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PubMed1995

Particulate methane monooxygenase genes in methanotrophs.

A 45-kDa membrane polypeptide that is associated with activity of the particulate methane monooxygenase (pMMO) has been purified from three methanotrophic bacteria, and the N-terminal amino acid sequence was found to be identical in 17 of 20 positions for all three polypeptides and identical in 14 of 20 positions for the N terminus of AmoB, the 43-kDa subunit of ammonia monooxygenase. DNA from a variety of methanotrophs was screened with two probes, an oligonucleotide designed from the N-terminal sequence of the 45-kDa polypeptide from Methylococcus capsulatus Bath and an internal fragment of amoA, which encodes the 27-kDa subunit of ammonia monooxygenase. In most cases, two hybridizing fragments were identified with each probe. Three overlapping DNA fragments containing one of the copies of the gene encoding the 45-kDa pMMO polypeptide (pmoB) were cloned from Methylococcus capsulatus Bath. A 2.1-kb region was sequenced and found to contain both pmoB and a second gene, pmoA. The predicted amino acid sequences of these genes revealed high identity with those of the gene products of amoB and amoA, respectively. Further hybridization experiments with DNA from Methylococcus capsulatus Bath and Methylobacter albus BG8 confirmed the presence of two copies of pmoB in both strains. These results suggest that the 45- and 27-kDa pMMO-associated polypeptides of methanotrophs are subunits of the pMMO and are present in duplicate gene copies in methanotrophs.

Amino Acid Sequence↗
PubMed1996

Modeling and measuring the elastic properties of an archaeal surface, the sheath of Methanospirillum hungatei, and the implication of methane production.

We describe a technique for probing the elastic properties of biological membranes by using an atomic force microscope (AFM) tip to press the biological material into a groove in a solid surface. A simple model is developed to relate the applied force and observed depression distance to the elastic modulus of the material. A measurement on the proteinaceous sheath of the archaebacterium Methanospirillum hungatei GP1 gave a Young's modulus of 2 x 10(10) to 4 x 10(10) N/m2. The measurements suggested that the maximum sustainable tension in the sheath was 3.5 to 5 N/m. This finding implied a maximum possible internal pressure for the bacterium of between 300 and 400 atm. Since the cell membrane and S-layer (wall) which surround each cell should be freely permeable to methane and since we demonstrate that the sheath undergoes creep (expansion) with pressure increase, it is possible that the sheath acts as a pressure regulator by stretching, allowing the gas to escape only after a certain pressure is reached. This creep would increase the permeability of the sheath to diffusible substances.

Archaea↗
PubMed1996

Membrane-associated methane monooxygenase from Methylococcus capsulatus (Bath).

An active preparation of the membrane-associated methane monooxygenase (pMMO) from Methylococcus capsulatus Bath was isolated by ion-exchange and hydrophobic interaction chromatography using dodecyl beta-D-maltoside as the detergent. The active preparation consisted of three major polypeptides with molecular masses of 47,000, 27,000, and 25,000 Da. Two of the three polypeptides (those with molecular masses of 47,000 and 27,000 Da) were identified as the polypeptides induced when cells expressing the soluble MMO are switched to culture medium in which the pMMO is expressed. The 27,000-Da polypeptide was identified as the acetylene-binding protein. The active enzyme complex contained 2.5 iron atoms and 14.5 copper atoms per 99,000 Da. The electron paramagnetic resonance spectrum of the enzyme showed evidence for a type 2 copper center (g perpendicular = 2.057, g parallel = 2.24, and magnitude of A parallel = 172 G), a weak high-spin iron signal (g = 6.0), and a broad low-field (g = 12.5) signal. Treatment of the pMMO with nitric oxide produced the ferrous-nitric oxide derivative observed in the membrane fraction of cells expressing the pMMO. When duroquinol was used as a reductant, the specific activity of the purified enzyme was 11.1 nmol of propylene oxidized.min-1.mg of protein-1, which accounted for approximately 30% of the cell-free propylene oxidation activity. The activity was stimulated by ferric and cupric metal ions in addition to the cytochrome b-specific inhibitors myxothiazol and 2-heptyl-4-hydroxyquinoline-N-oxide.

Alkenes↗
PubMed1964

Viologen dye inhibition of methane formation by Methanobacillus omelianskii.

