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Predicting soil erosion for alternative land uses.

The APEX (Agricultural Policy-Environmental eXtender) model developed in the United States was calibrated for northwestern China's conditions. The model was then used to investigate soil erosion effects associated with alternative land uses at the ZFG (Zi-Fang-Gully) watershed in northwestern China. The results indicated that the APEX model could be calibrated reasonably well (+/-15% errors) to fit those areas with >50% slope within the watershed. Factors being considered during calibration include runoff, RUSLE (Revised Universal Soil Loss Equation) slope length and steepness factor, channel capacity flow rate, floodplain saturated hydraulic conductivity, and RUSLE C factor coefficient. No changes were made in the APEX computer code. Predictions suggest that reforestation is the best practice among the eight alternative land uses (the status quo, all grass, all grain, all grazing, all forest, half tree and half grass, 70% tree and 30% grain, and construction of a reservoir) for control of water runoff and soil erosion. Construction of a reservoir is the most effective strategy for controlling sediment yield although it does nothing to control upland erosion. For every 1 Mg of crop yield, 11 Mg of soil were lost during the 30-yr simulation period, suggesting that expanding land use for food production should not be encouraged on the ZFG watershed. Grass species are less effective than trees in controlling runoff and erosion on steep slopes because trees generally have deeper and more stable root systems.

Agriculture↗

Effect of hydraulic retention time on inorganic nutrient recovery and biodegradable organics removal in a biofilm reactor treating plant biomass leachate.

A fixed-film (biofilm) reactor was designed and its performance was determined at various retention times. The goal was to find the optimal retention time for recycling plant nutrients in an advanced life support system, to minimize the size, mass, and volume (hold-up) of a production model. The prototype reactor was tested with aqueous leachate from wheat crop residue at 24, 12, 6, and 3 h hydraulic retention times (HRTs). Biochemical oxygen demand (BOD), nitrates and other plant nutrients, carbohydrates, total phenolics, and microbial counts were monitored to characterize reactor performance. BOD removal decreased significantly from 92% at the 24 h HRT to 73% at 3 h. Removal of phenolics was 62% at the 24 h retention time, but 37% at 3 h. Dissolved oxygen concentrations, nitric acid consumption, and calcium and magnesium removals were also affected by HRT. Carbohydrate removals, carbon dioxide (CO2) productions, denitrification, potassium concentrations, and microbial counts were not affected by different retention times. A 6 h HRT will be used in future studies to determine the suitability of the bioreactor effluent for hydroponic plant production.

Bacteria, Aerobic↗

A cluster of central nervous system defects in Jamaica.

1. Information was collected on all stillbirths and neonatal deaths on the island of Jamaica during the 12-month period between September 1986 and August 1987. 2. There were 33 such deaths with anencephaly, spina bifida and hydrocephalus out of an estimated 54,400 total births. 3. There was a statistically significant cluster in respect to time of conception in one small rural area of the island. 4. There were no obvious differences between parents involved in the cluster and the rest of the population, but particular Jamaican fruit and vegetables have been shown to be teratogenic in animals. It is postulated that the cluster may have been associated with an unripe crop.

Anencephaly↗

Composting of a crop residue through treatment with microorganisms and subsequent vermicomposting.

Preliminary studies were conducted on wheat straw to test the technical viability of an integrated system of composting, with bioinoculants and subsequent vermicomposting, to overcome the problem of lignocellulosic waste degradation, especially during the winter season. Wheat straw was pre-decomposed for 40 days by inoculating it with Pleurotus sajor-caju, Trichoderma harzianum, Aspergillus niger and Azotobacter chroococcum in different combinations. This was followed by vermicomposting for 30 days. Chemical analysis of the samples showed a significant decrease in cellulose, hemicellulose and lignin contents during pre-decomposition and vermicomposting. The N, P, K content increased significantly during pre-decomposition with bioinoculants. The best quality compost, based on chemical analysis, was prepared where the substrate was treated with all the four bioinoculants together followed by vermicomposting. Results indicated that the combination of both the systems reduced the overall time required for composting and accelerated the composting of ligno-cellulosic waste during the winter season besides producing a nutrient-enriched compost product.

Animals↗

Microgravity effects on water supply and substrate properties in porous matrix root support systems.

