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[Experimentation of apiarian preparations for the direct and the indirect capping of the dental pulp].

With a view to extend the range of biologically active preparations for the direct and the indirect capping of the dental pulp the authors have used a paste made from an alcoholic solution of propolis and zincoxyde. The study was carried on in 150 teeth with indirect capping of deep cavities, and 50 teeth with direct capping. The evolution of the cappings was followed clinically, radiologically and morphologically. The results obtained showed that the paste with propolis exerts effects similar to those of zinc eugenate. The morphologic study of the indirect capping showed that secondary dentin developed shortly after the application of the paste, and that it was followed by the development of pulpolites and the sclerous transformation of the pulp. In teeth with direct capping a protective film developed at the opening of the dental chamber. With time the pulpal wound undergoes cicatrization by a process of fibrosis and there is a trend to remineralization. No areas of pulpal degenerescence were found the rest of the pulpal tissue, and this suggests that the paste is more histophilic than the pastes based on calcium hydroxide, with which an area of necrosis occurred at the opening of the chamber, and calcium and fibrous degenerescence occurred in the coronal pulp.

Dental Pulp Capping↗

Wave and defect dynamics in nonlinear photonic quasicrystals.

Quasicrystals are unique structures with long-range order but no periodicity. Their properties have intrigued scientists ever since their discovery and initial theoretical analysis. The lack of periodicity excludes the possibility of describing quasicrystal structures with well-established analytical tools, including common notions like Brillouin zones and Bloch's theorem. New and unique features such as fractal-like band structures and 'phason' degrees of freedom are introduced. In general, it is very difficult to directly observe the evolution of electronic waves in solid-state atomic quasicrystals, or the dynamics of the structure itself. Here we use optical induction to create two-dimensional photonic quasicrystals, whose macroscopic nature allows us to explore wave transport phenomena. We demonstrate that light launched at different quasicrystal sites travels through the lattice in a way equivalent to quantum tunnelling of electrons in a quasiperiodic potential. At high intensity, lattice solitons are formed. Finally, we directly observe dislocation dynamics when crystal sites are allowed to interact with each other. Our experimental results apply not only to photonics, but also to other quasiperiodic systems such as matter waves in quasiperiodic traps, generic pattern-forming systems as in parametrically excited surface waves, liquid quasicrystals, and the more familiar atomic quasicrystals.

Journal Article↗

Binding and functional properties of four extrinsic proteins of photosystem II from a red alga, Cyanidium caldarium, as studied by release-reconstitution experiments.

Photosystem II (PSII) from a red alga, Cyanidium caldarium, contains four extrinsic proteins of 33, 20, and 12 kDa and cytochrome (cyt)c550 [Enami, I., et al., (1995) Biochim. Biophys. Acta 1232, 208-216]. The binding and functional properties of these four proteins in the red algal PSII were studied by release-reconstitution experiments. Of the four components, the 33 kDa protein binds to PSII completely by itself, and the 20 kDa protein binds to a level 61% of that in native PSII in the absence of other proteins. In contrast, cyt c550 and the 12 kDa protein cannot bind to PSII efficiently by themselves; their effective binding requires the other three extrinsic proteins. In particular, a strong interaction was observed between cyt c550 and the 12 kDa protein, and a weaker interaction was observed between cyt c550 and the 20 kDa protein. While binding of the 33 kDa protein alone or cyt c550 and the 12 kDa protein in the presence of the 33 and/or the 20 kDa protein generally enhanced oxygen evolution, binding of the 20 kDa protein did not. Oxygen evolution was strongly dependent on Ca2+ and Cl- in the absence of cyt c550 and the 12 kDa protein, suggesting that these two proteins have functions similar to those of the 23 and 17 kDa proteins in higher plant PSII. From these results, we propose that the unique 20 kDa extrinsic protein found only in the red algal PSII functions in maintaining the proper binding of cyt c550 and the 12 kDa protein but is not involved directly in oxygen evolution. The binding and functional properties of these four proteins were compared with those of the three extrinsic proteins found in cyanobacterial and higher plant PSII in an evolutionary point of view.

Cytochrome c Group↗

Quantitative genetics of age at reproduction in wild swans: support for antagonistic pleiotropy models of senescence.

