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Electrostatics of a peptide at a membrane/water interface. The pH dependence of melittin association with lipid vesicles.

The association of the peptide melittin with small unilamellar DMPC vesicles was studied as a function of pH. The results are discussed quantitatively assuming a water-membrane partition equilibrium. Electrostatic surface charging is taken into account as more and more of the strongly basic peptide accumulates at the bilayer/water interface. The data could be well described in terms of a Gouy-Chapman approach involving an effective interfacial charge well below the actual physical charge carried by the individual peptide molecules. The partition coefficient turned out to be pH invariant, so that one can exclude deprotonation reactions upon insertion of the peptide into the bilayer. The effective interfacial charge per associated melittin molecule decreased over a broad range of pH (pH 7 to pH above 10). Contributions of the free amino terminus and of the arginine residues could be determined by comparing with results obtained using modified melittin (N-terminally formylated and fully acetylated). The data suggest approximately equal fractional contributions of the amino terminus and the three lysines to the effective interfacial charge. The two arginines contribute less. Thus, they may be located farther away from the interface or be closely associated with counter-ions. The analysis is extended to the effect of different ionic strengths.

Bee Venoms↗

Electrostatic interaction of poly(L-lysine) with dipalmitoylphosphatidic acid studied by X-ray diffraction.

Structure of dipalmitoylphosphatidic acid (DPPA) bilayers in the presence of poly(L-lysine) is proposed from the results of X-ray diffraction obtained by a storage phosphor detector with a high resolution called an imaging plate. The small-angle X-ray diffraction pattern exhibits that DPPA/poly(L-lysine) complex forms a highly ordered multilamellar structure. The electron density profile of the DPPA/poly(L-lysine) complex draws that only one poly(L-lysine) layer is intercalated between the neighboring DPPA bilayers. The wide-angle X-ray diffraction pattern suggests that the presence of poly(L-lysine) hardly affects the nature of hydrocarbon chain packing in the DPPA bilayers. The X-ray reflection from the DPPA/poly(L-lysine) complex indicates that the poly(L-lysine) molecules adopt a beta-sheet conformation on the surface of the DPPA bilayers. The both surface areas occupied by a headgroup of the DPPA and by a lysine residue in poly(L-lysine) are estimated from the observed spacings. The number ratio of lysine residues to DPPA headgroups per unit area is greater than unity. Therefore, one DPPA headgroup interacts with more than one lysine residue electrostatically, i.e., the electric charge distributions in both the surface of a DPPA bilayer and the poly(L-lysine) beta-sheet are incommensurate.

Electrons↗

Electrostatics and reduction of dimensionality produce apparent cooperativity when basic peptides bind to acidic lipids in membranes.

The binding of pentalysine to phospholipid vesicles depends in a sigmoidal manner on the mole fraction of acidic lipid in the vesicles. A simple analysis demonstrates that this apparent cooperativity is probably due to both the reduction of dimensionality that occurs when the first basic residue binds to an acidic lipid in the membrane and the Boltzmann accumulation of the peptide in the electrostatic diffuse double layer produced by the charged lipids.

Electrochemistry↗

A screened electrostatic potential model of hydration for conformational analysis of biomolecules.

A screened electrostatic potential model of hydration which could avoid the time consuming Monte-Carlo procedures is derived from the study of the dielectric effect of a water molecule in the vicinity of two charges. It is shown that the molecular dielectric constant depends on the distance, sizes and signs of the interacting charges. The model is used to evaluate the hydration energy of the tetrapeptide (TYR-GLY-GLY-PHE) conformations. Results are in good agreement with Monte-Carlo calculations.

Mathematics↗

Electron transfer between liposomal cytochrome c1 and cytochrome c: catalytic implications of electrostatic potentials.

