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Results for “computational design”

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At least 1,135 records · Page 63Linked to original sources
PubMed1997

[The design and application of a computer aided system for measuring the electroencephalographic effect].

A new computer system (including hardware and software design) was developed which could be used to record and analyze the electroencephalographic (EEG) signal. The EEG analog signal of four channels was first digitized at a sampling rate of 960 Hz through analog to digital converter and then stored in the Sun-386 computer for off-line analysis. Various EEG effect parameters were then generated from the aperiodic waveform analysis files, i.e., total number of waves/s and total voltage/s in various frequency ranges 1-3, 4-7, 4-11, and 12-30 Hz. From various EEG parameters derived from computer system, the total number or voltage in 12-30 Hz (TNW12-30, TV12-30) was considered as the best descriptor of EEG effect.

Anti-Anxiety Agents↗
PubMed1979

Computer simulation as a tool for clinical trial design.

Use of a computer simulation technique as a tool for optimising the design of a clinical trial is described. One of several aspects of trial design facilitated by use of the technique is the estimation of the number of patients required in the trial. The simulation tool provides the basis for structured and disciplined discussion of all the issues to be considered in designing a trial. Copies of the simulation program are available from the author.

Clinical Trials as Topic↗
PubMedDate not supplied

[Design principles, structure, and specific features of kardiovid computer diagnostic system].

The design principles and hardware implementation of Kardiovid computer diagnostic system are considered. The system is intended for diagnosis of the state of cardiovascular system on the basis of the results of electrocardiographic and fluorographic examinations. It provides simulation and visualization of the state of cardiovascular system.

Cardiovascular Diseases↗
PubMed1994

A CAD analysis programme for prosthetics and orthotics.

A CAD (computer aided design) analysis software package (CADVIEW) was designed for use with prosthetic and orthotic CAD CAM (computer aided design/computer aided manufacture) systems. Using the Microsoft Windows 3.1 environment, CADVIEW provides a series of anatomical shape viewing and analysis tools. These tools include simultaneous display of multiple sockets and multiple views, two dimensional (2D) and three dimensional (3D) measurement, shape statistics, multi-shape alignment, cross-sectional comparison, colour coded 3D comparison, resolution enhancement, and image copying capabilities. This programme should be of benefit to clinicians and researchers who wish to assess and/or compare CAD data generated by MS-DOS based CAD CAM systems.

Computer-Aided Design↗
PubMed1986

Computer-assisted diagnosis of acute azotemia.

We designed a computer program to make diagnostic suggestions in cases of acute azotemia. The performance of the program was tested in a retrospective manner on 63 patients with acute azotemia. The program correctly identified 90 of 94 diagnoses and made 20 false positive diagnostic suggestions. A revised version of the program correctly identified 94 of 94 diagnoses and made 4 false negative suggestions. The justification for this kind of diagnostic aid is discussed.

Artificial Intelligence↗
PubMed1996

Assignment of protein disulphides by a computer method using mass spectrometric data.

We designed a computer program for the assignment of protein disulphides using mass spectrometric data. All the theoretical linear peptides containing from one to three cysteines are generated on the basis of the protein sequence. Their combination ways are determined in order to create all the possible disulphide-bridged fragments containing from two to six cysteines and to calculate their molecular weight. One, two and three S-S bridges per linked fragment were considered, taking into account the possibility that the fragments contain unabridged residues. The mass data obtained from the spectral analysis of peptide mixtures of the digested protein are then associated to the fitting structures of disulphide-bridged peptides, giving rise to the primary output. This output can then be screened by using information on the specificity of the proteolytic agent(s) used and/or any further mass data provided by Edman degradation and/or carboxypeptidase treatment of the peptide mixtures. The need for such a computer aid is discussed and examples of application are given.

Amino Acid Sequence↗
PubMed2005

Receptor flexibility in de novo ligand design and docking.

One of the major problems in computational drug design is incorporation of the intrinsic flexibility of protein binding sites. This is particularly crucial in ligand binding events, when induced fit can lead to protein structure rearrangements. As a consequence of the huge conformational space available to protein structures, receptor flexibility is rarely considered in ligand design procedures. In this work, we present an algorithm for integrating protein binding-site flexibility into de novo ligand design and docking processes. The approach allows dynamic rearrangement of amino acid side chains during the docking and design simulations. The impact of protein conformational flexibility is investigated in the docking of highly active inhibitors in the binding sites of acetylcholinesterase and human collagenase (matrix metalloproteinase-1) and in the design of ligands in the S1' pocket of MMP-1. The results of corresponding simulations for both rigid and flexible binding sites are compared in order to gauge the influence of receptor flexibility in drug discovery protocols.