Wolin, E. A. (University of Illinois, Urbana), R. S. Wolfe, and M. J. Wolin. Viologen dye inhibition of methane formation by Methanobacillus omelianskii. J. Bacteriol. 87:993-998. 1964.-Low concentrations of methyl or benzyl viologen inhibit the formation of CH(4) from ethanol and CO(2) by washed cells of Methanobacillus omelianskii. Hydrogen, which is normally formed from ethanol, accumulates in greater quantities when CH(4) formation is inhibited by viologens. The viologens do not stimulate H(2) formation from ethanol in the absence of CO(2). Inhibition of CH(4) formation by the viologens is not reversed by H(2). A variety of other dyes and possible electron acceptors were tested for inhibition, and none was inhibitory in the same low-concentration range at which the viologens were effective.

Carbon Dioxide↗
PubMed1990

Breath hydrogen response to lactulose in healthy subjects: relationship to methane producing status.

In order to assess the relationship between methane (CH4) producing status and the breath excretion of hydrogen (H2) in healthy subjects, breath CH4 and H2 were simultaneously measured for 14 hours after oral ingestion of 10 g lactulose in 65 young volunteers. Forty were breath CH4 producers and 25 were not. Statistically significant differences were observed between both groups, with lower values for CH4 producers recorded for the following parameters: fasting basal value of breath H2 (8.1 (4.9) v 5.2 (3.7) ppm, p less than 0.05), mouth-to-caecum transit time (68 (24) v 111 (52) min, p less than 0.005), and breath H2 production measured as area under the curve 13.1 (6.9) v 8.8 (3.8) 10(3) ppm/min, p less than 0.02). There was no significant correlation between individual production of breath H2 and CH4. These results indicate that the response to lactulose depends on breath CH4 producing status. In clinical practice, defining normal values of mouth-to-caecum transit time without knowledge of breath CH4 producing status may lead to misinterpretation of the H2 breath test.

Adult↗
PubMed2000

Fatal methane and cyanide poisoning as a result of handling industrial fish: a case report and review of the literature.

The potential health hazards of handling industrial fish are well documented. Wet fish in storage consume oxygen and produce poisonous gases as they spoil. In addition to oxygen depletion, various noxious agents have been demonstrated in association with spoilage including carbon dioxide, sulphur dioxide, and ammonia. A fatal case of methane and cyanide poisoning among a group of deep sea trawler men is described. Subsequent independent investigation as a result of this case led to the discovery of cyanides as a further potential noxious agent. This is thus the first case in which cyanide poisoning has been recognised as a potentially fatal complication of handling spoiled fish. The previous literature is reviewed and the implications of the current case are discussed.

Animals↗
PubMed2004

1,1-Bis(3'-indolyl)-1-(p-substitutedphenyl)methanes induce peroxisome proliferator-activated receptor gamma-mediated growth inhibition, transactivation, and differentiation markers in colon cancer cells.

1,1-Bis(3'indolyl)-1-(p-substitutedphenyl)methanes containing p-trifluoromethyl (DIM-C-pPhCF)), p-t-butyl (DIM-C-pPhtBu), and p-phenyl (DIM-C-pPhC6H5) groups induce peroxisome proliferator-activated receptor gamma (PPARgamma)-mediated transactivation in HT-29, HCT-15, RKO, and SW480 colon cancer cell lines. Rosiglitazone also induces transactivation in these cell lines and inhibited growth of HT-29 cells, which express wild-type PPARgamma but not HCT-15 cells, which express mutant (K422Q) PPARgamma. In contrast, DIM-C-pPhCF3, DIM-C-pPhtBu, and DIM-C-pPhC6H5 inhibited growth of both HT-29 and HCT-15 cells with IC50 values ranging from 1 to 10 micromol/L. Rosiglitazone and diindolylmethane (DIM) analogues did not affect expression of cyclin D1, p21, or p27 protein levels or apoptosis in HCT-15 or HT-29 cells but induced keratin 18 in both cell lines. However, rosiglitazone induced caveolins 1 and 2 in HT-29 but not HCT-15 cells, whereas these differentiation markers were induced by DIM-C-pPhCF3 and DIM-C-pPhC6H5 in both cell lines. Because overexpression of caveolin 1 is known to suppress colon cancer cell and tumor growth, the growth inhibitory effects of rosiglitazone and the DIM compounds are associated with PPARgamma-dependent induction of caveolins.

