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PubMed1984

A computer algorithm for the simulation of any nuclear magnetic resonance (NMR) imaging method.

More than a dozen Nuclear Magnetic Resonance (NMR) imaging methods have been described using different radio-frequency pulse sequences, magnetic field gradient variations, and data processing. In order to have a theoretical understanding in the most general case, we have conceived a computer program for the simulation of NMR imaging techniques. The algorithm uses the solution of the Bloch equations at each point of a simulated object. The direction of every elementary magnetic moment is computed at each instant, and stored in an array giving the global signal to be processed, whatever the pulse and gradient sequence. To test the validity of this program, we have simulated some well-known experimental results. Some applications are presented which contribute to the understanding of image distortions and to techniques such as selective radio-frequency pulse or oscillating gradients. This program can be used to unravel physical and technological causes of image distortions, to have a "microscopic" look at any parameter of an experiment, and to study the contrast given by various NMR imaging techniques as a function of the three NMR parameters, i.e., the hydrogen nuclei density rho and the relaxation times T1 and T2.

Computers↗
PubMed2004

Improvement of homonuclear dipolar decoupling sequences in solid-state nuclear magnetic resonance utilising radiofrequency imperfections.

The often annoying imperfections in the phases and pulses of typical radiofrequency multiple-pulse irradiation schemes for homonuclear dipolar decoupling are revisited and analysed here. The analysis is with respect to one such multiple-pulse sequence, namely, the windowed phase-modulated Lee-Goldburg sequence. The error terms in the Hamiltonian due to pulse imperfections may lead to effective rotation of the spins around the z-axis giving rise to image free and high-resolution 1H spectra. Certain precautions to be taken with regard to scale factor estimation are also detailed. The analysis also points out the range of off-set values where the best homonuclear dipolar decoupling performance of a particular pulse scheme may be obtained.

Algorithms↗
PubMed1997

Artificially produced cartilage lesions in small joints: detection with optimized MRI-sequences.

The purpose of this study was to evaluate different magnetic resonance imaging (MRI) pulse sequences in the detection of artificial cartilage lesions in small joints using an animal model. A total of 32 artificial cartilage lesions were created in the knee joints of 20 rabbits. Twenty lesions were produced 4 weeks and 12 lesions 1 h before the MRI examination, performed in an extremity coil at 1.0 T. All joints were examined with five imaging sequences: (1) a conventional T1-weighted spin-echo (SE)-sequence (repetition time [TR] 600 ms, echo time [TE] 15 ms), (2) a T2-weighted turbo-SE-sequence (TR 2000 ms, TE 85 ms), (3) a two-dimensional (2D) gradient echo (GE)-sequence (TR 440 ms, TE 10 ms, flip angle 60 degrees) and (4,5) two three-dimensional (3D) GE-sequences (TR 40 ms, TE 7 ms, flip angle 40 degrees, with fat suppression (FS) and TR 30 ms, TE 9 ms, flip angle 40 degrees). Two examinations had to be excluded because of insufficient image quality and the remaining examinations were analyzed by two experienced radiologists. The MRI images were correlated with the pathologic findings and anatomical structures were scored according to a 5-level scale. Direct comparison of the pathological and MRI findings showed that 19 of the 30 artificially induced cartilage lesions were detected with the FS 3D GE-sequence, 13 with the 2D GE-sequence, 11 with the 3D GE-sequence, 3 with the T1-weighted SE-sequence, and 2 with the T1-weighted SE-sequence. The highest percentage of artificial cartilage lesions was demonstrated using a fat-suppressed 3D GE-sequence. However, the analysis of cartilage defects in small joints with optimized sequences as well as clinical routine hardware and software had limitations. Therefore a pilot study was performed analyzing newly developed high resolution FS 3D GE images obtained from 5 rabbit knees with 10 cartilage lesions at 1.5 T. Two sequences were used with 1.0 and 0.5 mm slice thickness, a matrix of 256 x 256 and 512 x 256 and a field of view of 12 x 6 and 8 x 6 cm. In this small subset detection rates were substantially higher than in the 30 rabbit knees examined before.

