Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “ELECTRONICS”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 937 records · Page 52Linked to original sources

Target geometry dependence of electron energy loss spectra in scanning transmission electron microscopy (STEM).

In the frame of the Self-Energy formalism, we study the interaction between STEM electrons and small particles in the range of the valence electron excitations. We first calculate the energy loss probability for an isolated sphere and study the loss spectrum dependence on the size of the particle and on the relative impact parameter. Then we analyze the loss spectra in more realistic situations: (a) the effect of the coupling between the particle and supporting surface is studied in a simple geometrical model; and (b) we analyze the dependence of the losses on the geometrical shape of the target by considering hemispherical particle. Our results are in a good qualitative (and in simple cases, quantitative too) agreement with several experimental results which show anomalous excitations. We restate the suitability of the dielectric theory to study the surface excitations of these systems.

Microscopy, Electron, Scanning Transmission↗

[Study of the topography of the nitrogenase active center by the electron microscopy method with the use of the electron density labels].

The electron microscopy method has been used for studying the topography of the active centre of the nitrogenase in combination with the method of electron density labels. The active centre has been shown to place on the nitrogenase macromolecule asymmetrically. The non-heme iron atoms of the nitrogenase active centre have been regularly packed and located on the macromolecule as a quadrangular cluster closely to the surface of subunits. Two free sulfhydryl groups of the ATP-site of the nitrogenase active centre are in close proximity to the cluster. ATP-site of the nitrogenase active centre containing these groups is located on the Fe-enzyme, while the main part of the iron-containing cluster is located on the Mo-Fe-enzyme.

Adenosine Triphosphate↗

[Reaction of lymphatic heart muscle in the adult grass frog to autotransplantation. Electron microscopic and electron microscopic autoradiographic studies].

Cellular and subcellular responses, related to destruction, survival and regeneration of striated muscle fibers in the autografted intact lymph heart of the adult frog, were examined by electron microscopy and electron microscopical autoradiography. It has been shown that a small number of myofibers in the grafted lymph heart wall undergo an irreversible degeneration. Numerous myofibers retain their almost normal ultrastructure up to the end of the 1st posttransplantation week and later. However, a considerable part of surviving muscle fibers exhibited various degrees of reversible degenerative changes. Prominent morphological features of activation, related to the nuclear and cytoplasmic ultrastructural reorganization, were revealed in these reversibly degenerated myofibers since the middle of the second week after autotransplantation. It is shown that some myonuclei of these reactive fibers are able to synthesize DNA. No mitoses were observed in myonuclei. The number of satellite cells (normally approximately 11%) doubled by the end of the 3rd week of posttransplantation. Evidence was provided for the formation of some myotubes in the interstitium outside the basal membrane of the original muscle fibers. Cellular sources of regeneration are discussed in addition to peculiar reaction of lymph heart muscle fibers to free grafting.

Animals↗

Electronic, vibrational, and structural properties of a spin-crossover catecholato-iron system in the solid state: theoretical study of the electronic nature of the doublet and sextet states.

As a functional model of the catechol dioxygenases, [(TPA)Fe(Cat)]BPh4 (TPA = tris(2-pyridylmethyl)amine and Cat = catecholate dianion) exhibits the purple-blue coloration indicative of some charge transfer within the ground state. In contrast to a number of high-spin bioinspired systems, it was previously shown that, in the solid state, [(TPA)Fe(Cat)]BPh4 undergoes a two-step S = 1/2 = S = 5/2 spin-crossover. Therefore, the electronic and vibrational characteristics of this compound were investigated in the solid state by UV/Vis absorption and resonance Raman spectroscopies over the temperature range of the transition. This allowed the charge-transfer transitions of the low-spin (LS) form to be identified. In addition, the vibrational progression observed in the NIR absorption of the LS form was assigned to a five-membered chelate ring mode. The X-ray crystal structure solved at two different temperatures, shows the presence of highly distorted pseudo-octahedral ferric complexes that occupy two nonequivalent crystalline sites. The variation of the molecular parameters as a function of temperature strongly suggests that the two-step transition proceeds by a successive transition of the species in the two nonequivalent sites. The thermal dependence of the high-spin fraction of metal ions determined by Mössbauer experiments is consistent with the magnetic data, except for slight deviations in the high temperature range. The optimized geometries, the electronic transitions, vibrational frequencies, and thermodynamic functions were calculated with the B3LYP density functional method for the doublet and the sextet states. The finding of a ground state that possesses a significant mixture of Fe(III)-catecholate and FeII-semiquinonate configurations is discussed with regard to the set of experimental and theoretical data.

