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PubMed2006

Thermodynamic calculations in the system CH4-H2O and methane hydrate phase equilibria.

Using the Gibbs function of reaction, equilibrium pressure, temperature conditions for the formation of methane clathrate hydrate have been calculated from the thermodynamic properties of phases in the system CH4-H2O. The thermodynamic model accurately reproduces the published phase-equilibria data to within +/-2 K of the observed equilibrium boundaries in the range 0.08-117 MPa and 190-307 K. The model also provides an estimate of the third-law entropy of methane hydrate at 273.15 K, 0.1 MPa of 56.2 J mol(-1) K(-1) for 1/nCH4.H2O, where n is the hydrate number. Agreement between the calculated and published phase-equilibria data is optimized when the hydrate composition is fixed and independent of the pressure and temperature for the conditions modeled.

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PubMed2006

Titration of fatty acids solubilized in cationic and anionic micelles. Calorimetry and thermodynamic modeling.

The electrostatic properties of charged surfactant micelles are investigated through titrations of fatty acid probes solubilized in the micelles. The titration process is followed by means of calorimetric measurements and by determining the pH values as a function of added base. This approach yields a complete thermodynamic description of the titration process. In particular, we find that the process is endothermic at 298 K. This is contrary to the titration of carboxylic acids in water, where DeltaH is approximately 0. To identify the main effect underlying the difference in DeltaH between titration in a micelle and water, a thermodynamic model has been developed which focuses on the transfer properties of charged and uncharged species from bulk water to the surface of a micelle and which incorporates a dielectric discontinuity at the micellar surface. The model relies on the use of the Poisson-Boltzmann equation which is solved using a finite element method. Experimental results and the model calculations imply that the dielectric discontinuity at (or near) the micellar surface plays a major role and hence must be included when analyzing the titration behavior of an acid functionality at the surface of a charged micelle.

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PubMed2006

Investigation of fundamental transport properties and thermodynamics in diglyme-salt solutions.

Ionic mobility, the thermodynamics of ionic association, and the structure of associated species are studied in solutions of diglyme containing either lithium triflate or tetrabutylammonium triflate. Infrared spectroscopic, PFG NMR, thermodynamic, and crystallographic data suggest that the solute species existing in diglyme-lithium triflate are "free" ions, contact ion pairs, and dimers. Equilibrium constants, S(o), deltaH(o), and deltaG(o) are calculated for processes occurring between these species. In particular, the equilibrium constant, corrected for nonideality using a modified Debye-Hückel expression, is calculated for the dissociation of contact ion pairs into "free" cations and anions. A second equilibrium constant for the formation of dimers from contact ion pairs is also calculated; these constants do not significantly vary with salt concentration up to about 1.3 x 10(-3) mol cm(-3). The measured temperature dependence of equilibrium constants was used to calculate deltaH(o) and deltaS(o) for the two processes. The value of deltaS(o) = -102 J mol(-1) K(-1) for the dissociation of contact ion pairs shows that the large entropy decrease due to cation solvation outweighs the entropy increase due to dissociation of a contact ion pair. Ionic mobilities are calculated in lithium triflate-diglyme solutions using conductivity data in conjunction with information about the nature and concentrations of solute species obtained from IR spectroscopy. Mobilities in tetrabutlyammonium triflate-diglyme solutions are calculated directly from conductivity data. It was concluded that the concentration dependence of the molar conductivity is due in large part to the variation of the ion mobilities with concentration.

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PubMed2006

On the nonequilibrium thermodynamics of large departures from Butler-Volmer behavior.

Large deviations from the behavior predicted by the Butler-Volmer equation of electrochemistry are accounted for using mesoscopic nonequilibrium thermodynamics. The nonequilibrium thermodynamic hypotheses are extended to include velocity space and cope with imperfect reactant transport leading to departures from Butler-Volmer behavior. This results in a modified Butler-Volmer equation in good agreement with experimental data. The distinct advantages of the method and its applicability to analyze other systems are briefly discussed.