Animals↗
PubMed1994

Shunt flow measurement and evaluation of valve oscillation with a spin-echo phase-contrast MR sequence.

PURPOSE: To present a spin-echo phase-contrast (SEPC) magnetic resonance pulse sequence designed to measure the very slow flow in ventricular shunt tubing. MATERIALS AND METHODS: A flow phantom constructed of shunt tubing and incorporating no valve or a high-, medium-, or low-pressure valve was connected to a flow pump. Flow rates were 0.05-1.00 mL/min (72-1,440 mL/d). Flow measurement was performed with the thin-section SEPC sequence. RESULTS: The flow rates measured with SEPC imaging correlated closely with the pump flow rate for the entire physiologic spectrum of shunt flow rates. This was true for all valves, resulting in overall R2s of .974 at 4 cm/sec and .980 at 2 cm/sec. Shunt flow was pulsatile with valves in place. There was a linear relationship between flow rate and the frequency of valve opening and closing. CONCLUSION: The SEPC technique is an accurate and noninvasive method of measuring shunt flow.

Cerebrospinal Fluid Shunts↗
PubMed1997

RF gradient BIRD/TANGO sequence to eliminate uncoupled magnetization.

A modification of the BIRD and TANGO sequences is presented which employs radiofrequency field gradients to eliminate the net magnetization from uncoupled spins, while completely preserving coupled magnetization. The standard BIRD and TANGO sequences cause selective nutation of protons directly bound to a coupling partner, while returning uncoupled magnetization to +z. These sequences lend themselves naturally to modification using RF gradients, which require no increase in pulse-sequence complexity while providing substantial suppression of uncoupled resonances and elimination of typical antiphase and multiple-quantum error terms that arise from improperly set pulse lengths or delays. In the RF-gradient BIRD/TANGO sequence, the uncoupled magnetization is dephased in a plane orthogonal to the RF axis, while the desired signal components are refocused, effectively in a rotary echo. The sequence has applications to solvent suppression and selective isotopomer excitation. It is demonstrated for selective excitation of the satellites in a sample of chloroform, yielding suppression of the uncoupled magnetization by factor of approximately 800.

Chloroform↗
PubMed1999

Accuracy of T1 measurement in dynamic contrast-enhanced breast MRI using two- and three-dimensional variable flip angle fast low-angle shot.

In vivo T1 measurements, used to monitor the uptake of contrast agent by tissues, are typically performed as a first step in implementing compartmental analysis of contrast-enhanced breast magnetic resonance imaging (MRI) data. We have extended previously described methodology for in vivo T1 measurement (using a variable flip-angle gradient-recalled echo technique) to two-dimensional (2D), fast low-angle shot (FLASH). This approach requires computational modeling of slice-selective radiofrequency (RF) excitation to correct for nonrectangular slice profiles. The accuracy with which breast tissue T1 values can be measured by this approach is examined: T1 measurements from phantom and in vivo image data acquired with 2D and 3D FLASH imaging sequences are presented. Significant sources of error due to imaging pulse sequence quality and RF transmit field nonuniformity in the breast coil device that will have detrimental consequences for compartmental analysis are identified. Rigorous quality assurance programs with calibrated phantoms are thus recommended, to verify the accuracy with which T1 measurements are obtained.

Breast↗
PubMed2005

Fast spin-echo for multiple mouse magnetic resonance phenotyping.