Why do individuals stop reproducing after a certain age, and how is this age determined? The antagonistic pleiotropy theory for the evolution of senescence predicts that increased early-life performance should be accompanied by earlier (or faster) senescence. Hence, an individual that has started to breed early should also lose its reproductive capacities early. We investigate here the relationship between age at first reproduction (AFR) and age at last reproduction (ALR) in a free-ranging mute swan (Cygnus olor) population monitored for 36 years. Using multivariate analyses on the longitudinal data, we show that both traits are strongly selected in opposite directions. Analysis of the phenotypic covariance between these characters shows that individuals vary in their inherent quality, such that some individuals have earlier AFR and later ALR than expected. Quantitative genetic pedigree analyses show that both traits possess additive genetic variance but also that AFR and ALR are positively genetically correlated. Hence, although both traits display heritable variation and are under opposing directional selection, their evolution is constrained by a strong evolutionary tradeoff. These results are consistent with the theory that increased early-life performance comes with faster senescence because of genetic tradeoffs.

Aging↗

[Development of spondylodiscopathies in ankylosing spondylitis].

This multicentric study concerns 43 cases of spondylodiscopathies considered, as far as evolution is concerned, according to their radiological aspect. Late erosive forms (33 cases) occur on a rigid spine, sometimes after a trauma (6 cases). The initial radiological sign may be the fracture of a syndesmophyte or of the posterior arch. The evolution of the signs (pinching, erosions, density) is variable: slow or rapid aggravation leading sometimes to an osteosynthesis, extended stabilization over several years, cure by presence of a syndesmophyte or a bony block which, beside an obvious mechanical etiology in most cases, predicts the intervention of an inflammatory factor, isolated or concomitant. Early erosive forms (3 cases) occur in a context of inflammation, on a healthy spine, and sometimes are multifocal and lead rapidly to the formation of bony blocks: they join directly in the evolution of ankylosing spondylarthritis. Pseudo-Pott and pseudo-dystrophic forms (7 cases) present a variable evolution and their interpretation remains debatable.

Adult↗

[Sequences resembling fragments of mitochondrial DNA in the human genome: features of evolution].

Mitochondrial-like sequences and their homologues from primate mitochondria are investigated to define direction and rate of evolution, time of integration into nuclear genome. The analysis showed that mito-like sequences differ from mitochondrial homologues by high level of symmetria of two chains of DNA. Besides that, difference between mito-like and Homo sapiens sequences in their GC-contents is found. Apparently there is GC-pressure of nuclear genome region, being the place of integration of mito-like sequence, that brings about equalization of GC-contents in nuclear region and mito-like sequences. Properties of descent mitochondrial sequence play important role in the difference of mito-like and Homo sapiens sequences also.

Base Composition↗

The interaction between developmental bias and natural selection: from centipede segments to a general hypothesis.

Do limitations to the ways in which mutations can alter developmental processes help to determine the direction of phenotypic evolution? In the early days of neo-Darwinism, the answer given to this question was an emphatic 'no'. However, recent work, both theoretical and empirical, argues that the answer should at least be 'sometimes', and possibly even a straightforward 'yes'. Here, I examine the key concept of developmental bias, which encompasses both developmental constraint and developmental drive. I review the case of centipede segment number, which is a particularly clear example of developmental bias, but also a rather unusual one. I then consider how, in general terms, developmental bias and natural selection might interact, with the result that it is their interaction, rather than either process on its own, that determines evolutionary direction. Essentially, the whole argument is about the extent to which phenotypic variation is developmentally structured as opposed to amorphous or random. This issue can be traced back to the very beginning of evolutionary biology, and in particular to a difference of opinion between Darwin and Wallace, who emphasized, respectively, character correlation and character independence.

Animals↗

Adaptive Evolution for Freshwater Adaptation in Coilia nasus by Directional Selection on Osmoregulation Genes.

