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Biological and social feasibility of Sesbania fallow practice in small holder agricultural farms in developing countries: a Zambian case study.

Many small holder farmers in developing countries face problems of declining soil fertility and crop yields and insufficient money to buy expensive inorganic fertilizers. The Sesbania fallow system, an agroforestry technology, seems to hold a key to these problems. Based on field studies in eastern Zambia, this paper reports that fallow system has the potential to improve and sustain soil productivity in the small holder farms. However, the paper also reports that the ability for subsistence farmers to adopt the Sesbania fallow system is affected by gender differences in resource allocation to productive resources and institutional, cultural, and social structural settings in which farmers exist and make decisions.

Agriculture↗

Air pollution and its impacts on wheat yield in the Pakistan Punjab.

A study using open-top chambers ventilated with ambient or charcoal-filtered air in the vicinity of Lahore, Pakistan, has demonstrated a reduction of 46.7% and 34.8% in the grain yield for two cultivars of winter wheat (Triticum aestivum L.). The 6-h daily mean O(3) concentrations were 25-45 nl litre(-1) and on the basis of experience in North America and Europe, reductions in yield in the present study are substantially greater than might be predicted. The reasons for this discrepancy are discussed, together with implications for the suitability of a simple, relatively cheap, open-top chamber system for developing-country studies on the effects of air pollution on crops.

Journal Article↗

Deployment of disease resistance genes by plant transformation - a 'mix and match' approach.

Breeding for disease resistance has often resulted in the evolution of a matching virulence within the pathogen population, leading to an apparent 'breakdown' of resistance. In general, plant breeders have responded by introducing new genes for resistance, with similar consequences. This has led to 'boom-bust' cycles, where varieties possessing effective resistance are grown on an expanding acreage (boom) until matching virulence evolves and spreads within the pathogen population (bust). A variety of resistance genes have recently been identified and characterized in model systems. Together with the development of efficient plant transformation systems these genes offer an alternative means to introduce specific resistance into a crop improvement programme. However, unless the resistance genes are deployed with care, the boom-bust cycle is likely to be perpetuated.

Journal Article↗

Light-regulated and organ-specific expression of a wheat Cab gene in transgenic tobacco.

Many of our most important crop plants are monocotyledons, including wheat, corn, rice and barley. No routine transformation system for monocotyledons has been reported, such as the Ti-mediated gene transfer system for dicotyledons facilitated by Agrobacterium tumefaciens. Indirect evidence suggests that Ti-plasmid DNA is transferred into and expressed in A. tumefaciens-infected wound tissues of plants from Liliaceae and Amaryllidaceae, but these observations have not been extended to monocotyledons of greatest agricultural importance. Regeneration of monocotyledons is usually blocked at the callus-stage, further complicating the possibility of exploring the regulated expression of their genes, and thus preventing identification of the regulatory domains of monocotyledonous genes in a homologous nuclear background. To circumvent these difficulties, we investigated whether monocotyledonous genes can be expressed and correctly regulated in dicotyledons. We have introduced a wheat gene (whAB1.6) encoding the major chlorophyll a/b binding protein (Cab) of the light-harvesting complex into the genomes of tobacco (Nicotiana tabacum SR1) and petunia (Petunia hybrida) via a Ti-DNA-mediated gene transfer system which allows the transformed cells to regenerate into whole plants. Here we report for the first time the light-regulated and organ-specific expression of a monocotyledonous gene in transgenic dicotyledonous plants.

Base Sequence↗

Functional analysis of homologous and heterologous promoters in strawberry fruits using transient expression.