Kinetics measurements of the electron transfer between ferricytochrome c and liposomal ferrocytochrome c1 (with and without the hinge protein) were performed. The observed rate constants(kobs) of electron transfer between liposomal ferrocytochrome c1 and ferricytochrome c at different ionic strengths were measured in cacodylate buffer, pH 7.4, at 2 C. The effect of ionic strength on the rate constant(kobs) of electron transfer between liposomal cytochrome c1 and cytochrome c is far greater than that in the solution kinetics (Kim, C.H., Balny, C. and King, T.E. (1987) J. Biol. Chem. 262, 8103-8108). The result demonstrates that the membrane bound cytochrome c1 creates a polyelectrolytic microenvironment which appears to be involved in the control of electron transfer and can be modulated by the ionic strength. The involvement of electrostatic potentials in the electron transfer between the membrane bound cytochrome c1 and cytochrome c is discussed in accord with the experimental results and a polyelectrolyte theory.

Cytochrome c Group↗

Interaction of the calcium antagonist fantofarone with phospholipids: electrostatic effects.

The binding of fantofarone, a novel calcium channel antagonist, to cytoplasmic membranes and lipid vesicles has been studied by means of its fluorescence. The binding characteristics (dissociation constant Kd and total number of binding sites Bmax) were determined using saturation isotherms. In brain synaptic and cardiac sarcolemmal membranes, fantofarone binds to a single site with a Kd value of approximately 1.4 x 10(-6) M and a Bmax value of approximately 13 fantofarone molecules bound per 100 lipid molecules. Using vesicles made from egg phosphatidylcholine (PC), fantofarone was shown to possess a Kd approximately 7.5 x 10(-6) M and a Bmax approximately 15. When other classes of naturally-found lipids were incorporated into PC vesicles, a decrease in Kd with no modification in Bmax was observed for all acidic lipids studied. The decrease in Kd was inhibited by sodium and calcium. None of the experimental conditions modified the spectral properties or lifetimes of fantofarone. We conclude that an electrostatic interaction between fantofarone and negatively charged lipids takes place at the surface of the membrane and this interaction explains the decreased Kd value (increase in affinity) observed in cytoplasmic membranes.

Animals↗

Enhanced structural information on oligosaccharides by scan of linked magnetic and electrostatic fields (B/E) and neutral gas collision fast-atom-bombardment mass spectrometry (FABMS).

Homo- and hetero-oligosaccharides 1-27, composed of hexopyranose, deoxyhexopyranose, deoxyfluorohexopyranose, and 2-acetamido-2-deoxyhexopyranose units, have been examined by fast-atom-bombardment mass spectrometry. Scans by linked magnetic and electrostatic (B/E) fields of quasi-molecular [M+H] ions, or scans combined with helium collision, gave rise to structurally significant ions. The information thus obtained aids significantly in the sequence analysis of oligosaccharides without derivatization.

Carbohydrate Sequence↗

Control of redox properties of cytochrome c by special electrostatic interactions.

An assessment is made of the proposal: electrostatic interactions between the ferric ion of oxidised cytochrome c and its haem propionate sidechains assists in determining the value of the redox potential and plays an important role in the redox state conformation change. Differences between the properties of homologous cytochromes are proposed to be due to differences associated with the charge on their haem propionates.

Animals↗

Effect of electrostatic repulsion on the morphology and thermotropic transitions of anionic phospholipids.

