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PubMed1997

Curie-point pyrolysis mass spectrometry as a tool in clinical microbiology.

Pyrolysis mass spectrometry is a well established analytical tool that has received a considerable boost from the development of low cost, dedicated instruments and sophisticated statistical analyses on personal computers. Further analytical developments, especially in the area of neural networks, are pushing the technology to the forefront of methods for the discrimination and identification of microorganisms and their products. The speed and reproducibility of pyrolysis mass spectrometry and its applicability to a wide range of microorganisms make it an attractive method for epidemiological studies. For inter-strain comparisons, the method is at least as discriminatory as conventional typing systems and usually gives discrimination similar to that of nucleic acid fingerprinting techniques. There has been some success in using neural networks to make identifications across pyrolysis mass spectrometric batches. Further development of methods used to handle data from multiple PyMS analyses can be expected to extend the value of pyrolysis mass spectrometry in clinical microbiology.

Bacteria↗
PubMed1997

Long-term identification of streptomycetes using pyrolysis mass spectrometry and artificial neural networks.

Sixteen reference strains and thirteen fresh isolates of three putatively novel Streptomyces species were examined six times over twenty months using pyrolysis mass spectrometry to examine the long-term reproducibility of the procedure. The reference strains and new isolates were correctly identified using information in each of the datasets and operational fingerprinting, but direct statistical comparison of the datasets for strain identification was unsuccessful between datasets. Artificial neural networks were also used to identify the strains held in the datasets. Neural networks trained with pyrolysis mass spectra from a single dataset were found to successfully identify the reference strains and fresh isolates in that dataset but were unable to identify many of the strains in the other datasets. However, a neural network trained on representative pyrolysis mass spectra from each of the first three datasets were found to identify the reference strains and fresh isolates in those three datasets and in the three subsequent datasets. Therefore, artificial neural network analysis of pyrolysis mass spectrometric data can provide a rapid, cost-effective, accurate and long-term reproducible way of identifying and typing microorganisms.

Humans↗
PubMed2002

Production and characterization of pyrolysis liquids from sunflower-pressed bagasse.

Pyrolysis experiments on sunflower (Helianthus annus L.)-pressed bagasse were performed in a fixed-bed tubular reactor. The effects of nitrogen flow rate and final pyrolysis temperature on the pyrolysis product yields and chemical compositions were investigated. The maximum bio-oil yield of 52.10 wt.% was obtained in a nitrogen atmosphere with flow rate of 50 ml min(-1) and at a pyrolysis temperature of 550 degrees C with a heating rate of 5 degrees C s(-1). The chemical characterization results showed that the oil obtained from sunflower-pressed bagasse may be a potentially valuable source as fuel or chemical feedstocks.

Animals↗
PubMed1999

Laser pyrolysis products-genotoxic, clastogenic and mutagenic effects of the particulate aerosol fractions.

Laser therapy has gained wide acceptance and application in many medical disciplines. Nevertheless, during surgical procedures, the thermal destruction of tissue creates a smoke plume. Recent research data indicate that pyrolysates liberated during vaporisation of tissue induce DNA damage. However, assessing potential health hazards during medical laser treatment requires comprehensive insight into the cytotoxic, genotoxic, clastogenic and mutagenic capacity of laser pyrolysis products (LPP). Therefore, the aim of this study was to evaluate the cytotoxic, genotoxic, clastogenic and mutagenic potential of substances resulting from laser irradiation. Four different types of porcine tissues were irradiated with a surgical CO2 laser, the aerosols were sampled under defined conditions and subjected to the SCE test, micronucleus test and the HPRT test. The results showed that the pyrolysis products are strong inducers of cytotoxic effects. The pyrolysis products induced positive effects in the SCE test, micronucleus test and the HPRT test. The ability and extent to induce genotoxic and mutagenic effects turned out to be dependent on the type of tissue that had been irradiated. In general, the effects were most pronounced with liver pyrolysate. In all test systems, a clear dose relationship could be established. In conclusion, we were able to prove that the particulate fraction of laser pyrolysis aerosols originating from biological tissues undoubtedly have to be classified as cytotoxic, genotoxic, clastogenic and mutagenic. Therefore, they could be potential health hazards for humans.

Adipose Tissue↗
PubMed2002

Use of pyrolysis GC/MS for predicting emission byproducts from the incineration of double-base propellant.

