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PubMed2004

Population genetic structure of and inbreeding in an insular cattle breed, the Jersey, and its implications for genetic resource management.

The Jersey is a ubiquitous and successful breed of cattle that originates from the UK Channel Island of Jersey. While the breed has been exported extensively, no imports have taken place to the island since 1789, leading to a concern regarding possible losses of genetic diversity and increased inbreeding. We have conducted the first large-scale genetic analysis of the Jersey cattle using only samples from the island. A total of 223 cattle from all parishes except one were genotyped for 12 microsatellite loci. The average number of alleles per locus and expected heterozygosity were found to be comparatively high (n(A)=4, H(e)=0.64) with respect to that observed in a number of continental breeds. Only breeds that have been upgraded and are therefore the result of admixture are clearly more variable than the Jersey. We also found a significant but limited amount of genetic differentiation between parishes (F(st)=0.013), or even between farms (F(st)=0.035) despite an apparent lack of movement. This is confirmed by the application of two recent statistical methods. A Bayesian partition analysis shows that the most probable value of K, the number of possible hidden partitions, is 1 (P approximately 0.98). K=2 has a much lower probability (P approximately 0.02) while other values are essentially zero. Similarly, we were able to show that there was no support for departure from panmixia other than due to population structure, and thus that there is sufficient background gene flow across the island to overcome local drift. Overall, it appears that the current level of genetic diversity and its distribution within the island means it is unnecessary to import unrelated genetic material to the island for management purposes.

Alleles↗
PubMed2001

Human and other faeces as breeding media of the trachoma vector Musca sorbens.

The fly Musca sorbens Wiedemann (Diptera: Muscidae) apparently transmits Chlamydia trachomatis, causing human trachoma. The literature indicates that M. sorbens breeds predominantly in isolated human faeces on the soil surface, but not in covered pit latrines. We sought to identify breeding media of M. sorbens in a rural Gambian village endemic for trachoma. Test breeding media were presented for oviposition on soil-filled buckets and monitored for adult emergence. Musca sorbens emerged from human (6/9 trials), calf (3/9), cow (3/9), dog (2/9) and goat (1/9) faeces, but not from horse faeces, composting kitchen scraps or a soil control (0/9 of each). After adjusting for mass of medium, the greatest number of flies emerged from human faeces (1426 flies/kg). Median time for emergence was 9 (inter quartile range = 8-9.75) days post-oviposition. Of all flies emerging from faeces 81% were M. sorbens. Male and female flies emerging from human faeces were significantly larger than those from other media, suggesting that they would be more fecund and live longer than smaller flies from other sources. Female flies caught from children's eyes were of a similar size to those from human faeces, but significantly larger than those from other media. We consider that human faeces are the best larval medium for M. sorbens, although some breeding also occurs in animal faeces. Removal of human faeces from the environment, through the provision of basic sanitation, is likely to greatly reduce fly density, eye contact and hence trachoma transmission, but if faeces of other animals are present M. sorbens will persist.

Adolescent↗
PubMed1998

Genetic variation within the Hereford breed of cattle.

Genetic differentiation among Hereford populations from Britain, Ireland, Sweden, Canada and New Zealand together with six other beef breeds was assessed using blood type polymorphisms. Changes in the genetic structure of the British Hereford population over time were also examined. Loci surveyed were seven red cell antigen systems (A, B, C, F, L, S, Z), and two serum protein loci (transferrin and albumin). Within group variation was measured by the average expected heterozygosity, and between group relationships by genetic distance. There was significant genetic differentiation among Hereford populations from different countries. Differences between Hereford groups, however, were not as large as differences between breeds. There were also significance differences among British herds. The proportion of Canadian genes in the British 'hybrid' population was estimated to have increased from 0.42 (+/- 0.34) in the 1970s to 0.98 (+/- 0.11) in the 1990s. Canadian Hereford groups were found to be less heterozygous than other groups, and replacement of the British population with Canadian animals may lead to loss of variation. Breeding strategies that preserve original native genes in British Hereford populations should be considered by commercial breeders, in order to prevent the long-term loss of genetic variation within the breed.

