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Multilevel phenotypic selection on morphological characters in a metapopulation of Silene tatarica.

This study partitions selection in a natural metapopulation of a riparian plant species, Silene tatarica, into individual- and patch-level components by using contextual analysis, in which a patch refers to a spatially distinct stand of individual plants. We estimated selection gradients for two morphological characters (plant height and number of stems), their respective patch means, and plant density with respect to reproductive success in a two-year study. The approach was also extended to partition selection separately within habitats with varying degrees of exposure to river disturbances and herbivory. The selection differentials and gradients for plant height were positive at both individual and patch levels, with selection forces highest in the closed habitat with low exposure to disturbance. This pattern suggests that local groups with taller than average plants are more visible to pollinators than to groups that are shorter than average plants; and, within patches, individuals with short stature are visited less often than taller ones. Selection on the number of stems was in opposition at individual and patch levels. At the individual level the character was selected toward higher values, whereas selection at the patch-level favored smaller mean number of stems. The strength of the latter component was associated with the intensity of herbivory in different habitats, suggesting that the patch-level selection against a large number of stems might be due to high attractiveness of such patches to the main herbivore, reindeer. Consequently, direction and strength of selection in spatially structured populations may depend significantly on fitness effects arising at the group level.

Climate↗

Increase in Internode Length of Phaseolus lunatus L. Caused by Inoculation with a Nitrate Reductase-deficient Strain of Rhizobium sp.

Dramatic differences in the height of lima beans (Phaseolus lunatus L.) treated with two different Rhizobium strains were studied. Lima beans were grown in Perlite in the greenhouse or in a minus-N culture solution in the growth chamber. The plants were inoculated with either Rhizobium sp. (lima bean) strain 127E15, which contains the constitutive nitrate reductase activity, or strain 127E14, which lacks that activity. For up to 3 weeks, no growth differences were observed in the plants inoculated with either strain. Five weeks after inoculation, however, those plants inoculated with strain 127E14 were significantly taller and had a larger number of leaves than those inoculated with strain 127E15. The difference in plant height was the result of increased internode elongation caused by inoculation with Rhizobium sp. 127E14. This response was observed with all lima bean cultivars tested, including Henderson, Fordhook, Allgreen, and Early Thorogreen. The growth difference occurred in plants cultured in the greenhouse or in the growth chamber.No differences were observed in fresh weights of nodules, roots, axes, leaves, or flowers. The number of nodules, pods, or flowers also did not differ. Acetylene reduction rates and total N content were equal in plants inoculated with strains 127E14 or 127E15.Inasmuch as only internode length and leaf number differed between Rhizobium treatments, the response appeared to be hormone-mediated. Application of gibberellic acid to the apex of plants inoculated with strain 127E15 caused an increase in plant height similar to that observed in untreated plants inoculated with strain 127E14. Conversely, the height of plants infected with strain 127E14 was decreased by application of gibberellin synthesis inhibitors to the root system. These data suggest that the increased growth caused by inoculation with strain 127E14 could be the result of increased gibberellin synthesis in lima bean nodules infected with that strain. Whether this response was related to the absence of nitrate reductase activity in strain 127E14 is unknown.

Journal Article↗

Overexpression of a petunia zinc-finger gene alters cytokinin metabolism and plant forms.

Shoot branching and plant height are among the key factors that define the overall architecture of plants. We found that overexpression of a cDNA for a zinc-finger protein of petunia, designated Lateral shoot-Inducing Factor (LIF), in transgenic petunia plants resulted in a dramatic increase in lateral shoots and reduced plant height. LIF overexpression also caused a decrease in the number of cells in the stem, leaf, and flower, accompanied by enlargement of cells. trans-Zeatin was decreased while N6-(Delta2-isopentenyl)adenine was increased in the leaves of LIF-overexpressed petunia. Most of the riboside, ribotide, and glucoside forms were also increased. Expression analysis using a LIF::GUS fusion gene and RT-PCR suggested that LIF is specifically expressed around the bases of axillary buds and weakly in basal part of flowers in wild-type petunia. GFP-LIF-GUS fusion proteins were translocated into the nucleus when transiently expressed in onion epidermal cells. LIF overexpression resulted in enhanced branching also in tobacco and Arabidopsis, indicating the conservation of the response to LIF overexpression among dicotyledonous plants. On the basis of these results we discuss about possible functions of LIF.