Apoptosis↗
PubMed2002

Application of Ni:SiO2 nanocomposite to control the carbon deposition on the carbon dioxide reforming of methane.

Stable Ni nanoparticles embedded in a mesoporous silica material were used as catalysts for the conversion of methane into synthesis gas. This catalyst has the singular properties of controlling the carbon deposition and deactivation of active sites. A comparative study of our nanocomposites with conventional catalysts showed that impregnation material presented a preferential encapsulation and growth of carbon nanotubes on the metal surface. The impregnated catalyst showed a higher tendency for carbon nanotube and whiskers formation.

Carbon↗
PubMed1998

Assessing data for precursors of CO2 and methane in King County, Washington, 1990.

Evaluation of policies designed to reduce emissions of global warming gases will require valid data about in-use quantities of these gases' precursors. This article assesses the quality of available data for many significant precursors of CO2 and methane in King County, Washington, which is an area with minimal variations in climate as well as rapid population growth and development. Available data support an estimate of 21,000,000 metric tons of CO2-equivalent gases emitted in 1990 from selected precursors. There is also evidence that electricity conservation programs and recycling both reduce CO2 emissions. Requirements for adequate baseline data include constant and valid data definitions as well as monthly time series. To evaluate policies over periods of years, databases must be designed to withstand frequent and rapid changes in national economies; they must also permit analysis of consumer choices affecting fossil fuels and other precursors of warming gases. In almost every case, current data do not satisfy these requirements.

Carbon Dioxide↗
PubMed2002

The effect of various environmental and design parameters on methane oxidation in a model biofilter.

Methane from landfills built with RCRA (Resource Conservation and Recovery Act) covers is frequently vented directly to the atmosphere. Alternatively, landfill gasses could be vented through a layer of soil that could serve as a biofilter to oxidize CH4 to carbon dioxide and water. Properly designed soil biofilters may reduce atmospheric CH4 emissions from landfills and help reduce the accumulation of greenhouse gasses in the atmosphere. This study was conducted to investigate the performance of a lab-scale model biofilter system using soil as the filterbed medium in packed columns to measure the effect of a variety of environmental and design factors on the CH4 oxidation capacity of a soil biofilter. Biofilter performance was tested under a variety of environmental and design conditions. The optimum soil moisture content for CH4 oxidation in a loamy sand was 13% by weight. Addition of NO3-N did not affect the CH4 oxidation rate. Soil depths of 30 cm and 60 cm were equally efficient in CH4 oxidation. When the CH4 loading rate was decreased, the percentage of CH4 oxidized increased. The maximum CH4 oxidation rate was 27.2 mol m(-2) d(-1) under optimum conditions.

Air Pollutants↗
PubMed2006

Predicted growth of world urban food waste and methane production.

Landfill gas emissions are one of the largest anthropogenic sources of methane especially because of food waste (FW). To prevent these emissions growing with world population, future FW best management practices need to be evaluated. The objective of this paper was therefore to predict FW production for 2025 if present management practices are maintained, and then, to compare the impact of scenario 1: encouraging people to stay in rural areas and composting 75% of their FW, and; of scenario 2, where in addition to scenario 1, composting or anaerobically digesting 75% of urban FW (UFW). A relationship was established between per capita gross domestic product (GDP) and the population percentage living in urban areas (%UP), as well as production of municipal solid waste (MSW) and UFW. With estimated GDP and population growth per country, %UP and production of MSW and UFW could be predicted for 2025. A relatively accurate (R(2) > 0.85) correlation was found between GDP and %UP, and between GDP and mass of MSW and FW produced. On a global scale, MSW and UFW productions were predicted to increase by 51 and 44%, respectively, from 2005 to 2025. During the same period, and because of its expected economic development, Asia was predicted to experience the largest increase in UFW production, of 278 to 416 Gkg. If present MSW management trends are maintained, landfilled UFW was predicted to increase world CH4 emissions from 34 to 48 Gkg and the landfill share of global anthropogenic emissions from 8 to 10%. In comparison with maintaining present FW management practices, scenario 1 can lower UFW production by 30% and maintain the landfill share of the global anthropogenic emissions at 8%. With scenario 2, the landfill share of global anthropogenic emissions could be further reduced from 8 to 6% and leachate production could be reduced by 40%.