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PubMed2006

Coverage-dependent kinetics and thermodynamics of carbon monoxide adsorption on a ternary copper catalyst derived from static adsorption microcalorimetry.

A reliable method for adsorption systems in equilibrium is established to derive coverage-dependent kinetics and thermodynamics from the volumetric data obtained during the static microcalorimetric measurement of heats of adsorption. The Wigner-Polanyi equation is applied to analyze the pressure change as a function of time during stepwise dosing of the adsorptive until thermodynamic adsorption-desorption equilibrium is established. For carbon monoxide adsorption on a hydrogen-reduced Cu/ZnO/Al2O3 catalyst, the adsorption rate constant (ka) is found to be in the range from 10(-6) to 10(-4) Pa(-1) s(-1), and the desorption rate constant (kd) from 10(-4) to 10(-2) s(-1), both increasing with fractional coverage theta. The kinetically derived equilibrium constant Ktheta is in good agreement with Ktheta obtained from the adsorption isotherm. RT ln(Kp0) and the differential heat of adsorption (qdiff) were found to decrease in parallel, reflecting a normal Temkin-type heterogeneity.

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PubMed2006

Thermodynamics, structure, and dynamics in room temperature ionic liquids: the case of 1-butyl-3-methyl imidazolium hexafluorophosphate ([bmim][PF6]).

A detailed investigation of the phase diagram of 1-butyl-3-methyl imidazolium hexafluorophosphate ([bmim][PF(6)]) is presented on the basis of a wide set of experimental data accessing thermodynamic, structural, and dynamical properties of this important room temperature ionic liquid (RTIL). The combination of quasi adiabatic, continuous calorimetry, wide angle neutron and X-ray diffraction, and quasi elastic neutron scattering allows the exploration of many novel features of this material. Thermodynamic and microscopic structural information is derived on both glassy and crystalline states and compared with results that recently appeared in the literature allowing direct information to be obtained on the existence of two crystalline phases that were not previously characterized and confirming the view that RTILs show a substantial degree of order (even in their amorphous states), which resembles the crystalline order. We highlight a strong connection between structure and dynamics, showing the existence of three temperature ranges in the glassy state across which both the spatial correlation and the dynamics change. The complex crystalline polymorphism in [bmim][PF(6)] also is investigated; we compare our findings with the corresponding findings for similar RTILs. These results provide a strong experimental basis for the exploration of the features of the phase diagram of RTILs and for the further study of longer alkyl chain salts.

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PubMed2006

The impact of the layer thickness on the thermodynamic properties of pd hydride thin film electrodes.

Recently, a lattice gas model was presented and successfully applied to simulate the absorption/desorption isotherms of various hydride-forming materials. The simulation results are expressed by parameters corresponding to several energy contributions, e.g., interaction energies. However, the use of a model system is indispensable in order to show the strength of the simulations. The palladium-hydrogen system is one of the most thoroughly described metal hydrides found in the literature and is therefore ideal for this purpose. The effects of decreasing the thickness of Pd thin films on the isotherms have been monitored experimentally and subsequently simulated. An excellent fit of the lattice gas model to the experimental data is found, and the corresponding parameters are used to describe several thermodynamic properties. It is analyzed that the contribution of H-H interaction energies to the total energy and the influence of the host lattice energy are significantly and systematically changing as a function of Pd thickness. Conclusively, it has been verified that the lattice gas model is a useful tool to analyze thermodynamic properties of hydrogen storage materials.

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PubMed2006

Theoretical thermodynamics and the nature of interactions of the quasi-binary NaCl-SnCl(2) system.

The formation of NaSnX(3) (X = halogen) influences the sodium concentration in metal halide lamps making the thermodynamics of such reactions critical for technological developments. Theoretical predictions of the structure and vibrational properties of the quasi-binary NaCl-SnCl(2) system lead to thermodynamical data determined through the third law evaluation. Ab initio enthalpy and entropy of dissociation of NaSnCl(3) also is reported. Additionally, insight into the nature of chemical bonding is provided by electron population analysis and the interaction energy decomposition scheme.