Amino Acid Sequence↗

Comparison of phenotypic and molecular distances to predict heterosis and F1 performance in Ethiopian mustard (Brassica carinata A. Braun).

Predicting heterosis and F1 performance from the parental generation could largely enhance the efficiency of breeding hybrid or synthetic cultivars. This study was undertaken to determine the relationship between parental distances estimated from phenotypic traits or molecular markers with heterosis, F1 performance and general combining ability (GCA) in Ethiopian mustard (Brassica carinata). Nine inbred lines representing seven different geographic regions of Ethiopia were crossed in half-diallel. The nine parents along with their 36 F1s were evaluated in a replicated field trail at three locations in Ethiopia. Distances among the parents were calculated from 14 phenotypic traits (Euclidean distance, ED) and 182 random amplified polymorphic DNA (RAPD) markers (Jaccard's distances, JD), and correlated with heterosis, F1 performance and GCA sum of parents (GCAsum). The correlation between phenotypic and molecular distances was low (r=0.34, P< or =0.05). Parents with low molecular distance also had low phenotypic distance, but parents with high molecular distance had either high, intermediate or low phenotypic distance. Phenotypic distance was highly significantly correlated with mid-parent heterosis (r=0.53), F1 performance (r=0.61) and GCA (r=0.79) for seed yield. Phenotypic distance was also positively correlated with (1) heterosis, F1 performance and GCA for plant height and seeds plant(-1), (2) heterosis for number of pods plant(-1), and (3) F1 performance for 1,000 seed weight. Molecular distance was correlated with GCAsum (r=0.36, P< or =0.05) but not significantly with heterosis and F1 performance for seed yield. For each parent a mean distance was calculated by averaging the distances to the eight other parents. Likewise, mean heterosis was estimated by averaging the heterosis obtained when each parent is crossed with the other eight. For seed yield, both mean ED and JD were significantly correlated with GCA (r=0.90, P< or =0.01 for ED and r=0.68, P< or =0.05 for JD) and mean heterosis (r=0.79, P< or =0.05 for ED and r=0.77, P< or =0.05 for JD). In conclusion, parental distances estimated from phenotypic traits better predicted heterosis, F1 performance and GCA than distances estimated from RAPD markers.

Brassica↗

Geographic patterns of herbivory and resource allocation to defense, growth, and reproduction in an invasive biennial, Alliaria petiolata.

We investigated geographic patterns of herbivory and resource allocation to defense, growth, and reproduction in an invasive biennial, Alliaria petiolata, to test the hypothesis that escape from herbivory in invasive species permits enhanced growth and lower production of defensive chemicals. We quantified herbivore damage, concentrations of sinigrin, and growth and reproduction inside and outside herbivore exclusion treatments, in field populations in the native and invasive ranges. As predicted, unmanipulated plants in the native range (Hungary, Europe) experienced greater herbivore damage than plants in the introduced range (Massachusetts and Connecticut, USA), providing evidence for enemy release, particularly in the first year of growth. Nevertheless, European populations had consistently larger individuals than US populations (rosettes were, for example, eightfold larger) and also had greater reproductive output, but US plants produced larger seeds at a given plant height. Moreover, flowering plants showed significant differences in concentrations of sinigrin in the invasive versus native range, although the direction of the difference was variable, suggesting the influence of environmental effects. Overall, we observed less herbivory, but not increased growth or decreased defense in the invasive range. Geographical differences in performance and leaf chemistry appear to be due to variation in the environment, which could have masked evolved differences in allocation.

Animals↗

Incidence of thrips and tomato spotted wilt Tospovirus in fluecured tobacco protected from early season insect pest infestations.

