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PubMed2003

Phase reconstruction from intensity measurements in linear systems.

The phase of a signal at a plane is reconstructed from the intensity profiles at two close parallel screens connected by a small abcd canonical transform; this applies to propagation along harmonic and repulsive fibers and in free media. We analyze the relationship between the local spatial frequency (the signal phase derivative) and the derivative of the squared modulus of the signal under a one-parameter canonical transform with respect to the parameter. We thus generalize to all linear systems the results that have been obtained separately for Fresnel and fractional Fourier transforms.

Journal Article↗
PubMed2004

First- and second-order information in natural images: a filter-based approach to image statistics.

Previous analyses of natural image statistics have dealt mainly with their Fourier power spectra. Here we explore image statistics by examining responses to biologically motivated filters that are spatially localized and respond to first-order (luminance-defined) and second-order (contrast- or texture-defined) characteristics. We compare the distribution of natural image responses across filter parameters for first- and second-order information. We find that second-order information in natural scenes shows the same self-similarity previously described for first-order information but has substantially less orientational anisotropy. The magnitudes of the two kinds of information, as well as their mutual unsigned correlation, are much stronger for particular combinations of filter parameters in natural images but not in unstructured fractal images having the same power spectra.

Algorithms↗
PubMed2003

Far-field photothermal microscopy beyond the diffraction limit.

The principles of laser photothermal (PT) imaging beyond the diffraction limit are discussed. Algorithms for obtaining information on the sizes and the shapes of nanotargets are analyzed. Spectral PT lifetime imaging is suggested to provide spatial localization of nanotargets overlapping inside the diffraction volume.

Algorithms↗
PubMed2000

Small nodules detected on chest radiography: does size predict calcification?

STUDY OBJECTIVES: To determine whether the likelihood of lung nodule calcification can be predicted from nodule size as measured on a chest radiograph (CXR). DESIGN: Retrospective review of CXRs of patients with lung nodules < or =1 cm in size detected on CT scanning. CT images were used to identify calcifications and to provide spatial localization for readers to visualize nodules on a CXR and to measure their size. A subset of these nodules then was reexamined by different readers who did not view the CT scans SETTING: Two university hospitals (Albuquerque, NM; Dallas, TX) and a US Air Force/Veterans Administration medical center (Albuquerque, NM). PATIENTS: Two hundred thirty-six nodules in 185 patients RESULTS: One half of the nodules (118) seen on CT scans could not be located on CXR, of which 8 (7%) were calcified. The prevalence of calcifications in the other 118 nodules visualized on CXRs was much higher (71 of 118 nodules [60%]; p<0.005). Among the nodules visualized on CXRs, those < 7 mm in diameter (44 of 57 nodules [77%]) were more likely to be calcified than those > or = 7 mm in diameter (27 of 61 nodules [44%]; p<0.005). Radiographs of 42 of the smallest nodules visualized on CXRs by the initial readers later were examined prospectively by different readers who did not have access to the CT images. Thirty of 33 of the calcified nodules (91%) but only 3 of 9 of the noncalcified nodules (33%) were detected (p<0.005). These readers also recorded 40 additional small nodules that were not seen on CT scans, which were considered to be false-positives. CONCLUSIONS: Nodules detected on CXRs that measure <7 mm in size are likely to be calcified or to represent a false-positive finding.

Calcinosis↗
PubMed2003

Signal transduction events regulating integrin function and T cell migration: new functions and complexity.

Integrin receptors facilitate T cell function by mediating adhesive events critical for T cell trafficking and recognition of foreign antigen, including interactions with vascular endothelium, extracellular matrix components, and antigen-presenting cells. Consequently, the functional activity of integrin receptors is acutely regulated by various intracellular signals delivered by other cell surface receptors, resulting in rapid changes in T cell adhesion and migration. This review highlights recent insights into our understanding of the signaling events by which the CD3/T cell receptor complex and chemokine receptors regulate integrin function and T cell migration. These studies highlight novel functions for several signaling molecules, including the tyrosine kinases Itk and ZAP-70, and the adapter protein SLAP-130/Fyb. In addition, analysis of the regulation of integrin function and chemokine-mediated migration has highlighted the critical role that spatial localization of signaling molecules plays in signal transduction, and the importance of the actin cytoskeleton in T cell function.

Cell Adhesion↗
PubMed2004

A neural representation of pitch salience in nonprimary human auditory cortex revealed with functional magnetic resonance imaging.