Gas chromatography/mass spectrometry was used to analyze the pyrolytic byproducts from an Army-unique propellant compound (AA2) that is composed of predominantly nitrocellulose and nitroglycerin. Compounds produced by AA2 pyrolysis were compared to compounds detected in the gaseous effluent from AA2 incineration. The light permanent gases and most of the higher molecular weight byproducts produced by AA2 incineration are replicated by laboratory pyrolysis on AA2. The reverse case also holds whereby 18 out of 24 high molecular weight AA2 pyrolytic byproducts are found in the incinerator emissions. Poor matching, however, was obtained between the two processes for the volatile, water-soluble species. None of these low molecular weight compounds produced under pyrolytic conditions were detected in the AA2 incinerator samples, likely indicating inefficient capture of these compounds from the effluent stream. Separate pyrolytic degradation of the individual components of AA2 provides evidence that nearly all of the incomplete combustion products detected during incineration originate not from the prevalent energetic ingredients but rather from the minor and trace additives in AA2. In addition, pyrolysis successfully identified the AA2 components capable of surviving the incineration process intact. This work illustrates the potential of bench-scale pyrolysis for predicting incineration behavior.

Air Pollutants↗
PubMed2005

Relating desorption and biodegradation of phenanthrene to SOM structure characterized by quantitative pyrolysis GC-MS.

A set of four soils was extensively studied for composition, sorption/desorption, and biodegradation to investigate linkages among these three inter-related factors. Composition of soil organic matter (SOM) was quantitatively characterized using pyrolysis GC-MS; although CO2 dominated the total ion chromatogram for all soils, each soil produced a distinctively different pyrogram and 1.4-4.8% of the soil carbon was quantified as one of 205 pyrolysis marker compounds using external standards. Amorphous and free iron and aluminum contents were determined as potential indicators of the reactivity of the mineral phase, which may influence the configuration and accessibility of SOM domains within soil. We observed a statistically significant positive correlation between two-site model fast fraction f values derived from mineralization and desorption rate studies, which suggests that desorption limits biodegradation. However, no statistically significant correlation was observed between two-site model fast and slow rate constants (k(f), k(s)) for the two processes. No evidently strong correlations were found between functional parameters (organic carbon normalized distribution coefficient Koc, hyeteresis index HI, and two-site model parameters f, k(f), and k(S) for both desorption and biodegradation and maximum rate and extent of biodegradation) and SOM structural descriptors (pyrolysis results). Lack of strong correlations may suggest (i) that multiple SOM structures are collectively responsible for desorption resistance or (ii) that the pyrolysis GC-MS method used in this study was unable to identify relevant structures. In contrast, amorphous and free iron and aluminum contents showed statistically significant correlations with K(OC) and HI values, indicating the potential importance of underlying mineral phases in determining desorption and biodegradation rates.

Biodegradation, Environmental↗
PubMed2006

Incorporation, oxidation and pyrolysis of ferrocene into porous silica glass: a route to different silica/carbon and silica/iron oxide nanocomposites.

This work reports the incorporation of ferrocene into a porous silica glass under ambient temperature and atmosphere. After or during the ferrocene incorporation, the spontaneous formation of ferricinium ions was observed by electron paramagnetic resonance (EPR), UV-visible, X-ray absorption near-edge structure (XANES), and 57Fe Mössbauer measurements. It was shown that the oxidation of ferrocene molecules to ferricinium ions was promoted by air and that the Si-O- groups on the surface of the pores act as counteranions. Pyrolysis of the porous glass/ferricinium material under argon atmosphere and variable temperature yields different glass/carbon nanocomposites, which were subsequently treated with an HF solution in order to remove the glassy fraction. The resulting insoluble carbon materials were characterized by transmission electron microscopy (TEM), Raman, and EPR spectroscopy and consisted of amorphous carbon when the pyrolysis was carried out at 900 or 1000 degrees C and of a mixture of carbon nanotubes and carbonaceous materials at a pyrolysis temperature of 1100 degrees C. When the pyrolysis was conducted under air, the incorporated ferricinium forms alpha-Fe2O3, and the resulting material is a transparent and highly homogeneous glass/iron oxide nanocomposite.

Journal Article↗
PubMed2001

Characterization of sago palm (Metroxylon sagu) lignin by analytical pyrolysis.

Dioxane lignin prepared from sago palm (Metroxylon sagu) was characterized by analytical pyrolysis coupled to gas chromatography-mass spectrometry. Large abundances of the p-hydroxybenzoates ester-linked to the lignin were proven by analytical pyrolysis as well as by mild alkaline treatment that produced p-hydroxybenzoic acid in 16.3% yield. Pyrolysis in the presence of tetramethylammonium hydroxide (TMAH) before and after alkaline treatment also showed the presence of ester- and ether-linked p-hydroxybenzoates. Quantitative results of pyrolysis showed that the sago palm lignin is of syringyl type. The relative abundances of TMAH/pyrolysis products derived from the syringyl beta-aryl ether substructures were 4.9 times those of the guaiacyl equivalents. Proton nuclear magnetic resonance analysis also showed the presence of the p-hydroxybenzoates and the predominance of the syringyl moiety over the guaiacyl ones in the sago palm lignin.