Alleles↗
PubMed1999

Determination of genetic relationships among five indigenous Chinese goat breeds with six microsatellite markers.

Microsatellite variation was analyzed in five Chinese indigenous goat breeds, which include four Cashmere breeds (Tibetan, Neimonggol, Liaoning, Taihang) and one Hubei local breed (Matou) used for meat production. Five ovine and one bovine microsatellites, selected from eight ovine microsatellites and five bovine microsatellites were suitable for use in this study. With these six microsatellites, allele frequencies, heterozygosity, polymorphism information content (PIC) and effective allele number were calculated. A neighbor-joining tree was constructed using Nei's standard genetic distance (1978). In the tree, Neimonggol and Liaoning were grouped together, then with Taihang; while Tibetan and Matou individually had their own branch. The genetic relationship of five breeds corresponds to their history and geographic origins.

Animals↗
PubMed2000

Male-mediated introgression of Bos indicus genes into Argentine and Bolivian Creole cattle breeds.

The geographic distribution and frequency of Bos taurus and Bos indicus Y chromosome haplotypes amongst Argentine and Bolivian Creole cattle breeds were studied, using cytogenetic and molecular genetic techniques. A complete correspondence between Y chromosome morphology and the haplotype of the Y-linked microsatellite marker INRA 124 was found in all males examined. The taurine and indicine haplotypes were detected in 85.7 and 14.3% of the males studied, respectively, although these frequencies varied amongst the different breeds examined. The geographic distribution of this polymorphism suggests a pattern of zebu introgression in South America. The highest frequencies of the Zebu Y-chromosome are found in Brazilian populations (43-90%), in the eastern part of the continent, while it is absent in the southernmost breeds from Uruguay and Argentina. Bolivian breeds, at the centre of the continent, exhibit intermediate values (17-41%). This east/west and north/south gradient of male Zebu introgression could be explained by historical events and environmental factors.

Animals↗
PubMed2001

Genetic relationship amongst the major non-coding regions of mitochondrial DNAs in wild boars and several breeds of domesticated pigs.

We completed phylogenetic analysis of the major non-coding region of the mitochondrial DNA (mtDNA) from 159 animals of eight Euro-American and six East Asian domesticated pig breeds and 164 Japanese and five European wild boars. A total of 62 mtDNA haplotypes were detected. Alignment of these regions revealed nucleotide variations (including gaps) at 73 positions, including 58 sites with transition nucleotide substitutions, and two transversion substitutions. Phylogenetic analysis of the sequences could not organize domestic pig breeds into discrete clusters. In addition, many of the haplotypes found in members of diverged clustering groups were found primarily in Euro-American pig breeds, indicating extensive introgression of Asian domestic pigs into European breeds. Furthermore, phylogenetic analysis allocated the DNA sequences of non-coding regions into two different groups, and the deepest branchpoint of this porcine phylogeny corresponded to 86 000-136 000 years before present. This time of divergence would predate the historical period when the pig is thought to have been domesticated from the wild boar.

Animals↗
PubMed2003

Genetic analysis of the Saimiri breeding colony of the Pasteur Institute (French Guiana): development of a molecular typing method using a combination of nuclear and mitochondrial DNA markers.