Pitch, one of the primary auditory percepts, is related to the temporal regularity or periodicity of a sound. Previous functional brain imaging work in humans has shown that the level of population neural activity in centers throughout the auditory system is related to the temporal regularity of a sound, suggesting a possible relationship to pitch. In the current study, functional magnetic resonance imaging was used to measure activation in response to harmonic tone complexes whose temporal regularity was identical, but whose pitch salience (or perceptual pitch strength) differed, across conditions. Cochlear nucleus, inferior colliculus, and primary auditory cortex did not show significant differences in activation level between conditions. Instead, a correlate of pitch salience was found in the neural activity levels of a small, spatially localized region of nonprimary auditory cortex, overlapping the anterolateral end of Heschl's gyrus. The present data contribute to converging evidence that anterior areas of nonprimary auditory cortex play an important role in processing pitch.

Adult↗
PubMed2004

DRAGON: a member of the repulsive guidance molecule-related family of neuronal- and muscle-expressed membrane proteins is regulated by DRG11 and has neuronal adhesive properties.

DRG11, a transcription factor expressed in embryonic dorsal root ganglion (DRG) and dorsal horn neurons, has a role in the development of sensory circuits. We have used a genomic binding strategy to screen for the promoter region of genes regulated by DRG11. One gene with a promoter region binding to the DNA binding domain of DRG11 encodes a novel membrane-associated [glycosyl-phosphatidylinositol (GPI)-anchored] protein that we call DRAGON. DRAGON expression is transcriptionally regulated by DRG11, and it is coexpressed with DRG11 in embryonic DRG and spinal cord. DRAGON expression in these areas is reduced in DRG11 null mutants. DRAGON is expressed, however, in the neural tube before DRG11, and unlike DRG11 it is expressed in the brain and therefore must be regulated by other transcriptional regulatory elements. DRAGON shares high sequence homology with two other GPI-anchored membrane proteins: the mouse ortholog of chick repulsive guidance molecule (mRGM), which is expressed in the mouse nervous system in areas complementary to DRAGON, and DRAGON-like muscle (DL-M), the expression of which is restricted to skeletal and cardiac muscle. A comparative genomic analysis indicates that the family of RGM-related genes--mRGM, DRAGON, and DL-M--are highly conserved among mammals, zebrafish, chick, and Caenorhabditis elegans but not Drosophila. DRAGON, RGM, and DL-M mRNA expression in the zebrafish embryo is similar to that in the mouse. Neuronal cell adhesion assays indicate that DRAGON promotes and mRGM reduces adhesion of mouse DRG neurons. We show that DRAGON interacts with itself homophilically. The dynamic expression, ordered spatial localization, and adhesive properties of the RGM-related family of membrane-associated proteins are compatible with specific roles in development.

Amino Acid Sequence↗
PubMed2005

G-protein-coupled enzyme cascades have intrinsic properties that improve signal localization and fidelity.

G-protein-coupled enzyme cascades are used by eukaryotic cells to detect external signals and transduce them into intracellular messages that contain biological information relevant to the cell's function. Since G-protein-coupled receptors that are designed to detect different kinds of external signals can generate the same kind of intracellular response, effective signaling requires that there are mechanisms to increase signal specificity and fidelity. Here we examine the kinetic equations for the initial three stages in a generic G-protein-coupled cascade and show that the physical properties of the transduction pathway result in two intrinsic features that benefit signaling. 1), The response to a single activated receptor is naturally confined to a localized spatial domain, which could improve signal specificity by reducing cross talk. 2), The peak of the response generated by such a signaling domain is limited. This saturation effect reduces trial-to-trial variability and increases signaling fidelity by limiting the response to receptors that remain active for longer than average. We suggest that this mechanism for reducing response fluctuations may be a contributing factor in making the single photon responses of vertebrate retinal rods so remarkably reproducible.

Animals↗
PubMed2005

The selective prostaglandin EP4 agonist, APS-999 Na, induces follicular growth and maturation in the rat ovary.

