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Effects of Eucalyptus plantations on detritus, decomposers, and detritivores in streams.

Vast areas of the Iberian Peninsula are covered by monocultures of the exotic tree Eucalyptus globulus. Given that (1) leaf litter produced in the riparian areas is the main energy source for small streams, and (2) trees differ in their nutrient content, chemical defenses, and physical attributes, eucalypt plantations have the potential to affect the biology of streams. Research teams from the University of Coimbra and the University of the Basque Country have been addressing the potential effects of eucalypt plantations at several levels of study. Here we review the main conclusions of these investigations. Eucalypt plantations produced less litter than some deciduous forests. However, there were marked differences in timing of litterfall: litter production peaked during autumn in deciduous forests, whereas in the eucalypt forests it tended to peak in summer and to be more evenly distributed throughout the year. Despite these differences, the average standing stock of organic matter was higher in the eucalypt than in the deciduous forest. This may be attributed to (1) the occurrence of spates or heavy rain in autumn, the period of maximum litter fall in deciduous forests, and (2) bark accumulation in eucalypt forests. Because of differences in leaf composition, the nutrient input in eucalypt forests seems to be lower than in deciduous forests. The rate of decomposition of eucalypt leaves was strongly dependent on nutrients in the water: in nutrient-poor waters it was slower than that of most other leaf species, whereas in nutrient-rich waters it can be as fast as alder--a fast-decaying species. The biomass and cumulative diversity of aquatic hyphomycetes colonizing leaves did not differ between eucalypt and other native leaf species, but fungal sporulation generally peaked 2 weeks later on eucalypt leaves. This lag disappeared when lipids (but not polyphenolics) were chemically removed from eucalypt leaves. Similarly, addition of eucalypt oils to culture media retarded or suppressed fungal growth. Streams bordered by Eucalyptus had lower diversity of fungal spores (but similar spore densities) in Portugal; less consistent patterns were found in similar experiments in Spain. Eucalyptus leaves proved to be poor food for shredders. Under laboratory conditions leaves of Eucalyptus ranked low in food selection experiments using native shredders. The same shredders failed to grow and died when fed exclusively eucalypt leaves. The removal of oils from eucalypt leaves resulted in increased feeding rates, whereas the transfer of oils to alder leaves resulted in decreased feeding rates. The effect of eucalypt plantations on stream invertebrate communities is not very consistent. In nutrient-poor waters, fewer invertebrates colonized eucalypt than alder leaves, but this effect was mitigated after a microbial conditioning period in nutrient-rich waters. Portuguese streams bordered by Eucalyptus had lower numbers of invertebrates than streams surrounded by deciduous forests. In Spanish streams differences were less marked and nonexistent when looking at the composition of the communities, which change more from year to year than from site to site. Most of the eucalypt streams studied in Portugal and Spain dried up in summer, a fact that might reflect an increase in soil hydrophobity produced by Eucalyptus plantations. The very short planting-to-harvest period of eucalypt plantations results in additional impacts, such as soil loss, siltation of streams, or reduced amounts of woody debris in stream channels, which affects their capacity to retain leaf-litter, as well as the availability of habitat for invertebrates and fish. The studies by the Portuguese and Spanish research teams confirm the importance of maintaining riparian buffer strips to reduce human impact on streams and rivers.

Agriculture↗

Economic analysis of sequestering carbon in green ash forests in the Lower Mississippi River Valley.

Since the U.S. is the largest emitter of carbon dioxide (CO2), it has become crucial to develop options that are both cost effective and supportive of sustainable development to reduce atmospheric CO2. Electric utility companies have the options of reducing their use of fossil fuels, switching to alternative energy sources, increasing efficiency, or offsetting carbon emissions. This study determined the cost and profitability of sequestering carbon in green ash plantations, and the number of tons of carbon that can be sequestered. The profitability of green ash is 2,342 dollars and 3,645 dollars per acre on site indices (measurement of soil quality) 65 and 105 land, respectively, calculated with a 2.5% alternative rate of return (ARR). These figures shift to -248 dollars and -240 dollars calculated with a 15.0% ARR. If landowners who have an ARR of 2.5% can sell carbon credits for 10 dollars per ton of carbon, profits will increase by 107 dollars per acre on poor sites and 242 dollars on good sites. Over one rotation (cutting cycle), 38.56 net tons of carbon can be sequestered on an acre of poor quality land and 51.35 tons on good quality land. The cost of sequestering carbon, without including revenues from timber production and carbon credits, ranges from a high of 15.20 dollars per ton on poor sites to 14.41 dollars on good sites, calculated with a 2.5% ARR; to a high of 8.51 dollars per ton on poor sites to 7.63 dollars on good sites, calculated with a 15.0% ARR. The cost of storing carbon can be reduced significantly if the trees can be sold for wood products.