The relative impacts of early season thrips exclusion (cages) and thrips suppression (pesticides) on tomato spotted wilt (family Bunyaviridae, genus Tospovirus, TSW) Tospovirus infection in flue-cured tobacco, Nicotiana tobaccum L., were examined in field trials in 2001-2004. There were fewer TSW symptomatic plants when plants were covered by exclusion cages for 6 wk than when they were uncaged or caged for 2 or 4 wk after transplanting. Plant height, leaves per plant, and total leaf weight per plant were lower in TSW symptomatic plants compared with nonsymptomatic plants for the uncaged plus 2- and 4-wk caged duration treatments but not different when caged 6 wk. Weekly acephate (Orthene) foliar sprays for 2 or 4 wk after transplanting reduced thrips populations for up to 5 wk after transplanting, whereas the 6-wk sprays had lower thrips populations for up to 8 wk. TSW was lower in both the 4- and 6-wk acephate treatments than in the untreated. A tray drench application of imidacloprid (Admire) reduced thrips populations in early season plus lowered the percentage of TSW compared with no tray drench treatment. The tobacco thrips, Frankliniella fusca (Hinds), was the predominate thrips species on tobacco foliage, and 1.9-4.9% tested positive for nonstructural TSW protein. The imidacloprid tray drench treatment and 6-wk acephate foliar sprays had lower densities of the tobacco-adapted form of Myzus persicae (Sulzer). Suppressing early season thrips populations with foliar acephate or imidacloprid tray drench are management option that can effectively reduce the incidence of TSW in flue-cured tobacco plus suppress aphids.

Animals↗

[Mapping and analysis QTL controlling some morphological traits in Chinese cabbage (Brassica campestris L. ssp. pekinensis)].

An AFLP and RAPD genetic map with 352 markers and a RIL (recombinant inbred lines) population from the cross of two cultivated Chinese cabbage lines were employed in mapping and analysis quantitative trait loci (QTL). The number, location, variation explained and additive effect of QTL underlying nine morphological traits were determined by using composite interval mapping method. Fifty putative QTL, including five for plant growth habit, six for plant height, five for plant diameter, seven for leaf length, four for leaf width, six for leaf length/leaf width ratio, seven for petiole length, four for petiole width and six for bolting character, were mapped on 14 linkage groups. There were unequal gene effects and unequal variation explained on the expression of many morphological traits. These results are fundamentals for molecular assisted selection of morphological traits in Chinese cabbage breeding.

Brassica↗

Genetic analyses of agronomic and seed quality traits of synthetic oilseed Brassica napus produced from interspecific hybridization of B. campestris and B. oleracea.

The heritability, the number of segregating genes and the type of gene interaction of nine agronomic traits were analysed based on F2 populations of synthetic oilseed Brassica napus produced from interspecific hybridization of B. campestris and B. oleracea through ovary culture. The nine traits-plant height, stem width, number of branches, length of main raceme, number of pods per plant, number of seeds per pod, length of pod, seed weight per plant and 1000-seed weight-had heritabilities of 0.927, 0.215, 0.172, 0.381, 0.360, 0.972, 0.952, 0.516 and 0.987 respectively, while the mean numbers of controlling genes for these characters were 7.4, 10.4, 9.9, 12.9, 11.5, 21.7, 20.5, 19.8 and 6.4 respectively. According to estimated coefficients of skewness and kurtosis of the traits tested, no significant gene interaction was found for plant height, stem width, number of branches, length of main raceme, number of seeds per pod and 1000-seed weight. Seed yield per plant is an important target for oilseed production. In partial correlation analysis, number of pods per plant, number of seeds per pod and 1000-seed weight were positively correlated with seed yield per plant. On the other hand, length of pod was negatively correlated (r = -0.69) with seed yield per plant. Other agronomic characters had no significant correlation to seed yield per plant. In this experiment, the linear regressions of seed yield per plant and other agronomic traits were also analysed. The linear regression equation was y = 0.074x8 + 1.819x9 + 6.72x12- 60.78 (R2= 0.993), where x8, x9 and x12 represent number of pods per plant, number of seeds per pod and 1000-seed weight respectively. The experiment also showed that erucic acid and oil contents of seeds from F2 plants were lower than those of their maternal parents. However, glucosinolate content was higher than that of the maternal plants. As for protein content, similar results were found in the F2 plants and their maternal parents. It was shown that the four quality traits, i.e. erucic acid, glucosinolate, oil content, and protein content, had heritability values of 0.614, 0.405, 0.153 and 0.680 respectively.

Analysis of Variance↗

A comparison between the record height-to-stem diameter allometries of Pachycaulis and Leptocaulis species.

