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Canine leukocyte adhesion deficiency: presence of the Cys36Ser beta-2 integrin mutation in an affected US Irish Setter cross-breed dog and in US Irish Red and White Setters.

Canine leukocyte adhesion deficiency (CLAD) is a primary immunodeficiency disease characterized by recurrent bacterial infections in the presence of marked leukocytosis. The disease was 1st described in the mid-1980s in a cross-breed Irish Setter Dog in the United States. It results from a defective beta-2 subunit of heterodimeric leukocyte adhesion proteins. The causative mutation for CLAD in Irish Setter Dogs from Europe has been identified as a missense mutation at base pair position 107 in the beta-2 integrin subunit gene (ITGB2) that results in an amino acid change from cysteine to serine at amino acid 36 (Cys36Ser) in the beta-2 integrin subunit protein. In the current work, the originally described dog with CLAD has been genetically tested and shown to have the same mutation as the European Irish Setters. This suggests that the mutation has been in the Irish Setter population for many generations spanning more than 2 decades. A related breed, the Irish Red and White Setter, has a history of interbreeding with Irish Setters and shares a common ancestry with the Irish Setter breed. DNA from Irish Red and White Setters residing in the United States was screened either by sequencing or by the newly developed restriction enzyme test for the Irish Setter Cys36Ser CLAD mutation. Seven of 54 dogs tested (13%) were found to be carriers of the Irish Setter CLAD mutation. Five of these were directly related to a sire from the UK, demonstrating the importation of an allele from another continent and establishing the need for genetic testing in this breed in the United States.

Animals↗

Case-control study of blood type, breed, sex, and bacteremia in dogs with immune-mediated hemolytic anemia.

OBJECTIVE: To determine whether blood type, breed, or sex were risk factors for immune-mediated hemolytic anemia (IMHA) in dogs and whether bacteremia was common in dogs with IMHA. DESIGN: Case-control study. ANIMALS: 33 dogs with IMHA, 1,014 dogs without IMHA for which blood type (dog erythrocyte antigens 1.1, 1.2, 3, 4, 5, and 7) was known, 15,668 dogs without IMHA for which breed was known, and 15,589 dogs without IMHA for which sex was known. PROCEDURE: Blood type, breed, and sex distribution of dogs with IMHA were compared with data for control dogs with Fisher exact tests and by calculating odds ratios (ORs). Results of bacterial culture of blood samples were documented for dogs with IMHA, when available. RESULTS: Dog erythrocyte antigen 7 was associated with a significant protective effect (OR, 0.1) in Cocker Spaniels with IMHA (n = 10), compared with control dogs. Cocker Spaniels, Bichon Frise, Miniature Pinschers, Rough-coated Collies, and Finnish Spitz had a significantly increased risk of IMHA, as did female dogs (OR, 2.1). Blood samples from 12 dogs with IMHA were submitted for bacterial culture, and none had bacteremia. CONCLUSIONS AND CLINICAL RELEVANCE: Results suggest that blood type, breed, and sex may play a role in IMHA in dogs.

Anemia, Hemolytic, Autoimmune↗

Performance of Hereford and two-breed rotational crosses of Hereford with Angus and Simmental cattle: II. Carcass traits of steers.

Calf carcass traits were evaluated for Simmental (S) x Hereford (H) and Angus (A) x H crosses in two-breed rotations and for straightbred H. Data were grouped into seven dam breed categories: straightbred Hereford (H), F1 S x H cows (SH), S x H cows of low percentage H (SHS), S x H cows of high percentage H (HSH), F1 A x H cows (AH), A x H cows of low percentage H (AHA) and A x H cows of high percentage H (HAH). Straightbred H and crossbred SH, AH, SHS and AHA cows were mated to H bulls, HSH cows were mated to S bulls and HAH cows were mated to A bulls. Calves from the S x H rotation produced heavier carcasses with less fat, lower quality grade, larger longissimus area and increased estimated cutability compared to A x H calves. Some significant intergenerational differences were observed within rotations, particularly within S x H. Calves from HSH cows mated to S bulls produced carcasses with less fat cover, lower quality grade, larger longissimus muscle area and higher estimated cutability compared to calves from SHS dams mated to H bulls. Within both rotations, evaluation of carcass weight per day of age indicated that postweaning ADG was lower for generations for which H was the sire breed. Carcass traits of calves from SHS, HSH, AHA and HAH dam breed groups from the last 3 yr of the study when calves were fed under two different postweaning management systems were evaluated in a separate analysis.(ABSTRACT TRUNCATED AT 250 WORDS)

Animals↗

Covariances among sire by breed group of dam interaction effects in multibreed sire evaluation procedures.

