Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “LIGNIN”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 919 records · Page 51Linked to original sources
PubMed1991

A novel extrachromosomally maintained transformation vector for the lignin-degrading basidiomycete Phanerochaete chrysosporium.

A stable extrachromosomally maintained transformation vector (pG12-1) for the lignin-degrading filamentous fungus Phanerochaete chrysosporium is described. The vector is 6.3 kb and contains a Kanr marker, pBR322 ori, and a 2.2-kb fragment (ME-1) derived from an endogenous extrachromosomal DNA element of P. chrysosporium. Vector pG12-1 was able to transform P. chrysosporium to G418 resistance and was readily and consistently recoverable from the total DNA of transformants via Escherichia coli transformation. Southern blot analyses indicated that pG12-1 is maintained at a low copy number in the fungal transformants. The vector is demonstrable in the total DNA of individual G418-resistant basidiospore progeny of the transformants only after amplification by polymerase chain reaction. Exonuclease III and dam methylation analyses, respectively, indicated that pG12-I undergoes replication in P. chrysosporium and that it is maintained extrachromosomally in a circular form. The vector is stably maintained in the transformants even after long-term nonselective growth. There is no evidence for integration of the vector into the chromosome at any stage.

Base Sequence↗
PubMed1975

Mutualistic degradation of the lignin model compound veratrylglycerol-beta-(o-methoxyphenyl) ether by bacteria.

Complete degradation of the lignin model compound veratrylglycerol-beta-(o-methoxyphenyl) ether is accomplished mutualistically by a two-membered bacterial culture. Bacterial isolate E1, which has been tentatively identified as an Acinetobacter, grows on veratrylglycerol-beta-(o-methoxyphenyl) ether producing guaiacol (o-methoxyphenol) as a non-metabolizable, bacteriocidal by-product. When Nocardia corallina (strain A81) is also present in media containing veratrylglycerol-beta-(o-methoxyphenyl) ether as the only carbon/energy source, it is able to grow on the guaiacol produced from veratrylglycerol-beta-(o-methoxyphenyl) ether by isolate E1. Strain A81 alone does not grow on veratrylglycerol-beta-(o-methoxyphenyl) ether. In the absence of strain A81, isolate E1 is rapidly killed by accumulated guaiacol. In the presence of the Nocardia, isolate E1 maintains its viability.

Acinetobacter↗
PubMed1990

Multinucleation of macrophages with water-solubilized lignin derivatives in vitro.

When macrophages derived from bone marrow were incubated with lignin derivative at 10 micrograms/ml, they formed multinucleated giant cells containing more than sixty nuclei. Cine-microscopic observation revealed that the formation of the giant cells was due to cell fusion. This phenomenon was specific for primary-cultured macrophages, and was not observed with either a macrophage cell line or established cell lines derived from other tissues.

Animals↗
PubMed1997

Characterization of a cytotoxic factor induced in murine serum after the intravenous administration of dehydrogenation polymers of phenylpropenoids (a class of synthetic lignins).

A cytotoxic factor (CF) appeared in murine serum after the intravenous injection of the dehydrogenation polymers (DHPs) of p-coumaric acid (DHP-pCA), caffeic acid (DHP-CA), and ferulic acid (DHP-FA), which are categorized as a class of synthetic lignins. The highest CF activity was observed 15 min after the i.v. injection of DHP-pCA. CF is likely to be cytocidal through an apoptotic mechanism accompanied by nucleosome-sized DNA fragmentation. CF is extractable with aqueous ethanol and highly stable against heat, proteases, and acid/alkali treatments. The ethanol extract showed cytotoxicity toward various cultured cell lines and also ascites carcinoma cells in vivo. The parent molecules DHPs did not show any appreciable cytotoxicity. After the induction of CF activity, the activity quickly diminished and completely disappeared from the blood stream within an hour or so. The cytotoxicity was observed only when the target cells were exposed to CF for longer than 10 h.

Animals↗
PubMed2006

Lig-8, a bioactive lignophenol derivative from bamboo lignin, protects against neuronal damage in vitro and in vivo.

