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Alkyl exchange reactions of organocobalt porphyrins. A bimolecular homolytic substitution reaction.

Reaction of organocobalt(III) porphyrins with a cobalt(II) complex of a distinguishable porphyrin or tetrapyrrole resulted in the reversible exchange of the organic axial ligand. The exchange reaction was facile in such solvents as benzene, toluene, dichloromethane, chloroform, and pyridine; was unaffected by total exclusion of light; was faster than would be expected for a homolytic process given known Co-C bond dissociation energies; and was of broad scope with respect to the organic ligand. Methyl, benzyl, primary alkyl, secondary alkyl, and acyl groups exchanged, but phenyl groups did not. The position of the exchange equilibrium was independent of the direction of approach and was nonstatistical. The relaxation to equilibrium appeared to be consistent with that of a second-order process. The rate of the reaction varied with the identity of the R group in the order Bzl > or = Me > Et approximately n-Pr > i-Pr > i-Bu > acetyl approximately neopentyl approximately 2-adamantyl. However, the total variation in reaction rates was remarkably small. Attempts to find evidence of free-radical intermediates by trapping with TEMPO or CO or by alkyl group interchange with an excess of an alkyl halide of a distinct alkyl group were unsuccessful over a time scale comparable to multiple half-lives of the exchange reaction. In addition, no rearrangement products were detected in exchange reactions of the 5-hexenyl group. Use of cobalt porphyrin reactants that were sterically encumbered on both faces with groups large enough to prevent formation of a bridged, Co-C-Co structure resulted in a 5 or more order of magnitude decrease in the rate of methyl exchange, if not its outright cessation, when run with total exclusion of light. The decrease in the rate of the thermal exchange process revealed the existence a slow photochemical exchange process that was driven by room lights. All evidence was consistent with a bimolecular S(H)2 mechanism for the thermal exchange mechanism.

Cobalt↗

Cobalt-catalyzed Heck-type reaction of alkyl halides with styrenes.

A cobalt complex, CoCl2[1,6-bis(diphenylphosphino)hexane], catalyzes an alkylation reaction of styrenes in the presence of Me3SiCH2MgCl in ether to yield beta-alkylstyrenes. A variety of alkyl halides including alkyl chlorides can be employed as an alkyl source. A radical mechanism is strongly suggested for this alkylation reaction.

Journal Article↗

Anti-Salmonella activity of alkyl gallates.

A series of alkyl gallates (3,4,5-trihydroxybenzoates) was synthesized and tested for their antibacterial activity against Salmonella choleraesuis. Nonyl (C(9)) and octyl (C(8)) gallates were noted to be the most effective against this food-borne bacterium, each with a minimum bactericidal concentration (MBC) of 12.5 microg/mL, followed by decyl (C(10)) gallate, with a MBC of 25 microg/mL. Dodecyl (C(12)) gallate exhibited activity against S. choleraesuis, with a MBC of 50 microg/mL. Propyl (C(3)) gallate showed no activity against S. choleraesuis up to 3200 microg/mL. The length of the alkyl group is not a major contributor but plays a role in eliciting the activity to a large extent. The same series of alkyl gallates, regardless of alkyl chain length, all showed nearly the same potent scavenging activity on the 1,1-diphenyl-2-picrylhydrazyl radical, indicating that the length of the alkyl group is not associated with the activity.

Anti-Bacterial Agents↗

Effects of alkyl substitutions of xanthine skeleton on bronchodilation.