In multibreed populations, bulls need to be evaluated for additive and nonadditive genetic effects. When the nonadditive genetic effects associated with a bull are defined as sire x breed-group-of-dam interactions, they can be expressed as linear combinations of interactions between alleles of one or more breeds at one or more loci. If these specific allelic interactions are assumed to be independent, then variances and covariances between sire x breed-group-of-dam interaction subclasses can be shown to be linear combinations of variances and covariances of specific intra- and interlocus intra- and interbreed allelic interactions. Furthermore, covariances between sire x breed-group-of-dam interactions due to specific interactions at one, two, or more loci are zero. If dams are assumed to be unrelated to bulls and among themselves, except through their sires and maternal grandsires, efficient procedures to compute the inverse of the covariance matrices of nonadditive genetic effects can be devised, both in subclass and in regression models. Recursive procedures developed make possible the evaluation of large numbers of bulls for nonadditive genetic effects using mixed-model methodology. For completeness, recursive procedures to compute nonadditive covariance matrices in subclass and in regression models also were developed. The prediction of nonadditive genetic values for bulls, in addition to their additive genetic values, will help plan matings, make selection decisions more accurate and, possibly, make economic projections better.

Alleles↗

Effects of percentage Brahman and Angus breeding, age-season of feeding and slaughter end point on feedlot performance and carcass characteristics.

Steers (n = 165) of known percentage Brahman (B) and Angus (A) breeding were used to study effects of breed group (A, 3/4A:1/4B, 1/2A:1/2B, 1/4A:3/4B), age-season of feeding (calves fed during the cool season vs yearlings fed during the warm season) and slaughter end point (less than .90, 1.0 to 1.15, 1.27 to 1.40, greater than or equal to 1.5 cm of adjusted fat over the ribeye) on feedlot performance and carcass characteristics. The 1/2B and 3/4B steers had heavier (P less than .05) initial and final feedlot weights than the A and 1/4B steers and higher (P less than .05) unshrunk ADG than the A steers did. Breed types did not differ for feed efficiency. Yearling steers fed in the warm season had higher (P less than .05) unshrunk ADG than calves fed in the cool season, but ADG calculated on an empty-rumen basis did not differ between the two age-seasons of feeding. Calves fed in the cool season were more efficient (P less than .05) than yearlings fed in the warm season when efficiency was expressed on an empty-rumen basis; however, on a live weight basis there was no difference in feed efficiency. No breed group by age-season of feeding interactions on performance were detected. Slaughter end point did not significantly affect feed efficiency on an empty-rumen basis. The 1/2B and 3/4B steers had smaller ribeye areas (REA) per 100 kg hot carcass and lower marbling scores than the 1/4B and A steers. Yearlings fed in the warm season produced heavier carcasses (P less than .05) than calves fed in the cool season. As s.c. fat thickness at slaughter increased, hot carcass weight and numerical yield grade increased, whereas REA per 100 kg of hot carcass decreased. Marbling also increased as fatness increased up to about 1.5 cm subcutaneous fat.

Adipose Tissue↗

Differences in cathepsin B + L and calcium-dependent protease activities among breed type and their relationship to beef tenderness.

