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PubMed2005

Character displacement as the "best of a bad situation": fitness trade-offs resulting from selection to minimize resource and mate competition.

Character displacement has long been considered a major cause of adaptive diversification. When species compete for resources or mates, character displacement minimizes competition by promoting divergence in phenotypes associated with resource use (ecological character displacement) or mate attraction (reproductive character displacement). In this study, we investigated whether character displacement can also have pleiotropic effects that lead to fitness trade-offs between the benefits of avoiding competition and costs accrued in other fitness components. We show that both reproductive and ecological character displacement have caused spadefoot toads to evolve smaller body size in the presence of a heterospecific competitor. Although this shift in size likely arose as a by-product of character displacement acting to promote divergence between species in mating behavior and larval development, it concomitantly reduces offspring survival, female fecundity, and sexual selection on males. Thus, character displacement may represent the "best of a bad situation" in that it lessens competition, but at a cost. Individuals in sympatry with the displaced phenotype will have higher fitness than those without the displaced trait because they experience reduced competition, but they may have reduced fitness relative to individuals in allopatry. Such a fitness trade-off can limit the conditions under which character displacement evolves and may even increase the risk of "Darwinian extinction" in sympatric populations. Consequently, character displacement may not always promote diversification in the manner that is often expected.

Animals↗
PubMed2002

Ephemeroptera egg chorion characters: a test of their importance in assessing phylogenetic relationships.

The egg chorion ultrastructures of the Hermanella-Traverella (Insecta: Ephemeroptera) species complex were studied from a comparative point of view and used for the first time in a cladistic analysis. Egg characters, along with other nymphal and adult morphological characters, were used to assess the phylogenetic relationships of the species complex. In order to test the value of egg characters, analyses were performed on three matrices: 1) egg characters alone, 2) adult and nymphal characters, and 3) adult, nymphal, and egg characters. The computer program Pee-Wee was used to carry out the analysis. The cladistic analysis confirmed the value and potential of egg chorionic characters in assessing the phylogenetic relationships among ephemeropteran species. Egg characters, when added to the nymphal and adult character matrix, provided extra support to the monophyletic nature of the Hermanella-Traverella complex. Previously weakly defined clades were also resolved based on the new evidence. In the species studied the egg chorionic structures as well as their shape did not change after oviposition or water immersion, remaining constant through the different maturation stages of each species (mature nymph, subimago, and imago). For this reason, the eggs are a valuable source of information to unambiguously identify and associate a nymph to its correspondent adult stage when rearing is not possible.

Animals↗
PubMed2006

Application of the character compatibility approach to generalized molecular sequence data: branching order of the proteobacterial subdivisions.

The character compatibility approach, which removes all homoplasic characters and involves finding the largest clique of compatible characters in a dataset, in principle, provides a powerful means for obtaining correct topology in difficult to resolve cases. However, the usefulness of this approach to generalized molecular sequence data for phylogeny determination has not been studied in the past. We have used this approach to determine the topology of 23 proteobacterial species (6 each of alpha-, beta- and gamma-, 3 delta-, and 2 epsilon-proteobacteria) using sequence data for 10 conserved proteins (Hsp60, Hsp70, EF-Tu, EF-G, alanyl-tRNA synthetase, RecA, GyrA, GyrB, RpoB and RpoC). All sites in the sequence alignments of these proteins where only two amino acids were found, with each amino acid present in at least two species, were selected. Mutual compatibility determination on these binary state sites was carried out by two means. In one case, all of these sites were combined into a large dataset (Set A; 957 characters) prior to compatibility analysis. In the second case, compatibility analysis was carried out on characters from individual proteins and all compatible sites were combined into a large dataset (Set B; 398 characters) for further studies. Upon compatibility analyses, the largest cliques that were obtained from Sets A and B consisted of 337 and 323 compatible characters, respectively. In these cliques, all proteobacterial subgroups were clearly distinguished and branching orders of most of the species were also resolved. The epsilon-proteobacteria exhibited the earliest branching, whereas the beta- and gamma-subgroups were found to have emerged last. The relative placement of the alpha- and delta-subgroups, however, was not resolved. The topology of these species was also determined based on 16S rRNA sequences and a concatenated dataset of sequences for all 10 proteins by means of neighbor-joining, maximum likelihood, and maximum parsimony methods. In the protein trees, all proteobacterial groups were reliably resolved and they branched in the following order: (epsilon(delta(alpha(beta,gamma)))). However, in the rRNA trees, the gamma- and beta-subgroups exhibited polyphyletic branching and many internal nodes were not resolved. These results indicate that the character compatibility analysis using generalized molecular sequence data provides a powerful means for evolutionary studies. Based on molecular sequences, it should be possible to obtain very large datasets of compatible characters that should prove very helpful in clarifying difficult to resolve phylogenetic relationships.