Saimiri (Cebidae) groups a complex of species and subspecies, which present a large morphological plasticity. Genetic analysis is complicated by the absence of consensus on classification criteria and the paucity of molecular tools available for the genus. As the squirrel monkey is widely used in biomedical research, breeding centers have been established, but the genetic make up and diversity of many of the existing colonies is unknown precluding a rationale breeding policy. To develop a genetic typing strategy for the Saimiri breeding colony of Pasteur Institute of French Guiana, we have used Cytochrome b, a mitochondrial marker, and nuclear microsatellites. Cytochrome b sequences from wild-caught Saimiri boliviensis, Saimiri sciureus sciureus and S. s. collinsi reference specimens and captive animals identified 11 haplotypes, grouped into three distinct clades. An estimate of genetic variability within each captive morphotype, and of the extent of molecular divergence between the Bolivian, Guyanese and Brazilian breeds was obtained from the analysis of three nuclear microsatellites. Taxon-specific microsatellites enabled typing of F0-F3 animals, but did not differentiate Brazilian from Guyanese animals. Three locus microsatellite analysis of a representative sample from each generation showed no trend for loss of heterozygosity, and identified hybrid animals between Bolivian and the two others sub-species. These data provide novel evidence for taxonomic classification and a rationale strategy to further type the whole colony.

Animals↗
PubMed2002

Breed differences on the plasma availability of moxidectin administered pour-on to calves.

The pharmacokinetic profile of avermectin and milbemycin compounds is affected by different drug- and host-related factors. This work reports the influence of cattle breeds on the plasma kinetics of moxidectin (MXD) after topical (pour-on) administration. Parasite-free Aberdeen Angus and Holstein calves were treated with a commercial MXD pour-on formulation at 500 microg/kg. Blood samples were collected over a period of 35 days post-treatment and the recovered plasma was analysed by high performance liquid chromatography using fluorescence detection. MXD was detected in plasma from two hours up to 35 days post-treatment in animals from both breeds. A slow MXD absorption and delayed peak plasma concentration were observed in Aberdeen Angus compared to Holstein calves. Significant lower systemic availability (expressed as AUC) (P<0.01) and peak plasma concentration (C(max)) (P<0.05) were also observed in Aberdeen Angus calves, although the plasma mean residence time (MRT) and elimination half-lives (T(1/2el)) of MXD in both breeds were similar. The pharmacokinetic differences observed between cattle breeds contribute to explain the variability in the pattern of clinical efficacy for pour-on administered endectocide compounds reported in different field trials.

Administration, Topical↗
PubMed1989

Familiar neighbors enhance breeding success in birds.

We tested the hypothesis that long-term familiarity with neighbors is advantageous by determining whether male red-winged blackbirds (Agelaius phoeniceus) breeding adjacent to familiar neighbors have better reproductive success than other males. Using data gathered during a 10-yr study of breeding success, we found that males with familiar neighbors fledged, on average, significantly more offspring annually than males without familiar neighbors. We also found that the same males, breeding in different years on the same territories, had significantly larger harems in the years they had familiar neighbors. Improved reproductive success was due to the males' abilities to attract more females to nest in their territories. Alternative hypotheses to explain the positive relationship between familiar neighbors and breeding success were not supported by our data. Relatively high reproductive success for breeders with long-term neighbors may provide a basis for the evolution of cooperative behavior in this and other species.

Animals↗
PubMed2002

Differential retinal angiogenic response to sustained intravitreal release of VEGF and bFGF in different pigmented rabbit breeds.