The isolation and characterization of fruit-specific promoters are critical for the manipulation of the nutritional value and quality of fruits by genetic engineering. The analysis of regulatory sequences of many ripening-related genes has remained elusive for many species due to their low transformation efficiency and/or lengthy regeneration of a small number of transgenic plants. Strawberry is an important crop and represents one of the most widely studied non-climacteric model systems. However, until recently, its difficult regeneration has limited the functional study of promoters by stable transformation. A protocol based on biolistic transient transformation has been developed in order to study the function of promoters in a fast and efficient manner in strawberry fruits. The protocol has been applied to the study of the GalUR promoter, a gene involved in the biosynthesis of vitamin C in this fruit. The activity of the GalUR promoter is restricted to the fruit, being strictly dependent on light. The analysis of deletion series revealed the presence of a minimum activation region 397 bp upstream of the gene with a putative G-box motif, and a negative regulatory region between -397 and -518 bp, where an I-box was identified. The transient assay has been used to study the activity of the tomato polygalacturonase and the pepper fibrillin promoters in strawberry fruits. Whereas slight activity was observed with the fibrillin promoter, no significant activity was found with the polygalacturonase promoter. The GalUR promoter in transiently transformed ripe tomato fruits showed no activity, indicating the presence of regulatory sequences specific for its function in strawberry fruit.

Alcohol Oxidoreductases↗

Expressed sequence tags from Diabrotica virgifera virgifera midgut identify a coleopteran cadherin and a diversity of cathepsins.

The Western corn rootworm is the major pest of corn in the USA and has recently become the target for insect-resistant transgenic crops. Transgenic crops have switched the focus for identifying insecticide targets from the insect nervous system to the midgut. Here we describe a collection of 691 sequences from the Western corn rootworm midgut, 27% of which predict proteins with no matches in current databases. Of the remaining sequences, most predict proteins with either catalytic (62%) or binding (19%) functions, as expected for proteins expressed in the insect midgut. The utility of this approach for the identification of targets for novel toxins is demonstrated by analysis of the first coleopteran cadherin gene, a putative Bt receptor, and a large class of cysteine-proteases, the cathepsins.

Amino Acid Sequence↗

Expression of a fungal phytase gene in Nicotiana tabacum improves phosphorus nutrition of plants grown in amended soils.

Transgenic Nicotiana tabacum plants expressing a chimeric phytase gene (ex::phyA) from the soil fungus Aspergillus niger were generated. Three independently transformed lines showed increased extracellular phytase activity compared with a vector control and wild-type plants, both of which had no detectable extracellular phytase. Transgenic N. tabacum plants grown in sterile agar supplied with phosphorus (P) as phytate accumulated 3.7-fold more P than vector control plants. Despite this, the expression of ex::phyA in plants did not lead to an improved accumulation of P from two unamended P-deficient soils. However, when soils were amended with either phytate or phosphate and lime, transgenic plants accumulated up to 52% more P than controls. Positive responses by transgenic plants were, in some instances, coincident with a putative increase in soil phytate. We conclude that the development of plants that exude phytase to the soil may not ensure improved plant P nutrition, as the availability of phytate in the soil also appears to be critical. Nevertheless, if plants that express ex::phyA are combined with soil amendments that promote the availability of phytate, there is the potential to enhance the P nutrition of crop plants and to improve the efficiency of P fertilizer use in agricultural systems.

Journal Article↗

Evidence that human growth hormone is a potent lactogen in primates.

To help determine if human GH (hGH) plays a physiological role in normal mammary function or diseases of the human breast, a study was undertaken to examine the lactogenic potency of hGH in a subhuman primate system. hGH was previously considered a relatively weak lactogen when tested in avian crop sac and rodent mammary assays. The effect of hGH on the production of alpha-lactalbumin in organ cultures of primate mammary tissue was compared with the effect of equal concentrations of ovine PRL (oPRL). Mammary tissues from seven adult rhesus monkeys were maintained in culture for 9 days (medium changed every 3 days) without and with oPRL or hGH in doses ranging from 30-1000 ng/ml. hGH was consistently more effective than oPRL in the stimulation of alpha-lactalbumin production in over 90% of the cases. For example, mean (+/- SEM) alpha-lactalbumin production at the 6-day time period in response to 1000 ng/ml hormone was 12.9 +/- 3.3 ng/ml for oPRL and 61.9 +/- 18 ng/ml for hGH. Overall, it was calculated that hGH had 328% the potency of oPRL in adult rhesus monkey mammary tissue. In pigtail macaques, hGH was also a more potent stimulant of alpha-lactalbumin production than oPRL, but the differences wer not as great as in rhesus monkeys. alpha-Lactalbumin in medium was higher in hGH-containing dishes than in those containing oPRL in over 85% of the cases. It was calculated that the lactogenic potency of hGH in macaque tissue was 160.5% that of oPRL. The differences between species were significant. These results indicate that hGH is a more effective lactogen in subhuman primates than oPRL and suggest the possibility of GH may be a lactogen which has physiological importance.

