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PubMed2005

Scientific management of Mediterranean coastal zone: a hybrid ocean forecasting system for oil spill and search and rescue operations.

The oil spill from Prestige tanker showed the importance of scientifically based protocols to minimize the impacts on the environment. In this work, we describe a new forecasting system to predict oil spill trajectories and their potential impacts on the coastal zone. The system is formed of three main interconnected modules that address different capabilities: (1) an operational circulation sub-system that includes nested models at different scales, data collection with near-real time assimilation, new tools for initialization or assimilation based on genetic algorithms and feature-oriented strategic sampling; (2) an oil spill coastal sub-system that allows simulation of the trajectories and fate of spilled oil together with evaluation of coastal zone vulnerability using environmental sensitivity indexes; (3) a risk management sub-system for decision support based on GIS technology. The system is applied to the Mediterranean Sea where surface currents are highly variable in space and time, and interactions between local, sub-basin and basin scale increase the non-linear interactions effects which need to be adequately resolved at each one of the intervening scales. Besides the Mediterranean Sea is a complex reduced scale ocean representing a real scientific and technological challenge for operational oceanography and particularly for oil spill response and search and rescue operations.

Disaster Planning↗
PubMed2003

Coastal seas as a context for science teaching: a lesson from Chesapeake Bay.

Lessons that employ authentic environmental data can enhance the ability of students to understand fundamental science concepts. This differs from traditional "environmental education" in that school curricula need not set aside time for educators to teach only environmental topics. Rather, the "environment" is used to advance student learning in science and technology. The success of this approach depends on programs that encourage scientists to communicate more effectively with teachers at all education levels. The expanding diversity of research and monitoring activities on the world's marine waters constitutes an outstanding potential education resource. Many of these projects involve remote sensing with sophisticated instrumentation and employ Internet technology to compile measurements, interpret data using graphs and satellite imagery, and share the results among scientific colleagues and the general public alike. Unfortunately, these resources, which constitute a much shortened path between research findings and textbook presentation, are seldom interpreted for use by K-12 educators. We have developed an example that uses the Chesapeake Bay as a paradigm to demonstrate how such interpretation can assist educators in teaching important principles in physical oceanography and marine ecology. We present this example using PowerPoint to conduct a virtual tour of selected Internet sources. Our example begins with the conceptual "salt wedge" circulation model of Chesapeake Bay as a partially mixed estuary. Teachers have the opportunity to explore this model using salinity, temperature, and dissolved oxygen data taken from a research vessel platform during summer professional development programs. This source of authentic data, originally obtained by teachers themselves, clearly demonstrates the presence of a picnocline and deep-water anoxia. Our lesson plan proceeds to interpret these data using additional Internet-based resources at increasing scales of time and space. The "salt wedge," picnocline, and anoxia are examined using graphics derived from data taken by researchers using "ScanFish," a towed instrument that samples temperature, salinity, and dissolved oxygen at a resolution of only a few meters vertically and horizontally. The seasonal dynamics of these parameters at a given location are interpreted using biweekly monitoring data obtained as part of the state-federal Chesapeake Bay Program. The influence of annual variations in freshwater input is examined using stream flow data from US. Geological Survey gauging stations. Satellite remote sensing images from the TOPEX/Poseidon project are used to show how El Niño and La Niña events in the mid-Pacific affect the Chesapeake Bay system via rainfall on its watershed. Finally, the life cycle of the blue crab (Callinectes sapidus) is presented to show how an estuarine organism has adapted to this truly unique and dynamic coastal environment.

Animals↗
PubMed2003

99Tc in seawater in the West Spitsbergen Current and adjacent areas.