The molecular mechanisms underlying the adaptation to freshwater habitats in fish of marine origin remain unclear. Grenadier anchovies, such as Coilia nasus, originate from marine environments and include both anadromous and freshwater-resident conspecifics, making them ideal for studying adaptive evolution from marine to freshwater habitats. We conducted a comparative population genomic and transcriptome analysis of two distinct C. nasus lineages, one anadromous and the other freshwater-resident, collected from mainstream and estuarine regions of the Yangtze River, China. By genome-wide genotyping of the anadromous and the freshwater-resident populations, we observed significant divergence in osmoregulation, energy metabolism, and immune response pathways associated with ecological adaptation and energy expenditure for migration. Some ion transport genes such as CAMK1, ATP1α3, KCNJ1 and SLC30A2 were identified that may contribute to freshwater adaptation. Notably, numerous mineralocorticoid signalling genes (e.g., NR3C2, SGK1, ATP1α3, KCNJ1) exhibit dynamic change between the anadromous and freshwater populations, suggesting an important role for the hormone cortisol in regulating salinity acclimation in euryhaline fish. Among these genes, the ion channel ATP1α3 experienced adaptive amino acid substitutions (Val317Ile and Thr329Ser), which appear to be evolutionary hotspots across migratory species based on ortholog comparisons. These variants may facilitate sodium/potassium transport and highlight salinity tolerance as a key driver of divergence in anadromous fish transitioning to freshwater. These results enhance our understanding of the genetic basis underlying freshwater adaptation for an anadromous fish across osmotic boundaries.

Animals↗

Evolutionary genetics and infertility.

PROBLEM: Mapping the human genome and advances in human evolution indicate a critical role for genetics in the study of reproduction. METHOD OF STUDY: Literature in human evolution, genetics and reproduction. RESULTS: This paper will focus on three points: (1) the course of primate evolution, (2) implications of this course for reproduction in humans, and (3) evolutionary mechanisms. Reproduction is the driving force of evolution, and sex selection is the important factor in determining reproductive activity. The hypothesis will be presented that the reproductive inefficiency of Homo sapiens (one of four pregnancies succeeds) is the consequence of the development of genetic isolation from other species of Homo that was necessary to drive the evolution of Homo sapiens. This hypothesis is based on the evidence that Homo sapiens and Homo neanderthalensis are separate species and that intermating would not yield fertile offspring (Haldane's Rule). This mating barrier involves zoological and linguistic differences and genetic mechanisms preventing fertile interspecies mating (chromosomal incompatibilities, disruption of genomic imprinting and recessive lethal defects). CONCLUSIONS: The medical and philosophical implications of modern reproductive technologies that may circumvent mating barriers must be addressed prospectively: propagation of genetic defects that would be eliminated by natural selection; the specter of 'genetic enhancement'; human cloning; and attempts to control the future direction of the evolution of Homo sapiens.

Animals↗

Oliver Memorial Lecture 1989. The evolution and future of haemophilia therapy.

Lane (1840) first noted the beneficial effect of blood transfusion in controlling haemophilic bleeding following ophthalmic surgery. The appreciation that haemophilia is due to a plasma defect, at first thought to be prothrombin, coincided with the discovery of blood groups. This led in due course to the discovery of citrate anti-coagulant and the ability to store blood. The beneficial effect of citrated plasma in haemophilia led to the exploitation of stored blood, fresh frozen plasma, and the subsequent development of cryoprecipitate and factor concentrates. All this would not have been possible, however, without the selfless contribution of blood donors and the development of an organized blood transfusion service. In the United Kingdom, P. L. Oliver pioneered the development of blood donor panels, the London Blood Transfusion Service and the British Red Cross Society Blood Transfusion Service leading directly to the National Blood Transfusion Service; recognized as the World's senior service. The development of haemophilia therapy owes much, therefore, to Oliver's energetic and pioneering work and it is entirely appropriate that the first Oliver Memorial Lecture be directed to the evolution and future of haemophilia therapy. It is indeed an honour to be invited to deliver this Oliver Memorial Lecture at the combined meeting of the British Blood Transfusion Society and the British Society for Haematology here in Wembley.

Animals↗

Spreading of liquid drops over dry porous layers: complete wetting case.