Structure-activity relationships in a series of 1,3,7-trialkyl-xanthine were studied with guinea pigs. Relaxant actions in the tracheal muscle were increased with alkyl chain length at the 1- and 3-positions of the xanthine skeleton, but decreased by alkylation at the 7-position. Positive chronotropic actions in the right atrium were potentiated with 3-alkyl chain length but tended to decrease with 1-alkylation and diminish by 7-substitution. Consequently, while the 1- and 3-substitutions were equally important for the tracheal smooth muscle relaxation, the substitution at the 1-position was more important than the 3-substitution for bronchoselectivity. The 7-alkylation may be significant to cancel heart stimulation. There were good correlations between the smooth muscle relaxant action and the cyclic AMP-PDE inhibitory activity in 3-substituents and the affinity for adenosine (A1) receptors in 1-, 3-, and 7-substituents. This suggests that not only the cyclic AMP-PDE inhibitory activity but also the adenosine antagonistic activity is important in the bronchodilatory effects of alkylxanthines. Among these xanthine derivatives, 1-butyl-3-propylxanthine and its 7-methylated derivative showed high bronchoselectivity in the in vitro and in vivo experiments compared to theophylline and enprofylline and may be new candidates for bronchodilator.

3',5'-Cyclic-AMP Phosphodiesterases↗

Muscarinic cholinergic agonists and antagonists of the 3-(3-alkyl-1,2,4-oxadiazol-5-yl)-1,2,5,6-tetrahydropyridine type. Synthesis and structure-activity relationships.

A series of 3-(3-alkyl-1,2,4-oxadiazol-5-yl)-1,2,5,6-tetrahydro-1-methylpyr idines (2a-q) were synthesized and tested for central muscarinic cholinergic receptor binding affinity by using [3H]oxotremorine-M and [3H]QNB as ligands and in a functional assay using guinea pig ileum. The analogues with unbranched C1-8-alkyl substituents (2a-g) were agonists, whereas the compounds with branched or cyclic substituents (2h-m) were antagonists. The alkyl ether analogues (2o-q) were also agonists but had lower receptor binding affinity than the corresponding alkyl analogues. The 3-(5-alkyl-1,2,4-oxadiazol-3-yl)-1,2,5,6-tetrahydro-1-methylpyridi ne analogues had only ver low affinity for the central muscarinic receptors and were weak antagonists in the ileum assay. A few 3-(3-butyl-1,2,4-oxadiazol-5-yl)-1,2,5,6-tetrahydro-1-methylpyr idines substituted with methyl or hydrogen in the 1-, 5-, or 6-position were synthesized and tested. N-Desmethyl analogue 7 was a potent muscarinic agonist, whereas N-desmethyl-5-methyl analogue 11 and N-methyl-6-methyl analogue 13 both were antagonists with lower muscarinic receptor affinity. The 3-(3-butyl-1,2,4-oxadiazol-5-yl)quinuclidine (17) and tropane (15) analogues were both very potent antagonists with high affinity for central muscarinic receptors. The ratio [IC50(QNB)/IC50(Oxo-M)] x 0.162 proved to be a good indicator of the efficacy of the compounds in the guinea pig ileum assay.

Animals↗

Oxidation of 4-aryl- and 4-alkyl-substituted 2,6-dimethyl-3,5-bis(alkoxycarbonyl)-1,4-dihydropyridines by human liver microsomes and immunochemical evidence for the involvement of a form of cytochrome P-450.

4-Substituted 2,6-dimethyl-3,5-bis(alkoxycarbonyl)-1,4-dihydropyridines are important because of their roles as calcium channel blockers. The mixed-function oxidation of 14 4-aryl- and four 4-alkyl-substituted derivatives by human liver microsomes was examined. The major product of enzymatic oxidation of all the 4-aryl compounds was the pyridine derivative containing the 4-aryl group. The 4-alkyl compounds, in contrast, formed a pyridine derivative in which a hydrogen atom was present at the 4-position and the alkyl group was lost; these compounds also inactivated cytochrome P-450 and caused the loss of nifedipine oxidase activity after enzymatic oxidation. All of these reactions were extensively inhibited by an antibody raised to purified human liver nifedipine oxidase cytochrome P-450 (P-450NF), indicating a major role for this enzyme in the oxidation of these compounds. Oxidation of the 4-alkyl compounds led not only to the loss of P-450NF but also to decreases in catalytic activities of cytochrome P-450 isozymes catalyzing other reactions (phenacetin O-deethylation and hexobarbital 3'-hydroxylation). The results indicate that P-450NF (or closely related enzyme forms) is responsible for the oxidation of these nifedipine-related compounds in human liver microsomes and that metabolism is highly dependent upon 4-substitution; with alkyl substituents, radicals are postulated to leave P-450NF to attack other proteins.