OBJECTIVE: It is known that prostaglandin E2 (PGE2) plays a crucial role in the ovulation process. PGE2 mediates its actions through four subtypes of receptors designated EP1-EP4. However, the nature of the ovulation-promoting effect of PGE2 is not well understood. We have carried out this in vivo research utilizing a new selective EP4 receptor agonist (EP4A; APS-999 Na) to investigate its role in folliculogenesis aiming at more understanding of the biological mechanism of action of PGE2. DESIGN AND METHODS: Immature, 22 day old Wistar rats were used. Animals were injected once either with placebo, 20 IU pregnant mare serum gonadotrophin (PMSG), or EP4A (10, 20 or 50 microg). In other experiments, EP4A was injected in PMSG stimulated rats. Ovarian follicle growth and development was assessed through total count and size measurement of ovulatory follicles in whole ovaries of the investigated groups. Utilizing immunohistochemistry, the spatial localization of the EP4 receptor in immature rat ovary and IL-8 pattern of expression after EP4A injection was also investigated. RESULTS: Our study showed that injection of EP4A resulted in increased follicle growth and development compared with the control, in a time- and dose-dependent manner. The highest values for follicle count and size were observed 12 and 24 h after EP4A injection. EP4A induced follicle growth with morphological characteristics similar to that induced by the standard PMSG. Most dense immune staining for EP4 receptor was noticed in proliferating granulosa cells of the secondary follicles while those of the primordial and primary follicles were not stained. EP4A injection induced the expression of IL-8 in the follicles. CONCLUSIONS: Our study revealed that: (i) the localization of EP4 receptor in the ovary implies a role in follicle growth, (ii) PGE2 induced ovarian follicle growth and development is mediated at least in part through the EP4 receptor, (iii) the action of EP4A is mediated through IL-8 up regulation and (iv) the new EP4A could be a promising reagent for various systems used to induce follicle maturation in clinical or agricultural fields. This knowledge may provide useful targets for manipulation of infertility.

Animals↗
PubMed1991

Male influence on oestrous cycles in female woolly opossum (Caluromys philander).

Plasma progesterone concentrations and the occurrence of oestrous cycles were studied in isolated woolly opossums subsequently subjected to male influences during a 40-day period. Pairing (N = 48) or exposure to male urine (N = 15) resulted in all females exhibiting oestrous during the stimulation phase, providing evidence that the activation of ovarian activity in the woolly opossum involves pheromonal cues from males. The latency of occurrence of oestrous in stimulated females depended upon their sexual state before male stimulation. In anoestrous females, the mean latency was 20.7 +/- 0.9 days (N = 35), a value which agrees with the duration of the follicular phase. In females which first entered oestrous before male stimulation, the latency of induced oestrous was inversely correlated to the date of occurrence of the previous oestrous. The inter-oestrous interval was normal (38.1 +/- 1 days, N = 5) when females were in oestrous at the beginning of male stimulation. In contrast, the inter-oestrous interval was significantly shortened (28.7 +/- 2 days, N = 7) or lengthened (51.1 +/- 1.7 days, N = 16) depending on whether females were in the luteal or follicular phases at the beginning of male stimulation. During pairing several females became pregnant and gave birth 24 +/- 0.9 days (N = 13) after copulation. In the woolly opossum, the response to male influences involves mechanisms similar to those observed in eutherians and results in enhancement and synchronization of oestrous cycles in females. Pheromonal interactions could play an important role in synchronizing oestrous cycles in wild females during the dry season, a period when animals regroup to feed on spatially localized food resources.

Animals↗
PubMed2006

In vivo selection of phage for the optical imaging of PC-3 human prostate carcinoma in mice.

There is an increasing medical need to detect and spatially localize early and aggressive forms of prostate cancer. Affinity ligands derived from bacteriophage (phage) library screens can be developed to molecularly target prostate cancer with fluorochromes for optical imaging. Toward this goal, we used in vivo phage display and a newly described micropanning assay to select for phage that extravasate and bind human PC-3 prostate carcinoma xenografts in severe combined immune deficiency mice. One resulting phage clone (G1) displaying the peptide sequence IAGLATPGWSHWLAL was fluorescently labeled with the near-infrared fluorophore AlexaFluor 680 and was evaluated both in vitro and in vivo for its ability to bind and target PC-3 prostate carcinomas. The fluorescently labeled phage clone (G1) had a tumor-to-muscle ratio of approximately 30 in experiments. In addition, prostate tumors (PC-3) were readily detectable by optical-imaging methods. These results show proof of principle that disease-specific library-derived fluorescent probes can be rapidly developed for use in the early detection of cancers by optical means.

Animals↗
PubMed2001

Spatial dispersion of adult mosquitoes (Diptera: Culicidae) in a sylvatic focus of Venezuelan equine encephalitis virus.