The control of water content and water movement in granular substrate-based plant root systems in microgravity is a complex problem. Improper water and oxygen delivery to plant roots has delayed studies of the effects of microgravity on plant development and the use of plants in physical and mental life support systems. Our international effort (USA, Russia and Bulgaria) has upgraded the plant growth facilities on the Mir Orbital Station (OS) and used them to study the full life cycle of plants. The Bulgarian-Russian-developed Svet Space Greenhouse (SG) system was upgraded on the Mir OS in 1996. The US developed Gas Exchange Measurement System (GEMS) greatly extends the range of environmental parameters monitored. The Svet-GEMS complex was used to grow a fully developed wheat crop during 1996. The growth rate and development of these plants compared well with earth grown plants indicating that the root zone water and oxygen stresses that have limited plant development in previous long-duration experiments have been overcome. However, management of the root environment during this experiment involved several significant changes in control settings as the relationship between the water delivery system, water status sensors, and the substrate changed during the growth cycles.

Carbon Dioxide↗

Problematic use of sustainability claims in recent scientific literature on crop gene technologies: toward improving practices and communication.

There is growing interest in the role of agricultural genomics, including biotechnology, in enhancing the "sustainability" of food production systems. However, as "sustainability" becomes more frequently linked to the goals of agricultural genomics, a critical question arises: what claims are made about "sustainability" and how is the concept of "sustainability" defined in the scholarly literature on agricultural genomics? Using a structured analysis of the recent scientific literature, this article investigates increasingly frequent claims about "sustainability," including how this term is defined and measured in the field of agricultural genomics. It argues that more transparent definitions and clearer metrics, tied to appropriate scholarly literature, are crucial for improving the coherence, impact, and credibility of research in agricultural genomics.

Crops, Agricultural↗

The threat of plant pathogens as weapons against U.S. crops.

The U.S. National Research Council (NRC) concluded in 2002 that U.S. agriculture is vulnerable to attack and that the country has inadequate plans for dealing with agricultural bioterrorism. This article addresses the vulnerability of U.S. crops to attack from biological weapons by reviewing the costs and impact of plant diseases on crops, pointing out the difficulty in preventing deliberate introduction of pathogens and discovering new disease outbreaks quickly, and discussing why a plant pathogen might be chosen as a biological weapon. To put the threat into context, a brief historical review of anti-crop biological weapons programs is given. The argument is made that the country can become much better prepared to counter bioterrorism by developing a list of likely anti-crop threat agents, or categories of agents, that is based on a formal risk analysis; making structural changes to the plant protection system, such as expanding diagnostic laboratories, networking the laboratories in a national system, and educating first responders; and by increasing our understanding of the molecular biology and epidemiology of threat agents, which could lead to improved disease control, faster and more sensitive diagnostic methods, and predictions of disease invasion, persistence, and spread following pathogen introduction.

Bioterrorism↗

Geographic model and biomarker-derived measures of pesticide exposure and Parkinson's disease.

For more than two decades, reports have suggested that pesticides and herbicides may be an etiologic factor in idiopathic Parkinson's disease (PD). To date, no clear associations with any specific pesticide have been demonstrated from epidemiological studies perhaps, in part, because methods of reliably estimating exposures are lacking. We tested the validity of a Geographic Information Systems (GIS)-based exposure assessment model that estimates potential environmental exposures at residences from pesticide applications to agricultural crops based on California Pesticide Use Reports (PUR). Using lipid-adjusted dichlorodiphenyldichloroethylene (DDE) serum levels as the "gold standard" for pesticide exposure, we conducted a validation study in a sample taken from an ongoing, population-based case-control study of PD in Central California. Residential, occupational, and other risk factor data were collected for 22 cases and 24 controls from Kern county, California. Environmental GIS-PUR-based organochlorine (OC) estimates were derived for each subject and compared to lipid-adjusted DDE serum levels. Relying on a linear regression model, we predicted log-transformed lipid-adjusted DDE serum levels. GIS-PUR-derived OC measure, body mass index, age, gender, mixing and loading pesticides by hand, and using pesticides in the home, together explained 47% of the DDE serum level variance (adjusted r(2) = 0.47). The specificity of using our environmental GIS-PUR-derived OC measures to identify those with high-serum DDE levels was reasonably good (87%). Our environmental GIS-PUR-based approach appears to provide a valid model for assessing residential exposures to agricultural pesticides.

California↗

The ecological genetics of aliphatic glucosinolates.