Animals↗

Structural analysis of wheat stems.

Design and development of improved harvesting, preprocessing, and bulk handling systems for biomass requires knowledge of the biomechanical properties and structural characteristics of crop residue. Structural analysis of wheat stem cross-sections was performed using the theory of composites and finite element analysis techniques. Representative geometries of the stem's structural components including the hypoderm, ground tissue, and vascular bundles were established using microscopy techniques. Material property data for the analysis was obtained from measured results. Results from the isotropic structural analysis model were compared with experimental data. Future work includes structural analysis and comparison with experimental results for additional wheat stem models and loading configurations.

Compressive Strength↗

A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium).

We report genetic maps for diploid (D) and tetraploid (AtDt) Gossypium genomes composed of sequence-tagged sites (STS) that foster structural, functional, and evolutionary genomic studies. The maps include, respectively, 2584 loci at 1.72-cM ( approximately 600 kb) intervals based on 2007 probes (AtDt) and 763 loci at 1.96-cM ( approximately 500 kb) intervals detected by 662 probes (D). Both diploid and tetraploid cottons exhibit negative crossover interference; i.e., double recombinants are unexpectedly abundant. We found no major structural changes between Dt and D chromosomes, but confirmed two reciprocal translocations between At chromosomes and several inversions. Concentrations of probes in corresponding regions of the various genomes may represent centromeres, while genome-specific concentrations may represent heterochromatin. Locus duplication patterns reveal all 13 expected homeologous chromosome sets and lend new support to the possibility that a more ancient polyploidization event may have predated the A-D divergence of 6-11 million years ago. Identification of SSRs within 312 RFLP sequences plus direct mapping of 124 SSRs and exploration for CAPS and SNPs illustrate the "portability" of these STS loci across populations and detection systems useful for marker-assisted improvement of the world's leading fiber crop. These data provide new insights into polyploid evolution and represent a foundation for assembly of a finished sequence of the cotton genome.

Chromosome Mapping↗

Different cross-resistance patterns in the diamondback moth (Lepidoptera: Plutellidae) resistant to Bacillus thuringiensis toxin Cry1C.

Two strains of the diamondback moth, Plutella xylostella (L.), were selected using Cry1C protoxin and transgenic broccoli plants expressing a Cry1C toxin of Bacillus thuringiensis (Bt). Both strains were resistant to Cry1C but had different cross-resistance patterns. We used 12 Bt protoxins for cross-resistance tests, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Bb, Cry1C, Cry1D, Cry1E, Cry1F, Cry1J, Cry2Ab, Cry9Aa, and Cry9C. Compared with the unselected sister strain (BCS), the resistance ratio (BR) of one strain (BCS-Cry1C-1) to the Cry1C protoxin was 1,090-fold with high level of cross-resistance to Cry1Aa, Cry1Ab, Cry1Ac, Cry1F, and Cry1J (RR > 390-fold). The cross-resistance to Cry1A, Cry1F, and Cry1J in this strain was probably related to the Cry1A resistance gene(s) that came from the initial field population and was caused by intensive sprayings of Bt products containing Cry1A protoxins. The neonates of this strain can survive on transgenic broccoli plants expressing either Cry1Ac or Cry1C toxins. The other strain (BCS-Cry1C-2) was highly resistant to Cry1C but not cross-resistant to other Bt protoxins. The neonates of this strain can survive on transgenic broccoli expressing Cry1C toxin but not Cry1Ac toxin. The gene(s) conferring resistance to Cry1C segregates independently from Cry1Ac resistance in these strains. The toxicity of Cry1E and Cry2Ab protoxins was low to all of the three strains. The overall progress of all work has resulted in a unique model system to test the stacked genes strategy for resistance management of Bt transgenic crops.

Animals↗

Pond treatment and effluent reuse of sewage from an oil production site in an arid coastal environment.