Journal Article↗

Contribution of osmium tetroxide to the image quality and detectability of iron in cells studied by electron spectroscopic imaging and electron energy loss spectroscopy.

The detection of elemental distributions within ultrastructural cellular components presents a number of challenges. There are many technical questions that need to be resolved including optimal fixation protocols. Another is the impact of heavy metals, such as osmium tetroxide (OsO4), on the detectability of other elements when OsO4 is used in chemical fixation protocols for biological samples. OsO4 was examined by varying its concentrations from 0% to 1% and time of fixation from 5 to 30 minutes with hamster alveolar macrophages. The morphological quality of cellular images observed and the detectability of iron using electron spectroscopic imaging (ESI) and electron energy loss spectroscopy (EELS) were evaluated. One percent OsO4 for 30 minutes in the chemical fixation protocol enhances the quality of the ESI and does not interfere with the ESI or EELS signal of iron. Positive results from both methods indicate the presence of the specific element. The loss of 59Fe during the chemical fixation procedure was also studied. Less than 10% was lost during the primary fixation step, but minimal losses occurred through dehydration, embedding, and sectioning. Careful technical assessment of the presence of an element as well as factors which might interfere with its detection is an important step in the application of any analytical microscopic technique.

Animals↗

Electronic substituent effects in the electron impact mass spectrometry of 2-(arylazo)-4-phenylphenols.

A mass spectrometric study of a set of six novel 2-(arylazo)-4-phenylphenols 1-6 was performed. The electron impact spectra were acquired and analyzed for five of the compounds in order to establish a fragmentation pattern. The suggested pathways were investigated and confirmed by means of tandem mass spectrometry (MS/MS) experiments together with high-resolution accurate mass data. However, the sixth molecule, a sodium sulfonate salt, was studied using fast atom bombardment (FAB) ionization in positive and negative modes. In addition, some electronic substituent effects were investigated by analyzing Hammett-McLafferty linear free energy correlations for some peaks derived from the corresponding molecular ions. Also, the role of the O-H...N hydrogen bond present in the target compounds was analyzed. The roles of these H-bonds were consistent with the corresponding acidity constant values obtained experimentally as well as by theoretical quantum chemistry calculations using HF/6-31 + G(d,p) and B3LYP/6-31G(d,p). Some spectrometric data were correlated with topological properties derived from the atoms-in-molecules (AIM) theory.

Journal Article↗

Light collection efficiency and light transport in backscattered electron scintillator detectors in scanning electron microscopy.

Experimentally, scintillator detectors used in scanning electron microscopy (SEM) to record backscattered electrons (BSE) show a noticeable difference in detection efficiency in different parts of their active zones due to light losses transport in the optical part of the detector. A model is proposed that calculates the local efficiency of the active parts of scintillator detectors of arbitrary shapes. The results of these calculations for various designs are presented.

Journal Article↗

The trajectories of secondary electrons in the scanning electron microscope.

Three-dimensional simulations of the trajectories of secondary electrons (SE) in the scanning electron microscope have been performed for plenty of real configurations of the specimen chamber, including all its basic components. The primary purpose was to evaluate the collection efficiency of the Everhart-Thornley detector of SE and to reveal fundamental rules for tailoring the set-ups in which efficient signal acquisition can be expected. Intuitive realizations about the easiness of attracting the SEs towards the biased front grid of the detector have shown themselves likely as false, and all grounded objects in the chamber have been proven to influence the spatial distribution of the signal-extracting field. The role of the magnetic field penetrating from inside the objective lens is shown to play an ambiguous role regarding possible support for the signal collection.