Chemical Phenomena↗

Synthesis and antitumor activity of 10-alkyl-10-deazaminopterins. A convenient synthesis of 10-deazaminopterin.

Requirements for large-scale synthesis of the potent antitumor drug 10-deazaminopterin have led to development of a facile synthesis of this compound and its 10-alkyl analogues. The lithium diisopropyl amide generated dianions of appropriate p-alkylbenzoic acids were alkylated with 3-methoxyallyl chloride. The resulting 4-(p-carboxyphenyl)-1-methoxy-1-butenes were brominated at pH 7-8 to afford the 2-bromo-4-(p-carboxyphenyl)butyraldehydes. Condensation with 2,4,5,6-tetraminopyrimidine and subsequent in situ oxidation of the resulting dihydropteridines yielded crystalline 10-alkyl-10-deaza-4-amino-4-deoxypteroic acids. The pteroic acids were coupled with diethyl glutamate via the mixed anhydride method, followed by saponification at room temperature, to give the target 10-deazaminopterins. The 10-alkyl compounds were approximately equipotent to 10-deazaminopterin as growth inhibitors of folate-dependent bacteria. Their abilities to inhibit Lactobacillus casei and L1210 derived dihydrofolate reductases were also similar. Transport properties in vitro were suggestive of an improved therapeutic index for the 10-alkyl analogues. Against L1210 in mice, the percent increase in life span at the LD10 dosage was +151% (methotrexate), +178% (10-deazaminopterin), +235% (10-methyl analogue), and +211% (10-ethyl analogue). 10,10-Dimethyl-10-deazaminopterin was less effective at an equimolar dosage, but the ILS at the maximum dose tested (72 mg/kg) was +135%. It was far less toxic than the other analogues possibly because of enhanced clearance.

Aminopterin↗

Facile synthesis of platelet-activating factor and racemic analogues containing unsaturation in the sn-1-alkyl chain.

Platelet-activating factor, 1 (PAF, 1-O-hexadecyl-2-acetyl-sn-glycero-3-phosphocholine), and octadecyl-PAF were synthesized chemically as the racemates. The sn-1-O-alkyl isomers were isolated after treatment of the racemates with phospholipase A2 and subsequent reacetylation of the 1-O-alkyl-2-lyso-sn-glycero-3-phosphocholines released. Analogues of PAF containing unsaturated alkyl moieties at the sn-1 position (2, 4, 5) were synthesized by utilizing the methoxyethoxymethyl protecting group as a novel method for preparing unsaturated alkyl lipids. This procedure provides a facile means for preparing unsaturated either phospholipids of defined structure that may be tritiated to high radiospecific activity for metabolic studies. Unsaturation in the alkyl chain had minimal effect on the bioactivities examined in this study.

Animals↗

Titanocene-catalyzed carbosilylation of alkenes and dienes using alkyl halides and chlorosilanes

A new method for regioselective carbosilylation of alkenes and dienes has been developed by the use of a titanocene catalyst. This reaction proceeds efficiently at 0 degrees C in THF in the presence of Grignard reagents by the combined use of alkyl halides (R'-X, X = Br or Cl) and chlorotrialkylsilanes (R3''Si-Cl) as the alkylating and silylating reagents, respectively. Terminal alkenes having aryl or silyl substituents (YRC=CH2, Y = Ar or Me3Si, R = H or Me) afford addition products YRC-(SiR''3)-CH2R' in good yields, whereas 1-octene and internal alkenes were sluggish. When 2,3-disubstituted 1,3-butadienes were used instead of alkenes, alkyl and silyl units are introduced at the 1- and 4-positions giving rise to allylsilanes in high yields under similar conditions. The present reaction involves (i) addition of alkyl radicals toward alkenes or dienes, and (ii) electrophilic trapping of benzyl- or allylmagnesium halides with chlorosilanes. The titanocene catalyst plays important roles in generation of these active species, i.e., alkyl radicals and benzyl- or allylmagnesium halides.

