H+]2([18]crown-6).16H2O. Both complexes involve novel coordination polymers with calixarene units linked through sodium or scandium centers and also feature capsule assemblies through to the head-to-head association of calixarenes. A linear array of capsules associated with an infinite chain of aquo-bridged sodium ions, and an aquated hydroxy-bridged scandium(III) dimer, [Sc2(mu-OH)2(H2O)10]4+, are found in the absence of the crown ether. In the presence of [18]crown-6 both hydrated scandium monomers and dimers bridge between calixarenes in a two-dimensional coordination network. The crown ethers reside in cavities created by two calixarenes from adjacent polymeric sheets via a variety of supramolecular interactions(hydrogen-bonding, shape complementarity), and effectively add a third dimension to the network. The extended structure of both of these polymers is highly porous, and resembles a bilayer.

Journal Article↗

Controlling the conformation and interplay of p-sulfonatocalix[6]arene as lanthanide crown ether complexes.

Control over the conformational flexibility of p-sulfonatocalix[6]arene in the solid state is possible in the presence of varied stoichiometric amounts of [18]crown-6 and selected lanthanide(III) chlorides. Complexes 1 and 2 have the calixarene in the elusive up-up double cone conformation, whilst complex 3 has the calixarene in the centrosymmetric up-down double partial cone conformation, whereby it acts as a divergent receptor. Complex 1 has a double molecular capsule arrangement which is composed of two p-sulfonatocalix[6]arenes shrouding two [18]crown-6 molecules, also with both coordinated and homoleptic aquated lanthanide ions around the hydrophilic sulfonate rims of the calixarenes. Complex 2 has a ferris wheel arrangement with one lanthanide metal centre coordinated to a sulfonate group and another coordinated to the crown ether whilst tethered to a sulfonate group of the calixarene. Complex 3 forms from a solution with large excess of [18]crown-6, and possesses a crown ether molecule in each of the partial cones and has homoleptic aquated lanthanide ions involved in a complicated hydrogen-bonding regime within the extended structure.

Journal Article↗

Diphosphines with expandable bite angles: highly active ethylene dimerisation catalysts based on upper rim, distally diphosphinated calix[4]arenes.

The binding properties of two large diphosphines, cone-5,17-dibromo-11,23-bis(diphenylphosphino)-25,26,27,28-tetrapropoxycalix[4]arene (1) and cone-5,17-bis(diphenylphosphino)-25,26,27,28-tetrapropoxycalix[4]arene (2) toward Ni(II) centres have been investigated. Whatever the starting complex, NiBr2 or [NiCp]BF4, quantitative formation of a chelate complex was observed, illustrating the preorganisation of the ligands. An X-ray structure determination was carried out for [NiCp1]BF4 which revealed that the nickel atom is positioned to one side of the calixarene axis, the PNiP plane being roughly parallel to the calixarene reference plane. The molecule has C(1) symmetry in the solid state, a feature which is also observed in solution at low temperature. As shown by variable-temperature 1H and 31P NMR studies, the complex undergoes two distinct motions: 1) a fan-like swinging of the coordination plane which displaces the metal from one side of the calixarene axis to the other, a motion during which the PNiP angle is likely to undergo a significant enlargement; 2) a rapid oscillation of each PPh2 unit about the corresponding Ni--P bond. In the latter dynamics the two endo-oriented PPh rings alternately occupy the calixarene entry. The two flexible ligands were assessed in ethylene oligomerisation. Activation with methylaluminoxane of the paramagnetic complexes [NiBr2.(1 or 2)] afforded highly active ethylene dimerisation catalysts, with turnover frequencies up to 10(6) (mol C2H4) (mol Ni)(-1) h(-1). The selective formation of 1-butene can be rationally controlled by using low catalyst concentrations.

Journal Article↗

Molybdocalixarene structure control via rim deprotonation. synthesis, characterization, and crystal structures of calix[4]arene Mo(VI) monooxo complexes and calix[4]arene alkali metal/Mo(VI) dioxo complexes.