Samples of dimyristoylphosphatidylglycerol and dimyristoylphosphatidylserine which exhibit highly cooperative phase transitions in suspension with 0.5 M NaCl, 10 mM sodium phosphate, pH 7.0, demonstrate a marked broadening of the phase transition when suspended in distilled water at pH 7. The cooperativity of the thermal transition of dimyristoylphosphatidic acid at pH 7.0, in contrast, was little affected by the presence or absence of 0.5 M NaCl. The most dramatic changes in phase transition properties were observed with phosphatidylglycerol. The morphology of phosphatidylglycerol was also altered by NaCl. At high salt concentrations, typical multilamellar structures were observed by freeze-fracture electron microscopy. However, in distilled water the large multilamellar structures are disrupted, with opened shells and smaller particles of 20-30 nm diameter being observed, in addition to a few larger vesicles. Structures of differing morphology could be partially separated from aqueous 'solutions' of phosphatidylglycerol by ultracentrifugation. The supernate contained only small particles. The results are discussed in terms of the large effective head group volume resulting from strong electrostatic repulsion at low ionic strengths. This allows the anionic lipids, particularly phosphatidylglycerol, to form hydrophilic surfaces with high curvature so as to seal the bilayer edges of discs or shells. Thus, certain anionic lipids in distilled water destabilize bilayers by a mechanism which is opposite to that found with lipids which destabilize bilayers by forming the hexagonal phase.

Anions↗

Involvement of electrostatic phenomena in phospholamban-induced stimulation of Ca uptake into cardiac sarcoplasmic reticulum.

The activity of the Ca-pumping ATPase of cardiac sarcoplasmic reticulum (SR) is controlled by the phosphorylation of the intrinsic regulatory protein phospholamban (PLB), which affects both the apparent Km(Ca) and the Vmax of the transport process. We have investigated the correlation between phosphorylation of PLB and the surface potential of the SR membrane. This latter influences the local concentration of relevant ionic species near biological membranes and thus modulates the activity of ion pumps and channels. The partitioning of the anionic probe 8-anilino-1-naphthalenesulfonate (ANS-) into the SR membrane was found to be dependent on the phosphorylation level of PLB. Changes of the surface membrane potential up to 7 mV could be obtained by phosphorylation. The increase in the apparent affinity of the Ca pump for Ca2+ induced by PLB phosphorylation was clearly reduced at high ionic strength, i.e. under conditions known to reduce the surface membrane potential and all processes dependent on it. The results show that electrostatic phenomena can account, in good part, for the modulation of the Ca pump by PLB in cardiac SR.

Adenosine Triphosphatases↗

Electrostatic coupling between membrane proteins.

Charges on membrane proteins are argued to produce very large electric fields within the membrane which may be felt by neighbouring membrane proteins. The activity of many membrane proteins may be sensitive to the electric field in the membrane; thus one membrane protein may affect the activity of another via the local electric field without any contact between the two. More specific electrostatic interactions are possible with binding between the two proteins. The possible roles of such interactions in bioenergetics, neurophysiology and signal transduction are discussed.

Electricity↗

Electrostatic repulsion between molecules of like charge can be misinterpreted as binding.

Spectroscopic methods have shown that Ca2+ chelators interact with Ca2(+)-binding proteins. These spectral alterations have been interpreted as evidence for the binding of chelator by the proteins. We show by direct examination of EDTA interaction with calmodulin and alpha-lactalbumin that these proteins repel EDTA rather than bind it. The repulsion is reduced by increased salt concentration but is unaffected by Ca2+ binding to the proteins. The acidic protein, alpha-lactalbumin, repells the negatively charged EDTA and inorganic phosphate whereas the basic protein, lysozyme, repells the positively charged spermine. Thus, spectroscopic changes induced by negatively charged Ca2+ chelators on negatively charged Ca2(+)-binding proteins are due to electrostatic repulsion, and not to binding. These observations underscore the possible pitfalls of using spectroscopic methods alone to analyze protein-ligand interactions.

Calcium↗

Phosphatidylglycerol dependent protein translocation across the Escherichia coli inner membrane is inhibited by the anti-cancer drug doxorubicin. Evidence for an electrostatic interaction between the signal sequence and phosphatidylglycerol.