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PubMed2004

Thermodynamics of demicellization of mixed micelles composed of sodium oleate and bile salts.

Isothermal titration calorimetry (ITC) was used to determine the critical micelle concentration (cmc) and the thermodynamic parameters associated with the demicellization of sodium oleate (NaO) and mixed micelles composed of the bile salt (BS) sodium cholate (NaC) or sodium deoxycholate (NaDC), respectively, and NaO at a molar ratio of 5:2. The influence of the ionic strength (pure water and 0.1 M NaCl at pH 7.5) as well as that of the temperature (10-70 degrees C) were analyzed. For NaO, two cmc's were detected, indicating a two-step aggregation process, whereas only one cmc was observed for the two BSs. A single aggregation mechanism is also evident for the demicellization of mixed micelles (BS/NaO 5:2). Increasing the ionic strength induces the well-known decrease of the cmc. The cmc shows a minimum at room temperature. The cmc(mix) of the mixed micelles was analyzed using models assuming an ideal or nonideal mixing behavior of both detergents. The thermodynamic parameters describing the enthalpy (deltaHdemic), entropy (deltaSdemic), and Gibbs energy change (deltaGdemic), as well as the change in heat capacity (deltaCp,demic) for demicellization, were obtained from one ITC experiment. From the temperature dependence of deltaHdemic, the change of the hydrophobic surface area of the detergents from the micellar into the aqueous phase was derived. In all cases, the deltaCp,demic values are positive. In addition, the temperature dependence of the size of the formed aggregates was studied by dynamic light scattering (DLS). DLS indicated two populations of aggregates in the mixed system, small primary micelles (0.5-2 nm), and larger aggregates with a hydrodynamic radius in the range of 50-150 nm.

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PubMed2004

Thermodynamic considerations of microgel swelling behavior.

A simple but novel thermodynamic model is presented, based upon van't Hoff analysis, for the reversible swelling behavior of colloidal microgels. The swelling, as a function of temperature, of poly(N-isopropylacrylamide/N,N'-methylenebisacrylamide) as well as poly(N-isopropylacrylamide/vinylpyridine/N,N'-methylenebisacrylamide) and poly(N-isopropylacrylamide/acrylic acid/N,N'-methylenebisacrylamide) microgel dispersions in H2O and D2O has been studied by photon correlation spectroscopy (PCS). PCS data was used to obtain the hydrodynamic diameter and hence the volume of the microgels (before and after reconstitution following freeze-drying) as a function of temperature. The choice of standard reference states, for analyzing the data attained, is discussed, and the one selected is that of the volume of the microgels at 333 K in H2O. For all microgels examined the volume, at this temperature, is shown to be independent of solvent (H2O, D2O). The derived data has allowed the exploration of a novel thermodynamic approach to the study of the swelling behavior of the microgels. The constant volume, at 333 K, for each of the polymer systems constituting the microgels is suggested to be an intrinsic property of the polymers themselves.

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PubMed2005

Thermodynamic and structural properties of phospholipid langmuir monolayers on hydrosol surfaces.

Measurements of Langmuir pressure/area isotherms, rheology, grazing incidence X-ray diffraction (GIXD), and grazing incidence diffuse X-ray scattering out of the specular plane (GIXOS) have been used to investigate the influence of a hydrosol containing charged mineral nanoparticles on the thermodynamic and structural properties of a DPPC monolayer. The mineral adsorption layer that is formed via electrostatic interaction underneath the lipid layer alters the thermodynamic properties of the phospholipid monolayer in terms of maximal achievable compression, compressibility, and phase behavior. Modifications appear in the latter case as a coolinglike effect. Rheology measurements of the bulk viscoelastic properties revealed a stabilizing effect of the transient bulk network on the surfactant layer. The lipid chain lattice is found to be reorganized and adapted to the internal atomic structure of the mineral particles. A model for the superposition of Bragg rods from the lipid chains and the minerals is applied to separate these scattering contributions. In the vicinity of the mineral particles, the (2) reflection for DPPC on a liquid substrate was found, indicating strongly suppressed fluctuations at the surface. An estimation of the Debye-Waller factor associated with the lipid layer organization is used to quantify the damping of fluctuations within the lipid matrix due to the rigidifying and stabilizing effect of the mineral particles.

