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The three-dimensional frequency organization of the inferior colliculus of the cat: a 2-deoxyglucose study.

The 3-dimensional (3-D) functional organization of the cat's inferior colliculus (IC) was examined using the 2-deoxyglucose method. Animals were dichotically stimulated with pure tone stimuli at an intensity of 80 dB SPL. Autoradiographic sections from these animals, cut in the three standard planes, were serially reconstructed to reveal the 3-D topography of the isofrequency sheets of labelling. In all 3-D reconstructions, the isofrequency sheets extend rostrocaudally through the IC with the rostral aspect of the sheet being situated more ventral than its caudal aspect. In the mediolateral dimensions, sheets are angled at between 40 degrees and 60 degrees to the horizontal, running from a dorsomedial to a ventrolateral position. The low-frequency sheets (0.5 and 2 kHz) are dorsolaterally convex and situated in the dorsolateral region of the IC. The 4 and 10 kHz isofrequency sheets have a helical structure and are situated in the mid-region of the IC. The high-frequency sheets (20 and 30 kHz) are dorsolaterally concaved and situated in the ventromedial region of the IC. The topography of these isofrequency sheets generally agree with, and extended our knowledge of, the tonotopic organization of the IC as derived from electrophysiological studies. The functional organization revealed by the 2-deoxyglucose method only partially correlated with the neural laminae in the anatomical models of the IC proposed by Rockel and Jones [J. Comp. Neurol. 147 (1973) 11-60] and Oliver and Morest [J. Comp. Neurol. 222 (1984) 237-264]. It is therefore concluded that the neural laminar organization of the IC may not be a necessary substrate for the tonotopic organization seen the IC.

Acoustic Stimulation↗

MR phase imaging to quantify bone volume fraction: computer simulations and in vivo measurements.

Magnetic resonance phase images can be used to assess trabecular bone by measuring the standard deviation of the phases in a region of interest. The standard deviation of regional phase measurements reflects the degree of magnetic field inhomogeneity caused by susceptibility differences between bone and marrow. A 3D computer model of trabecular bone was developed and then used to explore the influence of bone volume fraction and imaging parameters such as pixel size and slice width on the standard deviation of regional phase measurements. The results from these tests show that with appropriate selection of these parameters, phase spread strongly reflects variations in trabecular bone density (a correlation of R(2) = 0.98 with bone volume fraction between 0 and 10%). The technique was then applied in vivo on the radius of 25 patients who already had a bone density scan with peripheral quantitative tomography and a correlation between phase standard deviation and trabecular bone density was found (R(2) = 0.46).

Bone Density↗

When should Doppler-determined valve area be better than the Gorlin formula?: Variation in hydraulic constants in low flow states.

In low flow states, underestimation errors occur when the Gorlin formula is used to calculate valve area. A model of valvular stenosis designed to examine changes in the hydraulic discharge coefficient (Cd) and coefficient of orifice contraction (Cc) may explain these errors. Unsteady flow was examined in a pulsatile pump model and in a dog model. Valve areas were calculated from pressure and flow data using: a modified form of the Gorlin formula (assuming constant values for Cd and Cc) and a corrected formula (with values of Cd and Cc obtained from steady state data). Valve area was also calculated using the continuity equation with velocity and flow data (constant Cc). Flow velocities were measured using a newly designed ultrasound Doppler catheter capable of resolving flow velocities of up to 5.5 m/s. Both the corrected formula and continuity equation were highly predictive of actual valve area (r = 0.99, slope or M = 0.96 and r = 0.99, M = 1.06, respectively). The modified Gorlin equation was less accurate and tended to underestimate valve areas (r = 0.87, M = 0.83). This underestimation was most notable at low rates of flow (Gorlin: r = 0.94, M = 0.53; continuity: r = 0.93, M = 0.81 and r = 0.94, M = 0.89, respectively) more accurately than the modified Gorlin formula (r = 0.69, M = 0.49). In patients with low cardiac output, hemodynamic formulas, such as the Gorlin formula, which assume a constant value for the hydraulic discharge coefficient (Cd), may be less accurate than formulas using either a corrected value of Cd or Doppler-determined flow velocity and mean systolic flow.

Animals↗

Ex vivo human carotid artery bifurcation stenting: correlation of lesion characteristics with embolic potential.