99Tc levels were measured in seawater samples collected between 2000 and 2002 in the West Spitsbergen Current (WSC) and along the western coast of Svalbard or Spitzbergen and compared with available oceanographic 3-D modelling results for the late 1990s. Additional data from related regions are also presented in order to support the data interpretation. The seawater in the Arctic fjord Kongsfjorden on the western coast of Svalbard is influenced by the WSC, as shown by the 99Tc levels in surface water. By means of the WSC, 99Tc reaches the Eastern Fram Strait, where one branch of the WSC turns west into the East Greenland Current (EGC), and another branch continues northwards into the Arctic Ocean. Surface seawater collected in the central part of the WSC during a cruise on board the R/V "Polarstern" in the summer of 2000, showed higher levels of (99)Tc than samples measured in Kongsfjorden in the spring of 2000. However, all levels measured in surface water are of the same order of magnitude. Data from sampling of deeper water in the WSC and EGC provide information pertaining to the lateral distribution of 99Tc. In all vertical profiling surveys (conducted in spring and summer), the highest levels of 99Tc were found in surface water. Comparison with oceanographic 3-D modelling indicates both significant seasonal variations in the lateral stratification of the WSC and variations with depth over shorter vertical distances. This information can be applied in sampling strategies, environmental monitoring, long-range transport of pollutants and physical oceanography.

Environmental Monitoring↗
PubMed2005

Research initiatives in Mauritius.

Mauritius forms part of the Mascarene Islands of the Indian Ocean and is situated ca. 700 km to the east of Madagascar at latitude 20 degrees S and longitude 57.5 degrees E. Mauritius has jurisdiction over a proclaimed Exclusive Economic Zone that stretches over 1,900,000 km2. This extensive area holds an immense potential for exploration and presents a wide range of scientific and industrial challenges and opportunities. At present, ocean-related activities are undertaken by various governmental and para-statal institutions as well as non-governmental organizations. Mauritius recognizes the need to coordinate all efforts in order to eliminate wasteful duplication and focus on potential for development, and this has seen the establishment of different forums and committees. This paper gives a brief overview of the different institutions involved in marine science and oceanography in Mauritius and lists the major projects that are being undertaken as well as some of the projects or new research initiatives that are in the pipeline.

Conservation of Natural Resources↗
PubMed2004

Strong genetic clines and geographical variation in gene flow in the rocky intertidal barnacle Balanus glandula.

A long-standing issue in marine biology is identifying spatial scales at which populations of sessile adults are connected by planktonic offspring. We examined the genetic continuity of the acorn barnacle Balanus glandula, an abundant member of rocky intertidal communities of the northeastern Pacific Ocean, and compared these genetic patterns to the nearshore oceanography described by trajectories of surface drifters. Consistent with its broad dispersal potential, barnacle populations are genetically similar at both mitochondrial (cytochrome oxidase I) and nuclear (elongation factor 1-alpha) loci across broad swaths of the species' range. In central California, however, there is a striking genetic cline across 475 km of coastline between northern and southern populations. These patterns indicate that gene flow within central California is far more restricted spatially than among other populations. Possible reasons for the steep cline include the slow secondary introgression of historically separated populations, a balance between diversifying selection and dispersal, or some mix of both. Geographic trajectories of oceanic drifters closely parallel geographical patterns of gene flow. Drifters placed to the north (Oregon; approximately 44 degrees N) and south (Santa Barbara, California; approximately 34 degrees N) of the cline disperse hundreds of kilometers within 40 days, yet over the long-term their trajectories never overlapped. The lack of communication between waters originating in Oregon and southern California probably helps to maintain strong genetic differentiation between these regions. More broadly, the geographical variation in gene flow implies that focusing on species-level averages of gene flow can mask biologically important variance within species which reflects local environmental conditions and historical events.

Animals↗
PubMed2004

Phylogeography of a high-dispersal New Zealand sea-star: does upwelling block gene-flow?