High-resolution magnetic resonance imaging is emerging as a powerful tool for phenotyping mice in biologic studies of genetic expression, development, and disease progression. In several applications, notably random mutagenesis trials, large cohorts of mice must be examined for abnormalities that may occur in any part of the body. In the aim of establishing a protocol for imaging multiple mice simultaneously in a standardized high-throughput fashion, this study investigates variations of a three-dimensional fast spin-echo sequence that implements driven equilibrium, modified refocusing, and partial excitation pulses. Sequence variations are compared by simulated and experimental measurements in phantoms and mice. Results indicate that when using a short repetition time (TR<or=T1) a sequence employing a partial excitation tip angle provides both improved signal and good T2 contrast compared with standard fast spin-echo imaging. This sequence is used to simultaneously acquire four live mouse head images at 100 microm isotropic resolution with a scan time under 3 h at 7 T.

Animals↗
PubMed2001

A Q-band pulse EPR/ENDOR spectrometer and the implementation of advanced one- and two-dimensional pulse EPR methodology.

A versatile high-power pulse Q-band EPR spectrometer operating at 34.5--35.5 GHz and in a temperature range of 4--300 K is described. The spectrometer allows one to perform one- and two-dimensional multifrequency pulse EPR and pulse ENDOR experiments, as well as continuous wave experiments. It is equipped with two microwave sources and four microwave channels to generate pulse sequences with different amplitudes, phases, and carrier frequencies. A microwave pulse power of up to 100 W is available. Two channels form radiofrequency pulses with adjustable phases for ENDOR experiments. The spectrometer performance is demonstrated by single crystal pulse ENDOR experiments on a copper complex. A HYSCORE experiment demonstrates that the advantages of high-field EPR and correlation spectroscopy can be combined and exploited at Q-band. Furthermore, we illustrate how this combination can be used in cases where the HYSCORE experiment is no longer effective at 35 GHz because of the shallow modulation depth. Even in cases where the echo modulation is virtually absent in the HYSCORE experiment at Q-band, matched microwave pulses allow one to get HYSCORE spectra with a signal-to-noise ratio as good as at X-band. Finally, it is shown that the high microwave power, the short pulses, and the broad resonator bandwidth make the spectrometer well suited to Fourier transform EPR experiments.

Journal Article↗
PubMed2002

Quantitative measurement of two-dimensional distribution functions of diffusion and relaxation in grossly inhomogeneous fields.

We demonstrate the quantitative extraction of multidimensional distribution functions in the presence of grossly inhomogeneous fields. Examples are shown for diffusion-T(2) distribution functions and T(1)-T(2) distribution functions. The pulse sequences consist of an initial editing sequence followed by a long series of nominal 180 degrees pulses. They are designed such that the kernels describing the relationships between the distribution functions and the measured data are separable. The required phase cycling is discussed. We analyze in detail the extra spin dynamics effects due to the strong field inhomogeneities including the effects on diffusion and relaxation. A recently developed algorithm is used to invert the data and extract stable multidimensional distribution functions in an efficient manner. We present examples for several applications of this new technique. Diffusion-relaxation distribution functions can be used for fluid identification and for the characterization of pore geometry of porous media based on the effects of restricted diffusion. We have also determined T(1)-T(2) distribution functions of water saturated sedimentary rock and find excellent agreement with previous measurements performed in homogeneous fields.

Journal Article↗
PubMed2005

Studies of organically functionalized mesoporous silicas using heteronuclear solid-state correlation NMR spectroscopy under fast magic angle spinning.

Highly resolved solid-state HETCOR NMR spectra between protons and low gamma nuclei ((13)C and (29)Si) can be suitably obtained on surfaces using a "brute force" (1)H-(1)H decoupling by MAS at rates > or =40 kHz. Despite a small rotor volume (<10 microL), a (1)H-(13)C HETCOR spectrum of allyl groups (AL, -CH(2)-CH=CH(2)) covalently anchored to the surface of MCM-41 silica was acquired without using isotope enrichment. The advantages of using fast MAS in such studies include easy setup, robustness, and the opportunity of using low RF power for decoupling. In the case of the (1)H-(29)Si HETCOR experiment, the sensitivity can be dramatically increased, in some samples by more than 1 order of magnitude, through implementing into the pulse sequence a Carr-Purcell-Meiboom-Gill train of pi pulses at the (29)Si spin frequency. The use of low-power heteronuclear decoupling is essential in the (1)H-(29)Si CPMG-HETCOR experiment, due to unusually long acquisition periods. These methods provided detailed structural characterization of the surface of AL-MCM mesoporous silica.