Air Pollutants↗
PubMed2005

A genomic view of methane oxidation by aerobic bacteria and anaerobic archaea.

Recent sequencing of the genome and proteomic analysis of a model aerobic methanotrophic bacterium, Methylococcus capsulatus (Bath) has revealed a highly versatile metabolic potential. In parallel, environmental genomics has provided glimpses into anaerobic methane oxidation by certain archaea, further supporting the hypothesis of reverse methanogenesis.

Anaerobiosis↗
PubMed2026

Blood-derived gene expression profiles associated with dietary microalgae oil intake and methane emission variation in lambs.

BACKGROUND: Minimising methane (CH4) emissions from livestock production is a global priority, and feed modifications, such as supplementing diets with microalgae, have previously been shown to help reducing enteric CH4 production. This study explored blood-derived host gene expression profiles from twenty lambs supplemented with increasing levels of microalgae oil to investigate their transcriptional responses associated with varying microalgae oil levels while also exploring the host systemic responses towards varied CH4 productions. RESULTS: Findings revealed no significant changes in CH4 production with increasing levels of microalgae oil intake through phenotypic analysis (P = 0.18). However inter-individual variations in CH4 production ranged from 27.02 to 47.86 g/day throughout the study period. Blood RNA-Sequencing identified 64 significant genes including DHCR7, DHCR24, HMGCS1, INSIG1, LSS, MSMO1, and SQLE, which were involved in lipid metabolism, and steroid biosynthesis that became enriched alongside increasing microalgae oil intake levels thereby contributing to a positive impact on lambs' metabolic functions. Additionally, seven significant blood-expressed host genes (NME4, MARCHF3, PLXNB3, LOC132657460, LOC121819234, LOC105603087, LOC101116551) functionally enriched in nucleotide metabolic pathways and immune responses were identified to have significant positive associations with increasing CH4 production. Importantly, this study found no overlap between genes associated with microalgae oil intake and those linked to CH4 emissions. CONCLUSIONS: Findings suggest that microalgae oil intake and inter-individual variations in CH₄ production are associated with distinct blood-derived transcriptional responses. Although such signals should be interpreted as proxies for systemic host responses rather than direct measures of rumen-specific processes, these results emphasise the importance of considering host-associated molecular variations alongside dietary CH₄-mitigation strategies.

Animals↗
PubMed1994

Molecular properties of the "ideal" inhaled anesthetic: studies of fluorinated methanes, ethanes, propanes, and butanes.

We examined 35 unfluorinated, partially fluorinated, and perfluorinated methanes, ethanes, propanes, and butanes to define those molecular properties that best correlated with optimum solubility (low) and potency (high). Limited additional data were obtained on longer-chained alkanes. Using standard techniques, we assessed anesthetic potency (minimum alveolar anesthetic concentration [MAC] in rats); vapor pressure; stability in soda lime; and solubility in saline, human blood, and oil. If nonflammability, stability, low solubility in blood, clinically useful vapor pressures, and potency permitting delivery of high concentrations of oxygen are essential components of an anesthetic that might supplant those presently available, our data indicate that such a drug would have three or four carbon atoms with single or dual hydrogenation of two carbons, especially terminal carbons. We conclude that: 1) smaller and larger molecules and lesser hydrogenation provide insufficient potency; 2) high vapor pressures of smaller molecules do not permit the use of variable bypass vaporizers; 3) greater hydrogenation enhances flammability, and complete hydrogenation decreases potency; 4) internal hydrogenation decreases stability; and 5) greater hydrogenation increases blood solubility.

Alkanes↗
PubMed1996

Carbonic anhydrase activators. XV. A kinetic study of the interaction of bovine isozyme II with pyrazoles, bis- and tris-azolyl-methanes.

A series of eighteen substituted pyrazoles, bis- and tris-azolyl-methanes or ethanes was investigated for their interaction with the zinc enzyme carbonic anhydrase (CA). Several types of activities were detected, generally as CA activators, but Ca inhibitory properties were also discovered for the very sterically-demanding derivatives of these series. Kinetic determinations by a stopped-flow technique for carbon dioxide hydration reaction allowed the determination of Michaelis-Menten constants, which are identical in the absence or in the presence of these modulators, proving a noncompetitive mechanism of activation-inhibition. MNDO calculations were used with moderate success to explain the biological results.