A pond system consisting of two lines each of an anaerobic followed by facultative and maturation ponds is used to treat site sewage from oil and gas production operations in an arid coastal environment. The performance of the pond system was evaluated together with the suitability of treated effluent for reuse in local irrigation. Effluent from the pond system by-and-large satisfies criteria for irrigation of non-food crop plants with respect to chemical parameters. The primary problem is coliform bacteria levels which are an order of magnitude higher than preferred values. First-order decay rate constants for each pond were calculated from a mass balance model that assumes complete mixing and incorporates the considerable evaporation that occurs in this setting. While the anaerobic ponds of both lines exhibit suitable performance, rate calculations indicate that the facultative and maturation ponds of the East Line are performing better than the West. A tracer study of the facultative and maturation ponds indicates that some short-circuiting is occurring in the West Line. A field experiment of coliform transport in irrigated soil gives indications of short- and long-term risks associated with reuse of the effluent.

Agriculture↗

Modelling the influence of irrigation abstractions on Scotland's water resources.

Legislation to control abstraction of water in Scotland is limited and for purposes such as irrigation there are no restrictions in place over most of the country. This situation is set to change with implementation of the European Water Framework Directive. As a first step towards the development of appropriate policy for irrigation control there is a need to assess the current scale of irrigation practices in Scotland. This paper presents a modelling approach that has been used to quantify spatially the volume of water abstractions across the country for irrigation of potato crops under typical climatic conditions. A water balance model was developed to calculate soil moisture deficits and identify the potential need for irrigation. The results were then combined with spatial data on potato cropping and integrated to the sub-catchment scale to identify the river systems most at risk from over-abstraction. The results highlight that the areas that have greatest need for irrigation of potatoes are all concentrated in the central east-coast area of Scotland. The difference between irrigation demand in wet and dry years is very significant, although spatial patterns of the distribution are similar.

Agriculture↗

Production of new/modified proteins in transgenic plants.

In recent years, plant biotechnology has almost reached maturity. Transgenic plants engineered to be herbicide- or insect-resistant are outcompeting conventional crop plants and pest managing strategies leading to a major rethinking of the chemical industry. Due to worldwide efforts to study genome function, almost any gene of interest is, or will soon be available. Thus, identification of gene function will be the major challenge of the next few years. In combination with established gene-delivery systems and desired promoter and targetting sequences, gene discovery will open a fascinating and new field of crop plant design. Transgenic plants engineered to produce superior polypeptides have already been created and the first examples are entering clinical and industrial trials.

Amino Acids↗

Engineering concepts for food processing in bioregenerative life support systems.

Long-duration manned missions, such as Mars exploration, will require development of new and cost-effective food production and delivery systems. Requirements for both carry-on preserved food and food processed from on-board crops exceed the capabilities of existing food processing and preservation technologies. For the transit phase, new food products, preservation methods, and processing technologies for ground-based food processing are required. The bioregenerative surface phase requires methods for processing of in situ-grown crops, treatment of food wastes, preparation of daily meals, and design of nutritious and appealing plant-based menus, all within severe cost and labor constraints. In design of the food supply for a long-term mission, the designers must select and apply both the packaged food and in situ processing technologies most appropriate for the specific mission requirements. This study aims to evaluate the strengths and weaknesses of different food system strategies in the context of different types of mission, and to point out the most important areas for future technology development.

Diet↗

[Study on the identification of genomic modified foods].

Nucleotide-based amplification method is an important system for the identification of genomic modified foods (GMF). Roundup Ready Soybeans (Monsanto company), Bt 176 GM maize (Novartis/Ciba-Geigy company) and Cecropin D capsicum was used as material to search for the feasibility of investigating the safety of GMF by PCR method. Primers specific for inserted genes and crop endogenous genes in Roundup Ready Soybeans, Bt 176 maize and Cecropin D capsicum were applied. The discrimination system for GM soybeans, GM maize and GM capsicum from the counterpart of non-GM products and the detection system for correlating marker genes and transgenes are established. The method was easy and fast, and the corresponding results fixed the standard or declared data.

Capsicum↗

Pesticide risk reduction on crops in the Province of Ontario.

