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At least 1,027 records · Page 57Linked to original sources
PubMed1990

Are putative dopamine-accumulating cell bodies in the hypothalamic periventricular organ a primitive brain character of non-mammalian vertebrates?

The brains of the chicken, Gallus domesticus, and two amphibians, the anuran Rana ridibunda and the urodele Pleurodeles waltlii, were investigated by means of immunohistochemical techniques with antibodies against dopamine (DA) and tyrosine hydroxylase (TH). As could be expected on the basis of the catecholamine biosynthetic pathway, cell bodies that are immunopositive for the DA antiserum also stain with the TH antibodies. However, a remarkable discrepancy is observed in the hypothalamic periventricular organ where liquor contacting cells exhibit DA- but no TH-immunoreactivity. Since similar results have been obtained in reptiles but not in mammals, it may be concluded that these putative DA-accumulating cells are a primitive brain character of non-mammalian vertebrates.

Animals↗
PubMed1989

Curing of the killer character of Saccharomyces cerevisiae with acridine orange.

Acridine orange, an intercalating dye usually employed in the curing of bacterial plasmids, was tested for its ability to cure K1 and K2 killer strains (laboratory and wine strains). The results showed a high curing percentage of the killer character. This was demonstrated by the loss of M1 or M2 dsRNAs (responsible for toxin production and resistance to it) and because the meiotic products exhibited non-Mendelian segregation. The curing percentages varied, depending on the strain but not on the killer type, and showed similar efficiency as compared with other known curing agents.

Acridine Orange↗
PubMed1991

Agonist-like character of the (R)-enantiomer of 1-hydroxy-3-amino-pyrrolid-2-one (HA-966).

HA-966 (1-hydroxy-3-amino-pyrrolid-2-one), an antagonist at the strychnine-insensitive glycine site on the N-methyl-D-aspartate (NMDA) receptor complex, only partially inhibits the binding of noncompetitive antagonists to the NMDA receptor but enhances the binding of the NMDA competitive antagonist CPP (3-(2-carboxypiperazin-4-yl)propyl-1-phosphonic acid). Here we report that the IC50 of the active (R)-enantiomer of HA-966 for displacement of [3H]glycine binding is decreased in the presence of spermine, suggesting that spermine increases the affinity of (R)-HA-966 at the [3H]glycine binding site. The IC50 values of the agonist glycine and the partial agonist 1-aminocyclopropane-1-carboxylate are also decreased. The IC50 values of glycine antagonists 6,7-dinitroquinoxalin-2,3-dione and 7-chlorokynurenic acid are not significantly altered. The spermine shift represents the first demonstration of the agonist-like character of the (R)-enantiomer of HA-966 at the glycine site.

Amino Acids↗
PubMed2006

Incidence, origin, and character of cerebral injury in twin-to-twin transfusion syndrome treated with fetoscopic laser surgery.

OBJECTIVE: The objective of the study was to determine the incidence, origin, and character of cerebral lesions in monochorionic twins with twin-to-twin transfusion syndrome treated with fetoscopic laser surgery. STUDY DESIGN: This was a prospective study of monochorionic twins with twin-to-twin transfusion syndrome treated with fetoscopic laser surgery and monochorionic twins without twin-to-twin transfusion syndrome delivered at our center between June 2002 and September 2005, using cranial ultrasonography. RESULTS: Incidence of antenatally acquired severe cerebral lesions in the twin-to-twin transfusion syndrome group was 10% (8/84) and 2% (2/108) in the non-twin-to-twin transfusion syndrome group (P = .02). Incidence of severe cerebral lesions at discharge was 14% (12/84) in the twin-to-twin transfusion syndrome group and 6% (6/108) in the non-twin-to-twin transfusion syndrome group (P = .04). Antenatal injury was responsible for severe cerebral lesions in 67% (8/12) of the twin-to-twin transfusion syndrome group. CONCLUSION: Incidence of severe cerebral lesions in twin-to-twin transfusion syndrome treated with fetoscopic laser surgery is high and results mainly from antenatal injury.

Brain Injuries↗
PubMed2004

Kinetic characters and resistance to inhibition of crude and purified brain acetylcholinesterase of three freshwater fishes by organophosphates.