Animals↗
PubMed1999

Methane concentration and isotopic composition measurements with a mid-infrared quantum-cascade laser.

A quantum-cascade laser operating at a wavelength of 8.1 micrometers was used for high-sensitivity absorption spectroscopy of methane (CH4). The laser frequency was continuously scanned with current over more than 3 cm-1, and absorption spectra of the CH4 nu 4 P branch were recorded. The measured laser linewidth was 50 MHz. A CH4 concentration of 15.6 parts in 10(6) ( ppm) in 50 Torr of air was measured in a 43-cm path length with +/- 0.5-ppm accuracy when the signal was averaged over 400 scans. The minimum detectable absorption in such direct absorption measurements is estimated to be 1.1 x 10(-4). The content of 13CH4 and CH3D species in a CH4 sample was determined.

Atmosphere↗
PubMedDate not supplied

Methane emissions of rice increased by elevated carbon dioxide and temperature.

Methane (CH4) effluxes by paddy-culture rice (Oryza sativa L.) contribute about 16% of the total anthropogenic emissions. Since radiative forcing of CH4 at current atmospheric concentrations is 21 times greater on a per mole basis than that of carbon dioxide (CO2), it is imperative that the impact of global change on rice CH4 emissions be evaluated. Rice (cv. IR72) was planted in sunlit, closed-circulation, controlled-environment chambers in which CH4 efflux densities were measured daily. The CO2 concentration was maintained at either 330 or 660 micromol mol(-1). Air temperatures were controlled to daily maxima and minima of 32/23, 35/26, and 38/29 degrees C at each CO2 treatment. Emissions of CH4 each day were determined during a 4-h period after venting and resealing the chambers at 0800 h. Diurnal CH4 effluxes on 77, 98, and 119 d after planting (DAP) were obtained similarly at 4-h intervals. Emissions over four-plant hills and over flooded bare soil were measured at 53, 63, and 100 DAP. Emissions were negligible before 40 DAP. Thereafter, emissions were observed first in high-CO2, high-temperature treatments and reached a sustained maximum efflux density of about 7 mg m(-2) h(-1) (0.17 g m(-2) d(-1)) near the end of the growing season. Total seasonal CH4 emission was fourfold greater for high-CO2, high-temperature treatments than for the low-CO2, low-temperature treatment, probably due to more root sloughing or exudates, since about sixfold more acetate was found in the soil at 71 DAP. Both rising CO2 and increasing temperatures could lead to a positive feedback on global warming by increasing the emissions of CH4 from rice.

Air↗
PubMed2005

Nitrogen oxide and methane emissions under varying tillage and fertilizer management.

Comprehensive assessment of the total greenhouse gas (GHG) budget of reduced tillage agricultural systems must consider emissions of nitrous oxide (N2O) and methane (CH4), each of which have higher global warming potentials than carbon dioxide (CO2). Tillage intensity may also impact nitric oxide (NO) emissions, which can have various environmental and agronomic impacts. In 2003 and 2004, we used chambers to measure N2O, CH4, and NO fluxes from plots that had been managed under differing tillage intensity since 1991. The effect of tillage on non-CO2 GHG emissions varied, in both magnitude and direction, depending on fertilizer practices. Emissions of N2O following broadcast urea (BU) application were higher under no till (NT) and conservation tillage (CsT) compared to conventional tillage (CT). In contrast, following anhydrous ammonia (AA) injection, N2O emissions were higher under CT and CsT compared to NT. Emissions following surface urea ammonium nitrate (UAN) application did not vary with tillage. Total growing season non-CO2 GHG emissions were equivalent to CO2 emissions of 0.15 to 1.9 Mg CO2 ha(-1) yr(-1) or 0.04 to 0.53 Mg soil-C ha(-1) yr(-1). Emissions of N2O from AA-amended plots were two to four times greater than UAN- and BU-amended plots. Total NO + N2O losses in the UAN treatment were approximately 50% lower than AA and BU. This study demonstrates that N2O emissions can represent a substantial component of the total GHG budget of reduced tillage systems, and that interactions between fertilizer and tillage practices can be important in controlling non-CO2 GHG emissions.

Agriculture↗