Spreading of small liquid drops over thin dry porous layers is investigated from both theoretical and experimental points of view. Drop motion over a porous layer is caused by an interplay of two processes: (a) the spreading of the drop over already saturated parts of the porous layer, which results in an expanding of the drop base; (b) the imbibition of the liquid from the drop into the porous substrate, which results in a shrinkage of the drop base and an expanding of the wetted region inside the porous layer. As a result of these two competing processes, the radius of the drop goes through a maximum value over time. A system of two differential equations is derived to describe the evolution with time of radii of both the drop base and the wetted region inside the porous layer. This system includes two parameters: one accounts for the effective lubrication coefficient of the liquid over the wetted porous substrate and the other is a combination of permeability and effective capillary pressure inside the porous layer. Two additional experiments are used for an independent determination of these two parameters. The system of differential equations does not include any fitting parameter after these two parameters are determined. Experiments were carried out on the spreading of silicone oil drops over various dry microfiltration membranes (permeable in both normal and tangential directions). The time evolution of the radii of both the drop base and the wetted region inside the porous layer are monitored. All experimental data fell on two universal curves if appropriate scales are used with a plot of the dimensionless radii of the drop base and of the wetted region inside the porous layer on dimensionless time. The predicted theoretical relationships are two universal curves accounting quite satisfactorily for the experimental data. According to our theory prediction, (i) the dynamic contact angle dependence on the same dimensionless time as before should be a universal function and (ii) the dynamic contact angle should change rapidly over an initial short stage of spreading and should remain a constant value over the duration of the rest of the spreading process. The constancy of the contact angle on this stage has nothing to do with hysteresis of the contact angle: there is no hysteresis in our system. These conclusions again are in good agreement with our experimental observations.

Journal Article↗

Surfactant solutions and porous substrates: spreading and imbibition.