Lig-8, a lignophenol derivative from bamboo lignin, potently suppresses oxidative stress-induced apoptosis. Here, we first examined in vitro whether lig-8 protects against neuronal damage induced by oxygen-glucose deprivation (OGD) followed by reoxygenation, tunicamycin [endoplasmic reticulum (ER)-stress inducer], or PSI (proteasome inhibitor). In pheochromocytoma (PC12) cell cultures, lig-8 (1 to 30 microM) concentration-dependently inhibited OGD- and tunicamycin (2 microg/ml)-induced cell deaths (significant at >/=3 microM and >/=1 microM, respectively). In human neuroblastoma (SH-SY5Y) cell culture, the PSI-induced apoptotic cell death and fusion protein accumulation (revealing reduced proteasome activity) was inhibited by lig-8 (30 microM). On the other hand, lig-8 at 30 microM alone did not affect any proteasome activity under resting conditions. In vivo, lig-8 (0.1 nmol/eye) reduced intravitreal N-methyl-D-aspartate (NMDA, 20 nmol)-induced retinal damage (decreases in retinal ganglion cells and inner plexiform layer thickness). Hence, lig-8 protects, partly by inhibiting excessive ER-stress, against neuronal damage in vitro and in vivo.

Animals↗
PubMed2006

Isolation and characterization of Streptomyces sp. NL15-2K capable of degrading lignin-related aromatic compounds.

Strain NL15-2K was isolated from soil by screening for bacteria capable of catabolizing lignin-related aromatic acids. This isolate was identified as a Streptomyces sp. on the basis of morphology and an analysis of its 16S rRNA gene sequence. NL15-2K utilized caffeic acid, coniferyl alcohol, ferulic acid, isovanillic acid, protocatechuic acid, vanillic acid, vanillin, and veratric acid as sole carbon sources.

Benzaldehydes↗
PubMed2000

Degradation of bisphenol A by the lignin-degrading enzyme, manganese peroxidase, produced by the white-rot basidiomycete, Pleurotus ostreatus.

Degradation of 2,2-Bis(4-hydroxyphenyl)propane (bisphenol A, BPA), an endocrine-disturbing chemical, by the growing mycelia of the white-rot basidiomycete, Pleurotus ostreatus, was examined. About 80% of BPA initially present decreased in 12 days of culture with this fungus. By in vitro experiments using the lignin-degrading enzyme manganese peroxidase (MnP), BPA was metabolized to phenol, 4-isopropenylphenol, 4-isopropylphenol, and hexestrol. The degradation products of BPA were assumed to be formed by the one-electron oxidation of the substrate.

Air Pollutants, Occupational↗
PubMed2004

Fourier transform Raman difference spectroscopy for detection of lignin oxidation products in thermomechanical pulp.

Spruce thermomechanical pulp (TMP) was oxidized by the 2,2'azinobis-3-ethylbenzthiazoline-6-sulfonate cation radical (ABTS*+) in the presence and absence of oxygen. The pulp modification was monitored by Fourier transform (FT) Raman difference spectroscopy and other nondestructive spectroscopic methods. The ABTS*+ oxidative system resulted in modifications very similar to the laccase-ABTS-oxygen system, except for the FT-Raman results, which showed a difference in mechanisms attributed to a difference in produced Raman bands. Oxygen resulted in no oxygen-derived products, but only enhanced the production of a specific Raman band of several oxidation-produced bands. Detailed information on lignin reactions can be obtained from FT-Raman signals.

Hot Temperature↗
PubMedDate not supplied

Influence of media nutrients on synthesis of lignin peroxidase from Aspergillus sp.

The effect of carbon and nitrogen sources, lignocellulosic substrates, and metal ions on lignin peroxidase (LiP) activity of Aspergillus sp., which was isolated from a mangrove area, was studied. Glucose (1%) was found to be the best carbon source. Among the various lignocellulosic substrates used, coir pith at 3% concentration increased LiP activity twofold on the second day of incubation. Peptone and KNO3 completely inhibited the enzyme synthesis while (NH4)2SO4 at 12.5 mM produced maximum activity. Since seawater contained all the requisite metal ions, any added ions had a negative effect on activity. Cu2+ had the most inhibiting effect while K+ the least. When all the optimized conditions were provided, in nitrogen- and carbon-sufficient medium, a maximum LiP activity of 345 U/mL was obtained on the second day of incubation.

Ammonia↗
PubMed2003

Estimation of solubility effect on the herbicide controlled-release kinetics from lignin-based formulations.

Understanding the main phenomena involved in the controlled-release kinetics of herbicides in a water bath is a very important requisite for diffusive- parameter estimation, because, some mathematical models based on Fick's second law for diffusion have been developed to describe the controlled-release kinetic data. However, the validity of these models is restricted to the following assumptions: (1) the formulation is an isothermal slab; (2) the release occurs through the two faces of the slab; (3) the herbicide is dissolved in the water contained in the slab pores at a concentration less than the saturation concentration (cis); (4) the total sum of the individual volumes of the pores is epsilonAL (epsilon is the slab porosity, A is the slab area, and L is the slab thickness); and (5) the initial concentration of herbicide in the pores is M0/epsilonAL (M0 is the initial amount of herbicide in the matrix). The fourth assumption may be invalid for mathematical description of systems in which the herbicide concentration in the slab may be above the saturation concentration. If this were true, the final assumption would also be invalid, because the initial concentration of herbicide in the pores is cis in this case. This work presents a study of the solubility effect on the controlled-release kinetics of herbicides from lignin matrices.