Journal Article↗

Quinone methide phosphodiester alkylations under aqueous conditions.

A detailed analysis of the alkylation of phosphodiesters with a p-quinone methide under aqueous conditions has been accomplished. The relative rates of phosphodiester alkylation and hydrolysis have been examined by (1)H NMR analysis of the reaction of 2,6-dimethyl-p-quinone methide in a buffered diethyl phosphate/acetonitrile solution (1:9 v/v, pH 4.0). The rate of hydrolysis of the quinone methide was confirmed by UV analysis in 28.5% solutions of aqueous inorganic phosphate in acetonitrile at pH 4.0 and 7.0. Similarly, the rate of phosphodiester alkylations by the quinone methide was also confirmed by UV analysis in 28.5% solutions of aqueous dibenzyl, dibutyl, or diethyl phosphate in acetonitrile at pH 4.0 and 7.0. These kinetic studies further establish that the phosphodiester alkylation reactions are acid-catalyzed, second-order processes. The rate constant for phosphodiester alkylation was found to range from approximately 370-3700 times the rate constant of quinone methide hydrolysis with diethyl and dibenzyl phosphate, respectively (pH 4.0, 28.5% aqueous acetonitrile).

Acetonitriles↗

Reduction of organic halides with lanthanum metal: a novel generation method of alkyl radicals.

Results of the reaction of alkyl halides with lanthanum metal have been shown. The reduction of alkyl iodide with 1/3 equiv of lanthanum metal efficiently proceeded to give the corresponding reductive dimerized products along with the formation of reduction and dehydroiodination products. In the case of alkyl bromides and chlorides, the reaction did not proceed under the same reaction conditions as that of alkyl iodides; however, the reaction was dramatically promoted by the addition of a catalytic amount of iodine. A reaction pathway including alkyl radicals was suggested.

Journal Article↗

2-(Perfluoroalkyl)ethanols by Thermal Alkylation of Ambidentate Lactams with 2-(Perfluoroalkyl)-1-iodoalkanes, in the Presence of Added Water. A Change in Mechanism and Stoichiometry of the Reaction. Isolation of a Water Adduct of the Lactim Ether Intermediate.

Thermal alkylation of amides by an alkyl halide gives alcohols and esters, and the intriguing behavior of ambidentate lactams in this reaction with 2-(perfluoroalkyl)-1-iodoethanes and lactam 2 is summarized in Scheme 1. 2-(Perfluoroalkyl)ethanols (3) are the principal alkylation product, and there is obtained a range of coproducts in varying amounts. A lactim ether salt (6.HI) is the first reaction intermediate in a sequence of reactions. For delta-valerolactam (8) or epsilon-caprolactam (11), conversion to 3 falls precipitously and R(F)CH=CH(2) (4) becomes a major product. However, when water is introduced, alkylation rate of 2 by iodoalkane 1 increases, the conversion to 3 and 4 decreases, and a new lactim ether salt, 7.HI (the water adduct of 6.HI), is formed. Conversion to 3 is suppressed because coproduct 2 is weakly basic and the equilibrium lies on the side of the basic amine salt (7.HI). The mass spectrum of 2-hydroxy-2-[[(2-(perfluorohexyl)ethyl]oxy]pyrrolidine (7) includes the parent ion and a fragment (m/z = 131) of the intact pyrrolidine ring with an attached hydroxy group. Basic hydrolysis of product mixtures containing 7.HI in a protic solvent gives a high yield of 3 and 2. The higher lactams, 8 or 11, with 1 and water give the lactam salts efficiently; yield of 4 is low and yield of 3, by subsequent reaction with base, is high. With water present, the reaction rates of 8 and 1 are greater than for 2 and 1; water increases both the alkylation step and the water displacement step. Improved homogeneity of reaction mixtures and a specific solvent effect in which water stabilizes the bipolar transition state may be responsible for improved rates and yields.