New Zealand's (NZ) geographical isolation, extensive coastline and well-characterized oceanography offer a valuable system for marine biogeographical research. Here we use mtDNA control region sequences in the abundant endemic sea-star Patiriella regularis to test the following literature-based predictions: that coastal upwelling disrupts north-south gene flow and promotes population differentiation (hypothesis 1); and that an invasive Tasmanian population of the species was introduced anthropogenically from southern New Zealand (hypothesis 2). We sequenced 114 samples from 22 geographical locations, including nine sites from North Island, nine from South Island, one from Stewart Island and three from Tasmania. Our analysis of these sequences revealed an abundance of shallow phylogenetic lineages within P. regularis (68 haplotypes, mean divergence 0.9%). We detected significant genetic heterogeneity between pooled samples from northern vs. southern New Zealand (FST = 0.072; P = 0.0002), consistent with the hypothesis that upwelling disrupts gene flow between these regions (hypothesis 1). However, we are currently unable to rule out the alternative hypothesis that Cook Strait represents a barrier to dispersal (North Island vs. South Island; FST = 0.031; P = 0.0467). The detection of significant spatial structure in NZ samples is consistent with restricted gene flow, and the strong structure evident in northern NZ may be facilitated by distinct ocean current systems. Four shared haplotypes and nonsignificant differentiation (FST = 0.025; P = 0.2525) between southern New Zealand and Tasmanian samples is consistent with an anthropogenic origin for the latter population (hypothesis 2).

Animals↗
PubMed1967

Manned submersibles for research. These immature but developing tools open another door for examining history and current processes.

The past decade has seen the development of small submersibles as a new and effective tool of geology, acoustics, marine biology, and physical oceanography. As with all tools, it has special capabilities and limitations. The methods of use and the needed engineering improvements are being identified. Scientists, engineers, government, and industry are responding so that advances toward both less-expensive simple vehicles and high-performance complex vehicles are proceeding.

Ecological Systems, Closed↗
PubMed2006

Application of fast repetition rate fluorometry to phytoplankton photosynthetic parameters in freshwaters.

Fast repetition rate fluorometry (FRRF) was successfully applied to various studies in modern oceanography. In this study, for the first time, the seasonality of phytoplankton photosynthetic parameters in a deep alpine lake was observed using FRRF in combination with the traditional (14)C incubation technique. Special attention was given to the differences in photosynthetic behaviour during mixed and stratified conditions, characterised especially during summer by a deep chlorophyll maximum (DCM) dominated by the filamentous cyanobacterial species Planktothrix rubescens. Maximum light-utilisation efficiency (alpha*(14C)) was in the range of 0.01-0.03 mgC (mg Chl-a)(-1) h(-1 )(mumol phot. m(-2) s(-1))(-1), while maximum quantum yields for carbon fixation (Phi(C,max)) varied from 0.01-0.07 molC (mol phot.)(-1). Higher values occurred during thermal stratification indicating acclimation of the phytoplankton assemblage. These findings were supported by FRRF-based estimates, although cyanobacterial blooms could not be characterised by FRRF-excitation due to methodological deficiencies. In general, however, instantaneous photosynthetic rates measured by FRRF-excitation correlate well at sub-saturating light-intensities with conventional (14)C-uptake rates, although they operate on different time-scales.

Fluorometry↗
PubMed1994

Monitoring biological effects of contamination in marine fish along French coasts by measurement of ethoxyresorufin-O-deethylase activity.

The use of bioindicators to evaluate exposure to the biological effects of chemical pollutants in marine organisms constitutes a new tool in the monitoring field. The establishment of a North Sea monitoring network in 1991, involving such international organizations as the North Sea Task Force, the International Council for the Exploration of the Sea, and the Intergovernmental Oceanography Commission, led French researchers to develop an enzymatic biomarker to monitor biological effects within the National Observation Network. The biomarker, ethoxyresorufin-O-deethylase (EROD), dependent on the CP450 system, has been monitored biannually since 1992 in several species of fish (Callionymus lyra, Limanda limanda, Serranus sp., Mullus barbatus) in two coastal sites particularly exposed to industrial and domestic pollution. A rapid method is used to assay EROD enzymatic activity determined along a pollution gradient, and results are interpreted on a microplate reader. The strategy of this approach is to assess the effects on the marine ecosystem during prolonged exposure to specific pollutants such as polyaromatic hydrocarbons, polychlorinated biphenyls, and dioxins.

Animals↗
PubMed2006

Modelling surface radioactive spill dispersion in the Alborán Sea.