Activities of acidic proteases (cathepsin B + L) and neutral, calcium-dependent proteases (CDP) were quantified to determine whether differences in proteolytic activity could explain differences in meat tenderness among breed types. Steers (n = 32) of known percentage Angus (A) and Brahman (B) breeding were used to establish differences in meat tenderness (A; 3/4A-1/4B; 1/2A-1/2B; 1/4A-3/4B). Samples were removed from the longissimus muscle within 1 h postmortem and within 2 h were frozen for subsequent determination of cathepsin B + L, CDP-I, CDP-II and CDP-inhibitor activities. Warner-Bratzler shear (WBS) was assessed after 1, 5 and 10 d of postmortem aging. Taste panel evaluations, conducted on steaks that were subjected to 5 d of aging, detected no differences. At d 1, WBS did not differ among breed types; however, by d 10 of aging, steaks from Angus steers were more tender (P less than .05) than steaks from 1/2B and 3/4B steers. The Angus and 1/4B steaks had significantly more (P less than .05) cathepsin B + L activity than the 3/4B. The CDP had no relationship with WBS; however, CDP-inhibitor was positively related to d-1 WBS (r = .41, P less than .05). Cathepsin B + L activity was negatively related to WBS at d 10 (r = -.44, P less than .05). These data suggest that differences in meat tenderness among breed types may be explained partially by differences in proteolytic enzyme activity.

Animals↗

Maternal breed of sire effects on postweaning performance of first-cross heifers and production characteristics of 2-year-old heifers.

Postweaning growth rates from weaning to 18 mo, fall condition score, pregnancy rates, and production to 2 yr of age were evaluated in a study of Angus (A)-, Pinzgauer (P)-, Red Poll (R)-, Simmental (S)-, and Tarentaise (T)-sired females from Hereford dams. First-cross heifers from the different sire breeds did not differ (P greater than .10) in initial weight. During a 140-d feed test, S gained 98.6 kg, exceeding (P less than .05) gains of P, 92.3; A, 91.4; and R, 87.3 kg but not T, 94.1 kg. Red Poll-sired heifers weighed less at the end of the 140-d test (P less than .05) than the other crosses, which did not significantly differ from each other. No breed of sire differences were found in gain from 140 d to fall weight. Simmental-sired heifers weighed more (P less than .05) than A- and R-sired heifers at 18 mo. Breed of sire and year interacted to affect pregnancy rate of the yearling heifers when mated to Shorthorn sires for 45 d. Percentage of dystocia varied from a low of 26.3 and 28.9% for T- and A-sired heifers, respectively, to 54.4 and 60.8% for P- and S-sired heifers, respectively (P less than .05). Age of dam of heifers affected (P less than .05) weight at the different period end points but not gains after weaning. Age of dam also affected incidence of dystocia. Two-year-old heifers from young dams had more dystocia than heifers from older dams. Shorthorn-sired calves from 2-yr-old heifers with different sire breeds differed in birth weight (P less than .05) but not survival from birth to weaning, ADG from birth to weaning, weaning age, or weaning condition score. Average 200-d weight of calves from P-, S- and T-sired heifers exceeded those from A- and R-sired heifers by 10.7 kg, or 5.7%.

Animals↗

Simulation of genetic and environmental interaction of three tropical hair sheep breeds.

The Texas A&M Sheep Simulation Model was used to examine genetic-environmental interactions (GEI) among Brazilian Somali, Morada Nova, and Santa Ines breeds and type and level of feed supplement in northeast Brazil. Two sets of simulations were conducted to examine effects of different supplement quality (napier grass vs cunha legume) and quantity (napier grass only). The analyses indicated the benefits from supplementing lambs at weaning during the dry season and from supplementing lactating ewes at the beginning of lambing season when forage is scarce. The cunha legume was an effective supplement, but choosing between cunha legume and napier grass is an economic consideration. Increasing the amount of napier grass supplement per ewe from 200 g/d to 400 g/d resulted in a significant GEI (i.e., different levels of response such as lamb mortality rate, lamb weaning weight, and lambing rate for different breeds). The Brazilian Somali was the least responsive, whereas the Santa Ines was the most responsive to supplementation. It was concluded that the level of supplement should be higher for the Santa Ines and Morada Nova than for the Somali. The amount of supplement should be regulated so that it neither substitutes for nor lowers the utilization of the native caatinga forage. None of the breeds was simulated to be superior in all environments. Thus, considering the wide range of resources of individual farmers, any one of these breeds may be the preferred choice, depending on the individual set of production resources.