Acetylcholinesterase (AChE) was purified from the brain of three fresh-water fishes, topmouth gudgeon (Pseudorasbora parva), goldfish (Carassius auratus auratus) and rainbow trout (Oncorrhychus mykiss, formerly named Salmo gairdneri) by PEG2000/phosphate-salt two phases extraction, DEAE-Sephadex A-50 and Sephadex G-200 chromatography. Kinetic characters and resistance to inhibition of crude and purified enzymes by organophosphates were then studied. Although the crude enzyme from the trout displayed a different specific activity, kinetic curve, Vmax, and sensitivity to inhibition by oxidized malathion and triazopos compared with the two cyprinoids (i.e. topmouth gudgeon and goldfish), the purified enzymes of all the three species showed no significant difference in all aspects. The result suggested a negligible intrinsic difference of brain AChEs among the tested species.

Acetylcholinesterase↗
PubMed2006

Gcn5p contributes to the bidirectional character of the UGA3-GLT1 yeast promoter.

Analysis of the UGA3-GLT1 bidirectional promoter has indicated that its transcriptional activation is determined by the combined action of Gcn4p and Gln3p, and that its bidirectional character is influenced by chromatin organization, through the action of an Abf1p binding site and a polydAdTtract. Results presented in this paper show that lack of Gcn5p impairs histone acetylation and nucleosomal organization of the UGA3-GLT1 promoter, resulting in an asymmetrical transcriptional activation response of UGA3 and GLT1. The phenotype displayed by a double mutant impaired in GCN5 and in the Abf1p binding site indicates that the combined action of these two elements determines the bidirectional capacity of the UGA3-GLT1 intergenic region.

Acetylation↗
PubMed2005

Correlation character of ionic current fluctuations: analysis of ion current through a voltage-dependent potassium single channel.

The gating of ion channels has widely been modeled by assuming the transition between open and closed states is a memoryless process. Nevertheless, the statistical analysis of an ionic current signal recorded from voltage dependence K(+) single channel is presented. Calculating the sample auto-correlation function of the ionic current based on the digitized signals, rather than the sequence of open and closed states duration time. The results provide evidence for the existence of memory. For different voltages, the ion channel current fluctuation has different correlation attributions. The correlations in data generated by simulation of two Markov models, on one hand, auto-correlation function of the ionic current shows a weaker memory, after a delayed period of time, the attribute of memory does not exist; on the other hand, the correlation depends on the number of states in the Markov model. For V(p)=-60 mV pipette potential, spectral analysis of ion channel current was conducted, the result indicates that the spectrum is not a flat spectrum, the data set from ionic current fluctuations shows considerable variability with a broad 1/f -like spectrum, alpha=1.261+/-0.24. Thus the ion current fluctuations give information about the kinetics of the channel protein, the results suggest the correlation character of ion channel protein nonlinear kinetics regardless of whether the channel is in open or closed state.

Animals↗
PubMed2006

Determination of Brett character responsible compounds in wines by using multiple headspace solid-phase microextraction.

This study presents a method based on the use of multiple headspace solid-phase microextraction (MHS-SPME) for the quantitative analysis of 4-ethylphenol, 4-ethylguaiacol, 4-vinylphenol and 4-vinylguaiacol. MHS-SPME is a modification of SPME that implies several consecutive extractions from the same sample and avoids possible matrix effects. This study demonstrates the existence of a matrix effect in the analysis of compounds responsible for Brett character in wine when an HS-SPME based method is used with a carbowax/divinylbenzene (CW/DVB) fibre. For this reason, MHS-SPME is proposed as an alternative technique with respect to HS-SPME. The method proposed was validated and the detection limits obtained were 0.06 microg/l for 4-ethylguaiacol and 4-ethylphenol and, 0.20 microg/l for 4-vinylguaiacol and 0.12 microg/l for 4-vinylphenol. These detection limits are below the odour detection thresholds of the compounds in wine matrices. The repeatability obtained, in terms of relative standard deviation (RSD), was considered acceptable, ranging from 1 to 12%. To evaluate the applicability of the proposed MHS-SPME method, concentration results were compared with those obtained with the standard addition method, and the results were similar with both methods. Furthermore, the new method was satisfactorily applied to a number of commercial red, white and rosé wines. Therefore, MHS-SPME can be considered as an alternative to avoid the matrix effect in wine samples.