Carbon↗

A maximum likelihood-based method for mining major genes affecting a quantitative character.

In this article, we present a maximum likelihood-based analytical approach for detecting a major gene of large effect on a quantitative trait in a progeny population derived from a mating design. Our analysis is based on a mixed genetic model specifying both major gene and background polygenic inheritance. The likelihood of the data is formulated by combining the information about population behaviors of the major gene during hybridization and its phenotypic distribution densities. The EM algorithm is implemented to obtain maximum likelihood estimates for population and quantitative genetic parameters of the major locus. This approach is applied to detect an overdominant gene governing stem volume growth in a factorial mating design of aspen trees. It is suggested that further molecular genetic research toward mapping single genes affecting aspen growth and production based on the same experimental data has a high probability of success.

Algorithms↗

Rain forest promotes trophic interactions and diversity of trap-nesting Hymenoptera in adjacent agroforestry.

1. Human alteration of natural ecosystems to agroecosystems continues to accelerate in tropical countries. The resulting world-wide decline of rain forest causes a mosaic landscape, comprising simple and complex agroecosystems and patchily distributed rain forest fragments of different quality. Landscape context and agricultural management can be expected to affect both species diversity and ecosystem services by trophic interactions. 2. In Central Sulawesi, Indonesia, 24 agroforestry systems, differing in the distance to the nearest natural forest (0-1415 m), light intensity (37.5-899.6 W/m(-2)) and number of vascular plant species (7-40 species) were studied. Ten standardized trap nests for bees and wasps, made from reed and knotweed internodes, were exposed in each study site. Occupied nests were collected every month, over a period totalling 15 months. 3. A total of 13,617 brood cells were reared to produce adults of 14 trap-nesting species and 25 natural enemy species, which were mostly parasitoids. The total number of species was affected negatively by increasing distance from forest and increased with light intensity of agroforestry systems. The parasitoids in particular appeared to benefit from nearby forests. Over a 500-m distance, the number of parasitoid species decreased from eight to five, and parasitism rates from 12% to 4%. 4. The results show that diversity and parasitism, as a higher trophic interaction and ecosystem service, are enhanced by (i) improved connectivity of agroecosystems with natural habitats such as agroforestry adjacent to rain forest and (ii) management practices to increase light availability in agroforestry, which also enhances richness of flowering plants in the understorey.

Animals↗

Temporal and spatial genetic structure in Vitellaria paradoxa (shea tree) in an agroforestry system in southern Mali.

Ten microsatellite loci were used to investigate the impact of human activity on the spatial and temporal genetic structure of Vitellaria paradoxa (Sapotaceae), a parkland tree species in agroforestry systems in southern Mali. Two stands (forest and fallow) and three cohorts (adults, juveniles and natural regeneration) in each stand were studied to: (i) compare their levels of genetic diversity (gene diversity, HE; allelic richness, Rs; and inbreeding, FIS); (ii) assess their genetic differentiation (FST); and (iii) compare their levels of spatial genetic structuring. Gene diversity parameters did not vary substantially among stands or cohorts, and tests for bottleneck events were nonsignificant. The inbreeding coefficients were not significantly different from zero in most cases (FIS = -0.025 in forest and 0.045 in fallow), suggesting that the species is probably outbreeding. There was a weak decrease in F(IS) with age, suggesting inbreeding depression. Differentiation of stands within each cohort was weak (FST = 0.026, 0.0005, 0.010 for adults, juveniles and regeneration, respectively), suggesting extensive gene flow. Cohorts within each stand were little differentiated (FST = -0.001 and 0.001 in forest and fallow, respectively). The spatial genetic structure was more pronounced in fallow than in forest where adults showed no spatial structuring. In conclusion, despite the huge influence of human activity on the life cycle of Vitellaria paradoxa growing in parkland systems, the impact on the pattern of genetic variation at microsatellite loci appears rather limited, possibly due to the buffering effect of extensive gene flow between unmanaged and managed populations.

Demography↗

Spatial and population genetic structure of microsatellites in white pine.