We studied the spatial localization of mosquitoes in sylvatic focus of Venezuelan equine encephalitis virus in western Venezuela to identify mosquito species potentially involved in the hypothesized transport of viruses out of enzootic foci. The following criteria were used to identify species with potential for virus export: (1) common in the forest and surrounding area, (2) feeding on a wide range of vertebrates; (3) long dispersal capabilities, and (4) established vectorial competence for enzootic or epizootic VEE viruses. CDC traps baited with light/CO2 were operated for four and 12-h intervals to collect mosquitoes at four stations along two forest/open area transects from September to November 1997. We collected 60,444 mosquitoes belonging to 11 genera and 34 species. The most common species were Aedes serratus (Theobald), Ae. scapularis (Rondani), Ae. fulvus (Wiedmann), Culex nigripalus Theobald, Cx, (Culex) "sp", Cx. mollis Dyar & Knab, Cx. spissipes (Theobald), Cx. pedroi Sirivanakarn and Belkin, Psorophora ferox (Humboldt), Ps. albipes (Theobald), and Ps. cingulata (F.). Very few mosquitoes were captured during the (day in the open area outside the forest, suggesting that any virus export from the forest may occur at night. The following mosquitoes seemed to be mostly restricted to the forest habitat: Ae. serratus, Ps. ferox, Ps. albipes, sabethines, Cx. spissipes, Cx. pedroi, Cx. dunni Dyar, and Ae. fulvus. The main species implicated its potential virus export were Cx. nigripalpus, Ae. scapularis, and Mansonia titillans (Walker).

Aedes↗
PubMed2006

A comparative evaluation of radiation-induced DNA damage using real-time PCR: influence of base composition.

To study the radiosensitivity of DNA segments at the open reading frame (gene) level, real-time PCR was used to analyze DNA damages induced by ionizing radiation. After irradiation (1, 3 and 5 kGy) of genomic DNA purified from Salmonella typhimurium, real-time PCR based on SYBR Green fluorescence and melting temperature was performed using various primer sets targeting the rfbJ, rfaJ, rfaB, hilD, ssrB, pipB, sopD, pduQ, eutG, oadB, ccmB and ccmA genes. The ccmA and ccmB genes, which existed as two copies on the chromosome and had a high GC content ( approximately 70%), showed much lower radiosensitivities than the other genes tested, particularly at 5 kGy; this distinctive feature was seen only when the genes were located on the chromosome, regardless of copy number. Our results reinforce the concept that gene sensitivity to ionizing radiation depends on the base composition and/or the spatial localization of the gene on the chromosome.

Base Composition↗
PubMed1998

Lateral difference in the reproduction of arm positioning movement: an examination of the hypothesis on the levels of psychological processes.

The purpose of this study was to determine whether the hypothesis on the levels of psychological processes (Hatta, 1977, 1978) accounts for lateral differences in arm positioning movement (a spatial localization task). Fifteen right-handed male subjects were asked to perform a constrained criterion movement, 12 cm in length, with the left or right arm. Then, after a 10-sec retention interval, they were asked to perform the movement with the same arm, estimating lengths of 6, 12 or 24 cm. Different levels of psychological processes were assumed to be involved in estimating these various movement lengths--half, the same, or double that of the original. All possible combinations of the arm (left/right) and three movement length were tested. The CE scores were lower (more accurate) for the left arm (half; 1.5 +/- 8.1 mm, same; 4.3 +/- 6.2mm, double; 5.9 +/- 20.3 mm) than those for the right arm (half; 5.9 +/- 7.6 mm, same; 10.6 +/- 10.6 mm, double; 11.8 +/- 23.6 mm) in all conditions, indicating a lateral difference (the right hemisphere dominance) in arm positioning tasks. This typical lateral difference, which displayed no significant difference among conditions, is supposed to be mediated by complex or high-level psychological processes. These psychological processes are required by the subjects in the estimation of the various movement lengths. This study suggests that the level of psychological processes is a crucial factor in the manifestation of lateral differences in the performance of arm positioning movements.

Adult↗
PubMed2025

SARS-CoV-2 infection and vaccination elicit distinct pharyngeal mucosal B cell responses in children.

Mucosal immunity is an important correlate of protection against respiratory infections such as SARS-CoV-2. Comparing B cell responses in the upper respiratory tract following vaccination and infection may offer unique insights into mucosal immunity. Here, we characterized antigen-specific B cells in the tonsils, adenoids, and peripheral blood of children who had been infected with SARS-CoV-2 or vaccinated with SARS-CoV-2 mRNA vaccines. SARS-CoV-2-specific switched memory B cells (BSM) and germinal center B cells were found in the blood and pharyngeal lymphoid tissues after vaccination or infection. However, infection generated a higher proportion of IgA+ BSM and CXCR3+CD21+ BSM, which showed distinct spatial localization, greater clonal expansion and increased propensity for plasma cell differentiation compared to their CXCR3- counterparts, accompanied by persistent activation of innate and T follicular helper cells in the tissues. Our data provide evidence for tissue-specific B cell memory after either SARS-CoV-2 vaccination or infection, but with distinct characteristics that can influence the quality, durability, and localization of immunity.