We analyzed the changes in pesticide use and risk in the Province of Ontario, Canada, from 1973 to 1998 to monitor the success of Food Systems 2002, a program to reduce pesticide use by 50%. Pesticide risk was calculated by multiplying the amount of pesticide used (kilograms of active ingredient) by the Environmental Impact Quotient (EIQ), a score for the potential risk of pesticides to farmworkers, consumers, and the environment. Pesticide use increased by 46% from 1973 to 1983. From 1983, the baseline year for Food Systems 2002, to 1998, pesticide use decreased by 38.5% and risk declined 39.5%. The reductions in pesticide use and risk were primarily on corn (Zea mays L.) and tobacco (Nicotiana tabacum L.), the crops with the highest pesticide use in 1983. Total pesticide use on soybean [Glycine max (L.) Merr.] did not change, but the mean application rate (kg ha(-1)) decreased by 57%. Corn and soybean account for 65% of pesticide use, but have a relatively low pesticide use and risk per hectare and per tonne of production. Total pesticide use on tobacco, fruits, and vegetables was lower than on corn or soybean, but the pesticide use and risk per hectare were much higher. Small reductions in pesticide use on corn and soybean may allow a 50% reduction in pesticide use, but greater reductions in risk can be achieved by reducing the use of "high risk" pesticides on fruit and vegetables.

Agriculture↗

Growing crops for space explorers on the moon, Mars, or in space.

An option in the long-duration exploration of space, whether on the Moon or Mars or in a spacecraft on its way to Mars or the asteroids, is to utilize a bioregenerative life-support system in addition to the physicochemical systems that will always be necessary. Green plants can use the energy of light to remove carbon dioxide from the atmosphere and add oxygen to it while at the same time synthesizing food for the space travelers. The water that crop plants transpire can be condensed in pure form, contributing to the water purification system. An added bonus is that green plants provide a familiar environment for humans far from their home planet. The down side is that such a bioregenerative life-support system--called a controlled environment life-support system (CELSS) in this paper--must be highly complex and relatively massive to maintain a proper composition of the atmosphere while also providing food. Thus, launch costs will be high. Except for resupply and removal of nonrecycleable substances, such a system is nearly closed with respect to matter but open with respect to energy. Although a CELSS facility is small compared to the Earth's biosphere, it must be large enough to feed humans and provide a suitable atmosphere for them. A functioning CELSS can only be created with the help of today's advanced technology, especially computerized controls. Needed are energy for light, possibly from a nuclear power plant, and equipment to provide a suitable environment for plant growth, including a way to supply plants with the necessary mineral nutrients. All this constitutes the biomass production unit. There must also be food preparation facilities and a means to recycle or dispose of waste materials and there must be control equipment to keep the facility running. Humans are part of the system as well as plants and possibly animals. Human brain power will often be needed to keep the system functional in spite of the best computer-driven controls. The particulars of a CELSS facility depend strongly on where it is to be located. The presence of gravity on the Moon and Mars simplifies the design for a facility on those bodies, but a spacecraft in microgravity is a much more challenging environment. One problem is that plants, which are very sensitive to gravity, might not grow and produce food in the virtual absence of gravity. However, the experience with growing super-dwarf wheat in the Russian space station Mir, while not entirely successful because of the sterile wheat heads, was highly encouraging. The plants grew well for 123 days, producing more biomass than had been produced in space before. This was due to the high photon flux available to the plants and the careful control of substrate moisture. The sterile heads were probably due to the failure to remove the gaseous plant hormone, ethylene, from the Mir atmosphere. Since ethylene can easily be removed, it should be possible to grow wheat and other crops in microgravity with the production of viable seeds. On the ground Biosphere-2 taught us several lessons about the design and construction of a CELSS facility, but Bios-3 came much closer to achieving the goals of such a facility. Although stability was never completely reached, Bios-3 was much more stable than Biosphere-2 apparently because every effort was made to keep the system simple and to use the best technology available to maintain control. Wastes were not recycled in Bios-3 except for urine, and inedible plant materials were incinerated to restore CO2 to the atmosphere. Since much meat (about 20% of calories) was imported, closure in the Bios-3 experiments was well below 100%. But then, a practical CELSS on the Moon might also depend on regular resupply from Earth. Several important lessons have been learned from the CELSS research described in this review.

Agriculture↗