Glucosinolates are plant secondary metabolites composed of a thioglucose group and an amino acid side-chain. They occur in the Brassicaceae and related families. A wide variety of glucosinolates exists owing to modification of the side-chain structure. Following tissue damage, myrosinase enzymes catalyse the decomposition of glucosinolates to a variety of volatile and nonvolatile products. The genetic control of concentration and side-chain modification of aliphatic glucosinolates, which have side-chains derived from methionine, are simple and well known from work on Arabidopsis and Brassica crops. In controlled conditions in the laboratory or in field trials, many aliphatic glucosinolates, or their degradation products, affect the behaviour of herbivores. For these reasons, we suggest that polymorphism for aliphatic glucosinolates in natural populations offers an attractive system for the study of ecological genetics of plant-herbivore interactions.

Animals↗

Rapid Agrobacterium-mediated transformation and high-efficiency regeneration of finger millet (Eleusine coracana) for crop improvement.

Finger millet (Eleusine coracana) is a nutritionally important and climate-resilient cereal cultivated in rainfed regions of India and Eastern Africa, yet its genetic improvement has been limited by the lack of efficient and reproducible transformation systems. In this study, we developed a rapid and efficient Agrobacterium tumefaciens-mediated transformation and regeneration system using shoot apical meristem (SAM) explants, enabling direct, callus-free shoot organogenesis. Optimal regeneration and shoot elongation were achieved on Murashige and Skoog (MS) medium supplemented with 3.5 mg L⁻1 6-benzylaminopurine (BAP), 1.5 mg L⁻1 kinetin, 0.1 mg L⁻1 2,4-dichlorophenoxyacetic acid (2,4-D), and 0.2 mg L⁻1 gibberellic acid (GA₃). Genotype-dependent responses were observed, with PR-202 requiring 2 mg L⁻1 AgNO3 to reduce phenolic browning, whereas VL-376 regenerated efficiently without AgNO3. Transformation efficiencies of 30-32% were achieved in PR-202 and VL-376, respectively, by optimising infection and co-cultivation conditions, including reduced MS salt strength and pre-incubation of Agrobacterium. Molecular analyses, including PCR and Southern blot hybridisation, confirmed stable T-DNA integration in independent lines, while segregation analysis of T₁ progenies demonstrated Mendelian inheritance of the transgene. In addition, CRISPR/Cas9 constructs targeting EcCKX2 were successfully introduced via Agrobacterium, demonstrating the suitability of this system for genome engineering applications. Overall, this optimised SAM-based protocol provides a rapid (45-50 days), efficient, and reproducible platform for stable genetic transformation in finger millet and establishes a strong foundation for transgenic research and future genome editing studies in this underutilized crop.

Eleusine↗

A new cytoplasmic male sterility system for hybrid seed production in Indian oilseed mustard Brassica juncea.

We report a novel cytoplasmic male sterility (CMS) system in Brassica juncea (oilseed mustard) which could be used for production of hybrid seed in the crop. A male sterile plant identified in a microspore derived doubled haploid population of re-synthesized B. napus line ISN 706 was found to be a CMS as the trait was inherited from the female parent. This CMS, designated '126-1', was subsequently transferred to ten different B. juncea varieties and lines through inter-specific crosses followed by recurrent backcrossing. The F(1)s of inter-specific crosses were invariably partially fertile, but irrespective of the variety/line used, the recipient lines became progressively male sterile over five to seven generations and could be maintained by crossing the male sterile lines with their normal counterparts. The male sterile lines were found to be stable for the trait under both long and short day conditions. CMS lines when crossed with lines other than the respective maintainer line were restored for fertility, implying that any variety could act as a restorer for '126-1' cytoplasm in B. juncea. These unique features in maintenance and restoration of CMS lines coupled with near normal floral morphology of the CMS lines have allowed the use of '126-1' cytoplasm for hybrid seed production. The uniqueness of '126-1' has been further established by Southern hybridization with mitochondrial DNA probes and by a histological study of the development of male sterile anthers.

Brassica napus↗

Geostatistical analysis of spatial and temporal variations of groundwater level.