We report a series of calix[4]arene Mo(VI) dioxo complexes M2RC4MoO2 (M = alkali metal, R = H or Bu(t)) that were fully characterized by NMR, X-ray, IR, UV/vis, and elemental analysis. Molybdocalix[4]arene structures can be controlled via lower rim deprotonation, groups at para positions of calix[4]arene, and alkali metal counterions. Mono deprotonation at the lower rim leads to calix[4]arene Mo(VI) monooxo complexes RC4MoO (R = H, Bu(t), or allyl), and full deprotonation gives rise to calix[4]arene Mo(VI) dioxo complexes. Structural studies indicate that HC4 Mo(VI) dioxo complexes easily form polymeric structures via cation-pi interaction and coordination between different calixarene units. However, Bu(t)C4 Mo(VI) dioxo complexes tend to form dimers or tetramers due to steric hindrance of the tert-butyl groups at para positions in calixarene. The structures of the reduced side products A and C were determined by X-ray diffraction studies. The mechanism of RC4MoO formation from the reaction of calixarene monoanions with MoO2Cl2 appears to include the addition of a calixarene -OH group across a Mo=O bond.

Journal Article↗

Spirodienone route for the stereoselective methylene functionalization of p-tert-butylcalix[4]arene.

A new method for the regio- and stereoselective functionalization of two distal methylene groups of p-tert-butylcalixarene (1a) is described. Reaction of the meso bis(spirodienone) calixarene derivative 2a with bromine afforded the tetrabrominated product 3a derived from exo 1,4-additions of bromine to the diene subunits. A phase-transfer-catalyzed reaction of 3a with aqueous NaOH/CH2Cl2 yielded the exo bis(epoxide) calixarene derivative 4. Heating 3a in a vacuum eliminated two molecules of HBr and afforded a product (5b) that retained the C(i) symmetry of the starting material. X-ray analysis indicated that the calixarene derivative 5b possesses two exocyclic double bonds of E configuration. Calixarene 5b undergoes reaction with nucleophiles at the exocyclic double bonds, with concomitant bond shifts and expulsion of the bromine atoms. Selective trans monodeuteration of two methylene groups of 1 was achieved by reaction of 5b with NaBD4 followed by aromatization of the labeled spirodienol derivative. Reaction of 5b with RONa/ROH (R = Me, Et) afforded the methylene-substituted bis(spirodienone) derivatives 9a and 9b possessing two trans alkoxy groups. X-ray crystallography of 9b indicated that the two trans substituents are located at pseudoequatorial positions of the methylene groups. LiAlH4 reduction of the substituted bis(spirodienone) derivatives afforded calix[4]arenes incorporating trans alkoxy groups at two distal methylene positions.

Journal Article↗

Grafted metallocalixarenes as single-site surface organometallic catalysts.

Metallocalixarenes were grafted onto silica using a surface organometallic approach and shown to be active and selective catalysts for epoxidation of alkenes using organic hydroperoxides. Calixarene-Ti(IV) precursors were anchored at surface densities from 0.1 to near-monolayer coverages (0.025-0.25 calixarene nm(-2)). Several spectroscopic methods independently detected calixarene-Ti(IV) connectivity before and after epoxidation catalysis. Kinetic analyses of cyclohexene epoxidation confirmed that the active sites were anchored on the silica surface and were significantly more active than their homogeneous analogues. The steric bulk and multidentate binding of the calixarenes led to structural stability and to single-site behavior during epoxidation catalysis. Rate constants were independent of surface density for cyclohexene epoxidation with tert-butyl hydroperoxide (11.1 +/- 0.3 M(-2) s(-1)) or cumene hydroperoxide (25 +/- 2 M(-2) s(-1)). The materials and methods reported here allow the assembly of robust surface organometallic structures in which the active sites behave as isolated species, even near saturation monolayer coverages. In turn, this makes possible the rational design and synthesis of a class of heterogeneous oxide catalysts with atomic-scale precision at the active site.

Journal Article↗

Tricalixarenes and pentacalixarenes: synthesis and complexation studies.