BACKGROUND AND AIMS: The interspecific allometry of maximum plant height (Hmax) with respect to maximum basal stem diameter (Dmax) has been studied for leptocaulis dicot and conifer tree species. In contrast, virtually nothing is known about the interspecific allometry of pachycaulis species. Here, the interspecific allometries for palms, cacti and cycads are reported and compared with those of leptocaulis dicot and conifer tree species to determine whether pachycauly limits Hmax with respect to Dmax. METHODS: Data for each of a total of 1461 pachycaulis and leptocaulis species were gathered from the primary literature. The scaling exponent and the allometric constant of logHmax vs. logDmax reduced major axis regression curves (and their respective 95 % confidence intervals) were used to compare the four species groups. The stem slenderness ratio (Hmax/Dmax = Rmax) for each species was also computed to compare interspecific trends in trunk shape. KEY RESULTS AND CONCLUSIONS: Each of the four species groups is allometrically unique, i.e. no single 'canonical' maximum plant height to stem diameter allometry exists across all four species groups. Although pachycaulis does not intrinsically limit height, height is nevertheless limited by the size range of basal stem diameter occupied by each species group. Pachycaulis species achieve heights comparable to some leptocaulis species by virtue of very high slenderness ratios attended by an absence or paucity of stem branching. The diversity observed for pachycaulis stem allometries is likely the result of the independent evolutionary origins of this growth habit and the different anatomical strategies used to stiffen stems.

Adaptation, Physiological↗

[Interference of allelopathic rice cultivars on barnyardgrass under different water irrigation and rice plant density].

Pot culture experiments were conducted to examine the effects of water irrigation and rice plant density on the interference of allelopathic rice on barnyardgrass (Echinochloa crus-galli). The results showed that under water irrigations, allelopathic rice cultivars Xiayitiao, Gumei 2 and Zhong 156 significantly reduced the plant height of barnyardgrass than non-allelopathic rice cultivars Xiushui 63 and Chunjiang 11. Barnyardgrass plants grew shorter as rice plant density increased. Allelopathic rice cultivars Jizaoxian and Gumei 2 interfered with barnyardgrass, even at their densities as low as 4 plants per pot, and the interference reduced plant height of barnyardgrass significantly compared with the non-rice control. Allelopathic rice cultivars Xiayitiao, Jizaoxian, PI312777, TN1, Gumei 2 and Zhong 156 at 32 rice plants per pot inhibited the growth of barnyardgrass significantly than Chunjiang 11.

Echinochloa↗

Utilization of composted sugar industry waste (pressmud) to improve properties of sodic soil for rice cultivation.

Sulphitation pressmud (SPM) and its composts were prepared by heap, pit, NADEP and vermicomposting methods and their effects were compared with soil properties and growth, yield and nutrient uptake by rice in a sodic soil under pot conditions. Application of 15 t ha(-1) SPM and its different composts significantly increased the plant height and dry matter accumulation at different intervals, grain and straw yields and N, P and K uptake by the crop over the control. NADEP compost of SPM alone recorded the maximum and significant plant height by 8.5 to 19.3% and plant dry matter by 14.6 to 32.8% over the raw SPM at different intervals. NADEP composts of SPM alone and SPM + rice straw were also found to be superior than raw SPM by recording 34.8 and 27.8% more grain yield respectively. The SPM composts prepared by NADEP and SPM by vermicomposting methods significantly accumulated higher N and K in rice grains and straw, while NADEP compost of SPM and SPM + rice straw recorded more P in grains and straw than raw SPM. Application of SPM and its composts reduced the pH, EC and bulk density of the soil after rice harvesting, though the reductions were not significant in comparison to the control. However, these treatments increased the soil organic C by 33.33 to 69.0%, available N by 41.4 to 74.8%, available P by 47.1 to 97.8%, available K by 11.8 to 59.2% and available S by 10.3 to 90.7% over the control. NADEP composts, in general, were found to be superior than the raw SPM and other composts in residual soil nutrient content after rice crop.

Agriculture↗

Mapping the d1 and d2 dwarfing genes and the purple foliage color locus P in pearl millet.