Journal Article↗

Laser flash photolysis experiments on the effects of freezing and salt addition on intramolecular electron transfer within one-electron reduced ascorbate oxidase.

Laser flash photolysis has been used to investigate the effects of freezing protein solutions and of adding various salts on the kinetics of one-electron photoreduction by 5-deazariboflavin semiquinone (5-DRFH.) of oxidized ascorbate oxidase (AO) from zucchini in 100 mM phosphate buffer (pH 7.0). The initial reaction between oxidized AO and 5-DRFH. is quite rapid (k approximately 10(8) M-1 s-1) and occurs at the blue Type I Cu center. Subsequent to this, a slower, protein concentration-independent intramolecular reoxidation of the Type I Cu is observed, with kET approximately 150 s-1, resulting in 40-50% reoxidation of the blue Cu center and the establishment of an electron transfer (ET) equilibrium between the various Cu centers in AO. When such a sample of AO was frozen overnight at -30 degrees C, flash photolysis of the thawed sample showed no effect on the kinetics of reduction of the Type I Cu by 5-DRFH. However, the rate constant for intramolecular ET decreased to a value of 2.7 s-1, with only 20% reoxidation of the Type I center. Reduction of the enzyme with ascorbic acid, followed by O2 oxidation, resulted in restoration of rapid intramolecular reoxidation (kET = 130 s-1), with 33% of the Type I Cu reduced by 5-DRFH. being reoxidized. These results are consistent with previous work which showed that samples of AO with initially low activity can be reactivated by ascorbic acid turnover in the presence of O2. When AO was frozen in the presence of ascorbic acid, similar inhibition of intramolecular ET was obtained, whereas upon turnover of this sample by further addition of ascorbic acid and exposure to O2, activity was not restored. The effects of addition of (NH4)2SO4, Na2SO4, NH4Cl, NaCl, KCl, and KF on the kinetics of Type I Cu reduction by 5-deazariboflavin semiquinone and on the subsequent intramolecular ET were also examined. A twofold increase in the bimolecular rate constant for reduction of the Type I Cu was observed for the two sodium salts at high concentrations (500 mM). Intramolecular ET was also significantly affected upon addition of all three chloride salts. Although the intramolecular ET rate constant was not altered, the fraction of reduced Type I Cu reoxidized by the trinuclear cluster decreased with increasing Cl- concentration, regardless of the cation. Total inhibition of intramolecular ET was observed at a significantly lower concentration of KF than observed with the Cl- salts. Sulfate ion had no effect on either parameter. These changes are thus ion specific, suggesting that they are related to ion binding by the protein, possibly at one of the coppers of the trinuclear cluster.

Ascorbate Oxidase↗

Electron microscope study on the occurrence of electron-dense deposits at the cell membrane of chicken erythrocytes.

Electron-dense deposits were found along the inner side of the cell membrane of chicken erythrocytes when fixed in a CaCl2-containing glutaraldehyde solution. Osteoblasts and osteoclasts were studied in an attempt to determine whether the deposits are related to calcium metabolism. No electron-dense deposits adjacent to the cell membrane were found in either these cells or in rat erythrocytes. Therefore, it is assumed that the deposits are not calcium-binding protein necessary for the cellular calcium uptake.

Animals↗

Demonstration of dopamine in electron-dense synaptic vesicles in the pars intermedia of Xenopus laevis, by freeze substitution and postembedding immunogold electron microscopy.

The presence of dopamine in the pituitary of the clawed toad Xenopus laevis was studied by light and electron microscope immunocytochemistry, using pre- and postembedding techniques. Light microscopy showed the presence of an intricate, anti-dopamine-positive fibre network throughout the pars intermedia. In preembedded stained material, dopamine appeared to occur in varicosities which make synaptic contacts with both folliculo-stellate cells and melanotrope cells. Post-embedding immunogold staining of freeze-substituted material permitted the localization of anti-dopamine reactivity in electron-dense vesicles in these varicosities. This finding supports the hypothesis that dopamine is involved in the (inhibitory) control of melanotrope cell activity in X. laevis.