Acetylcholinesterase↗
PubMed1991

An interactive computer graphics system for the design of molded and orthopedic shoe lasts.

The Department of Computer Science at North Carolina State University, with support from the Department of Veterans Affairs and National Aeronautics and Space Administration (NASA) Langley Research Center, has developed an interactive graphics program for the development of shoe lasts from digitized images of feet or digitized images of commercial shoe lasts. The program runs on a Sun 3/260 computer with a TAAC-1 graphics accelerator. The program contains operations for region addition and deletion, techniques for narrowing the ankle area, methods for toe extension, operations to allow for shoe inserts, etc. Once the operations by the user are complete, the program will resample the resulting last in a 512 x 512 array. The user is then allowed to select an error tolerance which will guide a data reduction program to represent the last as Coons patches. These patches are then transmitted to a milling machine which will cut the last.

Computer Graphics↗
PubMed1984

Using the desk top computer in cellular toxicity and mutagenesis.

A series of programs applicable to in vitro test symptoms in environmental toxicology are described for the Tektronix 4050 series graphic system computer. The file structure, experimental design and identification, the program library, data entry program, and programs to compile data from separate experiments are presented. Experimental design information and test data are stored on magnetic tape. The programs are designed to compute cell number and viability, adenosine triphosphate level, and protein and DNA synthetic activity from raw data obtained from cellular toxicity experiments; and cloning efficiency, mutation yield, mutation frequency, and other parameters for mutagenicity. A set of subprograms can be used for statistical analysis of the data and for construction of frequency distributions. The applicability of the programs is illustrated by data obtained from exposure of Chinese hamster ovary cells to cadmium chloride or N-methyl-N'-nitro-N-nitroso-guanidine.

Animals↗
PubMed1995

Application of multivariate cluster, discriminate function, and stepwise regression analyses to variable selection and predictive modeling of sperm cryosurvival.

OBJECTIVE: To develop a mathematical model that predicts sperm cryodamage based on the kinematic characteristics of seminal sperm as detected by computer-aided sperm analysis (CASA). DESIGN: Computer-aided sperm analysis was performed on donor semen before and after freezing. An iterative multivariate statistical analysis technique was developed to identify sperm subpopulations and to select the best variables for modeling. Stepwise, multivariate regression was performed on the selected subpopulations to predict the post-thaw percentage of motile sperm from prefreeze kinematic values. SETTING: Andrology laboratories, IVF laboratories, and sperm cryobanks. PARTICIPANTS: Semen donors in an academic research environment. MAIN OUTCOME MEASURES: Identification of predictive kinematic variables; number of sperm subpopulations per sample; number of kinematic variables per subpopulation; prediction error for subpopulation membership; and an equation for prediction of post-thaw percentage of motile sperm from prefreeze CASA variables. RESULTS: The number of subpopulations for each specimen was predicted by 3 to 5 kinematic variables. Straight-line velocity (VSL) and linearity were the most commonly predictive primary variables, whereas curvilinear velocity and amplitude of lateral head displacement were the most commonly predictive secondary variables. The best linear model predicted the post-thaw percentage of motile sperm from the difference in VSL between the subpopulation with the highest value and the subpopulation with the lowest value in each prefreeze specimen. CONCLUSIONS: A small number of consistent kinematic variables accurately described physiologic subpopulations of sperm in prefreeze and post-thaw specimens from different men. An equation based on the characteristics of these subpopulations predicts the post-thaw percentage of motile sperm (i.e., sperm recovery) from simple prefreeze kinematic variables. This equation could improve specimen screening by eliminating the requirements for freezing and thawing in order to identify a specimen's vulnerability to cryodamage.

Cell Survival↗
PubMed2002

Design, development and optimisation using computational fluid dynamics.

Interest in more advanced drug delivery systems has increased with an acceleration in the discovery and development of novel therapeutic macromolecules for targeted applications. Computational fluid dynamics is a design tool that allows designers of these and other products to evaluate different designs rapidly and cost-effectively.