Calibration↗
PubMed2005

Basal ganglia local field potential activity: character and functional significance in the human.

Functional neurosurgery in patients with movement disorders has provided a unique opportunity to record directly form the human basal ganglia (BG) and to thereby further our understanding of these 'dark basements of the mind.' Two possibilities exist: either single unit and local field potential (LFP) recordings can be made intra-operatively through microelectrodes, or LFPs may be recorded directly from the deep brain stimulation electrode in the peri-operative period. The LFPs so recorded in the BG of patients are pleomorphic, oscillatory, focal and the product of synchronised current changes in local neuronal elements. They are presently most simply classified by frequency into activities at <8, 8-30 and >60 Hz, although such a schema is unlikely to capture the full complexity of rhythmic synchronisation with respect to behavioural and disease dependency. The best characterised group of LFP oscillations is that at 8-30 Hz. This activity is prominent in the subthalamic nucleus and globus pallidus of Parkinsonian patients withdrawn from their dopaminergic medication. Dopaminergic treatments, behaviourally relevant stimuli and voluntary movement suppress it. The available evidence points to the 8-30 Hz activity being essentially antikinetic in character and inversely related to motor processing. Its exaggeration may therefore contribute to the bradykinesia of Parkinson's disease.

Action Potentials↗
PubMed2005

Multi-criterial coding sequence prediction. Combination of GeneMark with two novel, coding-character specific quantities.

This work applies two recently formulated quantities, strongly correlated with the coding character of a sequence, as an additional "module" on GeneMark, in a three-criterial method. The difference in the statistical approaches implicated by the methods combined here, is expected to contribute to an efficient assignment of functionality to unannotated genomic sequences. The developed combined algorithm is used to fractionalize a collection of GeneMark-predicted exons into sub-collections of different expectation to be coding. A further modification of the algorithm allows for the assignment of an improved estimation of the probability to be coding, to GeneMark-predicted exons. This is on the basis of a suitable training set of GeneMark-predicted exons of known functionality.

Algorithms↗
PubMed2006

Histamine release, an undesired effect of thrombin inhibitors with basic character, is mediated through direct activation of G(i) proteins.

The common structural feature of LK direct thrombin inhibitors is a strong basic group attached to the azaphenylalanine scaffold, which is important for the appropriate interaction at the thrombin active site. Our previous results have shown that this basic group could be responsible for a reduction of tracheal air flow and a fall of mean arterial pressure in anaesthetized rats, an undesired effect of direct thrombin inhibitors which correlated with their ability to release histamine from mast cells. In the present study, we investigated the mechanism of LK direct thrombin inhibitors-induced histamine release from rat peritoneal mast cells. We demonstrated that thrombin inhibitors with basic character (LK-732, LK-639 and LK-6063) provoked release of histamine from mast cells, while less basic analogs (LK-658, LK-633 and LK-6062) had no effect. Histamine released by LK-732 and LK-639 was suppressed by removal of sialic acid residues by neuraminidase and by pertussis toxin, an inhibitor of G(i) protein activity. Additional demonstration that G proteins are the targets of LK-732 and LK-639 was provided by the increase of GTPgammaS binding rate to G proteins in rat brain cortical membranes. Our results indicate that basic direct thrombin inhibitors LK-732 and LK-639 provoke release of histamine from mast cells by direct activation of G(i) proteins through the similar biochemical pathway as basic secretagogues.

Analysis of Variance↗
PubMed2006

Quantitative characterization of morphological polymorphism of handwritten characters loops.