Tricalix[4]arene 4, tricalix[5]arene 14, and pentacalix[4]arene 10 have been synthesized from O-alkylcalixarene mono- and dialdehydes by a two-step conversion to the corresponding monoethynyl ketones or diethynyl ketones followed by aryne trimerization in refluxing DMF containing a dialkylamine. The tricalixarenes 4 and 14 were converted, in turn, to calixarenes 6 and 16, which carry OH groups on the lower rim and methylenes as the bridging moieties to the benzene ring. Complexation studies with the tricalix[5]arene 16 show that it forms (a) a 1:3 complex with N,N-dimethylethylenediamine in which each calixarene unit contains a molecule of the amine, (b) a 1:1 complex with tris(aminomethyl)amine in which each calixarene unit contains one of the three arms of the guest, and (c) a 1:1 complex with C60 in which the guest presumably resides in the cavity provided by the three calixarene units acting cooperatively.

Journal Article↗

Surface enhanced vibrational (IR and Raman) spectroscopy in the design of chemosensors based on ester functionalized p-tert-butylcalix[4]arene hosts.

Surface-enhanced IR (SEIR) and Raman scattering (SERS) have been employed to study the adsorption of ester functionalized tert-butyl calix[4]arenes on Ag and Au nanostructured surfaces as well as their complexes with pyrene. The influence of adsorption and complexation with pyrene on the host calixarene structure was tested for two different calixarene molecules bearing carboethoxy groups (CH(3)CH(2)COOCH(2)-) in the low rim at positions 1,3- and 1,2,3,4-. The results obtained with SEIR were compared to those obtained with SERS, to better understand the interaction mechanism of the studied calixarenes with the metallic surfaces and the ligand as well as to investigate the structure/selectivity relationship of these two surface techniques in the analysis of recognition problems in which these ester functionalized calixarene molecules are involved.

Journal Article↗

Towards supramolecular fixation of NOX gases: encapsulated reagents for nitrosation.

The use of simple calix[4]arenes for chemical conversion of NO2/N2O4 gases is demonstrated in solution and in the solid state. Upon reacting with these gases, calixarenes 1 encapsulate nitrosonium (NO+) cations within their cavities with the formation of stable calixarene-NO+ complexes 2. These complexes act as encapsulated nitrosating reagents; cavity effects control their reactivity and selectivity. Complexes 2 were effectively used for nitrosation of secondary amides 5, including chiral derivatives. Unique size-shape selectivity was observed, allowing for exclusive nitrosation of less crowded N-Me amides 5 a-e (up to 95 % yields). Bulkier N-Alk (Alk>Me) substrates 5 did not react due to the hindered approach to the encapsulated NO+ reagents. Robust, silica gel based calixarene material 3 was prepared, which reversibly traps NO2/N2O4 with the formation of NO+-storing silica gel 4. With material 4, similar size-shape selectivity was observed for nitrosation. The N-Me-N-nitroso derivatives 6 d,e were obtained with approximately 30 % yields, while bulkier amides were nitrosated with much lower yields (<8 %). Enantiomerically pure encapsulating reagent 2 d was tested for nitrosation of racemic amide 5 t, showing modest but reproducible stereoselectivity and approximately 15 % ee. Given high affinity to NO+ species, which can be generated by a number of NOX gases, these supramolecular reagents and materials may be useful for NOX entrapment and separation in the environment and biomedical areas.

Amides↗

Allosteric tuning of the intra-cavity binding properties of a calix[6]arene through external binding to a ZnII center coordinated to amino side chains.

Molecular recognition by calix[6]arene-based receptors bearing three primary alkylamino side chain arms (1) is described. Complexation of Zn(II) ion provides the dinuclear mu-hydroxo complex 2G(OH), XRD characterization of which, together with solution studies, provided evidence of its hosting of neutral polar organic guests G. Treatment of this complex with a carboxylic acid or a sulfonamide (XH) results in the formation of mononuclear species 3G(X), one of which (X = Cl) has been characterized by XRD. A dicationic complex 3G(RNH2) is obtained upon treatment of 2G(OH) with a mixture of an alkylamine and a strong acid. Each of these Zn(II) complexes features a tetrahedral metal ion bound to the three amino arms of ligand 1 and to an exogenous ligand (either HO-, X-, or RNH2) sitting outside of the cavity. As a result, the metal ion structures the calixarene core, constraining it in a cone conformation suitable for guest hosting. The receptor properties of these compounds have been explored in detail and are compared with those of the trisammonium receptor 1G(3H+), based on the same calixarene core, as well as those of the trisimidazole-based dicationic Zn funnel complexes. This study reveals very different host properties, in spite of the common hydrophobic, pi-basic, and hydrogen-bonding acceptor properties of the calixarene cores. A harder external ligand produces a less polarized receptor that is consequently particularly sensitive to the hydrogen-bonding ability of its guest. The less electron-rich the apical ligand, and a fortiori the trisammonium host, the more sensitive the receptor to the dipole moment of the guest. All this stands in contrast with the funnel Zn complexes, in which the coordination link plays a dominant role. It is also shown that the asymmetry of an exo-coordinated enantiopure amino ligand is sensed by the guest. This supramolecular system nicely illustrates how the receptor properties of a hydrophobic cavity can be allosterically tuned by the environment.