Animal Feed↗

Heterosis retention for birth and weaning characters of calves in the third generation of a five-breed diallel.

Data were 876 birth records and 727 weaning records of straightbred and F3 crossbred calves produced in the third generation of a five-breed diallel. Among straightbreds at birth, Holstein calves were heaviest and widest at the shoulders and hips. Jersey calves were lightest and narrowest at the hips, and Brahman calves were narrowest at the shoulders. Holstein crosses tended to be larger at birth than crosses among other breeds. Among straightbreds at weaning, Holstein calves were heaviest and tallest, and Hereford calves were lightest and shortest. Angus calves had the highest survival to weaning rate, and Holstein calves had the lowest survival rate. Among crossbred calves, Holstein crosses tended to be larger at weaning. Estimates of average heterosis retained for birth characters were not significant. Significant breed mean heterosis retention was observed for birth weight, shoulder width, and hip width of Hereford calves and for shoulder width and hip width of Holstein calves. Estimates of average heterosis retained for weaning weight and height were 6.1 kg (P less than .01) and 1.02 cm (P less than .05), respectively. In general, estimates of specific and average heterosis retained for survival to weaning were nonsignificant. Significant breed mean heterosis was observed for weaning weight and height of Brahman, Hereford, and Holstein calves and for survival to weaning of Hereford, Holstein, and Jersey calves.

Animals↗

Influence of breed, number of suckling lambs, and stage of lactation on ewe milk production and lamb growth under range conditions.

Milk production and lamb growth were characterized in 118 multiparous, 3- to 7-yr-old Rambouillet, Columbia, Polypay, and Suffolk ewes under spring sage range and high mountain meadow grazing from 28 to 98 d postpartum. Daily milk yield as measured by the lamb suckling weight differential technique did not differ (P greater than .05) among breeds, although milk production of Suffolk ewes tended to be higher than that of the other three breeds. Within the Rambouillet, Columbia, and Polypay breeds, total estimated yield of ewes with twins was 13 to 17% higher than that of ewes with singles, whereas in the Suffolk breed, suckling twins increased total milk yield 61% over that of ewes with singles. Twin lambs induced a larger differential in dam milk production in late lactation (70 to 98 d) than in earlier lactation (28 to 70 d). Number of lambs did not influence milk protein, Ca, or P content (P greater than .05). Fat levels in colostrum and 4-d milk were elevated 14 and 20%, respectively, in ewes suckling twins compared with ewes suckling singles. Under range conditions, Suffolk ewes suckling single or twin lambs lost more BW (12 and 21% of 4-d postpartum body weight, respectively) than Rambouillet (4 and 7%), Columbia (5 and 8%), or Polypay (8 and 8%) ewes. Correlation coefficients of milk production and lamb growth rate were positive and significant (P less than .05) up to 56 d of age. Growth rate was less closely associated with milk production for twin than for single lambs.

Animal Husbandry↗

Breed effects and heterosis in advanced generations of composite populations on actual weight, adjusted weight, hip height, and condition score of beef cows.

Heterosis effects were evaluated in three composite populations in F1, F2, and F3 generations separately and combined in 1-yr-old and from 2- through greater than or equal to 7-yr-old beef cows. Traits included actual weight, weight adjusted to a common condition score, hip height, and condition score. Breed effects were evaluated in the nine parental breeds (Red Poll [R], Hereford [H], Angus [A], Limousin [L], Braunvieh [B], Pinzgauer [P], Gelbvieh [G], Simmental [S], and Charolais [C]) that contributed to the three composite populations (MARC I = 1/4 B, 1/4 C, 1/4 L, 1/8 H, 1/8 A; MARC II = 1/4 G, 1/4 S, 1/4 H, 1/4 A; and MARC III = 1/4 R, 1/4 P, 1/4 H, 1/4 A). Breed group (parental breed and composite) effects were significant for all traits analyzed. The effects of heterosis were generally important (P less than .05) for all traits in F1, F2, and F3 generations separately and combined in the three composite populations. Generally, the magnitude of heterosis observed at 1 yr of age did not differ from that observed in cows from 2 through greater than or equal to 7 yr old. Adjusting weight to a common condition score resulted in an average reduction of heterosis effects on actual weight by approximately one-fourth. Thus, approximately one-fourth of the effects of heterosis on weight result from heterosis effects on condition score. Generally, retained heterosis in the F3 generation of either 1-yr-old or from 2-through greater than or equal to 7-yr-old cows of the three composite populations did not differ (P greater than .05) from expectation based on retained heterozygosity for the traits analyzed. These results support the hypothesis that heterosis for weight, hip height, and condition score of cows of these age classes is the result of dominance effects of genes.