A methodology based on Fourier descriptors that was previously validated has been applied to 13 writers in order to quantify the polymorphism degree of the shape of the loops of the handwritten characters a, d, o and q. In a first step, the discriminating power of the parameters extracted from these letters was investigated. The loop of the letter d appeared to be the most discriminant with a correct classification rate of 82.4%, whereas the least discriminant one was the loop of the letter o (69.7%). The second aim of the study was to extract grouping characteristics which make it possible to discriminate between writer sets, whatever the letter. Trends in the writing of loops could effectively be shown: the 13 writers of the study were separated into five main groups according to the shape and surface of their loops. The most discriminating features between the writer groups were the importance of the loops elongation and the surface of the loops. Finally, the differences between writers belonging to distinct groups could be characterized more precisely, and differences between writers belonging to the same group were revealed; the individual writings were distinguished by the variability of the parameters of shape and surface of their loops and the morphological distances between its different letters. The correct classification rates reached in this study suggest that carrying out an expertise of fragmentary samples of handwriting comprising only some loops is completely possible.

Journal Article↗
PubMed2004

Bipolar disorder: I. Temperament and character.

BACKGROUND: The nature of the relationship between personality and bipolar affective disorders is an important but unanswered question. METHODS: We have studied personality in bipolar patients by using the Temperament and Character Inventory (TCI). TCI were administered to 100 euthymic bipolar patients and 100 controls from the normal population. RESULTS: Bipolar patients were significantly higher in harm avoidance (HA) and lower in reward dependence (RD), self-directedness (SD), and cooperativeness (CO) than controls. Bipolar patients are more fatigable, less sentimental, more independent, less purposeful, less resourceful, less empathic, less helpful, less pure-hearted, and have less impulse control than controls. Bipolar II patients are more impulsive, more fatigable, less resourceful, and have less impulse control than bipolar I patients. LIMITATIONS: Our results are limited to euthymic bipolar patients and cannot be generalized to affective disorders. CONCLUSIONS: Even when clinically euthymic on lithium maintenance, bipolar patients continue to have a characteristic cognitive deficit. This is in agreement with cognitive theories about cognitive deficits in depression that are regarded as important vulnerability factors in mood disorders.

Adult↗
PubMed2004

A dual vulnerability hypothesis for seasonal depression is supported by the seasonal pattern assessment questionnaire in relation to the temperament and character inventory of personality in a general population.

BACKGROUND: Personality structure obtained from the psychobiological Temperament and Character Inventory (TCI) was studied in relation to self-reported seasonal variations in mood and behavior measured by the Seasonal Pattern Assessment Questionnaire (SPAQ). METHODS: The subjects comprised 1761 adults (57.6% women) in the age range 35-85 years, enrolled in the Betula prospective random cohort study of Umea, Sweden. RESULTS: Personality profiles of subjects who reported the occurrence of a high degree of seasonal variation as such were associated with a combination of high self-transcendence (ST) and high persistence (PS), irrespective of the level of harm avoidance (HA). Subjects who reported feeling worst in winter were associated with high HA, irrespective of the levels of ST and PS. Also, subjects feeling worst in summer or experiencing overall problems with seasonal variation were associated with high HA in their personality profiles. Using the SPAQ criteria to define seasonal affective disorder (SAD) or subsyndromal SAD (S-SAD), subjects with these disorders often had combinations of high self-transcendence (ST) and high persistence (PS), but with different associations with HA. LIMITATIONS: No evaluations were made for SAD or subsyndromal SAD according to the DSM-IV or ICD 10 criteria. CONCLUSIONS: Our results relating SPAQ with TCI give support for a dual vulnerability hypothesis for seasonal depression proposed in the literature, where it is attributed to a combination of a seasonal factor and a depression factor. Examining the literature regarding the relationships between the different TCI scales and monoamine neurotransmitter functions, those relationships suggest that these two vulnerability factors for seasonal depression may be modulated by different neurotransmitter systems.

Adult↗
PubMed2004

Comparison of character-level and part of speech features for name recognition in biomedical texts.