The Strait of Gibraltar and the Alborán Sea are the only connection between the Atlantic Ocean and the Mediterranean Sea. Intense shipping activities occur in the area, including transport of waste radionuclides and transit of nuclear submarines. Thus, it is relevant to have a dispersion model that can be used in an emergency situation after an accident, to help the decision-making process. Such dispersion model requires an appropriate description of the physical oceanography of the region of interest, with simulations of tides and residual (average) circulation. In this work, a particle-tracking dispersion model that can be used to simulate the dispersion of radionuclides in the system Strait of Gibraltar-Alborán Sea is described. Tides are simulated using a barotropic model and for the average circulation a reduced-gravity model is applied. This model is able to reproduce the main features of the Alborán circulation (the well known Western Alborán Gyre, WAG, and the coastal circulation mode). The dispersion model is run off-line, using previously computed tidal and residual currents. The contamination patch is simulated by a number of particles whose individual paths are computed; diffusion and decay being modelled using a Monte Carlo method. Radionuclide concentrations may be obtained from the density of particles per water volume unit. Results from the hydrodynamic models have been compared with observations in the area. Several examples of dispersion computations under different wind and circulation conditions are presented.

Seawater↗
PubMed2005

Improvement of pollutant drift forecast system applied to the Prestige oil spills in Galicia Coast (NW of Spain): development of an operational system.

An integrated system named METEOMOHID, developed by MeteoGalicia in the first stage of the Prestige accident in November 2002 was used successfully in an operational form to support decision making and assist in recovering tasks. Afterwards, METEOMOHID has been enhanced with the aim of developing an operational oceanography system to be used in the NW of the Iberian Peninsula. The METEOMOHID system includes local area hydrodynamic coastal ocean modelling (MOHID), real time atmospheric forcing from a local meteorological model (ARPS). Using the available data from the Prestige crisis, a set of simulations were designed in order to reproduce the oil spill drift. The implementation of a detailed vertical resolution in the model has allowed obtaining a detailed surface dynamic, improving our knowledge of the behaviour of tarballs into the water column. Thus, the wind-driven Eckman drift, the direct dragging of the wind were detached, and the possible existence of subsurface oil was assessed. In addition, the present work evaluates the effects of introducing climatologic large scale currents in the METEOMOHID system.

Atlantic Ocean↗
PubMed2006

Effects of nitrogen and sulphide on macroinfaunal community: a microcosm study.

A microcosm experiment was conducted to test the short-term effects of nitrogen (as TKN, total Kjeldahl nitrogen) and sulphide (as AVS, acid volatile sulphide) on macrobenthic infauna over a period of 8 weeks. The experiment consisted of four treatments using sediment cores (D: 8 cm, H: 20 cm) with addition of: I, nitrogen (N) to an in situ mean level of 0.48 mg Ng(-1) dw; II, sulphidic solution (S) to an in situ mean level of 318.8 microM S g(-1) dw; III, nitrogen and sulphidic solution (NS) to in situ mean levels of 0.45 mg Ng(-1) dw and 329.0 microM S g(-1) dw, respectively, and IV, control with no addition of N and S. Sediment cores were retrieved for analysis of infaunal composition after weeks 2, 4 and 8. A total of 646 specimens of macrobenthic infauna belonging to 27 species were recorded from the cores, in which polychaetes were the most abundant with respect to species and individual numbers. Mean species number and diversity H' of the control and N treatment was statistically higher than S and NS treatments, mean individual number of the S treatment was larger than the NS treatment, and mean evenness J of the S treatment was lower than the N and NS treatments as well as the control. Individual numbers also showed a significant increase from weeks 2 to 8, whereas evenness J decreased in weeks 4 and 8. Multivariate analyses of the faunal data suggested that benthic composition of the N treatment and control did not differ during the experimental period, but changes in benthic structure in S and NS treatments were evident. The present findings demonstrated the dose-response relationship of benthic species changes under controlled addition of N and S. The response to N and S additions in the sediment microcosms was in agreement with the general effects of organic enrichment on macrobenthic communities along a spatial gradient of organic pollution as described by Pearson and Rosenberg [Pearson, T.H., Rosenberg, R., 1978. Macrobenthic succession in relation to organic enrichment and pollution of the marine environment. Oceanography and Marine Biology Annual Review 16, 229-311]. However, in the present experiment, community changes in the treatments were observable in a short, temporal scale.