Amino Acid Sequence↗
PubMed1976

Familiarity of background characters in visual scanning.

It is much easier to look for an unfamiliar character (upsidedown A) embedded among familiar ones than to look for a familiar character (A) among unfamiliar ones. Furthermore, the nature of the background seems more important to performance than the nature of the target. The basic experiments involved showing subjects a matrix with nine characters. On target-present trials, eight of the characters were background items and one character was a target item. On target-absent trials, all nine matrix positions were filled by background characters. The types of unfamiliar characters used were rotated English letters, partial letters, and Gibson figures. The familiar characters were upright English letters or digits. Search was easier through familiar backgrounds than through unfamiliar backgrounds with all of the character types used and whether measuring speed or accuracy.

Attention↗
PubMed2004

Selection on floral characters in natural Spanish populations of Silene latifolia.

In insect-pollinated plants, floral characters are expected to play an important role in paternal and maternal reproductive success. Bateman's principle states that male reproductive success increases with more mating opportunities, while female reproductive success is limited by the amount of resources available to produce progeny, thus there should be greater selection on male floral characters than on female. In the case of the dioecious plant Silene latifolia, floral characters are likely to be influenced by its association within its native European range with moths of the genus Hadena, which serve as both pollinators and seed predators. The present study addresses relationships between male and female reproductive success, spatial location and floral characters (corolla, calyx and claw) over a 2-year period in two Spanish populations of S. latifolia in the presence of Hadena moths. A maximum likelihood paternity analysis using genetic variation at six allozyme markers showed heterogeneity in male reproductive success. There was much less variation in female reproductive success. When this analysis was extended to include interplant distance as a causal factor underlying variation in male success, we found that successful pollination tended to be limited to nearby females, in accordance with exponential decay of pollen dispersal with increasing distance. When the paternity analysis included floral characters as a causal factor underlying variation in male success, our data showed little evidence for directional selection, but there was stabilizing selection in one of the two years for calyx diameter. Selection on female characters varied widely between sites and years, in most of the site/year combinations there was little selection on female floral characters; however, in one site/year there was evidence for selection on all three floral characters. We conclude that pollinators visit flowers that are close together, and that while floral characters are important for the attraction of pollinators, larger flowers do not necessarily attract more pollinators at all sites and that variation among sites and years makes difficult any conclusions about the long-term importance of the predictions suggested by Bateman's principle.

Animals↗
PubMed2004

A method for estimating the relative importance of characters in cladistic analyses.

The method of character importance ranking (CIR) is proposed here as a means for estimating the relative "importance" of characters in cladistic analyses, especially those based on morphological features. CIR uses the weighting variable to incrementally remove one character at a time from the analysis, and then evaluates the impact of the removal on the shape of the cladogram. The greater the impact, the more important the character. The CIR method for determining which characters drive the shape of a particular cladogram has several applications. It identifies the characters with the strongest (though not necessarily most accurate) signal in a cladistic analysis; it permits the informed prioritization of characters for further investigation via genetic, developmental, and functional approaches; and it highlights characters whose definition, scoring, independence, and variation should be reviewed with particular care. The application of CIR reveals that at least some cladograms depend entirely on a single character.