The immense volume of data which is now available from experiments in molecular biology has led to an explosion in reported results most of which are available only in unstructured text format. For this reason there has been great interest in the task of text mining to aid in fact extraction, document screening, citation analysis, and linkage with large gene and gene-product databases. In particular there has been an intensive investigation into the named entity (NE) task as a core technology in all of these tasks which has been driven by the availability of high volume training sets such as the GENIA v3.02 corpus. Despite such large training sets accuracy for biology NE has proven to be consistently far below the high levels of performance in the news domain where F scores above 90 are commonly reported which can be considered near to human performance. We argue that it is crucial that more rigorous analysis of the factors that contribute to the model's performance be applied to discover where the underlying limitations are and what our future research direction should be. Our investigation in this paper reports on variations of two widely used feature types, part of speech (POS) tags and character-level orthographic features, and makes a comparison of how these variations influence performance. We base our experiments on a proven state-of-the-art model, support vector machines using a high quality subset of 100 annotated MEDLINE abstracts. Experiments reveal that the best performing features are orthographic features with F score of 72.6. Although the Brill tagger trained in-domain on the GENIA v3.02p POS corpus gives the best overall performance of any POS tagger, at an F score of 68.6, this is still significantly below the orthographic features. In combination these two features types appear to interfere with each other and degrade performance slightly to an F score of 72.3.

Abbreviations as Topic↗
PubMed2005

What's in a character?

Systematic analyses are included as integral parts of bioinformatic analysis. The use of phenetic and phylogenetic trees in many of the newer areas of biology create a need for bioinformaticists to understand more completely the nuances of systematic analysis. Any description in comparative biology, universally begins with what information to use in the comparative endeavor. Phylogenetic approaches are no different. The diversity of approaches and phylogenetic questions in systematics have sometimes hindered a precise understanding of what primary data should be collected to perform such analyses. In addition, one should always keep in mind that the objective of systematic organization of entities in nature not only strives to organize those entities in an objective, repeatable and operational way, but also to organize the attributes of the entities in a similar hierarchical context. This paper attempts to describe characters as the basis of all comparative analysis, to describe the diverse kinds of primary data that exist today in biology, genomics, and bioinformatics, and to place these kinds of primary data in the context of the established approaches to tree building.

Animals↗
PubMed2006

Study of the surface character as responsible for controlling interfacial forces at membrane-feed interface.

The role of the interfacial forces was emphasized in interactive processes, involving membrane surface and penetrating molecules. The surface character controlling the dissolution process of some species (CO2, H2O, C3H6O2, C4H8O2, C5H10O2) was evaluated in relation to the supra-molecular chemistry of membranes based on 80PTMO/PA12. Infrared analyses combined with the estimation of the hydrophilic and hydrophobic domains of the membrane surface yielded useful information about the distribution, availability and accessibility of the polar moieties responsible for the penetrant sorption. At the interface, attractive Lewis acid/base interactions such as H-bonding directed the sorption of vapor species into the membranes, whereas quadrupolar CO2 participated in specific Lifshitz-van der Waals interactions with the modified polymers. In both the cases, the presence of additional polar moieties such as carbonyl, sulfonamide, and hydroxyl groups enhanced the affinity of the Pebax-based membranes for the penetrating species considered in this work. As a result, the quantification of the reactivity of a membrane surface for specific molecules may allow predictive models to be constructed and selective membranes to be designed.

1-Butanol↗
PubMed2005

Photoinduced electron transfer between cytochrome c and a novel 1,4,5,8-naphthalenetetracarboxylic diimide with amphiphilic character.

N-dodecyl-N'-(2-phosphonoethyl)-1,4,5,8-naphthalenetetracarboxylic diimide (DNDI) is a novel naphthalenic diimide with amphiphilic character. DNDI was synthesized through the sequential reaction of 1,4,5,8-naphthalenetetracarboxylic dianhydride, first with dodecylamine and then with 2-aminoethylphosphonic acid. Fluorescence measurements showed that DNDI forms excimers in water at sufficiently high concentrations. The fluorescence quantum yield of DNDI in diluted solutions is sensitive to the polarity of the microenvironment, decreasing as going from water to less polar solvents. This property allowed to monitor the incorporation of DNDI into cetyl trimethyl ammonium bromide (CTAB) micelles, with a binding constant of 1.2x10(4) M-1. UV irradiation (365 nm) of solutions containing DNDI and the redox protein cytochrome c (cyt c) resulted in the reduction of the heme iron from the Fe(III) to the Fe(II) state, a reaction that was inhibited by the incorporation of DNDI into CTAB micelles. DNDI formed host-guest complexes with alpha-cyclodextrin (alpha-CD) through the inclusion of the dodecyl group, resulting in an increased aqueous solubility of the compound.

Cytochromes c↗