Gas Chromatography-Mass Spectrometry↗
PubMed2002

Pyrolysis of lignin in the presence of tetramethylammonium hydroxide: a convenient method for S/G ratio determination.

Pyrolysis-gas chromatography in the presence of tetramethylammonium hydroxide (TMAH) was applied to the determination of the ratio of the abundances of the syringyl beta-aryl ether subunits to those of the guaiacyl equivalents (S/G) in lignin. Diazomethane-methylated kenafs (Hibiscus cannabinus and Hibiscus sabdariffa) and beech (Fagus crenata) in situ lignins were employed. Relative abundances of pyrolysis products derived from the guaiacyl and syringyl beta-aryl ether subunits were determined. The S/G ratios for in situ lignins were obtained with average 3.1% relative standard deviation for a minimum of six repeated runs. The S/G ratios determined by pyrolysis in the presence of TMAH agreed well with those determined by thioacidolysis, with a significant linear regression (R(2) = 0.9867). The results showed that pyrolysis with TMAH is an effective tool for obtaining information on the S/G ratio for in situ lignins.

Biomass↗
PubMed2005

Mechanistic studies of the pyrolysis of 1,3-butadiene, 1,3-butadiene-1,1,4,4-d4, 1,2-butadiene, and 2-butyne by supersonic jet/photoionization mass spectrometry.

The thermal decomposition of 1,3-butadiene, 1,3-butadiene-1,1,4,4-d(4), 1,2-butadiene, and 2-butyne at temperatures up to 1520 K was carried out by flash pyrolysis on a approximately 20 mus time scale. The reaction products were isolated by supersonic expansion and detected by single-photon (lambda = 118 nm) vacuum-ultraviolet time-of-flight mass spectrometry (VUV-TOFMS). Direct detection of CH(3) and C(3)H(3), as well as C(3)H(4), C(4)H(4), and C(4)H(5) products, provides insight into the initial steps involved in the complex pyrolysis of these C(4)H(6) species below T = 1500 K. The similar pyrolysis product distributions for the C(4)H(6) isomers on such a short time scale support the previously proposed mechanism of facile isomerization of these species. Isomerization of 1,3-butadiene to 1,2-butadiene and subsequent C-C bond fission of 1,2-butadiene to produce CH(3) and C(3)H(3) (propargyl) are most likely the primary initial radical production channel in the 1,3-butadiene pyrolysis.

Journal Article↗
PubMed2005

A systematically generated, pressure-dependent mechanism for high-conversion ethane pyrolysis. 1. Pathways to the minor products.

The deposition of carbon during hydrocarbon pyrolysis is part of many industrial processes. The rate and nature of deposition depend, in part, on the gas-phase chemistry of the minor pyrolysis products, which serve as deposition precursors. But the specific reaction pathways governing the formation and destruction of these minor gas-phase products are only partially known. We apply an updated version of our automated mechanism generation tool XMG-PDep to the high-conversion, pyrocarbon-depositing ethane pyrolysis system of Glasier and Pacey, to systematically uncover the likely reaction pathways governing the observed minor products acetylene, propylene, 1,3-butadiene, and benzene. Thorough examination by means of sensitivity, equilibrium, and reaction-pathway analyses reveals an extremely complex, intertwined set of reaction pathways controlling these deposition precursors, some of which are not often considered in the wider pyrolysis literature. Large, aggregated sets of disproportionation reactions, for example, appear to play an important role in the formation of benzene. The analyses motivate a companion paper (following paper in this issue) which explores in greater depth the effects of large groups of radical disproportionation reactions, omitted reaction families, and the possibility that pressure changes in the reactor could alter the distribution of the deposition precursors.

Journal Article↗
PubMed2006

High pressure pyrolysis of toluene. 1. Experiments and modeling of toluene decomposition.