Analysis of Variance↗

Performance of crosses among Hereford, Angus, and Simmental cattle with different levels of Simmental breeding: VI. Maternal heterosis of 3- to 8-year-old dams and the dominance model.

Data from Hereford, 25% Simmental-75% Hereford, 50% Simmental-50% Hereford, and 75% Simmental-25% Hereford dams were used to estimate maternal heterosis and level of agreement with the dominance model. Cows were located at the Northern Agricultural Research Center near Havre, MT and were managed consistent with practices for western range environments. Sample halves of dam breed groups were bred to Charolais and Tarentaise sires to produce calves at 3 to 8 yr of age. There were 766 exposures to breeding that resulted in 581 calves. Breed group means for most traits supported the dominance model. Maternal heterosis was estimated by regression techniques for 22 cow and calf traits. Maternal heterosis was not significant for day of conception, number of services, gestation length, or calving difficulty. Estimates of maternal heterosis for calf growth traits ranged from .7% for weaning height to 5.2% for weaning weight and 7.5% for weaning condition score. Calf weight per unit of cow weight at weaning showed significant maternal heterosis (7.1%). Higher levels of maternal heterosis were exhibited for milk production (8.2 to 11.1%) and the negative, but nonsignificant, estimate of maternal heterosis for early minus late milk production suggested more persistent lactation for crossbred cows. Maternal heterosis was 11.5% for proportion of dams that calved and 10.4% for proportion of dams that weaned calves. Calf weaning weight per cow exposed to breeding, a characteristic combining calf growth and dam reproduction, exhibited 17.9% maternal heterosis.

Animals↗

Evaluation of Australian merino and U.S. sheep breeds for growth and carcass traits.

One hundred twenty 4-mo-old wether lambs born to Targhee ewes and sired by six rams each from Merino (Finewool, FM and Strongwool, SM), Rambouillet (Dubois, DR and Texas, TR), and Targhee (T) breeds were randomly assigned to predetermined slaughter weight groups of 43, 48, 52, and 57 kg and evaluated for growth and carcass traits. Overall mean ADG and feed conversion rate (FC, kilograms of feed/kilogram of gain) were .28 and 6.4 kg, respectively; T grew the fastest (.31 kg) and FM grew the slowest (.23 kg). Targhee and SM had the best FC (6.2), whereas FM (6.8) had the poorest FC (P < .05). Overall mean backfat thickness (BT) and carcass fat (CF) were 4.8 mm and 25.6%, respectively. Targhee had the lowest (24%) and FM the highest (27.8%) CF percentage (P < .05). Differences (P < .05) were observed for BT and CF among slaughter weight groups; overall means for both traits gradually increased from the 43- to the 57-kg groups. Separate analysis of the 43- and the 48-kg groups indicated nonsignificant breed differences for feed traits, whereas significant differences still existed for CF. It was concluded that Merino strains grew more slowly, were less efficient in postweaning growth, and had higher carcass fat content than U.S. breeds at a constant slaughter weight; SM were more comparable to U.S. breeds than were FM. Merino-cross lambs should be slaughtered at lighter BW to avoid excessive carcass fat.

Adipose Tissue↗

Effect of breed type and sex on the fatty acid composition of subcutaneous and intramuscular lipids of finishing steers and heifers.