Animals↗
PubMed2005

Character complexity and redundancy in writing systems over human history.

A writing system is a visual notation system wherein a repertoire of marks, or strokes, is used to build a repertoire of characters. Are there any commonalities across writing systems concerning the rules governing how strokes combine into characters; commonalities that might help us identify selection pressures on the development of written language? In an effort to answer this question we examined how strokes combine to make characters in more than 100 writing systems over human history, ranging from about 10 to 200 characters,and including numerals, abjads, abugidas, alphabets and syllabaries from five major taxa: Ancient Near-Eastern, European, Middle Eastern, South Asian, Southeast Asian. We discovered underlying similarities in two fundamental respects. (i) The number of strokes per characters is approximately three, independent of the number of characters in the writing system; numeral systems are the exception, having on average only two strokes per character. (ii) Characters are ca. 50% redundant, independent of writing system size; intuitively, this means that acharacter's identity can be determined even when half of its strokes are removed. Because writing systems are under selective pressure to have characters that are easy for the visual system to recognize and for the motor system to write, these fundamental commonalities may be a fingerprint of mechanisms underlying the visuo-motor system.

Form Perception↗
PubMed2000

Exhaustion of morphologic character states among fossil taxa.

Frequencies of new character state derivations are analyzed for 56 fossil taxa. The hypothesis that new character states are added continuously throughout clade history can be rejected for 48 of these clades. Two alternative explanations are considered: finite states and ordered states. The former hypothesizes a limited number of states available to each character and is tested using rarefaction equations. The latter hypothesizes that there are limited possible descendant morphologies for any state, even if the character has infinite potential states. This is tested using power functions. The finite states hypothesis explains states: steps relationships significantly better than does the ordered states hypothesis in 14 cases; the converse is true for 14 other cases. Under either hypothesis, trilobite clades show appreciably more homoplasty after the same numbers of steps than do molluscs, echinoderms, or vertebrates. The prevalence of the exhaustion pattern among different taxonomic groups implies that worker biases are not to blame and instead implicates biological explanations such as intrinsic constraints or persistent selective trends. Regardless of the source of increased homoplasy, clades appear to exhaust their available character spaces. Nearly all examined taxa show significant increases in proportions of incompatible character pairs (i.e., those necessarily implying homoplasy) as progressively younger taxa are added to character matrices. Thus, a deterioration of hierarchical structure accompanies character state exhaustion. Exhaustion has several implications: (1) the basic premise of cladistic analyses (i.e., that maximum congruence reflects homology rather than homoplasy) becomes increasingly less sound as clades age; (2) sampling high proportions of taxa probably is needed for congruence to discern homoplasy from homology; (3) stratigraphic data might be necessary to discern congruent homoplasy from congruent homology; and (4) in many cases, character states appear to have evolved in ordered patterns.

Fossils↗
PubMed2005

Effects of numbers of strokes on Chinese character recognition during a normal reading condition.

Two experiments investigated recognition during a normal reading condition of Chinese characters which had varied numbers of strokes. In Exp. 1 the minimal legible character size necessary for attaining 95% recognition accuracy for various Chinese characters was empirically determined. The number of strokes comprising the characters ranged from 3 to 27. The results of a normal reading condition indicated that characters with more strokes had to be larger. In Exp. 2, recognition error rate and reading time measured in seconds were investigated for one Chinese character string composed of characters of minimally legible size versus conventional equal-size characters presented in a normal reading condition. Recognition error rates for the minimally legible size conditions were lower than those for the conventional size conditions. The reading times for the former were shorter. These results should provide a valuable reference for designing informational formats, literacy teaching, and the study of simplifying Chinese characters.

Adult↗
PubMed2002

Genetic parameters of dairy character, protein yield, clinical mastitis, and other diseases in the Danish Holstein cattle.