Drug Delivery Systems↗
PubMed2006

The impact of computer display height and desk design on 3D posture during information technology work by young adults.

Computer display height and desk design to allow forearm support are two critical design features of workstations for information technology tasks. However there is currently no 3D description of head and neck posture with different computer display heights and no direct comparison to paper based information technology tasks. There is also inconsistent evidence on the effect of forearm support on posture and no evidence on whether these features interact. This study compared the 3D head, neck and upper limb postures of 18 male and 18 female young adults whilst working with different display and desk design conditions. There was no substantial interaction between display height and desk design. Lower display heights increased head and neck flexion with more spinal asymmetry when working with paper. The curved desk, designed to provide forearm support, increased scapula elevation/protraction and shoulder flexion/abduction.

Adolescent↗
PubMed2002

Computer environments for children: a review of design issues.

Ergonomic design considerations for computer use in schools are reviewed. Evidence for the postural effects of ergonomic furniture from worldwide studies is evaluated. Issues of furniture sizing and allocation methods are discussed. The limited evidence for effects of input device design on schoolchildren is summarized. Future directions for ergonomic research studies are presented.

Adolescent↗
PubMed2005

Tissue engineering of vascular conduits: fabrication of custom-made scaffolds using rapid prototyping techniques.

BACKGROUND: The technique of stereolithography, which automatically fabricates models from X-ray computed tomography or magnetic resonance imaging (MRI) data linked to computer-aided design programs, has been applied to the fabrication of scaffolds for tissue engineering. We previously reported on the application of stereolithography in scaffold fabrication of a trileaflet heart valve. In our current experiment we demonstrate a new technique for the fabrication of custom-made conduits for the potential replacement of a coarcted aortic segment. METHODS AND RESULTS: In this experiment the image data derived from a 12-year-old male patient with aortic coarctation scanned by MRI were processed by a computer-aided design program to reconstruct the aortic arch with isthmus stenosis three dimensionally. By defining the stenotic section and the adjacent normal vessel a custom-made nonstenotic descending aorta was reconstructed to replace the stenosed part. The rapid prototyping technique was used to establish stereolithographic models for fabricating biocompatible and biodegradable vascular scaffolds with the anatomic structure of the recalculated human descending aorta through a thermal processing technique. CONCLUSION: Our results suggest that the re-creation and reproduction of complex vascular structures by computer-aided design techniques may be useful to fabricate custom-made polymeric scaffolds for the tissue engineering of living vascular prostheses.

Aortic Coarctation↗
PubMed2005

Computational methods for the design of effective therapies against drug resistant HIV strains.

The development of drug resistance is a major obstacle to successful treatment of HIV infection. The extraordinary replication dynamics of HIV facilitates its escape from selective pressure exerted by the human immune system and by combination drug therapy. We have developed several computational methods whose combined use can support the design of optimal antiretroviral therapies based on viral genomic data.

Database Management Systems↗
PubMed1994

Warfarin 2.0--a computer program for warfarin management. Design and clinical use.

Warfarin 2.0 is a computer program that helps physicians optimize treatment of outpatients with warfarin. The main reason for its development was to achieve a good anticoagulation level, avoiding both undertreatment--which causes thromboembolic complications--and overtreatment--which causes hemorrhagic complications. The program was also designed to help educate the anticoagulated patient, standardize warfarin management and audit results of what had been done. The philosophy of continuous quality improvement was applied. Warfarin 2.0 is in clinical operation in the University Hospital, Montevideo, Uruguay, and it has also been used since the end of 1993 in the Favaloro Foundation, Dept. of Hematology, Buenos Aires, Argentina. The results from the first 15 months of use in Montevideo showed an increase in the number of patients being followed (from 91 to 132) and the average number of visits per patient (from one visit every 10.6 weeks to one every 6.5 weeks): The frequency of visits has been in the internationally accepted ranges since the program was implemented. Better anticoagulation levels were achieved after an adjusting period. Unfortunately, the number of undertreated patients is still large, and a thorough analysis of the data is going to be undertaken to continue improving warfarin management.

Drug Therapy, Computer-Assisted↗
PubMed2002

Energy estimation in protein design.

The progress achieved by several groups in the field of computational protein design shows that successful design methods include two major features: efficient algorithms to deal with the combinatorial exploration of sequence space and optimal energy functions to rank sequences according to their fitness for the given fold.

Algorithms↗