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PubMed2006

Surface thermodynamics reveals selective structural information storage capacity of c-Fos-phospholipid interactions.

The surface properties of c-Fos, a regulator of normal and pathologic cell growth and a modulator of phospholipid metabolism, suggest that it has the potential to transduce information through molecular reorganization, placing the nature of its interaction with phospholipids at the basis of its possible effects at the membrane level. Previous studies established that c-Fos induces condensation and depolarization of PIP2 films and expansion and hyperpolarization of PC. We have now explored more in depth the thermodynamic aspects of these lipid-protein interactions, finding that the mixtures have associated hysteresis. The analysis of the excess thermodynamic functions provides evidence of entropic-enthalpic compensations that result in a favorable enthalpic contribution derived from the interaction of c-Fos with PIP2, which exceeds the unfavorable configurational entropy. On the contrary, favorable entropy terms dominate the interaction of c-Fos with PC over the unfavorable enthalpy. The free energy of hysteresis is stored as excess free energy. A shift in molecular packing-dependent surface reorganization, compared to that of ideally mixed films, indicates a gain in information content at the lipid-protein interface in mixed films of c-Fos with PIP2 but not with PC. It is postulated that the free energy stored in these mixtures could act as a bidirectional structural information transducer for dynamic compression-expansion processes occurring on the membrane surface.

Animals↗
PubMed2000

Conformational study of the intramolecular diels-alder reaction of a pentadienyl acrylate. Theoretical evaluation of kinetic and thermodynamic control

Acrylate 4, prepared from diacetylrhamnal, underwent intramolecular Diels-Alder cycloaddition to give the thermodynamically disfavored trans-fused gamma-lactone 15 as the major product, along with two stereoisomeric cycloadducts. A computational analysis of each of the four transition states arising from 4 and the corresponding cycloadducts permits an understanding of the contrasting requirements for kinetic versus thermodynamic control of the reaction.

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PubMed2000

A thermodynamic assessment of the potential synthesis of condensed hydrocarbons during cooling and dilution of volcanic gases.

The possibility for abiotic synthesis of condensed hydrocarbons in cooling/diluting terrestrial volcanic gases has been evaluated on the basis of the consideration of metastable chemical equilibria involving gaseous CO, CO2, H2 and H2O. The stabilities of n-alkanes and polycyclic aromatic hydrocarbons (PAHS) have been evaluated for several typical volcanic gas compositions under various conditions for cooling/diluting of quenched volcanic gas. The modeling shows that n-alkanes and PAHs have a thermodynamic potential to form metastably from H2 and CO below approximately 250 degrees C within the stability field of graphite. Despite the predominance of CO2 in volcanic gases, synthesis of hydrocarbons from CO2 and H2 is less favored energetically than from CO and H2. Both low temperature and a high H/C atomic ratio in volcanic gas generally favor stability of hydrocarbons with higher H/C ratios. PAHs are thermodynamically stable at temperatures approximately 10 degrees -50 degrees C higher than large n-alkanes; however, at lower temperatures, PAHs and n-alkanes have similar stabilities and are likely to form metastable mixtures. Both the energetic drive to form hydrocarbons and possible temperatures of formation increase as the oxidation state (fO2) of the volcanic gases decreases and as the cooling/dilution ratios of volcanic gases increase. Synthesis of hydrocarbons is energetically more likely in cooling trapped gases than in ashcloud eruptive columns. Mechanisms for hydrocarbon formation may include Fischer-Tropsch-type synthesis catalyzed by magnetite from solid volcanic products. On the early Earth, Mars, and Jupiter's satellite Europa, several factors would have provided more favorable conditions for hydrocarbon synthesis in volcanic gases than under current terrestrial conditions and might have contributed to the production of organic compounds required for the emergence of life.