We evaluated the population genetic structure of seven microsatellite loci for old growth and second growth populations of eastern white pine (Pinus strobus). From each population, located within Hartwick Pines State Park, Grayling, Michigan, USA, 120-122 contiguous trees were sampled for genetic analysis. Within each population, genetic diversity was high and inbreeding low. When comparing these populations, there is a significant, but small (less than 1%), genetic divergence between populations. Spatial distance between populations or timber harvest at the second growth site were reasonable explanations for the observed minor differences in allele frequencies between populations. Spatial autocorrelation analysis suggested that, for the old growth population, weak positive structuring at 15 m fits the isolation by distance model for a neighbourhood size of about 100 individuals. In comparison, genotypes were randomly distributed in the second growth population. Thus, logging may have decreased spatial structuring at the second growth site, suggesting that management practices may be used to alter natural spatial patterns. In addition, the amount of autocorrelation in the old growth population appears to be lower for some of the microsatellites, suggesting higher numbers of rare alleles and that higher mutation rates may have directly affected spatial statistics by reducing structure.

Forestry↗

Impacts of gene flow and logging history on the local genetic structure of a scattered tree species, Sorbus torminalis L. Crantz.

Sorbus torminalis L. Crantz is a colonizing tree species usually found at low density in managed European forests. Using six microsatellite markers, we investigated spatial and temporal patterns of genetic structure within a 472-ha population of 185 individuals to infer processes shaping the distribution of genetic diversity. Only eight young stems were found to be the result of vegetative reproduction. Despite high levels of gene flow (standard deviation of gene dispersal = 360 m), marked patterns of isolation by distance were detected, associated with an aggregated distribution of individuals in approximately 100-m patches. This spatial structure of both genes and individuals is likely to result from patterns of seedling recruitment combined with low tree density. Our results suggest that landscape factors and logging cycles markedly shape the distribution of favourable sites for seedling establishment, which are then colonized by sibling cohorts as a result of joint seed transportation by frugivores. These combined genetic and demographic processes result in similar genetic structure both within and among logging units. However, conversion to high forest may enhance genetic structuring.

Age Factors↗

Do farmers reduce genetic diversity when they domesticate tropical trees? A case study from Amazonia.

Agroforestry ecosystems may be an important resource for conservation and sustainable use of tropical trees, but little is known of the genetic diversity they contain. Inga edulis, a widespread indigenous fruit tree in South America, is used as a model to assess the maintenance of genetic diversity in five planted vs. five natural stands in the Peruvian Amazon. Analysis of five SSR (simple sequence repeat) loci indicated lower allelic variation in planted stands [mean corrected allelic richness 31.3 (planted) and 39.3 (natural), P = 0.009]. Concerns regarding genetic erosion in planted Amazonian tree stands appear valid, although allelic variation on-farm is still relatively high.

DNA Primers↗

Comparison of quantitative and molecular variation in agroforestry populations of the shea tree (Vitellaria paradoxa C.F. Gaertn) in Mali.

In this study we investigated the within- and between-population genetic variation using microsatellite markers and quantitative traits of the shea tree, Vitellaria paradoxa, an important agroforestry tree species of the Sudano-Sahelian region in Africa. Eleven populations were sampled across Mali and in northern Côte d'Ivoire. Leaf size and form and growth traits were measured in a progeny test at the nursery stage. Eight microsatellites were used to assess neutral genetic variation. Low levels of heterozygosity were recorded (1.6-3.0 alleles/locus; H(E) = 0.25-0.42) and the fixation index (F(IS) = -0.227-0.186) was not significantly different from zero suggesting that Hardy-Weinberg equilibrium is encountered in all populations sampled. Quantitative traits exhibited a strong genetic variation between populations and between families within populations. The degree of population differentiation of the quantitative traits (Q(ST) = 0.055-0.283, Q(STmean) = 0.189) strongly exceeds that in eight microsatellite loci (F(ST) = -0.011-0.142, F(STmean) = 0.047). Global and pairwise F(ST) values were very low and not significantly different from zero suggesting agroforestry practices are amplifying gene flow (Nm = 5.07). The population means for quantitative traits and the rainfall variable were not correlated, showing variation was not linked with this climatic cline. It is suggested that this marked differentiation for quantitative traits, independent of environmental clines and despite a high gene flow, is a result of local adaptation and human selection of shea trees. This process has induced high linkage disequilibrium between underlying loci of polygenic characters.

Cote d'Ivoire↗

Thigmomorphogenesis: field and laboratory studies of Abies fraseri in response to wind or mechanical perturbation.