OmpF-Lpp, a model secretory protein, requires both a positively charged signal sequence and phosphatidylglycerol (PG) for efficient translocation across the E. coli inner membrane. Modification of the signal sequence can, however, remove both these prerequisites for translocation providing OmpF-Lpp mutants which undergo either PG and charge dependent or PG and charge independent translocation. Here we show that positively charged membrane interactive compounds (polylysine & doxorubicin) are able to inhibit PG dependent translocation of the OmpF-Lpp signal sequence mutants but not PG independent translocation. Doxorubicin is also shown to bind more efficiently to liposomes containing increased levels of anionic lipid indicating that in these assays it may be inhibiting translocation by preventing electrostatic interaction between the anionic lipid head group and the positively charged signal sequences.

Bacterial Outer Membrane Proteins↗

Inositol phospholipids cause the activation of adrenal tyrosine hydroxylase through their electrostatic action on the enzyme.

The effects of inositol phospholipids on adrenal tyrosine hydroxylase (TH) were studied. Phosphatidylinositol (PI), phosphatidylinositol 4-phosphate (PIP) and phosphatidylinositol 4,5-bisphosphate (PIP2) caused a rapid and concentration-dependent activation of TH in vitro. The potency of this activation was dependent on the number of phosphate groups in the lipid molecule, and the activation was completely suppressed by increasing the concentrations of salts in the reaction mixture. These results seem to indicate that the activation of TH by inositol phospholipids may be due to their electrostatic action, and suggest a possible involvement of inositol phospholipids in the regulation of TH activity in vivo.

Adrenal Medulla↗

Electrostatic interactions in globular proteins. Different dielectric models applied to the packing of alpha-helices.

The alpha-helix has an electric dipole arising from the alignment of peptide dipoles parallel to the helix axis. The effect of this alpha-helix dipole in the stabilization of the tertiary structure of globular proteins is examined using three of the commonly used dielectric models. These models are; (1) the uniform dielectric model, (2) the distance dependent dielectric model and (3) the cavity dielectric model. Of these the cavity model is the most reasonable since it attempts to describe the markedly different dielectric responses of the solvent and the protein. The protein is set at a low continuous dielectric value and the solvent is set at a high continuous dielectric value. It is found that for the cavity model of the dielectric the calculated interaction energy between two helices is strongly dependent upon how exposed the helix termini are to solvent. For helices with exposed termini the calculations using the cavity model yield electrostatic interaction energies which are lower by an order of magnitude than those obtained using the uniform dielectric model.

Electricity↗

Calculations of electrostatic energies in proteins. The energetics of ionized groups in bovine pancreatic trypsin inhibitor.

The importance of including different energy contributions in calculations of electrostatic energies in proteins is examined by calculating the intrinsic pKa values of the acidic groups of bovine pancreatic trypsin inhibitor. It appears that such calculations provide a powerful and revealing test; the relevant solvation energies of the ionized acids are of the order of -70 kcal/mol (1 cal = 4.184 J), and microscopic calculations that do not attempt to simulate the complete protein dielectric effect (including the surrounding solvent) can underestimate the solvation energy by as much as 50 kcal/mol. Reproducing correctly, by the same set of parameters, the solvation energies of ionized acids in different sites of a protein cannot be accomplished by including only part of the key energy contributions. The problems associated with macroscopic calculations are also considered and illustrated by the specific case of bovine pancreatic trypsin inhibitor. A promising approach is shown to be provided by a refinement of the previously developed Protein Dipoles Langevin Dipoles model. This model seems to represent consistently the microscopic dielectric of the protein and the surrounding water molecules. The model overcomes the problems associated with the macroscopic models (by treating explicitly the solvent molecules) and avoids the convergence problems associated with all-atom solvent models (by treating the average solvent polarization rather than averaging the actual polarization energy). This paper describes in detail the actual implementation of the model and examines its performance in evaluating intrinsic pKa values. Preliminary microscopic considerations of charge-charge interactions are presented.

Animals↗

Electrostatic effects on modification of charged groups in the active site cleft of subtilisin by protein engineering.