In Section 1, spreading of small liquid drops over thin dry porous layers is investigated from both theoretical and experimental points of view [V.M. Starov, S.R. Kosvintsev, V.D. Sobolev, M.G. Velarde, S.A. Zhdanov, J. Colloid Interface Sci. 252 (2002) 397]. Drop motion over a porous layer is caused by an interplay of two processes: (a) the spreading of the drop over already saturated parts of the porous layer, which results in an expanding of the drop base, and (b) the imbibition of the liquid from the drop into the porous substrate, which results in a shrinkage of the drop base and an expanding of the wetted region inside the porous layer. As a result of these two competing processes, the radius of the drop goes through a maximum value over time. A system of two differential equations has been derived to describe the evolution with time of radii of both the drop base and the wetted region inside the porous layer. This system includes two parameters, one accounts for the effective lubrication coefficient of the liquid over the wetted porous substrate, and the other is a combination of permeability and effective capillary pressure inside the porous layer. Two additional experiments were used for an independent determination of these two parameters. The system of differential equations does not include any fitting parameter after these two parameters are determined. Experiments were carried out on the spreading of silicone oil drops over various dry microfiltration membranes (permeable in both normal and tangential directions). The time evolution of the radii of both the drop base and the wetted region inside the porous layer were monitored. All experimental data fell on two universal curves if appropriate scales are used with a plot of the dimensionless radii of the drop base and of the wetted region inside the porous layer on dimensionless time. The predicted theoretical relationships are two universal curves accounting quite satisfactory for the experimental data. According to theory predictions [1]: (i) the dynamic contact angle dependence on the same dimensionless time as before should be a universal function, and (ii) the dynamic contact angle should change rapidly over an initial short stage of spreading and should remain a constant value over the duration of the rest of the spreading process. The constancy of the contact angle on this stage has nothing to do with hysteresis of the contact angle: there is no hysteresis in the system under investigation. These conclusions again are in good agreement with experimental observations [V.M. Starov, S.R. Kosvintsev, V.D. Sobolev, M.G. Velarde, S.A. Zhdanov, J. Colloid Interface Sci. 252 (2002) 397]. In Section 2, experimental investigations are reviewed on the spreading of small drops of aqueous SDS solutions over dry thin porous substrates (nitrocellulose membranes) in the case of partial wetting [S. Zhdanov, V. Starov, V. Sobolev, M. Velarde, Spreading of aqueous SDS solutions over nitrocellulose membranes. J. Colloid Interface Sci. 264 (2003) 481-489]. The time evolution was monitored of the radii of both the drop base and the wetted area inside the porous substrate. The total duration of the spreading process was subdivided into three stages-the first stage: the drop base expands until the maximum value of the drop base is reached; the contact angle rapidly decreases during this stage; the second stage: the radius of the drop base remains constant and the contact angle decreases linearly with time; the third stage: the drop base shrinks and the contact angle remains constant. The wetted area inside the porous substrate expends during the whole spreading process. Appropriate scales were used with a plot of the dimensionless radii of the drop base, of the wetted area inside the porous substrate, and the dynamic contact angle on the dimensionless time. Experimental data showed [S. Zhdanov, V. Starov, V. Sobolev, M. Velarde, Spreading of aqueous SDS solutions over nitrocellulose membranes. J. Colloid Interface Sci. 264 (2003) 481-489]: the overall time of the spreading of drops of SDS solution over dry thin porous substrates decreases with the increase of surfactant concentration; the difference between advancing and hydrodynamic receding contact angles decreases with the surfactant concentration increase; the constancy of the contact angle during the third stage of spreading has nothing to do with the hysteresis of contact angle, but determined by the hydrodynamic reasons. It is shown using independent spreading experiments of the same drops on nonporous nitrocellulose substrate that the static receding contact angle is equal to zero, which supports the conclusion on the hydrodynamic nature of the hydrodynamic receding contact angle on porous substrates. In Section 3, a theory is developed to describe a spontaneous imbibition of surfactant solutions into hydrophobic capillaries, which takes into account the micelle disintegration and the concentration decreasing close to the moving meniscus as a result of adsorption, as well as the surface diffusion of surfactant molecules [N.V. Churaev, G.A. Martynov, V.M. Starov, Z.M. Zorin, Colloid Polym. Sci. 259 (1981) 747]. The theory predictions are in good agreement with the experimental investigations on the spontaneous imbibition of the nonionic aqueous surfactant solution, Syntamide-5, into hydrophobized quartz capillaries. A theory of the spontaneous capillary rise of surfactant solutions in hydrophobic capillaries is presented, which connects the experimental observations with the adsorption of surfactant molecules in front of the moving meniscus on the bare hydrophobic interface [V.J. Starov, Colloid Interface Sci. 270 (2003)]. In Section 4, capillary imbibition of aqueous surfactant solutions into dry porous substrates is investigated from both theoretical and experimental points of view in the case of partial wetting [V. Straov, S. Zhdanov, M. Velarde, J. Colloid Interface Sci. 273 (2004) 589]. Cylindrical capillaries are used as a model of porous media for theoretical treatment of the problem. It is shown that if an averaged pore size of the porous medium is below a critical value, then the permeability of the porous medium is not influenced by the presence of surfactants at any concentration: the imbibition front moves exactly in the same way as in the case of the imbibition of the pure water. The critical radius is determined by the adsorption of the surfactant molecules on the inner surface of the pores. If an averaged pore size is bigger than the critical value, then the permeability increases with surfactant concentration. These theoretical conclusions are in agreement with experimental observations. In Section 5, the spreading of surfactant solutions over hydrophobic surfaces is considered from both theoretical and experimental points of view [V.M. Starov, S.R. Kosvintsev, M.G. Velarde, J. Colloid Interface Sci. 227 (2000) 185]. Water droplets do not wet a virgin solid hydrophobic substrate. It is shown that the transfer of surfactant molecules from the water droplet onto the hydrophobic surface changes the wetting characteristics in front of the drop on the three-phase contact line. The surfactant molecules increase the solid-vapor interfacial tension and hydrophilise the initially hydrophobic solid substrate just in front of the spreading drop. This process causes water drops to spread over time. The time of evolution of the spreading of a water droplet is predicted and compared with experimental observations. The assumption that surfactant transfer from the drop surface onto the solid hydrophobic substrate controls the rate of spreading is confirmed by experimental observations. In Section 6, the process of the spontaneous spreading of a droplet of a polar liquid over solid substrate is analyzed in the case when amphiphilic molecules (or their amphiphilic fragments) of the substrate surface layer are capable of overturning, resulting in a partial hydrophilisation of the surface [V.M. Starov, V.M. Rudoy, V.I. Ivanov, Colloid J. (Russian Academy of Sciences English Transaction) 61 (3) (1999) 374]. Such a situation may take place, for example, during contact of an aqueous droplet with the surface of a polymer whose macromolecules have hydrophilic side groups capable of rotating around the backbone and during the wetting of polymers containing surface-active additives or Langmuir-Blodgett films composed of amphiphilic molecules. It was shown that droplet spreading is possible only if the lateral interaction between neighbouring amphiphilic molecules (or groups) takes place. This interaction results in the tangential transfer of "the overturning state" to some distance in front of the advancing three-phase contact line making it partially hydrophilic. The quantitative theory describing the kinetics of droplet spreading is developed with allowance for this mechanism of self-organization of the surface layer of a substrate in the contact with a droplet.