Cellulose↗
PubMed2005

Integrated processes for use of pulps and lignins obtained from sugarcane bagasse and straw: a review of recent efforts in Brazil.

Sugarcane bagasse and straw can be converted into pulps, oils, controlled-release formulations, chelating agents, and composites. This article reviews bagasse and straw conversion efforts in Brazil. Laboratory-scale processes were developed aiming at the integral use of these biomass byprod ucts. Organosolv pulping and oxidation of lignin are the most promising processes for the rational use of sugarcane residues. Fungal pretreatment and spectroscopic characterization are also discussed.

Brazil↗
PubMed2000

Mathematical modeling of controlled-release systems of herbicides using lignins as matrices. A review.

The herbicides applied in soils can be easily lost, owing to leaching, volatilization, and bio- and photodegradation. Controlled-release systems using polymeric matrices claim to solve these problems. The movement of the herbicides in the soil is also an important phenomenon to be studied in order to evaluate the loss processes. The development of mathematical models is a relevant requirement for simulation and optimization of such systems. This study reviews mathematical models as an initial step for modeling data obtained for controlled-release systems of herbicides (diuron, 2,4-dichlorophenoxyacetic acid, and ametryn) using sugarcane bagasse lignin as a polymeric matrix. The release kinetic studies were carried out using several acceptor systems including a water bath, soil, and soil-packed columns. Generally, these models take into account phenomena such as unsteady-state mass transfer by diffusion (Fick's law) and convection, consumption by several processes, and partitioning processes, resulting in partial differential equations with respect to time and space variables.

Delayed-Action Preparations↗
PubMed2001

Fourier transform infrared quantitative analysis of sugars and lignin in pretreated softwood solid residues.

Hydrolysates were obtained from dilute sulfuric acid pretreatment of whole-tree softwood forest thinnings and softwood sawdust. Mid-infrared (IR) spectra were obtained on sample sets of wet washed hydrolysates, and 45 degrees C vacuum-dried washed hydrolysates, using a Fourier transform infrared (FTIR) spectrophotometer equipped with a diamond-composite attenuated total reflectance (ATR) cell. Partial least squares (PLS) analysis of spectra from each sample set was performed. Regression analyses for sugar components and lignin were generated using results obtained from standard wet chemical and high-performance liquid chromatography methods. The correlation coefficients of the predicted and measured values were >0.9. The root mean square standard error of the estimate for each component in the residues was generally within 2 wt% of the measured value except where reported in the tables. The PLS regression analysis of the wet washed solids was similar to the PLS regression analysis on the 45 degrees C vacuum-dried sample set. The FTIR-ATR technique allows mid-IR spectra to be obtained in a few minutes from wet washed or dried washed pretreated biomass solids. The prediction of the solids composition of an unknown washed pretreated solid is very rapid once the PLS method has been calibrated with known standard solid residues.

Biomass↗
PubMed2001

Biodegradation of chlorolignin and lignin-like compounds contained in E1-pulp bleaching effluent by fungal treatment.

The ligninolytic system from the fungi Trametes villosa and Panus crinitus can efficiently degrade all fractions of different molecular mass contained in E1-bleaching effluent, but with different degradation rates. The lower-molecular-mass (MM) materials were better characterized when the elution in the size-exclusion high-performance liquid chromatography were monitored at 210 than at 280 nm, which indicates that these compounds may be ring cleavage byproducts from depolymerized chlorolignin. The biodegradation of E1 effluent by both fungi was a multistage process, involving an initial chemical modification of the higher-MM compounds and concomitant oxidation of the lower-MM materials. A subsequent depolymerization of chemically modified polymeric lignin-like compounds also took place. Each stage may require one or several different enzymes. The results suggested that laccase was involved in the initial stage.

Biodegradation, Environmental↗
PubMed2002

Modeling of 2,4-dichlorophenoxyacetic acid controlled-release kinetics from lignin-based formulations.