Journal Article↗
PubMed1988

Magnetic resonance imaging of the orbits using a binocular surface coil.

Sixty subjects, including 12 normal volunteers, have been studied using the Aberdeen 0.08 T magnetic resonance imager. A wide range of pathological conditions, including both ocular and and orbital disease, have been examined using a specialized binocular surface coil. The images produced using this coil are superior to those made with a head coil and have the advantage of demonstrating both eyes simultaneously. Each patient has been studied using a pulse sequence combining alternate saturation-recovery and inversion-recovery pulses. The resultant short time-to-inversion inversion-recovery and saturation-recovery images have been shown to be accurate in demonstrating the normal anatomy of the globe and orbit and for the demonstration of a wide range of disease states.

Abscess↗
PubMed1980

Heart rate, multiple body temperature, long-range and long-life telemetry system for free-ranging animals.

A long-range and long-life telemetry system for heart rate and multiple body temperatures from free-ranging animals is described. This system includes an implantable transmitter, external receiver-retransmitter collar, and a signal conditioner interface circuit to assist in demodulation of receiver tone outputs before data processing. The size of the implant is suitable for animals with body weights of a few kilograms or more; further size reduction of the implant is possible. The ECG is sensed by electrodes designed for internal telemetry and to reduce movement artifacts. The R-wave characteristics are then specifically selected to trigger a short radio frequency pulse. Temperatures are sensed at desired locations by thermistors and then, based on a heart-beat counter, transmitted intermittently via pulse interval modulation. This modulation scheme includes first and last calibration intervals for a reference by ratios with the temperature intervals for as much as a range of 0-50 degrees C with a resolution of 0.1 degrees C. Pulse duration and pulse sequencing are used to discriminate between heart rate and temperature pulses as well as radio frequency interference. The implanted transmitter might be used alone for experiments on animals that frequent particular locations within a large territory, on animals in virtually any laboratory situation, or on animals in moderate-sized enclosures, such as those in a zoological garden. The implanted transmitter is otherwise interfaced with the receiver-retransmitter collar that employs commercial tracking equipment to achieve the long-range transmission. The objective of the design was to achieve a high degree of experimental flexibility and overall high quality in performance. The system was tested in prototype form on a dog.

Animals↗
PubMed2001

CPMG sequences with enhanced sensitivity to chemical exchange.

Improved relaxation-compensated Carr-Purcell-Meiboom-Gill pulse sequences are reported for studying chemical exchange of backbone 15N nuclei. In contrast to the original methods [J. P. Loria, M. Rance, and A. G. Palmer, J. Am. Chem. Soc. 121, 2331-2332 (1999)], phenomenological relaxation rate constants obtained using the new sequences do not contain contributions from 1H-1H dipole-dipole interactions. Consequently, detection and quantification of chemical exchange processes are facilitated because the relaxation rate constant in the limit of fast pulsing can be obtained independently from conventional 15N spin relaxation measurements. The advantages of the experiments are demonstrated using basic pancreatic trypsin inhibitor.

Aprotinin↗
PubMed2000

In vivo glucose detection by homonuclear spectral editing.

A frequency-selective multiple-quantum-coherence spectral editing pulse sequence, Ssel-MQC, was implemented for the detection of the betaH1-glucose resonance at 4.63 ppm in rat brain in vivo. Unwanted signal suppression and glucose coherence transfer pathway selection were performed with magnetic field gradients. To optimize sensitivity, the sequence was executed with surface coil signal reception and adiabatic RF pulse transmission. The glucose editing capabilities of Ssel-MQC were first evaluated in vitro. Ssel-MQC achieved excellent water suppression (suppression factor >10(5)), at the expense of an approximately 60% loss of the glucose signal due to incomplete coherence transfer pathway selection. Next, the sequence was used for in vivo glucose detection in normal rat brain during D-glucose infusion and in the brain of diabetic rats prior to and following insulin infusion.