PURPOSE: To develop an ex vivo human carotid artery stenting model that can be used for the quantitative analysis of risk for embolization associated with balloon angioplasty and stenting and to correlate this risk with lesion characteristics to define lesions suitable for balloon angioplasty and stenting. METHODS: Specimens of carotid plaque (n = 24) were obtained circumferentially intact from patients undergoing standard carotid endarterectomy. Carotid lesions were prospectively characterized on the basis of angiographic and duplex findings before endarterectomy and clinical findings. Specimens were encased in a polytetrafluoroethylene wrap and mounted in a flow chamber that allowed access for endovascular procedures and observations. Balloon angioplasty and stenting were performed under fluoroscopic guidance with either a Palmaz stent or a Wallstent endoprosthesis. Ex vivo angiograms were obtained before and after intervention. Effluent from each specimen was filtered for released embolic particles, which were microscopically examined, counted, and correlated with various plaque characteristics by means of multivariate analysis. RESULTS: Balloon angioplasty and stenting produced embolic particles that consisted of atherosclerotic debris, organized thrombus, and calcified material. The number of embolic particles detected after balloon angioplasty and stenting was not related to preoperative symptoms, sex, plaque ulceration or calcification, or artery size. However, echolucent plaques generated a higher number of particles compared with echogenic plaques (p < 0.01). In addition, increased lesion stenosis also significantly correlated with the total number of particles produced by balloon angioplasty and stenting (r = 0.55). Multivariate analysis revealed that these two characteristics were independent risk factors. CONCLUSIONS: Echolucent plaques and plaques with stenosis > or = 90% produced a higher number of embolic particles and therefore may be less suitable for balloon angioplasty and stenting. This ex vivo model can be used to identify high-risk lesions for balloon angioplasty and stenting and can aid in the evaluation of new devices being considered for carotid balloon angioplasty and stenting.

Angioplasty, Balloon↗

Intraocular lens surfaces and their relationship to postoperative glare.

PURPOSE: To estimate the potential for surface reflections in recently introduced intraocular lenses (IOLs) and to determine optic surface designs that will reduce surface reflections. SETTING: Mayo Clinic, Rochester, Minnesota, USA. METHODS: Surface-reflected glare in the unaccommodated human crystalline lens and in 6 IOLs (Bausch & Lomb SoFlex LI61U, Pharmacia CeeOn 911A, Allergan Sensar AR40, Bausch & Lomb Hydroview H60M, Alcon AcrySof MA60BM, Alcon AcrySof SA30AL) was examined in a physiologic eye model using the ZEMAX optical design program. Internal and external surface reflections were described and compared in terms of IOL surface reflectivity (%), area of the reflected glare image (mm(2)), and relative intensity of the reflected glare image. RESULTS: Compared to surface reflections from the unaccommodated human lens with a corneal power of 43.0 diopters, all the IOLs increased the relative intensity of internal and external reflections by 3- to 36-fold except the MA60BM and the SA30AL, which increased the relative intensity of internal and external reflections by 730- to 1090-fold. CONCLUSIONS: All the IOLs studied variably increased internal and external surface reflections when compared to the human crystalline lens. Surface reflections were minimized in optic designs with an anterior radius of curvature of approximately 17.0 mm or less.

Accommodation, Ocular↗

An assisted automated procedure for vessel geometry reconstruction and hemodynamic simulations from clinical imaging.

In this paper a method is described to obtain realistic 3-D geometric models of vascular districts from clinical tomographic 3-D images. The aim is the simulation of individual local hemodynamics by means of computational fluid-dynamics (CFD). As a test case, the method is applied to the carotid bifurcation. Attention is focused on the minimisation of the time demanding costs. The proposed procedure has been automated whenever possible and takes about 2h from the acquisition of the images to the attainment of the simulation results, a time lapse compatible with diagnostic exigency.

Aged↗

Marching cube algorithm: review and trilinear interpolation adaptation for image-based dosimetric models.