Journal Article↗

Phosphodiester Alkylation with a Quinone Methide.

Despite the wide array of studies involving DNA alkylation and cleavage with quinone methide generating compounds, there have been no reports on the alkylation of phosphodiesters with quinone methides. We have investigated the reaction of dialkyl phosphates with a p-quinone methide in order to determine the potential for alkylation to produce trialkyphosphates. These studies have revealed that a phosphodiester can be alkylated with a p-quinone methide when promoted by a Brønsted acid. The role of the Brønsted acid is to sufficiently activate the p-quinone methide to allow phosphodiester addition to occur. The alkyl substituents of the phosphodiester have been found to effect the reactivity of the dialkyl phosphate under the reaction conditions examined. Equilibrium conversions up to 83% trialkyl phosphate formation have been achieved.

Journal Article↗

Greatly Simplified Procedures for the Synthesis of alpha-Amino Acids by the Direct Alkylation of Pseudoephedrine Glycinamide Hydrate.

A modified procedure for the synthesis of highly enantiomerically enriched alpha-amino acids is described that involves the direct alkylation of pseudoephedrine glycinamide hydrate (1.H(2)O) followed by hydrolysis. The modified procedure was developed to overcome several inconvenient aspects of our earlier reported procedure. Advantages of the new method include (1) a greatly simplified one-step synthesis of the alkylation substrate (1.H(2)O) by the direct combination of glycine methyl ester hydrochloride with pseudoephedrine in the presence of lithium tert-butoxide, (2) the use of the weaker base lithium hexamethyldisilazide (LHMDS) in lieu of lithium diisopropylamide (LDA) for the enolization reaction, (3) a protocol for the direct alkylation of 1.H(2)O without the need for prior drying of the alkylation substrate, and (4) a one-step alkylation procedure that generates LHMDS and anhydrous lithium chloride simultaneously from the reaction of lithium metal with n-hexyl chloride in the presence of hexamethyldisilazane.

Journal Article↗

Are the Duocarmycin and CC-1065 DNA Alkylation Reactions Acid-Catalyzed? Solvolysis pH-Rate Profiles Suggest They Are Not.

A study of the solvolysis pH-rate profiles for two key reactive CC-1065/duocarmycin alkylation subunit analogues is detailed. Unlike the authentic alkylation subunits and N-BOC-CBI (4) which are too stable to establish complete solvolysis pH-rate profiles, the analogues N-BOC-CBQ (5) and N-BOC-CNA (6) are reactive throughout the pH range of 2-12. Moreover, they possess progressively diminished vinylogous amide conjugation resulting in a corresponding progressively increasing reactivity adopting and reflecting conformations analogous to that proposed for DNA-bound CC-1065. For both, the acid-catalyzed reaction was observed only at the lower pH of 2-5, and the uncatalyzed solvolysis reaction rate dominated at pH >/=6, indicating that the CC-1065 and duocarmycin DNA alkylation reaction observed at pH 7.4 need not be an acid-catalyzed reaction. The studies provide further strong evidence that catalysis for the DNA alkylation reaction (pH 7.4) is derived from a DNA binding-induced conformational change in the agents that disrupts the stabilizing alkylation subunit vinylogous amide conjugation activating the agents for nucleophilic attack independent of pH.

Journal Article↗

Theory of alkyl-terminated silicon quantum dots.