Biophysical Phenomena↗

Spreading of liquid drops over porous substrates.

The spreading of small liquid drops over thin and thick porous layers (dry or saturated with the same liquid) has been investigated in the case of both complete wetting (silicone oils of different viscosities) and partial wetting (aqueous SDS solutions of different concentrations). Nitrocellulose membranes of different porosity and different average pore size have been used as a model of thin porous layers, glass and metal filters have been used as a model of thick porous substrates. The first problem under investigation has been the spreading of small liquid drops over thin porous layers saturated with the same liquid. An evolution equation describing the drop spreading has been deduced, which showed that both an effective lubrication and the liquid exchange between the drop and the porous substrates are equally important. Spreading of silicone oils over different nitrocellulose microfiltration membranes was carried out. The experimental laws of the radius of spreading on time confirmed the theory predictions. The spreading of small liquid drops over thin dry porous layers has also been investigated from both theoretical and experimental points of view. The drop motion over a dry porous layer appears caused by the interplay of two processes: (a). the spreading of the drop over already saturated parts of the porous layer, which results in a growth of the drop base, and (b). the imbibition of the liquid from the drop into the porous substrate, which results in a shrinkage of the drop base and a growth of the wetted region inside the porous layer. As a result of these two competing processes the radius of the drop base goes through a maximum as time proceeds. A system of two differential equations has been derived to describe the time evolution of the radii of both the drop base and the wetted region inside the porous layer. This system includes two parameters, one accounts for the effective lubrication coefficient of the liquid over the wetted porous substrate, and the other is a combination of permeability and effective capillary pressure inside the porous layer. Two additional experiments were used for an independent determination of these two parameters. The system of differential equations does not include any fitting parameter after these two parameters were determined. Experiments were carried out on the spreading of silicone oil drops over various dry nitrocellulose microfiltration membranes (permeable in both normal and tangential directions). The time evolution of the radii of both the drop base and the wetted region inside the porous layer was monitored. In agreement with our theory all experimental data fell on two universal curves if appropriate scales were used with a plot of the dimensionless radii of the drop base and of the wetted region inside the porous layer using a dimensionless time scale. Theory predicts that (a). the dynamic contact angle dependence on the dimensionless time should be a universal function, (b). the dynamic contact angle should change rapidly over an initial short stage of spreading and should remain a constant value over the duration of the rest of the spreading process. The constancy of the contact angle on this stage has nothing to do with hysteresis of the contact angle: there is no hysteresis in our system. These predictions are in the good agreement with our experimental observations. In the case of spreading of liquid drops over thick porous substrates (complete wetting) the spreading process goes in two similar stages as in the case of thin porous substrates. In this case also both the drop base and the radii of the wetted area on the surface of the porous substrates were monitored. Spreading of oil drops (with a wide range of viscosities) on dry porous substrates having similar porosity and average pore size shows universal behavior as in the case of thin porous substrates. However, the spreading behavior on porous substrates having different average pore sizes deviates from the universal behavior. Yet, even in this case the dynamic contact angle remains constant over the duration of the second stage of spreading as in the case of spreading on thin porous substrates. Finally, experimental observations of the spreading of aqueous SDS solution over nitrocellulose membranes were carried out (case of partial wetting). The time evolution of the radii of both the drop base and the wetted area inside the porous substrate was monitored. The total duration of the spreading process was subdivided into three stages: in the first stage the drop base growths until a maximum value is reached. The contact angle rapidly decreases during this stage; in the second stage the radius of the drop base remains constant and the contact angle decreases linearly with time; finally in the third stage the drop base shrinks while the contact angle remains constant. The wetted area inside the porous substrate expands during the whole spreading process. Appropriate scales were used to have a plot of the dimensionless radii of the drop base, of the wetted area inside the porous substrate, and the dynamic contact angle vs. the dimensionless time. Our experimental data show: the overall time of the spreading of drops of SDS solutions over dry thin porous substrates decreases with the increase of surfactant concentration; the difference between advancing and hydrodynamic receding contact angles decreases with the surfactant concentration increase; the constancy of the contact angle during the third stage of spreading has nothing to do with the hysteresis of contact angle, but determined by the hydrodynamics. Using independent spreading experiments of the same drops on a non-porous nitrocellulose substrate we have shown that the static receding contact angle is equal to zero, which supports our conclusion on the hydrodynamic nature of the hydrodynamic receding contact angle on porous substrates.