The second Fick's law of diffusion, considering boundary conditions that at both slab faces the concentration of herbicide is equal to zero (sink conditions), has been adequate to describe our kinetic data obtained from experiments on 2,4 -dichlorophenoxyacetic acid, (2,4 - D) released from lignin-based formulations in a water static bath system. However, the same model proved to be invalid in describing the experimental data obtained with ametryn (2-ethylamino-4-isopropylamino-6-methylthio-1,3,5-triazine) and diuron (3-[3,4-dichlorophenyl]-1,1-dimethylurea) formulations in a water dynamic bath system. For ametryn and diuron formulations, because of the lower aqueous solubility of these herbicides, it was necessary to model a stagnant film at the formulation surface to describe better the release kinetics because the model incorporating sink conditions is insufficient. This study presents a new mathematical modeling of experimental data obtained with 2,4-D formulations in a water static bath system. The new model incorporates a stagnant film as the boundary condition at the formulation surface, and its diffusion coefficient value is more precise than the one estimated by the model employing sink conditions.

2,4-Dichlorophenoxyacetic Acid↗
PubMed2002

Use of steam explosion liquor from sugar cane bagasse for lignin peroxidase production by Phanerochaete chrysosporium.

The possibility of using two by-products of the sugar cane industry, molasses and bagasse steam explosion liquor (SEL), for lignin peroxidase (LiP) production by Phanerochaete chrysosporium was investigated. For comparison, the fungus was initially cultivated in synthetic media containing either glucose, sucrose, xylose, or xylan as sole carbon sources. The effect of veratryl alcohol (VA) was also investigated in relation to the enzyme activity levels. Results showed that sucrose was not metabolized by this fungus, which precluded the use of molasses as a carbon source. Glucose, xylose, and xylan promoted equivalent cell growth. Enzyme levels in the absence of VA were lower than 28 UI/L and in the presence of VA reached 109 IU/L with glucose and 85 IU/L with xylose or xylan. SEL was adequate for P. chrysosporium LiP production as LiP activity reached 90 IU/L. When VA was added to this medium, enzyme concentration increased to 155 IU/L.

Cellulose↗
PubMed2004

Effect of a lignin-degrading fungus on feeding preferences of Formosan subterranean termite (Isoptera: Rhinotermitidae) for different commercial lumber.

The feeding preferences of the Formosan subterranean termite, Coptotermes formosanus Shiraki, for commercial lumber Alaska yellow cedar, Chamaecyparis nootkatensis (D. Don) Spach; yellow birch, Betula alleghaniensis Britton; northern red oak, Quercus rubra L.; redwood, Sequoia sempervirers (D. Don) Endl; and spruce (Picea spp.) were examined to determine whether the presence of the lignin-degrading basidiomycete Marasmiellus troyanus (Murrill) Singer could alter the relative preference of termites for these wood species. In paired choice tests with fungus-inoculated sawdust versus control sawdust, termites showed a strong preference for the fungus-inoculated sawdust for all wood species tested, except for Alaska yellow cedar. In a multiple-choice test using sawdust without fungus, termites showed a very strong preference for red oak sawdust over the other three species. In a paired choice test using fungus-inoculated sawdust, termites showed a preference for redwood over red oak sawdust. In a feeding test using autoclaved wood blocks without fungal decay, there was no difference in termite consumption of birch, red oak, or redwood. The relative preference of termites for redwood increased when blocks were decayed by M. troyanus for 3 and 8 wk. These results indicate that chemical modifications due to fungal decay affected the feeding preference of termites for different commercial lumber.

Animals↗
PubMed1988

Evaluation of internal markers isolated by alkaline hydrogen peroxide incubation and acid detergent lignin extraction.

Samples from two experiments were used to evaluate the potential of ADL and alkaline peroxide lignin (APL; isolated by sequential, alkaline hydrogen peroxide [AHP] incubation and ADL extraction) for predicting digestibility of warm-season grass diets. Experiment 1 evaluated the influence of level of sorghum grain supplementation on utilization of immature bluestem-range grasses, and Exp. 2 evaluated the influence of supplemental protein x energy level interaction on the utilization of dormant bluestem-range grasses. Internal markers isolated in feed, orts and feces were 1) ADL and 2) APL with AHP incubation either before (APL-PRE) or after (APL-POST) the acid detergent extraction step in the ADL procedure. Organic matter digestibility (OMD) was calculated from the ratio of marker consumed to marker excreted for each internal marker and was compared with OMD from total collection. For Exp. 1 a treatment x marker interaction was observed (P less than .01). The APL-PRE procedure yielded OMD coefficients similar (P greater than .10) to total collection values within most treatments, but OMD coefficients from APL-POST and ADL differed (P less than .05) from total collection within all treatments except at the highest level of supplementation. For Exp. 2, predicted OMD values from ALP-PRE were similar (P greater than .10) to total collection values, whereas OMD predictions from APL-POST and ADL were different (P less than .01) from total collection. In conclusion, APL appears promising as an internal marker for bluestem-range grasses if AHP incubation is incorporated before the acid detergent extraction in the ADL procedure.

Animal Feed↗