Analysis of Variance↗
PubMed2006

Historical population dynamics and demography of the Eastern Atlantic pomacentrid Chromis limbata (Valenciennes, 1833).

Recent studies have focused on the relationship between the marine fauna of the Eastern Atlantic and the Mediterranean Sea, but within the Atlantic, little is known about genetic relationships between populations of the Macaronesian islands. In this study, we tested whether the paleo-climatology and paleo-oceanography of the region could predict the genetic relationships among three Eastern Atlantic populations (Azores, Madeira, and Canaries) of a damselfish, Chromis limbata, and compared our results with its Mediterranean and adjacent Atlantic sister species, Chromis chromis. We combined phylogeographic and coalescent approaches using the fast evolving mitochondrial control region gene. No population structure was found for the three archipelagos. The coalescence time estimated for C. limbata (0.857-1.17 Mya) was much greater than that estimated for C. chromis. We propose that this difference reflects differences in glaciating extents in the Northeastern Atlantic and the Mediterranean. Diversity indexes (Hd and genetic distances) together with historical demographic parameters of C. limbata (Theta and g) revealed a more stable population history when compared to C. chromis. Our results suggest that the Macaronesian populations of C. limbata have probably been less affected by the last glaciation than the Mediterranean populations of C. chromis. Migration across the three archipelagos was estimated and a prevailing northwest trend was detected. This result supports the idea of a colonization of the Azores by warm water fish from Madeira or the westernmost Canary islands which acted as major glacial refugia for the tropical and subtropical marine fauna during the glaciations.

Animals↗
PubMed2001

Microorganisms' activity and energy fluxes in Lake Varese (Italy): a field method.

Microorganisms are fundamental components of energy fluxes in aquatic ecosystems. Interest in plankton production and respiration has recently stimulated exploration of the use of electron transfer system (ETS) activity in oceanography and limnology. If we consider microorganism production (MP) and microorganism respiration (MR), due to aerobic and anaerobic metabolism, microorganism growth efficiency can be defined as MGE = MP/(MP + MR). In order to calculate MGE, we measured independently the two components of ETS (photosynthesis electron transfer system activity (PETS) and respiration electron transfer system activity (RETS)) during an annual cycle using a portable biosensor microorganisms amperometric detector system (MiDAS) on the site. MGE was calculated in samples collected from the photic and aphotic zones and the superficial sediment and ranged between 0.60 and 0.45 and dropped to 0.15 at the end of the summer. This substantial decrease is probably due to the prevalence of the anaerobic-heterotrophic metabolism after a pronounced state of anoxia during the summer algal bloom.

Aerobiosis↗
PubMed1998

Recolonization and succession of marine macrobenthos in organic-enriched sediment deposited from fish farms.

High organic loading deposited on the sea bottom by marine fish farming activities often eliminates benthic organisms in the vicinity. In this study, organic-enriched sediment collected underneath a fish farm was defaunated, placed in settling trays and exposed to the subtidal area of a clean site of similar hydrography. Trays were sampled monthly for a consecutive period of 5 months, and recolonization and successional patterns of macrobenthos were studied using univariate and multivariate statistics. Recolonization occurred rapidly, and averages of 144 animals/tray and 26 species/tray were recorded within the first month. Molluscs accounted for 49% of species and polychaetes for 77% of abundance during the first month of recolonization. Temporal changes in abundance, diversity and species composition found in subsequent months resembled spatial changes of benthic community along a decreasing pollution gradient generalised by Pearson and Rosenberg (1978, Oceanography & Marine Biology Annual Review 16, 229-311). Abundance reached a peak after 3 months (434 animals/tray) and then declined. Species number also increased, peaked after 4 months (47 species/tray), and was followed by a decrease. The polychaete Prionospio malmgreni succeeded Pseudopolydora paucibranchiata as the dominant species after the first month, reached a peak (194 animals/tray) after 3 months, then declined sharply. The rapid recolonization and succession of the macrobenthic community on organic-enriched sediment suggested that present fish farming methods are unlikely to have a long-term impact on benthic communities once farming activities are reduced/ceased.