Animals↗

Residues of pentachlorophenol and other chlorinated contaminants in human tissues: analysis by electron capture gas chromatography and electron capture negative ion mass spectrometry.

Samples of human tissues including testes, kidneys, prostate glands, livers, and adipose tissues removed at autopsy were analyzed for pentachlorophenol (PCP) and nonachloro-2-phenoxyphenol (NCPP); the fat samples were also analyzed for other chlorinated contaminants. Electron capture gas chromatography was used to quantitate the residues after isolation and cleanup. Identity of the residues was confirmed by electron capture negative ion mass spectrometry. All tissues analyzed for PCP tested positive with a range from 0.007 ppm (microgram/g) in subcutaneous fat to 4.14 ppm in testis. Residues of NCPP were much lower, ranging from levels below the detection limit to 0.59 ppm in testis. The highest average residues, based on the lipid content of the tissue, of PCP (1.09 ppm) and of NCPP (0.19 ppm) were found in testis followed by kidney (0.95 ppm PCP), prostate (0.84 ppm PCP), and liver (0.59 ppm PCP). Residues of these chemicals in the adipose tissues were on the average about 40 times lower than the residues in the non-fatty tissues. Other chlorinated contaminants found in the subcutaneous fat included hexa-, hepta-, and octa-chlorodibenzo-p-dioxins at sub-ppb levels and DDE averaging 2.47 ppm.

Adipose Tissue↗

Automated acquisition of cryo-electron micrographs for single particle reconstruction on an FEI Tecnai electron microscope.

AutoEM is a software package developed by Zhang et al. [J. Struct. Biol. 1356, 251] for semi-automated acquisition of cryo-electron micrographs from Tecnai series electron microscopes and is used frequently at the lowest level of automation. We report here on the new progress that we have made based on their preliminary work. A fourth low-dose state is created where the system can pre-select all the good holes in a grid square from a single CCD image taken at low magnification, making the system operative at much higher levels of automation. An additional control interface enables the operator to monitor the status of the program and the quality of the data, interact with the program, and direct the execution process according to intermediate results. When data acquisition is in progress, all useful information is automatically saved in certain text files which are easily accessible by a database. More detailed improvements and general advantages are illustrated and discussed. We have started to use the program to perform routine data collection. A number of applications show that the performance of the program is satisfactory and the quality of the micrographs and their power spectra acquired by the program is comparable to those manually collected under the same conditions.

Cryoelectron Microscopy↗

Radiation damage analysis of 7,7,8,8,-tetracyanoquinodimethane (TCNQ) and 2,3,5,6,-tetrafluoro-7,7,8,8,-tetracyanoquinodimethane (F4TCNQ) by electron diffraction and electron energy loss spectroscopy.

The electron irradiation sensitivity is compared between TCNQ and F(4)TCNQ. The characteristic doses, D(1/e), determined by the attenuation of the diffraction intensities are 0.08-0.11Ccm(-2) for TCNQ, and 0.04-0.06Ccm(-2) for F(4)TCNQ, respectively. It is found that F(4)TCNQ is more sensitive to radiation damage than TCNQ in spite of the substitution of hydrogen with fluorine. From electron energy-loss spectroscopy (EELS), it is found that the damaging process for the two materials begins in a similar way, as seen from mass loss and spectrum changes observed for doses which exceed the characteristic dose. Although sensitive to the sample orientation, the carbon K-edge fine structures of TCNQ are almost preserved below the critical dose. Theoretical calculation predicts that the scission of hydrogen contributes to the spectrum shape very little compared to nitrogen scission. Beyond the characteristic dose, fluorine loss from F(4)TCNQ occurs faster than nitrogen loss but little loss of carbon is observed. In a similar way, nitrogen loss from TCNQ occurs beyond the characteristic dose, while carbon appears constant. From detailed analysis of the carbon and nitrogen K-edge fine structures of TCNQ and F(4)TCNQ, it is found that the pi* peak of nitrogen in TCNQ decreases below the characteristic dose, while pi* loss of nitrogen in F(4)TCNQ, and pi* loss and sigma* increase of carbon in both materials are observed beyond the characteristic dose. The changes in the fine structures are believed to be due to the chemical alteration such as cross-linking, in which the pi-bonding system of nitrogen or carbon turns into sigma-bonding. The difference in characteristic dose between TCNQ and F(4)TCNQ is explained by considering "effective molecular occupancy", where F(4)TCNQ has a larger intermolecular empty space than TCNQ.