The primary aim of this study was to estimate genetic correlations between dairy character, protein yield, clinical mastitis, and other diseases. Data consisted of first lactation records of Danish Holstein cows calving from 1990 to 1999. After editing, the data included records on 934,639 cows, of which 101,853 were assessed for dairy character, 472,421 for diseases, and 834,993 for protein yield. The disease traits were defined as binary traits in the period from 10 d before to 50 d after calving for clinical mastitis, and from 10 d before to 100 d after calving for diseases other than mastitis. Data were analyzed with a linear sire model using the method of AI-REML. Heritabilities were estimated to be 0.265 for protein yield, 0.261 for dairy character, 0.035 for clinical mastitis, and 0.020 for diseases other than mastitis. Estimates of genetic correlations between protein yield and dairy character, protein yield and clinical mastitis, and protein yield and diseases other than mastitis were 0.38, 0.33, and 0.14. Between the two disease traits, the genetic correlation was 0.24. The genetic correlation between dairy character and clinical mastitis was 0.24. Between dairy character and diseases other than mastitis the genetic correlation was 0.41. Thus, cows with high score for dairy character were more prone to diseases. The genetic correlation between dairy character and the disease traits, when both traits were adjusted for protein yield, was 0.13 for clinical mastitis and 0.39 for diseases other than mastitis. These findings suggest that, dairy character should be given a negative rather than a positive weight in the breeding goal.

Animals↗
PubMed2002

The accessibility of characters in single sentences: proper names, common nouns, and first mention.

Accessibility of characters in two-character sentences (e.g., The butler helped Calvin at the wedding reception) was investigated with a probe recognition task. Probes were either the first character (e.g., butler) or the second character (e.g., Calvin) in a sentence and were designated by proper names or common nouns crossed with name or noun nonprobes. Results show that (1) probes in first position are more accessible than those in second position, but not when noun probes are paired with name nonprobes, (2) characters designated by names are generally more accessible than those designated by nouns, and (3) the first name in a sentence is more available than other characters, regardless of position. Thus, accessibility of characters in a sentence seems dependent on discourse function, with named characters seen as main characters, rather than on nondiscourse-related factors, such as temporal distinctiveness.

Attention↗
PubMed1998

[Role of whole letter shape cues in Chinese character identification].

Two experiments were designed to examine the way Chinese characters (Kanji) are identified. In the first experiment, subjects reported whether the stimulus was a correct character of a pseudo-character. The decision latencies were longer when parts of character (Bushu) were rotated than when whole characters were rotated. If whole-shape cues of Chinese characters contribute to identification, distortions of these shapes by partial rotation should have negative effects on the recognizability of characters. The results of the first experiment supported this expectation. In the second experiment, subjects reported whether the stimulus was a two-letter-word or a nonword. In this case, the latencies when the whole stimulus was rotated did not differ from the latencies when only one character was rotated. The results suggested that identification of words written in Chinese characters did not rely on word-shape cues.

Adult↗
PubMed2002

[Effects of neighborhood size and kanji character frequency on lexical decision of Japanese kanji compound words].

The purpose of this study was to make a clear distinction between the effects of neighborhood size (Coltheart, Davelaar, Jonasson, & Besner, 1977) and that of kanji character frequency on the processing of two kanji compound words (jukugo). Kanji characters found in many compound words tend to be frequent, so neighborhood size of jukugo and the character frequency of the component kanji of these jukugo tend to be interrelated. In this study, the effect of neighborhood size on jukugo with medium subjective frequency was investigated controlling kanji character frequency. In an experiment using a lexical decision task with 30 participants, neighborhood size, front kanji character frequency, and rear kanji character frequency of jukugo were manipulated. The results showed that both the neighborhood size and the kanji character frequency affected the lexical decision of jukugo. The fact that there was no interaction between front and rear kanji character frequencies suggests that front and rear characters of jukugo with medium frequency were processed in a serial fashion.