Journal Article↗
PubMed1987

The utility of MR in planning the radiation therapy of oligodendroglioma.

Newer methods of radiation therapy for treating oligodendroglioma after surgical resection have produced promising results using high doses of radiation. However, these doses are close to those that cause necrosis of normal brain, making the accurate spatial localization of tissue at risk for containing tumor cells more important. Because MR imaging is superior to CT in detecting some types of intracranial disease, nine patients with oligodendroglioma were studied with both MR and CT. Results were compared with surgical findings. In six cases, MR identified some tumor volume found during surgery that was not detected by CT. In addition, the interface between abnormality (tumor plus edema) and normality was depicted much more clearly by MR than by CT in most cases. Such superior depiction of the margins of abnormality is important for radiation therapy planning because of the known tendency of oligodendroglioma to infiltrate adjacent edema, making all areas of abnormality potential tumor-bearing tissue. Finally, MR showed normal brain tissue in areas considered suspicious by CT, because they were not well seen on CT in several patients. In these cases of low-grade oligodendroglioma, MR was believed to be superior to CT in providing information needed for radiation therapy planning because of its ability to distinguish tumor and adjacent edema (considered tissue at risk for containing microscopic tumor) from contiguous normal brain.

Adult↗
PubMed1988

MR imaging of avascular necrosis of the femoral head: value of small-field-of-view sagittal surface-coil images.

We compared coronal, large-field-of-view, body-coil MR images with sagittal, small-field-of-view, surface-coil images of 30 hips for their sensitivities in establishing the diagnosis of avascular necrosis; spatially localizing the avascular necrosis; and detecting joint-space narrowing, femoral head collapse, articular cartilage fracture, and joint fluid. We also compared the two separate plane/coil combinations for detection of the "double-line" sign (high signal inside a band of low signal, believed to be characteristic for avascular necrosis) and intertrochanteric conversion of hematopoietic marrow to fatty marrow. Coronal, large-field-of-view, body-coil images provided an adequate screening examination for the presence of avascular necrosis (sensitivity of 94%) and were preferred in all cases for mediolateral localization of focal abnormality. They were also better for assessing joint fluid and detecting fatty conversion of marrow. Sagittal, small-field-of-view, surface-coil images were preferred for anteroposterior localization in all cases and for superoinferior localization of focal abnormality in 15 of 18 cases. They detected additional cases of joint-space narrowing, articular cartilage fracture, and the double-line sign missed by coronal, body-coil images. Sagittal, small-field-of-view, surface-coil images are a valuable adjunct to MR evaluation of femoral avascular necrosis because they provide additional information that may be useful for planning surgical therapy.

Adult↗
PubMed1991

Proton MR spectroscopy in multiple sclerosis: value in establishing diagnosis, monitoring progression, and evaluating therapy.

MR imaging is currently the technique of choice for evaluating brain lesions in patients with multiple sclerosis (MS). In addition to MR imaging, proton MR spectroscopy has shown potential in diagnosing MS and monitoring the progression of treatment. Spatially localized proton spectroscopy has been used to evaluate changes in choline, creatine, N-acetyl aspartate (NAA), lipids, and lactate in MS patients and in animal models of MS. The main spectroscopic findings are a decrease in the NAA:creatine ratio and an increase in the choline:creatine ratio in brain regions that include plaques defined by MR imaging. Proton MR spectroscopy along with MR imaging may be helpful in distinguishing those early lesions that might respond to therapy from late irreversible lesions. Preliminary evidence suggests that although the proton spectra acquired from patients with various brain diseases are similar (high choline, low NAA), there are differences in other resonances (lipids, lactate, glutamate, inositol) that could potentially help in diagnosing MS. Changes in proton metabolites potentially can be used to differentiate between the different stages of the MS lesion (hyperacute and edematous lesions, demyelinated lesions, and subacute to chronic plaques). It is hypothesized that successful treatment of demyelination and neuronal damage will be accompanied by changes in the proton spectrum (high choline:creatine ratio will lower to normal values and low NAA:creatine values will rise to normal values).

Animals↗