Current internal organ dose assessment methodologies utilize three-dimensional (3D) medical images of the body to model organ shapes and tissue interfaces. These models are coupled to computer programs that measure radionuclide energy deposition or chord-length distributions directly within these images. Previous studies have shown that the rectangular shape of image voxels generates voxel effects that alter the outcome of these calculations. To minimize voxel effects, the present study proposes to use the Marching Cube (MC) algorithm to generate isosurfaces delineating tissue interfaces from the gray-level images. First, a review of the different techniques surrounding the MC algorithm is presented. Next, an adaptation of the algorithm is proposed in which a trilinear interpolation of the gray levels is used to generate a hyperboloid surface within the MCs. This new technique is shown to solve the classic ambiguity problem of the MC algorithm and also to reduce the data size inherent to the triangulated surface. It also provides a simple algorithm to accurately measure distances within the image. The technique is then tested with a mathematical model of trabecular bone. The trilinear interpolation method is shown to remove voxel effects and to produce reliable chord-length distributions across image regions. The technique is thus recommended for use with digital medical images needed for internal radiation transport simulations. The current study is performed for a single isosurface that separates two media within the same image, but it is proposed that the technique can be extended to multiple isosurfaces that delineate several organs or organ regions within 3D tomographic voxels of human anatomy.

Algorithms↗

CAD by processing of computed tomography data and CAM of individually designed prostheses.

In the past an economic fabrication of individual prostheses used in reconstructive cranio-maxillo-facial surgery was not possible due to technical deficiencies. Now, through the consistent use of the most modern computer-based techniques developed in the field of industrial engineering, these costs can be reduced to an economic level. Mathematical freeform surfaces models are first created from helical computed tomography data. These serve as the basis for an efficient and idealized construction of prostheses geometries, and provide control-data for a computerized numerical control-fabrication. In 4 clinical cases this new processing technique has successfully been utilized in the fabrication of individually designed prostheses for the reconstruction of skull defects. The range of opportunities offered is reflected not only in the great variety of possible geometric details, but also in the fact that the prostheses may be manufactured--partly using indirect impression-taking techniques--from 3 different biocompatible materials so far and other applications are likely to turn up.

Computer Simulation↗

Spatial regulation of DELTA expression mediates NOTCH signalling for segmentation of Drosophila legs.

The Notch (N) signalling pathway is recruited for segregation of cell fates in a number of Drosophila tissue types. We show here that N dependent segmentation of Drosophila legs is regulated by a dynamic pattern of expression of its ligand, DELTA (DL). During third larval instar and early stages of pupation, high levels of DL expression is seen in stripes of cells in the leg imaginal discs which later form the proximal borders of leg joints. These domains also displayed heightened Dl enhancer activity. During subsequent stages of pupation, following segmentation of the leg primordium, DL expression becomes uniform throughout these segments barring the joints. We further show that regulatory Dl mutations or mis-expression of DL abolish leg segmentation. Domains of N signalling for segmentation of legs of flies are thus set up by a stringent spatial regulation of expression of its ligand at the segment border. Further, a comparable role of DL in antennal development reveals a common paradigm of DL-N signalling for segmentation of appendages in flies.

Animals↗

Identification of a regulatory allele of teashirt (tsh) in Drosophila melanogaster that affects wing hinge development. An adult-specific tsh enhancer in Drosophila.

A cis-acting regulatory element defined herein is required to drive teashirt (tsh) expression in the regions of the developing adult that give rise to proximal wing and haltere tissues. Loss of this expression results in the fusion of the proximal structures of the wing and halteres to the thoracic cuticle. This represents the first description of a viable adult-specific regulatory allele of tsh with a visible phenotype, and it enlarges our understanding of the expression of tsh and its function during the development of the adult.

Alleles↗

Assessing lung deposition of inhaled medications. Consensus statement from a workshop of the British Association for Lung Research, held at the Institute of Biology, London, U.K. on 17 April 1998.