The d(1) and d(2) dwarfing genes and the P purple foliage color gene were placed on the restriction fragment length polymorphism (RFLP)-based molecular marker linkage map of pearl millet [Pennisetum glaucum (L.) R. Br.] using a mapping population based on a cross of inbred lines IP 18293 (D(1)/D(1), d(2)/d(2), P/P) and Tift 238D1 (d(1)/d(1) D(2)/D(2) p/p). A skeleton genetic linkage map of 562 cM (Haldane function) was constructed using 33 RFLP markers and these three morphological markers. The D(1)/d(1) plant height locus mapped to pearl millet linkage group 1, while the D(2)/d(2) plant height locus and the P/p foliage color locus mapped to pearl millet linkage group 4. Loose genetic linkage was observed between the D(2)/d(2) and P/p loci, with 42% repulsion-phase recombination corresponding to 92 cM (Haldane). This loose linkage of morphological marker loci detected on pearl millet LG4 can likely find use in applied pearl millet breeding programs, as host plant resistances to both downy mildew and rust have previously been identified in this genomic region. Such exploitation of these morphological markers in an applied disease resistance breeding program would require development of appropriate genetic stocks, but the relatively loose genetic linkage between d(2) and P suggests that this should not be difficult.

Chromosome Mapping↗

Cadmium and zinc accumulation in soybean: A threat to food safety?

A greenhouse study was conducted to quantify cadmium and zinc accumulated by soybean (Glycine max (L.) Merr.) when the metals were supplied separately and together. The highest dose of cadmium (100 mg/kg) reduced plant height and dry weight (down to 40% and 34% of control, respectively); the highest dose of zinc (2000 mg/kg) reduced plant height to 55% of control and dry weight to 70% of control. With both metals present, the plants were approximately the same size as those treated with cadmium only. The concentration of cadmium in the roots was unaffected by zinc. In other tissues, the effect of zinc on the accumulation of cadmium depended on the doses provided. At low doses, the addition of zinc reduced the concentration of cadmium in aboveground tissues to 40-50% of that found in plants exposed to cadmium only. However, when applied in high doses, the presence of zinc in cadmium-contaminated soils increased the uptake and accumulation of cadmium in aboveground tissues by up to 42%. In contrast, at high doses, the presence of cadmium in zinc-contaminated soil resulted in approximately 35% lower concentrations of zinc in all tissues. At a lower dose, cadmium had no effect on concentration of zinc in the plant tissues. The effects of high doses of one metal on the uptake of the other metal can be partially explained by the effects of one metal on the bioavailability of the other metal. In soils to which only one metal was added, bioavailable cadmium was 70-80% of the total cadmium, and bioavailable zinc was 50-70% of the total zinc. When both metals were added to the soil, 80-100% of the cadmium and 46-60% of the zinc were bioavailable. Concentrations of both metals were highest in root tissues (10-fold higher for cadmium, and up to 2-fold higher for zinc). Although relatively little cadmium was translocated to pods and seeds, the seeds of all plants (including those from control and zinc-treated plants) had concentrations of cadmium 3-4 times above the limit of 0.2 mg/kg set by the Codex Alimentarius Commission. This was surprising given that cadmium in the soil was only 1 mg/kg well below the maximum allowable amount for agricultural soil. While it is possible that more cadmium was accumulated by plants in this study than that which might occur under agricultural field conditions, these results reinforce the need to monitor concentrations of toxic metals in food crops.

Cadmium↗

Tolerance of mannitol-accumulating transgenic wheat to water stress and salinity.

Previous work with model transgenic plants has demonstrated that cellular accumulation of mannitol can alleviate abiotic stress. Here, we show that ectopic expression of the mtlD gene for the biosynthesis of mannitol in wheat improves tolerance to water stress and salinity. Wheat (Triticum aestivum L. cv Bobwhite) was transformed with the mtlD gene of Escherichia coli. Tolerance to water stress and salinity was evaluated using calli and T(2) plants transformed with (+mtlD) or without (-mtlD) mtlD. Calli were exposed to -1.0 MPa of polyethylene glycol 8,000 or 100 mM NaCl. T(2) plants were stressed by withholding water or by adding 150 mM NaCl to the nutrient medium. Fresh weight of -mtlD calli was reduced by 40% in the presence of polyethylene glycol and 37% under NaCl stress. Growth of +mtlD calli was not affected by stress. In -mtlD plants, fresh weight, dry weight, plant height, and flag leaf length were reduced by 70%, 56%, 40%, and 45% compared with 40%, 8%, 18%, and 29%, respectively, in +mtlD plants. Salt stress reduced shoot fresh weight, dry weight, plant height, and flag leaf length by 77%, 73%, 25%, and 36% in -mtlD plants, respectively, compared with 50%, 30%, 12%, and 20% in +mtlD plants. However, the amount of mannitol accumulated in the callus and mature fifth leaf (1.7-3.7 micromol g(-1) fresh weight in the callus and 0.6-2.0 micromol g(-1) fresh weight in the leaf) was too small to protect against stress through osmotic adjustment. We conclude that the improved growth performance of mannitol-accumulating calli and mature leaves was due to other stress-protective functions of mannitol, although this study cannot rule out possible osmotic effects in growing regions of the plant.