PURPOSE: To determine if two different breeds of pigmented rabbits can demonstrate differences in the degree of inducible angiogenesis within the retina. METHODS: Non-biodegradable Hydron pellets approximately 1.5 mm in diameter containing both vascular endothelial growth factor (VEGF) and basic fibroblast growth factor (bFGF) were implanted intravitreally over the optic disk of either Dutch belt rabbits or New Zealand White/Black satin cross rabbits. Control animals from both groups were implanted with blank Hydron pellets. Animals were examined periodically over a 30-day period following implantation. Results were documented by fundus photography and flourescein angiography. Stages of neovascularization (NV) were graded between +1 (preproliferative) and +4 (total NV) with +5 for NV complicated by hemorrhage and/or retinal detachment. RESULTS: The angiogenic response in the retinas of pigmented NZW/Black satin cross rabbits (N = 5) following implantation of VEGF/bFGF-containing pellets varied extensively from the Dutch belt animals (N = 7). In the Dutch belt rabbits, grading of the angiogenic response demonstrated either +4 or +5 between day 20 and day 30 after implantation. In contrast, the NZW/Black satin cross animals gave a more muted response with a maximum grade of +2 following exposure to the same amount of VEGF and bFGF. Control eyes that received only blank pellets showed no evidence of retinal NV in either the Dutch belts (N = 5) or the NZW/Black satin cross rabbits (N = 5). Statistical analysis showed a significant interaction effect for breed and pellet type (F = 44.85 with 1 df, p < 0.00005), indicating a difference between the breeds in the angiogenic response to the pellet. Moreover, both the NZW/BSC and Dutch belt rabbits displayed a significant increase in angiogenesis with the VEGF/bFGF pellet in comparison to the blank pellet (p = 0.037 and p < 0.00005, respectively). CONCLUSIONS: These studies indicate that two different breeds of pigmented rabbits exhibit different angiogenic responses to the same amount of both VEGF and bFGF. Florid retinal NV leading to hemorrhage, fibrovascular membrane formation, and traction retinal detachment occurred in the Dutch belt rabbits while tortuosity and dilatation of existing blood vessels with subsequent regression occurred in the NZW/Black satin cross animals. Such differences in the angio-genic response may be due to differences in the genetic background of these animals. If genetic heteriogeneity exists for angiogenic responses, then understanding the genetic role in the regulation of angiogenesis will lead to the design of more effective anti-angiogenic agents and can provide predictive outcomes of individual responses to therapy.

Animals↗
PubMed1994

The effect of breed on the relationship between feed composition and the efficiency of protein utilization in pigs.

The objective of the present experiment was to test whether the relationship between feed composition and the efficiency of protein utilization in pigs was different between two very different breeds. Forty-eight entire male pigs, half Large White x Landrace (LW x) and half Chinese Meishan (CM), were assigned at 13 kg live weight either to an initial slaughter group or to one of six feeding treatments for 6 weeks. The two feeds used were starch, with 12.52 MJ metabolizable energy (ME) and 0 kg digestible crude protein (DCP)/kg, and a high-protein feed, with 11.95 MJ ME and 0.362 kg DCP/kg. In the first week the LW x pigs were given 400 g high-protein feed/d with 0, 100, 200 or 300 g starch/d, or 200 g high-protein feed/d with 400 or 500 g starch/d. The six diets had ME:DCP ratios of between 33 and 119 MJ/kg. The diet compositions were held constant within each of the six treatments but the allowances were increased weekly on time-based linear scales to be 2.25 as great in week six as in week one. The allowances for the CM pigs were 0.75 of those for the LW x. The calculated efficiency of protein utilization, ep, was found to be directly proportional, up to a maximum value, to the ME:DCP ratio of the diet for both breeds, as found previously for LW x male and female pigs. The overall constant of proportionality was ep = 0.0108 (SE 0.00024) ME:DCP, the value of which did not differ significantly between the two breeds. The maximum observed ep values were 0.710 (SE 0.014) and 0.824 (SE 0.016) for the LW x and CM pigs respectively. It is likely that the lower maximum value for the LW x pigs was an experimental artefact due to increased feed spillage by these pigs on the two highest starch allowances used. In previous experiments the maximum value of ep was found to be 0.813 for LW x pigs, a value similar to that found here for the CM pigs. The results are consistent with the view that the two very different pig breeds have the same net efficiency in using protein and use the same rules for partitioning a scarce resource such as energy.

Amino Acids↗
PubMed1975

A genetic analysis of adult mortality in Leghorn by heavy-breed reciprocal crosses.