In vitro measurements of aerosol fine particle fraction (FPF) using particle-sizing apparatus (e.g. the twin impinger, multi-stage liquid impingers, cascade impactors) have a key role to play in the development of new pharmaceutical products and in quality control. However, use of in vitro methodology to attempt to predict lung deposition in vivo is of limited value due, in part, to the inability of current apparatus to mimic upper and lower airway anatomy satisfactorily. Estimates of FPF based on cut-off points ranging from 5-7 microns generally overestimate lung deposition as measured in vivo by gamma scintigraphy. We recommend that: 1. multistage apparatus (minimum five stages) be used to characterize particle size distribution adequately, over the range 0.5-5.0 microns; 2. where possible, measurements should be made at a range of rates and profiles of flow reflecting those likely to be generated using the inhalation device in clinical practice (including use by young and elderly patients with varying degrees of airflow obstruction); 3. encouragement should be given to the further development, standardization, and validation of apparatus with a 'throat' which more closely resembles the human oropharynx and larynx. Pharmacokinetic methods can give a good estimate of total, but not regional, lung deposition, with drugs which are either not absorbed via the gastrointestinal tract, or whose absorption can be blocked by co-administration of charcoal, thus avoiding confounding by absorption of drug substance deposited in the oropharynx and subsequently swallowed. Techniques which rely on evaluation of a timed fractional output of drug substance in the urine are susceptible to the inherent variability of rate of absorption across the respiratory epithelium. We recommend that consideration should be given to the further refinement and validation of PK methods which would more clearly identify the fractional dose deposited in the lung. Lung-imaging methodology, e.g. gamma scintigraphy, employing formulations radiolabelled with gamma-ray-emitting radionuclides such as 99mTc, can measure total lung deposition and oropharyngeal deposition, provided that the radiolabelling process is appropriately validated and suitable corrections are made for attenuation of gamma rays by body tissues. An estimate of regional lung deposition can be made by drawing 'regions of interest' on the scintigraphic image; the precision of this measure is limited by the two-dimensional (2-D) nature of most images which mean that there is an overlay of structures of interest (alveoli, small and large airways), which is most marked centrally. Three-dimensional (3-D) imaging techniques (e.g. single photon emission computed tomography, SPECT, and positron emission tomography, PET) have the potential to give more detailed data on regional lung deposition, but are currently more expensive, employ higher radiation doses, and are less well validated than 2-D (planar) imaging. We consider that, of the available imaging modalities, planar gamma scintigraphy represents current best practice for the assessment of lung deposition from inhaler devices where regional differences may be important. The methodology should be optimized by the adoption of generally accepted standards for radiolabelling, imaging, attenuation correction, and interpretation. It is important that deposition in all sites (device, oropharynx, lungs, stomach) should be quantified. Consideration should be given to refining the concept of regions of interest to coincide more closely with anatomical lung structures. Statistical methods to compare the size distributions of drug and radiolabel in validation experiments should be developed. In the longer term it is envisaged that three-dimensional imaging may play a more important part in evaluating lung deposition; an optimal three-dimensional anatomical model of lung zones of interest needs to be developed.

Administration, Inhalation↗

Homology modelling of the nuclear receptors: human oestrogen receptorbeta (hERbeta), the human pregnane-X-receptor (PXR), the Ah receptor (AhR) and the constitutive androstane receptor (CAR) ligand binding domains from the human oestrogen receptor alpha (hERalpha) crystal structure, and the human peroxisome proliferator activated receptor alpha (PPARalpha) ligand binding domain from the human PPARgamma crystal structure.

We have generated by homology the three-dimensional structures of the ligand binding domain (LBD) of several interrelated human steroid hormone receptors (SHRs). These are the oestrogen receptor beta (hERbeta), the pregnane-X-receptor (PXR), the Ah receptor (AhR) and the constitutive androstane receptor (CAR). They were produced by homology modelling from the human oestrogen receptor alpha (hERalpha) crystallographic coordinates [Nature 389 (1997) 753] as a template together with the amino acid sequences for hERbeta [FEBS Lett. 392 (1996) 49], PXR [J. Clin. Invest. 102 (1998) 1016], AhR [Proc. Natl. Acad. Sci. U.S.A. 89 (1992) 815] and CAR [Nature 395 (1998) 612; Mol. Cell. Biol. 14 (1994) 1544], respectively. The selective endogenous ligand, in each case, was docked interactively within the putative ligand binding site using the position of oestradiol in hERalpha as a guide, and the total energy was calculated. In each receptor model a number of different ligands known to fit closely within the ligand binding site were interactively docked and binding interactions noted. Specific binding interactions included combinations of hydrogen bonding and hydrophobic contacts with key amino acid sidechains, which varied depending on the nature of the ligand and receptor concerned. We also produced the human peroxisome proliferator activated receptor alpha (PPARalpha) by homology modelling using the human PPARgamma (hPPARgamma) LBD crystallographic coordinates summarised in [Toxicol. In Vitro 12 (1998) 619] as a template together with the amino acid sequence for hPPARalpha [Toxicol. In Vitro 12 (1998) 619; Nature 395 (1998) 137]. The models will provide a useful tool in unravelling the complexity in the physiologic response to xenobiotics by examining the ligand binding interactions and differences between the steroid hormone receptors activation or inactivation by their ligands.

Amino Acid Sequence↗

System design for in vivo neutron activation analysis measurements of manganese in the human brain: based on Monte Carlo modeling.