Alkanes↗
PubMed2000

A thermodynamic explanation for black smoker temperatures

There is a remarkable difference between the maximum temperature of black smoker effluent (350 degrees C-400 degrees C) and the temperature of the solidifying magma which heats it (approximately 1,200 degrees C). It has been suspected for some time that the nonlinear thermodynamic properties of water might be responsible for this discrepancy. Here, we translate this hypothesis into a physical model, by examining the internal temperature structure of convection cells in a porous medium. We demonstrate that, at pressures appropriate to seafloor crust, plumes of pure water form naturally at approximately 400 degrees C for any heat source with temperature greater than approximately 500 degrees C. Higher temperatures are confined to a boundary layer at the base of the convection cell, where the flow is horizontal. The phenomenon is explained analytically using the thermodynamic properties of water, and is illustrated by numerical simulations. Our model predicts the existence of the high-temperature 'reaction zone' found in ophiolites and suggests that vent temperatures will remain steady as magma chambers solidify and cool.

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PubMed2005

Orientational order of the water molecules at the vicinity of the water-benzene interface in a broad range of thermodynamic states, as seen from Monte Carlo simulations.

Monte Carlo simulation of the water/benzene liquid-liquid interfacial system has been performed at six different thermodynamic state points, ranging from ambient conditions up to the vicinity of the critical point of water. The system has been found to consist of two immiscible liquid phases at every state point studied. The orientational preferences of the interfacial water molecules have been analysed in detail using the simulated configurations. The results obtained at ambient conditions are in agreement with previous results on various different water/apolar interfaces. Thus, interfacial water molecules have been found to have dual orientational preferences: the molecules located nearest to the organic phase prefer to stay perpendicular to the interface, pointing flatly toward the apolar phase by their dipole vectors, whereas the waters located somewhat farther from the organic phase prefer the parallel alignment with the interface. The observed orientational preferences are found to be rather stable with changing thermodynamic conditions: although the increase of the temperature has led, due to the increasing thermal motion of the molecules, to a gradual weakening of the orientational preferences, both preferences are found to exist up to at least 450 K, and found to be completely washed out at 575 K only. The pressure has not been found to influence the orientation of the water molecules noticeably.

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PubMed2005

Kinetic and thermodynamic stereocontrol in the atroposelective formation of sulfoxides by oxidation of 2-sulfanyl-1-naphthamides.

Atropisomeric aromatic amides bearing 2-sulfanyl groups are oxidised by m-CPBA to the corresponding sulfoxides apparently with very high diastereoselectivity. NMR studies and oxidations of chiral benzamides however indicate that the kinetic selectivity of the oxidation is in fact relatively poor, and that the final diastereoisomeric ratio (typically >99:1) is under thermodynamic control, with relatively unhindered Ar-CO rotation readily converting the less stable to the more stable product diastereoisomer. Molecular mechanics indicates that the thermodynamic diastereoselectivity results principally from electrostatic repulsion between the C=O and S-O dipoles.

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PubMed2006

Consequences of chain networks on thermodynamic, dielectric and structural properties for liquid water.

A vast array of experimental data on water provides a global view of the liquid that implicates its tetrahedral hydrogen-bonding network as the unifying molecular connection to its observed structural, thermodynamic, and dielectric property trends with temperature. Recently the classification of water as a tetrahedral liquid has been challenged based on X-ray absorption (XAS) experiments on liquid water (Ph. Wernet et al., Science, 2004, 304, 995), which have been interpreted to show a hydrogen-bonding network that replaces tetrahedral structure with chains or large rings of water molecules. We examine the consequences of tetrahedral vs. chain networks using three different modified water models that exhibit a local hydrogen bonding environment of two hydrogen bonds (2HB) and therefore networks of chains. Using these very differently parameterized models we evaluate their bulk densities, enthalpies of vaporization, heat capacities, isothermal compressibilities, thermal expansion coefficients, and dielectric constants, over the temperature range of 235-323 K. We also evaluate the entropy of the 2HB models at room temperature and whether such models support an ice I(h) structure. All show poor agreement with experimentally measured thermodynamic and dielectric properties over the same temperature range, and behave similarly in most respects to normal liquids.

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