The dielectric constant in the active site cleft of subtilisin from Bacillus amyloliquefaciens has been probed by mutating charged residues on the rim and measuring the effect on the pKa value of the active site histidine (His64) by kinetics. Mutation of a negatively charged surface residue, which is 12 to 13 A from His64, to an uncharged one Asp----Ser99) lowers the pKa of the histidine by up to 0.4 unit at low ionic strength (0.005 to 0.01 M). This corresponds to an apparent dielectric constant of about 40 to 50 between Asp99 and His64. The mutation is in an external loop that is known to tolerate a serine at position 99 from homologies with subtilisins from other bacilli. The environment between His64 and Asp99 is predominantly protein. Another charged residue that is at a similar distance from His64 (14 to 15 A) and is also in an external loop that is known to tolerate a serine residue is Glu156, at the opposite side of the active site. There is only water in a direct line between His64 and Glu156. Mutation of Glu----Ser156 also lowers the pKa of His64 by up to 0.4 unit at low ionic strength. This change again corresponds to an apparent dielectric constant of about 40 to 50. The pKa values were determined from the pH dependence of kcat/KM for the hydrolysis of peptide substrates, with a precision of typically +/- 0.02 unit. The following suggests that the changes in pKa are real and not artefacts of experimental conditions: Hill plots of the data for pKa determination have gradients (h) of -1.00(+/- 0.02), showing that there are negligible systematic deviations from theoretical ionization curves involving a monobasic acid: the pH dependence for the hydrolysis of two different substrates (succinyl-L-alanyl-L-alanyl-L-prolyl-L-phenylalanyl p-nitroanilide and benzoyl-L-valyl-L-glycyl-L-arginyl p-nitroanilide) gives identical results so that the pKa is independent of substrate; the pH dependence is unaffected by changing the concentration of enzyme, so that aggregation is not affecting the results; the shift in pKa is masked by high ionic strength, as expected qualitatively for ionic shielding of electrostatic interactions.

Amino Acid Sequence↗

Variable electrostatic interaction between DNA and coat protein in filamentous bacteriophage assembly.

A restriction fragment carrying the major coat protein gene (gene VIII) was excised from the DNA of the class I filamentous bacteriophage fd, which infects Escherichia coli. This fragment was cloned into the expression plasmid pKK223-3, where it came under the control of the tac promoter, generating plasmid pKf8P. Bacteriophage fd gene VIII was similarly cloned into the plasmid pEMBL9+, enabling it to be subjected to site-directed mutagenesis. By this means the positively charged lysine residue at position 48, one of four positively charged residues near the C terminus of the protein, was turned into a negatively charged glutamic acid residue. The mutated fd gene VIII was cloned back from the pEMBL plasmid into the expression plasmid pKK223-3, creating plasmid pKE48. In the presence of the inducer isopropyl-beta-D-thiogalactoside, the wild-type and mutated coat protein genes were strongly expressed in E. coli TG1 cells transformed with plasmids pKf8P and pKE48, respectively, and the product procoat proteins underwent processing and insertion into the E. coli cell inner membrane. A net positive charge of only 2 on the side-chains in the C-terminal region is evidently sufficient for this initial stage of the virus assembly process. However, the mutated coat protein could not encapsidate the DNA of bacteriophage R252, an fd bacteriophage carrying an amber mutation in its own gene VIII, when tested on non-suppressor strains of E. coli. On the other hand, elongated hybrid bacteriophage particles could be generated whose capsids contained mixtures of wild-type (K48) and mutant (E48) subunits. This suggests that the defect in assembly may occur at the initiation rather than the elongation step(s) in virus assembly. Other mutations of lysine-48 that removed or reversed the positive charge at this position in the C-terminal region of the coat protein were also found to lead to the production of commensurately longer bacteriophage particles. Taken together, these results indicate direct electrostatic interaction between the DNA and the coat protein in the capsid and support a model of non-specific binding between DNA and coat protein subunits with a stoicheiometry that can be varied during assembly.

Bacteriophages↗