The pyrolysis of toluene, the simplest methyl-substituted aromatic molecule, has been studied behind reflected shock waves using a single pulse shock tube. Experiments were performed at nominal high pressures of 27 and 45 bar and spanning a wide temperature range from 1200 to 1900 K. A variety of stable species, ranging from small hydrocarbons to single ring aromatics (principal soot precursors such as phenylacetylene and indene) were sampled from the shock tube and analyzed using standard gas chromatographic techniques. A detailed chemical kinetic model with 262 reactions and 87 species was assembled to simulate the stable species profiles (specifically toluene, benzene and methane) from the current high-pressure pyrolysis data sets and shock tube-atomic resonance absorption spectrometry (ARAS) H atom profiles obtained from prior toluene pyrolysis experiments performed under similar high-temperature conditions and lower pressures from 1.5 to 8 bar. The primary steps in toluene pyrolysis represent the most sensitive and dominant reactions in the model. Consequently, in the absence of unambiguous direct experimental measurements, we have utilized recent high level theoretical estimates of the barrierless association rate coefficients for these primary reactions, C6H5 + CH3 --> C6H5CH3 (1a) and C6H5CH2 + H --> C6H5CH3 (1b) in the detailed chemical kinetic model. The available data sets can be successfully reconciled with revised values for deltaH0f(298K)(C6H5CH2) = 51.5 +/- 1.0 kcal/mol and deltaH0f(298K)(C6H5) = 78.6 +/- 1.0 kcal/mol that translate to primary dissociation rate constants, reverse of 1a and 1b, represented by k(-1a,infinity) = (4.62 x 10(25))T(-2.53)exp[-104.5 x 10(3)/RT] s(-1) and k(-1b,infinity) = (1.524 x 10(16))T(-0.04)exp[-93.5 x 10(3)/RT] s(-1) (R in units of cal/(mol K)). These high-pressure limiting rate constants suggest high-temperature branching ratios for the primary steps that vary from 0.39 to 0.52 over the temperature range 1200-1800 K.

Journal Article↗
PubMed2005

Multivariate statistics of the pyrolysis products of high molecular components in pulping wastewaters to explain their toxicity.

BACKGROUND, AIM AND SCOPE: At present, large-scale paper manufacture involves delignification and bleaching by elemental chlorine free (ECF), or totally chlorine free (TCF) processes. The wastewater is purified by secondary treatment (mechanical, chemical and biological) which removes most of the toxic substances from the discharge. However, we found residual toxicity in the high molecular (> 1000 D) matter (HMWM) of the discharge by test of the RET (reverse electronic transfer) inhibition. This fraction consists mainly of polydispersed lignin (LIG) and carbohydrate (CH) macromolecules. Structural units in these molecules are studied by pyrolysis gas chromatography/mass spectrometry (Pyr-GC/MS). In the present work, our aim was to find out those structural units which could explain the RET toxicity of LIG or CH molecules. We compared statistically RET toxicity values of the HMWM samples from treated wastewaters of pilot pulping experiments and intensity variation of the pyrolysis product gas chromatograms of these samples. This application is a novel study procedure. METHODS: Pyrolysis products (Py-GC/MS results) and inhibition of RET (reverse electronic transport toxicity) as TU50 and TU20 of HMWM (High Molecular Weight Material; Mw > 1000 D) were compared by multivariate statistics. The samples were from laboratory pilot stages of TCF (Totally Chlorine Free) and ECF (Elemental Chlorine Free) manufacture of softwood pulp. Py-GC/MS was done without and with the addition of TMAH (Tetra Methyl Ammonium Hydroxide). The name and structure of each abundant fragment compound was identified from its retention time and mass spectrum compared to authentic reference compounds or literature. Four sets of Toxicity Units (TUs) and GC peak areas of the pyrolysis fragments were obtained. The data were normalized by division with LIG (lignin content of each sample). TU values were dependent and the fragment values independent (explanatory) variables in statistical treatments by SPSS system. Separate analyses of correlations, principal components (PCA) and stepwise multiple linear regression (SMLR) were performed from the four sample sets TCF and ECF with and without TMAH. RESULTS AND DISCUSSION: From the CH fragments, 2-furfural in TCF, and from the LIG fragments, styrene in ECF showed the highest probabilities of originating from source structures of toxicity. Other possible compounds in concern were indicated to be CH fragment 2-methyl-2-cyclopenten-1-one in ECF and LIG fragments 2-methoxy-4-methylphenol, 4,5-dimethoxy-2-methylphenol and 2-methylphenol in TCF.

Alkylating Agents↗
PubMed2005

Pyrolysis of foundry sand resins: a determination of organic products by mass spectrometry.