Binding Sites↗

Complex formation between aliphatic amines and chromogenic calix[4]arene derivatives studied by FT-IR spectroscopy.

Complex formation of two calix[4]arene derivatives - containing two ethoxycarbonylmethoxy groups or a bridge including two carboxamide moieties in the coordination sphere - with aliphatic amines (n-octylamine, OA and triethylamine, TEA) were the subject of FT-IR studies. Two nitrophenyl type auxochromic moieties were also present in both of the ligands. Solvent effects were studied in chloroform, diiodomethane and dichloromethane. Presumably, in these reactions, the reactants undergo phenol-amine type interactions and, simultaneously, coordinative interaction takes place between the carbonyl group of the ligand and the protonated form of the aliphatic amine. Complex formation of calixarene 1a with n-octylamine was complete resulting in drastic changes in the FT-IR spectra. Moreover, the possibility of the formation of a new compound by the reaction between the ester type functionalities and octylamine was precluded. The expected ligand was synthesized and its spectra were compared with those of calixarene 1a. In most of the cases of calixarene 1b, the amide moiety of the carboxamide bridge does not participate in the complex formation with the exception of complexes formed in diiodomethane solution and of the 1b-TEA complex observed in dichloromethane.

Amines↗

Study of a novel cationic calix[4]arene used a selectivity modifier in capillary electrophoresis with electrochemical detection.

The use of a novel cationic calixarene, p-(quaternary ammonium) calix[4]arene, as selectivity modifier in capillary electrophoresis coupled with electrochemical detection was reported. The calixarene displayed good selectivity for the positional isomers of benzenediol and aminophenol and their successful separation was obtained under optimum conditions. The interaction mechanism between p-(quaternary ammonium) calix[4]arene and the solutes is discussed using the molecular modeling method. The detection limits by electrochemical detection for the most solutes studied here were below picogram level, which was approximately 2 orders of magnitude lower than those reported in the literature using UV detection. The results showed that electrochemical detection is especially suitable for an electrophoresis system where calixarenes are used as modifier.

Calixarenes↗

Toward mimicking viral geometry with metal-organic systems.

Icosahedral and cuboctahedral arrangements of calixarenes, a nanometer-scale, spheroidal assembly of 12 calixarene molecules, can be manipulated in a highly controlled fashion. Previously, such assemblies were observed to favor placement of the calixarenes at the vertexes of an icosahedron. A supramolecular constraint is employed in order to enforce molecular alignment and produce a cuboctahedral arrangement. The internal volume of the cuboctahedron is approximately 30% greater than that of the icosahedron. Furthermore, in stark contrast to that of the icosahedral Platonic solid, the shell of the cuboctahedral Archimedean solid is porous.

Biomimetic Materials↗

Bolaforms with fourteen galactose units: a proposed site-directed cohesion of cancer cells.

[structure: see text] The multistep synthesis of a calixarene joined to a second calixarene via a long spacer is described. Since each calixarene bears multiple galactose-based units (known to bind strongly to rat hepatoma cells), there existed the possibility of cross-linking the cancer cells into a network. The compounds did not serve this purpose, a fact potentially correctable by adjusting or rigidifying the spacer. Formation of a "cancer net" around a solid tumor remains a viable approach to retarding growth and/or inhibiting metastasis.

Animals↗