Animals↗
PubMedDate not supplied

Nuclear magnetic resonance signal from flowing nuclei in rapid imaging using gradient echoes.

A theoretical description of the nuclear magnetic resonance (NMR) signal from flowing nuclei has been developed for rapid imaging sequences that use small flip angles and gradient refocused echoes. Both laminar and plug flow models have been considered and formulas derived relating mean image signal intensity to flip angle, pulse sequence repetition interval (TR), and flow velocity. It is shown that the rate of approach to steady-state conditions determines the degree of flow enhancement. Experimental measurements have been performed on a flow phantom in a whole-body NMR imaging system operating at 0.15 T using the spoiled FLASH sequence with different radiofrequency pulse flip angles and flow rates. There is excellent agreement between the experimental results and the theoretical predictions up to the onset of turbulence.

Blood Flow Velocity↗
PubMed2000

Analysis of the Look-Locker T(1) mapping sequence in dynamic contrast uptake studies: simulation and in vivo validation.

An alternative to the pulse sequences at present used in dynamic contrast uptake MRI is the dynamic LL-EPI T(1) mapping method. This method generates T(1) estimates in a few seconds, thereby allowing dynamic studies. A particular advantage of the LL-EPI technique is that it provides the opportunity to generate spatial and temporal information about the paramagnetic contrast agent concentration independently of the inflow rate. This paper illustrates, by computer simulations, the accuracy of the estimated 1/T(1) value when using the LL-EPI technique in situations that are not supported by the model. The simulated situations not supported by the model are those in which the longitudinal and transversal relaxation rates change during the T(1) mapping. The most critical moment occurs during a bolus passage of contrast agent when the concentration gradient is large. The computer simulations of the LL-EPI T(1) mapping method in non-supported situations show that in normal perfused capillary tissue the error in the estimated 1/T(1) value is within the absolute error of 0.1 s(-1) in most simulated situations, although in a typical vessel the simulations do indicate that the stated absolute error tolerance of 0.5 s(-1) is exceeded relatively easily. However, this transgression can be rectified by a non-bolus injection of the contrast agent media.

Brain↗
PubMed1997

T2-weighted MR imaging of the liver: optimization of hybrid-RARE sequences.

The objectives of this study were to optimize T2-weighted hybrid-RARE pulse sequences for clinical MR imaging of the liver, and to compare them to the conventional spin-echo (CSE) sequence. Specifically, the ranges of the echo train length (ETL) and the effective echo time (TEeff) were investigated to optimize image quality and liver-spleen contrast, in healthy volunteers. A total of thirteen volunteers were scanned at 1.5 Tesla with an extensive array of hybrid-RARE scans. The images were analyzed quantitatively with respect to CNR (contrast-to-noise ratio of spleen vs. liver), SNR (signal to noise ratio of the spleen), SIR (signal intensity ratio of liver and spleen) and CDR (contrast difference ratio between the spleen and liver). The images were also analyzed qualitatively with respect to image sharpness, vascular artifacts, ghosting, chemical shift, and truncations. Results of quantitative analysis indicated that CDR and SIR of hybrid-RARE at higher ETL (> 13) were consistently better than both the reference CSE and the lower ETL sequences (p < 0.05) at all TEeff. SNR was slightly inferior for all hybrid-RARE sequences than for the CSE sequence. Image quality for hybrid-RARE sequences with ETL > 13 proved to be consistently better than that for the CSE (TE = 90 ms) with respect to imaging sharpness, vascular artifacts and ghosting artifacts (p < 0.05). In conclusion, the optimized hybrid-RARE sequences with ETL greater than or equal to 13 are capable of producing sharp and relatively artifact free images with the advantage of a much greater acquisition time efficiency.

Adult↗