Biophysical Phenomena↗

How many processed pseudogenes are accumulated in a gene family?

A simple kinetic model is developed that describes the accumulation of processed pseudogenes in a functional gene family. Insertion of new pseudogenes occurs at rate v per gene and is countered by spontaneous deletion (at rate delta per DNA segment) of segments containing processed pseudogenes. If there are k functional genes in a gene family, the equilibrium number of processed pseudogenes is k(v/delta), and the percentage of functional genes in the gene family at equilibrium is 1/[1 + (v/delta)]. v/delta values estimated for five gene families ranged from 1.7 to 15. This fairly narrow range suggests that the rates of formation and deletion of processed pseudogenes may be positively correlated for these families. If delta is sufficiently large relative to the per nucleotide mutation rate mu (delta greater than 20 mu), processed pseudogenes will show high homology with each other, even in the absence of gene conversion between pseudogenes. We argue that formation of processed pseudogenes may share common pathways with transposable elements and retroviruses, creating the potential for correlated responses in the evolution of processed pseudogenes due to direct selection for control of transposable elements and/or retroviruses. Finally, we discuss the nature of the selective forces that may act directly or indirectly to influence the evolution of processed pseudogenes.

Animals↗

Spoligotype signatures in the Mycobacterium tuberculosis complex.

Evolution of the direct repeat region in Mycobacterium tuberculosis has created unique spoligotype signatures specifically associated with IS6110-defined strain families. Spoligotyping signatures may enable the analysis of the strain population structure in different settings and will enable the rapid identification of strain families that acquire drug resistance or escape protective immunity in drug and vaccine trials.

Bacterial Typing Techniques↗

The evolution of virulence in vector-borne and directly transmitted parasites.

Ewald (1994) has suggested that vector-borne parasites are expected to evolve a higher level of host exploitation than directly transmitted parasites, and this should thereby result in them being more virulent. Indeed, some data do conform to this general pattern. Nevertheless, his hypothesis has generated some debate about the extent to which it is valid. I explore this issue quantitatively within the framework of mathematical epidemiology. In particular, I present a dynamic optimization model for the evolution of parasite replication strategies that explicitly explores the validity of this hypothesis. A few different model assumptions are explored and it is found that Ewald's hypothesis has only qualified support as a general explanation for why vector-borne parasites are more virulent than those that are directly transmitted. I conclude by suggesting that an alternative explanation might lie in differences in inoculum size between these two types of transmission.

Animals↗

Gene dosage compensation and the evolution of sex chromosomes.

Dosage compensation is a mechanism by means of which the activity of X-linked or Z-linked genes is made equal in the two sexes of organisms with an XX compared to XY or ZZ compared to ZW basis of sex determination. In mammals, compensation is achieved by the inactivation of one X chromosome in somatic cells of females. In Drosophila, compensation does not involve inactivation. The two X chromosomes in females as well as the single X in males are regulated, and individual genes are thought to respond independently to the regulatory mechanism. It is proposed that in both groups of organisms the evolution of heteromorphic sex chromosomes was gradual and occurred as the direct result of the evolution of dosage compensation rather than the reverse.

Alleles↗