Effects of breed type and sex on the fatty acid composition of subcutaneous neutral lipid and intramuscular neutral and phospholipids of longissimus lumborum muscle were investigated using 145 steers and 82 heifers that consisted of pure Japanese Black and Holstein and crossbreds among Japanese Black, Holstein, Japanese Brown, and Charolais. Steers and heifers were reared on a high plane of nutrition and were fed the same concentrate diet and rice straw. All animals were slaughtered serially and carcass composition was determined by dissection of the left side of the carcass. Breed type and sex differences of fatty acid percentages of carcass lipids were compared by adjusting the percentages to mean carcass fat percentages. Heifers had higher contents of 18:1 and total monounsaturated fatty acids in subcutaneous and intramuscular neutral lipids than steers (P < .05). The fatty acid composition of intramuscular phospholipids differed between sexes for 16:0, 20:1, and 20:5, but the differences were small. Breed differences were significant (P < .05) in steers for 16:0, 16:1, 18:1, and total saturated and monounsaturated fatty acids in both subcutaneous and intramuscular neutral lipids, and iso-16:0, 16:0, and total saturated fatty acids in phospholipids, respectively. However, in heifers, fewer fatty acids differed (P < .05) among breed types in the neutral lipids. It is suggested that the Japanese Black has a genetic predisposition for producing carcass lipids containing higher concentrations of monounsaturated fatty acids than Holstein, Japanese Brown, or Charolais.

Animals↗

Breeding season and aspects of reproduction of female goats.

Reproductive data were collected on 608 female goats and their 1,147 offspring, involving 20 herds, from different geographical locations in Georgia for 3 yr. Results for seven breeds and a dairy crossbred revealed that most goats bred seasonally, commencing approximately in late June and reaching a peak in September to November. However, the Pygmy had an unusual peak of mating activity during summer (July). Gestation period ( +/- SE) was 150.6 +/- 2.64 d. Pygmies had the shortest gestation period, whereas Toggenburgs had the longest. Gestation period decreased as the litter of size of the doe increased (b = -.92 d/kid, P < .001) and increased slightly with increasing parity (b = .22 d/parity). December and January matings had the shortest gestation period. Litter size was 1.85 +/- .67, with twins being the most prevalent litter size. Litter size varied among breeds. The litter size increased with mating weight of the doe for most breeds (litter size increased approximately .02 kids/kg of mating weight). Birth weight was 3.24 +/- .64 kg and varied among breeds; Pygmy kids were lightest (1.7 kg) and Toggenburgs were heaviest (3.9 kg). Males were heavier than female kids. Birth weight decreased with the size of litter (approximately .45 kg/kid, P < .001).

Animals↗

Breed differences in boar taint: relationship between tissue levels boar taint compounds and sensory analysis of taint.

A total of 228 intact male pigs form Duroc, Hampshire, Landrace, and Yorkshire breeds were used in the experiment. Samples of salivary gland and backfat were collected at slaughter for colorimetric assay of salivary and fat 16-androstene levels and fat skatole levels. Fat levels also were tested by a sensory panel using an R-index technique for detecting the presence of boar taint. The proportion of tainted carcasses determined by the sensory panel was 5.0% for androstenone and 11.4% for skatole, with a combined total of 15.0% tainted from either source. Sensory analysis of taint showed a lower proportion (P < .05) of tainted carcasses in Hampshire, with no difference in taint across the other three breeds. Analysis of taint compounds indicated that overall 14.5% of pigs had salivary gland 16-androstene levels and 20.9% had fat 16-androstene levels above acceptable limits. There was a higher (P < .05) proportion of Duroc pigs above the threshold levels for 16-androstenes in both salivary gland and fat. Landrace pigs had the lowest (P < .05) average tissue concentrations of steroids and skatole. Across breeds, only 1.8% of pigs had fat skatole concentrations above .25 ppm, which has been suggested as threshold levels of skatole for taint. The canonical correlation coefficient between fat compound levels and the R-indices of fat 16-androstenes and skatole was .40 (P < .001). Our results indicate breed differences in tissue levels of taint compounds and in taint assessed by a sensory panel. Levels of 16-androstene steroids were highly associated with taint, but more pigs had measured levels above the threshold than those identified as tainted by sensory analysis. Levels of fat skatole were low overall and did not account for all the pigs judged as tainted from skatole by sensory analysis.