Pyrolysis-gas chromatography-mass spectrometry (MS) was used to identify the major organic products produced by pyrolysis of three foundry sand resins: (i) Novolac and (ii) phenolic urethane (PU) (both phenol-formaldehyde based resins) and (iii) furan (furfuryl alcohol based resin). These resins are used in the metal casting industry as a "sand binder" for making cores (used to produce cavities in molds) and molds for nonferrous castings. During the casting process, the cores and molds are subjected to intense heat from the molten metal. As a result, the organic resins undergo thermal decomposition and produce a number of complex organic compounds. In this study, the organics were tentatively identified by MS after pyrolysis of the resins at 750 degrees C. The major thermal decomposition products from the Novolac, PU, and furan resins were derivatives of phenol, benzene, and furan, respectively. Compounds identified that are of potential environmental concern were benzene, toluene, phenol, o- and p-xylene, o- and m-cresol, and polycyclic aromatic hydrocarbons. Pyrolysis of the Novolac resin resulted in the generation of the most compounds of environmental concern. Because there is interest in beneficially using foundry molding sands in manufactured soils and other agricultural products, it is necessary that organic thermal decomposition products be identified to ensure environmental protection.

Conservation of Natural Resources↗
PubMed1984

Curie-point pyrolysis mass spectrometry applied to characterization and identification of selected Bacillus species.

The use of pyrolysis mass spectrometry in the characterization and identification of Bacillus species was studied. Fifty-three strains of four closely related groups, Bacillus subtilis, B. pumilus, B. licheniformis and 'B. amyloliquefaciens', were used in a study of both sporulated and nonsporulated cultures. Pyrolysis was carried out using a Pyromass 8-80, a novel pyrolysis mass spectrometer specifically designed for fingerprinting complex samples. The pyrolysis data obtained were analysed using multivariate statistical techniques. All four groups could be differentiated using data from non-sporulated cultures but the data from sporulated cultures did not separate B. subtilis from 'B. amyloliquefaciens' or B. pumilus. In contrast, B. licheniformis was more clearly differentiated from the other three species using these data. Culture maturity affected the mass spectra obtained from non-sporulated cultures.

Bacillus↗
PubMed1994

Rapid identification using pyrolysis mass spectrometry and artificial neural networks of Propionibacterium acnes isolated from dogs.

Curie-point pyrolysis mass spectra were obtained from reference Propionibacterium strains and canine isolates. Artificial neural networks (ANNs) were trained by supervised learning (with the back-propagation algorithm) to recognize these strains from their pyrolysis mass spectra; all the strains isolated from dogs were identified as human wild type P. acnes. This is an important nosological discovery, and demonstrates that the combination of pyrolysis mass spectrometry and ANNs provides an objective, rapid and accurate identification technique. Bacteria isolated from different biopsy specimens from the same dog were found to be separate strains of P. acnes, demonstrating a within-animal variation in microflora. The classification of the canine isolates by Kohonen artificial neural networks (KANNs) was compared with the classical multivariate techniques of canonical variates analysis and hierarchical cluster analysis, and found to give similar results. This is the first demonstration, within microbiology, of KANNs as an unsupervised clustering technique which has the potential to group pyrolysis mass spectra both automatically and relatively objectively.

Animals↗
PubMed1970

Whole microorganisms studied by pyrolysis-gas chromatography-mass spectrometry: significance for extraterrestrial life detection experiments.

Pyrolysis-gas chromatography-mass spectrometric studies of two microorganisms, Micrococcus luteus and Bacillus subtilis var. niger, indicate that the majority of thermal fragments originate from the principal classes of bio-organic matter found in living systems such as protein and carbohydrate. Furthermore, there is a close qualitative similarity between the type of pyrolysis products found in microorganisms and the pyrolysates of other biological materials. Conversely, there is very little correlation between microbial pyrolysates and comparable pyrolysis studies of meteoritic and fossil organic matter. These observations will aid in the interpretation of a soil organic analysis experiment to be performed on the surface of Mars in 1975. The science payload of this landed mission will include a combined pyrolysis-gas chromatography-mass spectrometry instrument as well as several "direct biology experiments" which are designed to search for extraterrestrial life.

Journal Article↗
PubMed1973

Analysis of streptococcal cell wall fractions by Curie-point pyrolysis gas-liquid chromatography.

A streptococcal strain, classified as Z(3)III was differentiated from its mutant strain, Z(3), lacking the type III polysaccharide antigen, by Curie-point pyrolysis gas-liquid chromatography. Differences observed in pyrograms of whole cells or cell envelopes of both strains could be directly related to the pyrolysis pattern of the purified type III antigen. The same results were obtained when streptococcus F III and its mutant were analyzed. Whereas the pyrolysis patterns of the type III antigen extracted from Z(3)III and F III bacteria were identical, marked differences were found in pyrograms of the serologically identical type III antigen isolated from the culture medium. Type III antigen was also easily differentiated from the purified type I, II and IV antigens. From the above findings it was concluded that pyrolysis gas-liquid chromatography can be used as a tool for the quality control and identification of streptococcal cell wall components.

Antigens, Bacterial↗