We have carried out a series of ab initio calculations to investigate changes in the optical properties of Si quantum dots as a function of surface passivation. In particular, we have compared hydrogen-passivated dots with those having alkyl groups at the surface. We find that, while on clusters with reconstructed surfaces complete alkyl passivation is possible, steric repulsion prevents full passivation of Si dots with unreconstructed surfaces. In addition, our calculations show that steric repulsion may have a dominant effect in determining the surface structure and eventually the stability of alkyl-passivated clusters, with results dependent on the length of the carbon chain. Alkyl passivation weakly affects optical gaps of silicon quantum dots, while it substantially decreases ionization potentials and electron affinities and affects their excited state properties. On the basis of our results, we propose that alkyl-terminated quantum dots may be size selected, taking advantage of the change in ionization potential as a function of the cluster size.

Journal Article↗

Influence of single versus double hydrogen-bonding motif on the crystallization and morphology of self-assembling carbamates with alkyl side chains: model system for polyurethanes.

The difference in the morphology and crystallization aspects of hydrogen-bond-mediated self-assembling systems with single and double hydrogen-bonding motifs is studied here with carbamates as an example. These carbamates have alkyl side chains of various lengths, from C(4) to C(18). The biscarbamates with double hydrogen-bonding sites and symmetric substitution of alkyl segments show a significantly different morphological behavior as compared to the N-octadecyl carbamate alkyl esters (ref 5, referred to as simple carbamates henceforth) with a single hydrogen-bond motif and asymmetric substitution of alkyl side chains. In contrast to the simple carbamates in which no significant difference was found in the spherulite size from C(4) to C(12), with the biscarbamates we find that the spherulitic size, rate of growth of spherulites, and rate of crystallization show a maximum with an alkyl chain length of C(8). This is rationalized in terms of the relative contributions of the hydrogen-bond and van der Waals interaction energies. Oriented X-ray diffraction patterns from the fibrils of the spherulites lead to a model for the growth patterns of the hydrogen-bond planes and the molecular orientation in the spherulites.

Carbamates↗

Compression behavior of Langmuir-Blodgett monolayers of regioselectively substituted cellulose ethers with long alkyl side chains.

Regioselectively substituted alkylcellulose ethers having long alkyl side chains, 6-O- (6C18), 2,3-di-O- (23C18), and tri-O-octadecyl-cellulose (triC18) were successfully synthesized. The key step of these syntheses was removal of the residual alkylation reagent by an isothermal crystallization procedure to isolate and purify the compounds, since a physical entanglement between the long alkyl side chains in the cellulose derivatives and the reagent had caused difficulty in obtaining the purified derivatives. After the monolayers from these cellulose ethers were fabricated on a water surface, they were deposited on substrates by a vertical dipping method to be Langmuir-Blodgett (LB) monolayers. During the compression process of each monolayer, a surface pressure (pi)-area (A) isotherm behaved in a different way. Atomic force microscopy (AFM) was employed to interpret changes of the surface topography of the obtained LB monolayers depending on the surface pressure. The compressed 23C18 LB monolayer was observed to be more homogeneous than other samples. On the basis of the LB monolayer thickness estimated by AFM as well as X-ray reflection measurements, the 23C18 LB monolayer was assumed to possibly possess the vertical arrangement of an up-ordering of all the alkyl side chains on the individual glucose ring against the water surface. In other words, with increase in the surface pressure, the usual conformation of a 2(1) screw of cellulose backbone may be changed into an unusual conformation with a certain phi-psi dihedral angle resulting in 1-fold axis without a symmetry element. These results suggest that the formation of such compressed LB monolayers was strongly influenced by the hydrophobic interaction among the distribution of the long alkyl side chains in the anhydroglucose unit and further lack of inter- and/or intramolecular hydrogen bonds engaged in cellulose ethers, and as a result, those effects may even change the main chain conformation.

Journal Article↗