Field- and greenhouse-grown Abies fraseri (Pursh) Poir. (Fraser fir) were analyzed for wind- or mechanically-induced flexure changes. These changes included inhibition of stem and needle elongation, reinforcement of branch bases around the stem, and increased radial growth in the direction of the mechanical perturbation (MP). Mature trees exposed to high wind conditions were severely flag-formed. These modified tree crowns had a lower drag than crowns of non-flag formed trees in wind-tunnel tests. In both field-grown and greenhouse-grown A. fraseri, MP induced a decrease in flexibility and increased elasticity of the stems. The increased radial growth of the stems overrode the increase in elasticity, resulting in the overall decrease in flexibility. The increase in radial growth caused by wind or mechanical flexure was due to greater cell divisions of the vascular cambium, resulting in increased numbers of tracheids. The decrease in stem elongation in these trees was due, at least in part, to a decrease in tracheid length. The potential biological and mechanical significance of these induced growth changes in trees are addressed. The data support the thigmomorphogenetic theory, which states that plants respond to wind and other mechanical perturbations in a way that is favorable to the plant for continued survival in windy environments.

Biomechanical Phenomena↗

Thigmomorphogenesis: anatomical, morphological and mechanical analysis of genetically different sibs of Pinus taeda in response to mechanical perturbation.

Twenty-three open pollinated families (half-sibs) and four controlled pollinated families (full-sibs) of Pinus taeda L. (loblolly pine) were grown in a greenhouse and analyzed for changes induced by mechanical perturbation (MP). These changes included inhibition of stem and needle elongation, bracing of branch nodes, and increased radial growth in the direction of the MP. Inhibition of stem elongation was the least variable feature measured. Leaf extension and stem diameter were highly variable between half-sibs. MP induced increased drag in greenhouse grown P. taeda in wind-tunnel tests. In P. taeda, MP induced decreased flexibility and increased elasticity and plasticity of the stem. The increased radial growth of the stems overrode the increase in elasticity, resulting in an overall decrease in flexibility. MP trees had a higher rupture point than non-MP controls. Increased radial growth is a result of more rapid cell divisions of the vascular cambium, resulting in increased numbers of tracheids. The decreased leader growth is partly due to a decreased tracheid length in response to MP.

Biomechanical Phenomena↗

A spatially explicit decision support model for restoration of forest bird habitat.

The historical area of bottomland hardwood forest in the Mississippi Alluvial Valley has been reduced by >75%. Agricultural production was the primary motivator for deforestation; hence, clearing deliberately targeted higher and drier sites. Remaining forests are highly fragmented and hydrologically altered, with larger forest fragments subject to greater inundation, which has negatively affected many forest bird populations. We developed a spatially explicit decision support model, based on a Partners in Flight plan for forest bird conservation, that prioritizes forest restoration to reduce forest fragmentation and increase the area of forest core (interior forest >1 km from "hostile" edge). Our primary objective was to increase the number of forest patches that harbor >2000 ha of forest core, but we also sought to increase the number and area of forest cores >5000 ha. Concurrently, we targeted restoration within local (320 km2) landscapes to achieve > or =60% forest cover Finally, we emphasized restoration of higher-elevation bottomland hardwood forests in areas where restoration would not increase forest fragmentation. Reforestation of 10% of restorable land in the Mississippi Alluvial Valley (approximately 880,000 ha) targeted at priorities established by this decision support model resulted in approximately 824,000 ha of new forest core. This is more than 32 times the amount of core forest added through reforestation of randomly located fields (approximately 25,000 ha). The total area of forest core (1.6 million ha) that resulted from targeted restoration exceeded habitat objectives identified in the Partners in Flight Bird Conservation Plan and approached the area of forest core present in the 1950s.

Animals↗

Cost-efficiency of decaying wood as a surrogate for overall species richness in boreal forests.

Decaying wood is one of the most important elements for species richness in boreal forests. We tested how well reserve selection based on the amount and quality of decaying wood results in a representation of four ecologically different taxa (beetles, birds, wood-inhabiting fungi, and vascular plants). We also compared the cost-efficiency of the use of dead-wood indicators with comprehensive species inventory. Our database included 32 seminatural old-forest stands located in northern Finland. Decaying wood was a relatively good indicator of saproxylic species but not overall species richness. Even though dead wood did not reflect accurately overall species richness, our results indicated that the use of decaying wood as an indicator in site selection was more cost-efficient than using information from large-scale species inventories. Thus, decaying wood is a valuable surrogate for species richness, but other cost-efficient indicators that reflect the requirements of those species which are not dependent on decaying wood should be identified.

Animals↗