Androstenes↗

Postweaning performance and carcass merit of F1 steers sired by Brahman and alternative subtropically adapted breeds.

Comparisons were made among F1 steers sired by Brahman and alternative subtropically adapted breeds of bulls for feedlot and carcass traits when steers were produced from Angus- and Hereford-type dams. Brahman-derivative breeds included Brangus, Beefmaster, and Santa Gertrudis. Brangus- and Beefmaster-sired steers weighed less at slaughter, whereas carcasses of Brangus- and Santa Gertrudis-sired steers had more marbling than those of Brahman-sired steers. Brahman-sired steer carcasses had greater longissimus muscle area than carcasses of Santa Gertrudis-sired steers. Other Zebu breeds compared to Brahman were Boran, Gir, Indu-Brazil, Nellore, Red Brahman, and Sahiwal. Steers by Brahman sires had higher slaughter weights than steers by Boran, Gir, Nellore, or Sahiwal sires. Hot carcass weights of Brahman-sired steers were also higher than those of Boran- and Sahiwal-sired steers. Steer carcasses by Brahman sires had greater longissimus muscle area than those of steers by Sahiwal sires. Non-Zebu breeds included Tuli and Senepol. Steers by Tuli sires grew slower, had lower slaughter weights, and their carcasses weighed less than those of Brahman-sired steers. Brahman-sired steer carcasses had greater longissimus muscle area but less marbling than carcasses of Tuli-sired steers. These data suggest that steers by Brahman sires have an advantage for slaughter weight over steers by Brangus, Beefmaster, Boran, Gir, Nellore, Sahiwal, and Tuli sires, but their carcasses are at a disadvantage for marbling score compared with those by Brangus, Boran, Nellore, and Tuli sires.

Adaptation, Physiological↗

Comparison of restricted maximum likelihood and method R for estimating heritability and predicting breeding value under selection.

Method R and Restricted Maximum Likelihood (REML) were compared for estimating heritability (h2) and subsequent prediction of breeding values (a) with data subject to selection. A single-trait animal model was used to generate the data and to predict breeding values. The data originated from 10 sires and 100 dams and simulation progressed for 10 overlapping generations. In simulating the data, genetic evaluation used the underlying parameter values and sires and dams were chosen by truncation selection for greatest predicted breeding values. Four alternative pedigree structures were evaluated: complete pedigree information, 50% of phenotypes with sire identities missing, 50% of phenotypes with dam identities missing, and 50% of phenotypes with sire and dams identities missing. Under selection and with complete pedigree data, Method R was a slightly less consistent estimator of h2 than REML. Estimates of h2 by both methods were biased downward when there was selection and loss of pedigree information and were unbiased when no selection was practiced. The empirical mean square error (EMSE) of Method R was several times larger than the EMSE of REML. In a subsequent analysis, different combinations of generations selected and generations sampled were simulated in an effort to disentangle the effects of both factors on Method R estimates of h2. It was observed that Method R overestimated h2 when both the sampling that is intrinsic in the method and the selection occurred in generations 6 to 10. In a final experiment, BLUP(a) were predicted with h2 estimated by either Method R or REML. Subsequently, five more generations of selection were practiced, and the mean square error of prediction (MSEP) of BLUP(a) was calculated with estimated h2 by either method, or the true value of the parameter. The MSEP of empirical BLUP(a) using Method R was greater than the MSEP of empirical BLUP(a) using REML. The latter statistic was closer to prediction error variance of BLUP(a) than the MSEP of empirical BLUP(a) using Method R, indicating that empirical BLUP(a) calculated using REML produced accurate predictions of breeding values under selection. In conclusion, the variability of h2 estimates calculated with Method R was greater than the variability of h2 estimates calculated with REML, with or without selection. Also, the MSEP of EBLUP(a) calculated using estimates of h2 by Method R was larger than MSEP of EBLUP(a) calculated with REML estimates of h2.

Animal Husbandry↗