Journal Article↗

[Electronic learning: interactive learning in medicine or Socrates in electronic guise].

E-learning has been widely used for training in different fields. More recently, it was introduced during medical studies or for continuous medical education. The Canadian Universities are pioneers in e-learning creating special departments dedicated to pedagogy. Developing countries like Brazil or Central Europe have made some pilot experiments, which were successful. Several electronic companies have given a free access to the programmes and sites. The use of electronic media leads to an adaptation of teaching methods making them more interactive.

CD-I↗

Quantitative secondary electron energy filtering in a scanning electron microscope and its applications.

Two-dimensional dopant mapping in the scanning electron microscope (SEM) has recently attracted attention due to its ability to measure dopant levels rapidly with high spatial resolution while requiring little or no sample preparation. The dopant concentration could be derived from the energy distribution of secondary electrons emitted per doped region. However, the lack of reliable quantification, when standard SEM imaging is used, has so far hindered a wide application of the technique. This paper aims to resolve this problem with quantitative energy-filtering using a through-the-lens (TTL) detector in a field emission gun SEM (FEG-SEM). We have used the linear shift obtained in the SE energy distribution with variable specimen bias using sample containing copper wires, defined as the experimental detector response R(exp), to quantify the energy filtering. Using different experimental conditions, values of (2.42+/-0.04)<or=R(exp)<or=(3.01+/-0.05) were obtained. Results were validated by comparison with calculations obtained from ray-tracing simulations. Recommendations for the linear range of the TTL detector as an energy filter were established on the basis of these results. In addition, using our quantitative energy-filtering capabilities, the potential difference across a Si pn-junction was measured to be 0.81+/-0.10 V, which is in good agreement with the calculated value.

Journal Article↗

Damage to biological samples caused by the electron beam during electron microscopy.

A new method has been developed which measures directly the beam damage suffered by biological specimens in the electron microscope. This method involves the use of radioautography to measure specific radioactivity of labeled specimens, either exposed or unexposed to the beam. Using this technique, it has been found that macromolecular samples such as ribosomes and R17 virions are severely damaged during standard electron microscopic operations: from 15 to 40% of the mass of the sample may be lost in a 30 sec exposure to the beam.

Autoradiography↗

Structural determination of zinc dithiophosphates in lubricating oils by gas chromatography-mass spectrometry with electron impact and electron-capture negative ion chemical ionization.

Pentafluorobenzyl ester derivatives were used to identify zinc dialkyldithiophosphates and diaryldithiophosphates antiwear engine oil additives by GC-electron impact ionization (EI) MS and GC-electron-capture negative ion chemical ionization (ECNCI) MS analysis. GC-EI-MS of the dialkyldithiophosphate-pentafluorobenzyl derivatives afforded characteristic fragment ions corresponding to the cleavage of one and two alkyl radicals. In most cases, information was only obtained on one alkyl chain. Additional and complete information was obtained with retention time indices using synthetic derivatives and with GC-ECNCI-MS analysis. ECNCI afforded characteristic dithiophosphate anions which allowed the determination of the total number of carbon atoms in the alkyl radicals. The diastereoisomer mixtures of 2-hydroxy-sec.-alkyl radicals were completely separated on GC analysis.

Gas Chromatography-Mass Spectrometry↗