Manganese is an essential nutrient required by the human body, but conversely, over exposure to the element may cause central nervous system damage. The technique of in vivo neutron activation analysis, using the McMaster KN-accelerator, is being investigated as a possible method of noninvasively determining manganese concentrations within the human body. Since the brain is the primary target of damage from exposure it would be the ideal site for measurements. Thus, Monte Carlo simulations have been undertaken to define the optimum experimental parameters for such a measurement, examining the use of possible moderator, reflector and collimator materials.

Basal Ganglia↗

Monte Carlo design study for in vivo bone aluminum measurement using a low energy accelerator beam.

The need for aluminum monitoring exists in occupational medicine, as well as for the clinical monitoring of patients with renal dysfunction. After the development of an appropriate neutron source card, Monte Carlo simulations were made to design moderator/reflector assembly consisting of a polyethylene moderator (2 cm) and graphite reflector (30 cm), surrounded by a boronated (5%) wax (20 cm) and lead (1 cm) shield. This design should allow for the bone aluminum measurement of healthy subjects, but prior to that detailed microdosimetry is necessary to address a noticed disagreement between theoretical and experimental dose data.

Aluminum↗

Improving the in vivo X-ray fluorescence (XRF) measurement of renal mercury.

In vivo polarised X-ray fluorescence (XRF) measurements of renal mercury have previously been reported (Börjesson J, Barregård L, Sällsten G, Schütz A, Jonson R, Alpsten M, Mattsson S, 1995. In vivo XRF analysis of mercury: the relation between concentrations in the kidney and the urine. Phys. Med. Biol. 40, 413-426). However, with the detection limit reported therein, this system is limited to measurements in cases of significant mercury exposure. An improvement in detection limit is desirable to produce a tool capable of occupational monitoring in cases of mild to moderate exposure. Therefore, design changes have been investigated to improve system performance. Through Monte Carlo simulation and experiment, optimal parameters were determined with respect to polarisation and filtration, as well as the ideal X-ray tube voltage. The optimal configuration will be discussed. A preliminary comparison in terms of minimum detectable limit (MDL) will be made with the preceding polarised XRF renal mercury system.

Filtration↗

Photoelastic analysis of internal screw fixation after sagittal split ramus osteotomy.

An experimental study on mechanical behavior and stability of internal screw fixation (ISF) of sagittal split ramus osteotomy has been carried out. A stress freezing method in a three-dimensional photoelastic experiment was used. Four ISF's that utilized different screw placement patterns were used for photoelastic analysis: (1) 3 screw linear pattern placed at 90 degrees to the lateral surface of the model; (2) triangular pattern at 90 degrees to the surface of the model, 2 above and 1 below the mandibular canal; (3) 2 screw linear pattern at 90 degrees, and (4) 3 screw oblique linear pattern at 75, 60 and 45 degrees to the surface of the model. The stress distribution differs markedly according to these 4 methods.

Bone Screws↗

A computerized non-invasive method for the assessment of human facial volume.

The three-dimensional coordinates of 22 standardized soft-tissue facial landmarks were used in the definition of a three-dimensional model of the adult human face. The model allows the estimation of the volume of the face in toto and of its parts (upper, middle and lower thirds, nose). Landmark coordinates were collected in 80 healthy young adults (40 men and 40 women selected according to criteria of dentofacial normality) by infrared photogrammetry by an automated instrument, and facial volumes calculated. Sample variability was larger in women than in men; the nose and the upper third of face had the largest variability regardless of gender. On average, all volumes computed in men were significantly larger than the corresponding values computed in women. Also the lower-to-middle third face ratio was significantly higher in men than in women. The sexual dimorphism in human facial volume did not involve the different parts of the face to the same extent: a large part of male facial volume preponderance was explained by the lower third of face. The proposed facial model could adequately represent the human face in all those research and clinical fields where noninvasive surface measurements could be employed alone or in support of conventional radiographic data.

Adult↗

Colour stereolithography for planning complex maxillofacial tumour surgery.

High-precision anatomical facsimile models of the patients' skulls, individually produced by colour stereolithography, were used in the preoperative planning for seven patients with complex maxillofacial tumours. Selectively coloured models facilitated the management of ablative surgery and reconstructive procedures as well. The indicators for preoperative colour stereolithographic model planning concerning maxillofacial tumour surgery are discussed.

Color↗