In Vitro Techniques↗

The plant architecture of rice (Oryza sativa).

Plant architecture, a collection of the important agronomic traits that determine grain production in rice, is mainly affected by factors including tillering, plant height and panicle morphology. Recently, significant progress has been made in isolating and collecting of mutants that are defective in rice plant architecture. Although our understanding of the molecular mechanisms that control rice tillering, panicle development and plant height are still limited, new findings have begun to emerge. This review, therefore, summarizes the recent progress in exploring the mechanisms that control rice plant architecture.

Gene Expression Regulation, Developmental↗

[Genetic-statistical characterization of the novel different-height donors of the stem shortness in winter rye].

Three donors for the dominant stem shortness in winter rye were developed. The genetic determination of the difference in a plant height for each donor was revealed. There were additive genes for the stem shortness in the donors Gnom 1 and Gnom 2 and dominant-epistatic ones in the donor Gnom 3. The investigation of genetic correlation between the number of quantitative traits and the plant height was carried out. On the basis of the data obtained, the strategy of using each donor for stem shortness in rye breeding was determined.

Biometry↗

[Competition and allelopathy of rice isogenic lines having similar genetic background but different plant morphology against weed].

Zhefu 802 rice isogenic lines IG1, IG4, IG25 and IG26 have the same genetic background but different plant morphology. This paper studied their competition and allelopathy against barnyardgrass. The results showed that IG1 and IG4 had higher plant height, bigger tiller angle and less root vitality than IG25 and IG26, and provided 15% and 17% control of barnyardgrass plant dry weight, which were significantly higher than IG26. The competition ability of test rice isogenic lines against the weed was positively correlated with their plant height and tiller angle, but negatively correlated with their root vitality. The inhibition rate of the water extract of IG1 leaves on barnyardgrass root length was 77.6%, significantly higher than that of non-allelopathic material Xiushui 63, while the IG4 which has the similar plant morphology with IG1 didn't show any significant allelopathy. It seems that there were no correlations between allelopathy and morphological characters of rice under the same genetic background.

Biomass↗

Construction of a comparative RFLP map of Echinochloa crus-galli toward QTL analysis of flooding tolerance.

To analyze quantitative trait loci (QTLs) affecting flooding tolerance and other physiological and morphological traits in Echinochloa crus-galli, a restriction fragment length polymorphism (RFLP) map was constructed using 55 plants of the F(2) population ( E. crus-galli var. praticola x E. crus-galli var. formosensis). One hundred forty-one loci formed 41 linkage groups. The total map size was 1,468 cM and the average size of linkage groups was 35.8 cM. The average distance between markers was 14.7 cM and the range was 0-37.2 cM. Early comparisons to the genetic maps of other taxa suggest appreciable synteny with buffelgrass ( Pennisetum spp.) and sorghum ( Sorghum spp.). One hundred ninty-one F(2) plants were used to analyze QTLs of flooding tolerance, plant morphology, heading date, number of leaves, and plant height. For flooding tolerance, two QTLs were detected and one was mapped on linkage group 24. Other traits, including plant morphology, heading date, number of leaves, and plant height were highly correlated. Three genomic regions accounted for most of the mapped QTLs, each explaining 2-4 of the significant marker-trait associations. The high observed correlation between the traits appears to result from QTLs with a large contribution to the phenotypic variance at the same or nearby locations.

Chromosome Mapping↗