1. Genetic mechanisms of resistance to disease in 1930 pullets and 296 cockerels were investigated by using a Leghorn line (G), a heavy-breed line (H), and their reciprocal crosses G x H and H x G plus two synthetic lines, GnH and HnG which were segregating for line-intact Z chromosomes. 2. The most frequent cause of death was leukosis. 3. Gmale x Hfemale pullets had a significantly higher adult mortality (40-9%) than the reciprocal cross (27-3%). 4. A direct effect of the Z sex chromosome on the incidence of leukosis or on total adult mortality could not be demonstrated. 5. Maternal breed effects and heterosis were relatively more important than Z sex chromosome and autosomal breed effects as causes of both leukosis and total laying house mortality. 6. The heavy-breed line had higher cellular resistance to the leukosis/sarcoma virus subgroups A and B than did the Leghorn line.

Animals↗
PubMed1987

Reproductive performance of dwarf broiler breeders given different allowances of food during the rearing and breeding periods and two lighting patterns.

1. Dwarf broiler breeders were either fed ad libitum or restricted to allow growth to mean body weights of 1.4 or 1.8 kg at 20 weeks of age. During the breeding period these birds were fed ad libitum, or food was restricted to different degrees and the birds subjected to two different incremental lighting patterns. 2. Egg production of birds fed ad libitum during the breeding period increased with the degree of food restriction during rearing. 3. Food restriction during the breeding period increased the egg production of birds weighing 1.8 kg at 20 weeks but decreased that of birds weighing only 1.4 kg. 4. Fertility was relatively low and inversely related to body fatness of females. 5. The differences in lighting pattern did not influence performance. 6. For optimum reproductive performance during the rearing period dwarfs should not be restricted so severely as conventional breeders. Best chick production was obtained from birds with a bodyweight of 1.8 kg at 20 weeks of age, which were subjected to a 10% restriction of food during the breeding period.

Age Factors↗
PubMed1993

Breed differences in the histochemical properties of the M. pubo-ischio-femoralis pars medialis myofibre of domestic cocks.

1. Histochemical properties of M. pubo-ischio-femoralis pars medialis (PIF muscle) were compared in 7 breeds of cocks. This muscle was largely composed of Type I fibres and their transitional form (Type I tr). Type IIA fibres were observed in the cranial part. 2. The weight and cross-sectional area of the PIF muscle increased with increasing body weight. However, the relative muscle development to body weight differed among the 7 breeds. 3. A quarter of Type I fibres were of the transitional variety in bantam fowls. Conversely, few, if any, Type I tr fibres were observed in the large breeds where the muscle was poorly developed. 4. As the histochemical properties of Type I fibres made an effective response to the different body weights and the relative PIF muscle development among breeds, it was concluded that PIF muscle performed an important function in supporting the body weight and maintaining posture.

Adenosine Triphosphatases↗
PubMed1994

Variation in selected blood plasma constituents during the post-partum and breeding periods in dairy cows.

Concentrations of insulin-like growth factor-I, albumin, beta hydroxybutyrate, glucose and urea were measured in 12 plasma samples collected over 9 weeks from mid-August from each of 40 cows in four seasonal herds which calved from mid-July. These herds comprised Jersey or Holstein-Friesian animals, with each breed grazed at two stocking rates. Daily dry matter intakes (kg dry matter/cow/day), which were estimated from pasture assessments before and after grazing, ranged from 4% (low stocked Jersey herd) to 38% (high stocked Friesian herd) below recommended intakes for each breed of cow in peak lactation. Stocking rate was associated with a 4% reduction in liveweight for cows in the high stocked herds and a 20% reduction in daily milk production (as a proportion of the low stocked herds' liveweight and milk production). Eight cows produced at least one blood sample with a beta hydroxybutyrate concentration of more than 1.0 mmol/l. There were 42% of samples with glucose concentrations greater than 4.1 mmol/l. These two concentrations were the maximum values classified as normal for these two metabolites by the Ruakura Animal Health Laboratory. No concentrations of the other metabolites were outside their respective normal ranges. Breed, age and individual animals usually had greater effects on the average metabolite concentrations than did stocking rate. The greatest effect was associated with sample day, especially for insulin-like growth factor-I and urea. A significant breed x stocking rate x sample day interaction in urea concentrations indicated that changes in the feeding value of the grazed pastures available to each herd were sufficient to produce separate fluctuating patterns in the daily average concentrations. These results showed that frequent sampling on a herd basis would be necessary to identify the significance of factors which may be contributing to sample day variation in the concentration of metabolites in the plasma of pasture-fed cows.