Groundwater and water resources management plays a key role in conserving the sustainable conditions in arid and semi-arid regions. Applying management tools which can reveal the critical and hot conditions seems necessary due to some limitations such as labor and funding. In this study, spatial and temporal analysis of monthly groundwater level fluctuations of 39 piezometric wells monitored during 12 years was carried out. Geostatistics which has been introduced as a management and decision tool by many researchers has been applied to reveal the spatial and temporal structure of groundwater level fluctuation. Results showed that a strong spatial and temporal structure existed for groundwater level fluctuations due to very low nugget effects. Spatial analysis showed a strong structure of groundwater level drop across the study area and temporal analysis showed that groundwater level fluctuations have temporal structure. On average, the range of variograms for spatial and temporal analysis was about 9.7 km and 7.2 months, respectively. Ordinary and universal kriging methods with cross-validation were applied to assess the accuracy of the chosen variograms in estimation of the groundwater level drop and groundwater level fluctuations for spatial and temporal scales, respectively. Results of ordinary and universal krigings revealed that groundwater level drop and groundwater level fluctuations were underestimated by 3% and 6% for spatial and temporal analysis, respectively, which are very low and acceptable errors and support the unbiasedness hypothesis of kriging. Although, our results demonstrated that spatial structure was a little bit stronger than temporal structure, however, estimation of groundwater level drop and groundwater level fluctuations could be performed with low uncertainty in both space and time scales. Moreover, the results showed that kriging is a beneficial and capable tool for detecting those critical regions where need more attentions for sustainable use of groundwater. Regions in which were detected as critical areas need to be much more managed for using the current water resources efficiently. Conducting water harvesting systems especially in critical and hot areas in order to recharge the groundwater, and altering the current cropping pattern to another one that need less water requirement and applying modern irrigation techniques are highly recommended; otherwise, it is most likely that in a few years no more crop would be cultivated.

Geography↗

Chaos: a potential problem in the biological control of insect pests.

Erratic variations are normally observed in the populations of insect pests that destroy crop plants. To establish a scientific basis for developing effective control procedures, we have developed a model system for the European Corn Borer (ECB) (Ostrinia nubilalis) for which extensive field data, as well as laboratory results, have been accumulated during the past four decades. The model includes both a natural ECB pathogen and a genetically engineered toxin-producing agent as possible means of biological control. Our aim was to determine the conditions that could cause the population to vary erratically, as observed in the field. The erratic behavior in our simulations was analyzed to determine whether it is chaotic; chaos is a distinct type of erratic behavior which shows extreme sensitivity to initial conditions, i.e., the starting size of the population. Our simulations show that an increase in the death rate of the infected ECB, or a decrease in the birth rate of uninfected ECBs from infected ones, variables that are known to be affected by weather conditions, can induce a chaotic regime in which ECB population peaks reach values far higher than before chaos set in. Population peaks are even greater in the presence of both biological control agents. The results show that a biological control regime cannot be effective under conditions that induce chaotic population dynamics. Microcosm studies could be used to determine whether this situation would occur in the field.

Animals↗

[Husbandry appropriate to the species for African naked mole rats (Heterocephalus glaber)].

It is reported about the keeping of a group of Naked Mole Rats (Heterocephalus glaber; nine males and 13 females), which had been imported from Kenya in 1996. The animals are kept in a small experimental room without windows at permanent darkness, 30 degrees C environmental temperature and relative humidity above 70%. They live in a glass container, to which a collapsible system of plexiglass tubes is connected. The moles are daily fed ad libitum with different fresh root crops. Until today three adult animals of the colony have died (tooth problems; bite injuries; parturition complication). The first queen of the colony had three litters with altogether 10 puppies, of which four are still alive. It died during its last litter caused by a complicated stillbirth. The female established after that as new queen in the colony had up to now only one litter with two puppies, which did not survive. The evaluation of the motor activity of the naked mole rats - continously recorded by video techniques - showed the period length of their circadian activity rhythm on the average with 24 h 13.5 +/- 14.4 min. It is supposed that the activity of the mole rats is regulated by the alteration of the local earth magnet field running in a 24-h rhythm.

Animal Husbandry↗

Carbon metabolite sensing and signalling.