Journal Article↗
PubMed1999

A review of low-level tritium systems and sensitivity requirements.

Data from three international intercomparison projects are used to study the state of the tritium low-level technique and to set a realistic sensitivity level that should be demanded in ultralow-level tritium work, mainly in hydrology and oceanography. Only two laboratories reach the required goal, a standard deviation < or = 0.03 TU for weak samples. The methods used are described and important parameters illustrated graphically. Possible improvements in the measuring techniques are discussed, including the design of better counting systems.

Electrolysis↗
PubMedDate not supplied

Seabirds as indicators of changes in marine ecosystems: ecological monitoring on Machias Seal Island.

Changes in marine ecosystems can be manifested in many different ways, on different temporal and spatial scales. Seabirds are top consumers in marine foodwebs and offer opportunities to detect and assess the biological effects of changes in physical parameters (sea-surface temperature [SST], salinity, depth of thermocline etc.) of the marine ecosystem. We compare six-eight years' of data on the biology (diet, and breeding success) of four species of seabird (arctic tern Sterna paradisaea and common tern S. hirundo, which feed at the sea surface; and Atlantic puffin Fratercula antica and razorbill Alca torda, which dive 30-60 m for their prey) breeding on Machias Seal Island (MSI) in the Bay of Fundy with both our own meteorological and oceanographic measurements, and with standard measurements from conventional sources. These are compared with fisheries data on changes in the main prey of all the seabirds concerned (juvenile or '0-group' herring Clupea harengus) which are the most direct link between the seabirds and the physical properties of the marine system. We explore relationships between seabird productivity and diet, and other aspects of both herring biology (larval surveys, and fat content) and oceanography (SST data from the island, and remotely sensed data from the entrance to the Bay of Fundy). Timing of laying by puffins followed SST variation at neither the local (MSI) nor regional scales, but at the scale of the North Atlantic, following the trend of populations breeding off northern Norway. The proportion of herring in the diet of terns over 6 years varied inversely with herring larval abundance the previous fall; this relationship was not statistically significant in the puffin and razorbill. A major new finding is the considerable (approximately 50%) inter-annual variation in the energy density (fat content) of juvenile herring that are the main seabird prey; breeding success of both species of tern varied in parallel with the energy density of juvenile herring in the diet until the last two years of the study, when sandlance (Ammodytes sp.) and euphausid shrimp predominated in the diet. Our long-term research approach combines traditional population monitoring (of numbers of breeding birds) with demographic, behavioural and environmental monitoring, to provide new understanding of the marine ecosystem as well as of seabirds.

Animals↗
PubMed2000

Ocean circulation off east Antarctica affects ecosystem structure and sea-ice extent.

Sea ice and oceanic boundaries have a dominant effect in structuring Antarctic marine ecosystems. Satellite imagery and historical data have identified the southern boundary of the Antarctic Circumpolar Current as a site of enhanced biological productivity. Meso-scale surveys off the Antarctic peninsula have related the abundances of Antarctic krill (Euphausia superba) and salps (Salpa thompsoni) to inter-annual variations in sea-ice extent. Here we have examined the ecosystem structure and oceanography spanning 3,500 km of the east Antarctic coastline, linking the scales of local surveys and global observations. Between 80 degrees and 150 degrees E there is a threefold variation in the extent of annual sea-ice cover, enabling us to examine the regional effects of sea ice and ocean circulation on biological productivity. Phytoplankton, primary productivity, Antarctic krill, whales and seabirds were concentrated where winter sea-ice extent is maximal, whereas salps were located where the sea-ice extent is minimal. We found enhanced biological activity south of the southern boundary of the Antarctic Circumpolar Current rather than in association with it. We propose that along this coastline ocean circulation determines both the sea-ice conditions and the level of biological productivity at all trophic levels.

Animals↗