Journal Article↗
PubMed1993

Influence of litter size and breed on variation in length of gestation in the dog.

The variation in the length of gestation, the period from mating until parturition, was studied in 77 dogs of different breeds; the time for mating was determined by measuring peripheral blood progesterone levels. The mean length of gestation was 62.1 +/- 0.2 (S.E.M.) days, with a variation of 11 days. The number of pups appeared to influence the length of gestation. Length of gestation was negatively correlated (r = -0.96, P < 0.001, n = 44) with litter size in litters with 7 or fewer pups. The intra-breed variation in length of gestation in the five breeds represented by five or more bitches was 3-6 days. The mean gestation of Alsatians (60.1 +/- 0.5, n = 9) was shorter (P < 0.005) than that of the other breeds combined (62.3 +/- 0.3, n = 68). The primiparous/multiparous status of the bitch did not influence the length of gestation.

Animals↗
PubMed1998

Fertility of Shetland pony stallions used in different breeding systems: a retrospective study.

In horses reproductive performance is usually expressed as the foaling rate. This rate ranges from 40% to 80%. Three major factors contribute to this variation namely, the stallion, the mare and management. In this study, the performance of Shetland ponies kept in three different breeding systems was investigated retrospectively. In one breeding system, the stud farmer travelled with his stallion (n = 9) to the mare (system 1) while in another system, the stallion (n = 3) stayed at the stud farm and the mares came to the stallion (system 2). The last system was pasture breeding (system 3; n = 9). Each stallion participated in only one system. The average number of cycles per mare used for breeding did not differ significantly between systems 1 and 2. However, the number of matings per cycle was higher in system 2 than in system 1. The average number of mares serviced per stallion was 91, 50, and 17 for systems 1, 2 and 3, respectively. Mares mated in pasture had a 2.8-fold higher chance (p < 0.05) of having a foal the next season than the mares mated under systems 1 and 2. The foaling rate per season was 58%, 48%, and 80% for systems 1, 2 and 3, respectively. Management aspects play an important role in the relatively low foaling percentages of systems 1 and 2.

Animal Husbandry↗
PubMedDate not supplied

Corticosterone responses of grey-faced petrels (Pterodroma macroptera gouldi) are higher during incubation than during other breeding stages.

We report the results of the first field study examining seasonal changes in corticosterone responses of typically long-lived birds of the order Procellariiformes. In particular, we examined whether grey-faced petrels Pterodroma macroptera gouldi showed changes in circulating baseline corticosterone concentrations and corticosterone responses to a standardized handling protocol across the breeding season. Such changes have been associated with changes in body condition and variations in energy demands on adult birds through the breeding season. During early incubation, males were in significantly better condition than females that had just completed laying, whereas during late incubation, males were in significantly poorer condition than females. In spite of these differences, there was no significant difference in baseline corticosterone concentrations between sexes or among birds at different reproductive stages. However, we detected significant differences in corticosterone responses associated with a standardized handling protocol at different stages through the breeding season. Responses were significantly greater during incubation compared with the prelay period and late chick rearing. Body condition was weakly and negatively correlated with maximum and total integrated corticosterone level, indicating that some of the individual variability in stress corticosterone responses could be explained by variation in body condition. However, the largest stress response occurred during late incubation and was independent of sex, although males were in relatively poor condition and females in relatively good condition. This period coincided with the breeding stage in which energy constraints on individual adults were higher than at other periods of the reproductive cycle and birds may be physiologically primed for extended fasts.

Analysis of Variance↗