The regulation of carbon metabolism in plant cells responds sensitively to the levels of carbon metabolites that are available. The sensing and signalling systems that are involved in this process form a complex web that comprises metabolites, transporters, enzymes, transcription factors and hormones. Exactly which metabolites are sensed is not yet known, but candidates include sucrose, glucose and other hexoses, glucose-6-phosphate, trehalose-6-phosphate, trehalose and adenosine monophosphate. Important components of the signalling pathways include sucrose non-fermenting-1-related protein kinase-1 (SnRK1) and hexokinase; sugar transporters are also implicated. A battery of genes and enzymes involved in carbohydrate metabolism, secondary metabolism, nitrogen assimilation and photosynthesis are under the control of these pathways and fundamental developmental processes such as germination, sprouting, pollen development and senescence are affected by them. Here we review the current knowledge of carbon metabolite sensing and signalling in plants, drawing comparisons with homologous and analogous systems in animals and fungi. We also review the evidence for cross-talk between carbon metabolite and other major signalling systems in plant cells and the prospects for manipulating this fundamentally important aspect of metabolic regulation for crop improvement.

Journal Article↗

Understanding the potential impact of transgenic crops in traditional agriculture: maize farmers' perspectives in Cuba, Guatemala and Mexico.

Genetically engineered transgenic crop varieties (TGVs) have spread rapidly in the last 10 years, increasingly to traditionally-based agricultural systems (TBAS) of the Third World both as seed and food. Proponents claim they are key to reducing hunger and negative environmental impacts of agriculture. Opponents claim they will have the opposite effect. The risk management process (RMP) is the primary way in which TGVs are regulated in the US (and many other industrial countries), and proponents claim that the findings of that process in the US and its regulatory consequences should be extended to TBAS. However, TBAS differ in important ways from industrial agriculture, so TGVs could have different effects in TBAS, and farmers there may evaluate risks and benefits differently. To evaluate some potential impacts of TGVs in TBAS we used the RMP as a framework for the case of Bt maize in Mesoamerica and Cuba. We interviewed 334 farmers in Cuba, Guatemala and Mexico about farming practices, evaluations of potential harm via hypothetical scenarios, and ranking of maize types. Results suggest high potential for transgene flow via seed, grain and pollen; differences in effects of this exposure in TBAS compared with industrial agriculture; farmers see some potential consequences as harmful. Perceptions of harm differ among farmers in ways determined by their farming systems, and are different from those commonly assumed in industrial systems. An RMP including participation of farmers and characteristics of TBAS critical for their functioning is necessary to ensure that investments in agricultural technologies will improve, not compromise these agricultural systems.

Adult↗

Transgenic elite indica rice plants expressing CryIAc delta-endotoxin of Bacillus thuringiensis are resistant against yellow stem borer (Scirpophaga incertulas).

Generation of insect-resistant, transgenic crop plants by expression of the insecticidal crystal protein (ICP) gene of Bacillus thuringiensis (Bt) is a standard crop improvement approach. In such cases, adequate expression of the most appropriate ICP against the target insect pest of the crop species is desirable. It is also considered advantageous to generate Bt-transgenics with multiple toxin systems to control rapid development of pest resistance to the ICP. Larvae of yellow stem borer (YSB), Scirpophaga incertulas, a major lepidopteran insect pest of rice, cause massive losses of rice yield. Studies on insect feeding and on the binding properties of ICP to brush border membrane receptors in the midgut of YSB larvae revealed that cryIAb and cryIAc are two individually suitable candidate genes for developing YSB-resistant rice. Programs were undertaken to develop Bt-transgenic rice with these ICP genes independently in a single cultivar. A cryIAc gene was reconstructed and placed under control of the maize ubiquitin 1 promoter, along with the first intron of the maize ubiquitin 1 gene, and the nos terminator. The gene construct was delivered to embryogenic calli of IR64, an elite indica rice cultivar, using the particle bombardment method. Six highly expressive independent transgenic ICP lines were identified. Molecular analyses and insect-feeding assays of two such lines revealed that the transferred synthetic cryIAc gene was expressed stably in the T2 generation of these lines and that the transgenic rice plants were highly toxic to YSB larvae and lessened the damage caused by their feeding.

Animals↗

Acute renal failure following ingestion of manganese-containing fertilizer.

Fertilizers are used to promote the survival and growth of plants and crops and have a good safety record when used properly. The basic elements in fertilizer include phosphorus, nitrite, and potassium. In addition, there are additive agents that vary for different crops and which may include some metals. Acute intoxication by ingesting fertilizer includes damage to various organ systems as well as severe cardiovascular or respiratory distress. We report the case of a 64-year-old man who ingested about 700 mL of fertilizer and suffered acute renal failure, hyperkalemia, and mild methemoglobinemia. After supportive care and emergent hemodialysis for hemodynamic instability due to hyperkalemia, the renal function of the patient recovered in four days.

Acidosis↗