Adolescent↗
PubMedDate not supplied

[Some notes on relation between taxon and character in taxonomy (regarding the paper of A.A. Stekol'nikov "A problem of truth...", Zhurnal Obshchei Biologii. 2003.V.64. No 4. P.367-368)].

Under brief consideration is the problem of primary or secondary status of the judgments about taxa relative to the judgments about characters in the biological classifications. The following formal definition of taxonomic system (classification) TS is provided: TS = BT[T, C(t), R(t), R(c), R(tc)], where BT is a biological theory constituting content-wise background of the system, T is a set of taxa, C(t) is a set of taxonomic characters, R(t) is a set of relationships among taxa (similarity, kinship, etc.), R(c) is a set of relationships among characters (homology, etc.), and R(tc) is a set of correspondences among taxa and characters. The latter correspondences may be complete or incomplete. At ontological level, there two basical traditions exist in biological systematics regarding R(tc) according to which the biological diversity is patterned either as a set of groups of organisms (taxa) or as a set of their properties (characters). In the first case, taxon is "primary" relative to character (in cladistics); in its opposite, character is "primary" relative to taxon (in scholasticism, classical typology, classical phylogenetics). At epistemological level, incompleteness of the taxon-character correspondence makes classificatory procedure iterative and taxonomic diagnoses context-dependent. The interative nature of classificatory procedure makes the "primary" or "secondary" status of both taxa and characters relative and alternating. This makes it necessary to introduces a kind of uncertainty relation in biological systematics which means impossibility of simultaneous definition of both extensional and intentional parameters of the taxonomic system at each step of classificatory iterations.

Biodiversity↗
PubMed2001

Using heterochrony plots to detect the dissociated coevolution of characters.

The comparison of developmental sequences among species is notoriously difficult. Here, heterochrony plots are introduced as a new graphic method to detect temporal shifts in the development of characters in pair-wise species comparisons. Plotting the timing of character development in one species against the timing of character development in another species allows us to compare a principally unlimited number of characters simultaneously and can detect whether suites of characters are dissociated from one another or not. Such heterochrony plots can be embedded into a comparative phylogenetic analysis in order to establish whether observed patterns of character codissociation are indeed due to their dissociated coevolution. Comparative phylogenetic analysis may also reveal multiple independent events of dissociated coevolution of the same suite of characters in a certain lineage, suggesting that the characters of this suite reciprocally constrain their evolutionary modifiability, thereby forming a unit of evolution. This ability to identify units of evolution is a prerequisite for assessing the validity of recently proposed scenarios, suggesting that modules of development and/or function tend to act as units of evolution. Starting from a detailed heterochrony plot comparing development in the direct developing frog Eleutherodactylus coqui and in the biphasically developing frog Discoglossus pictus, this comparative approach is illustrated focusing on the evolution of development of limbs, the nervous system and the pharyngeal arches in amphibians.

Amphibians↗
PubMed1985

Differential cerebral involvement in perceiving Chinese characters: levels of processing approach.

Three experiments were designed to determine the accuracy and latency with which right-handed Chinese university students (12 females and 12 males) recognized Chinese characters in the left and right visual half-fields (VHFs). The experiments varied in the "depth" of processing required. Experiment 1 was a lexical decision task in which the configuration of the stimulus (a real Chinese character or the mirror image of a real character) determined whether the grapheme was an actual character. Experiment 2 required phonological processing; i.e., subjects had to decide whether a character (or a foil) matched the sound of an orally presented Chinese character. Experiment 3 required semantic processing; i.e., subjects had to decide if a character (or a foil) belonged to a particular semantic category. In each experiment, single characters were presented unilaterally for 150 msec. There was a significant right VHF superiority for accuracy scores for Experiments 2 and 3 but not for Experiment 1. None of the experiments yielded significant visual asymmetries in reaction time. The results do not support previous claims of orthography-specific laterality, but instead show that laterality effects for morphemic stimuli vary with the orthographic, phonological, and semantic processing demands of the task.

Adult↗
PubMed2004

Inferring hominoid and early hominid phylogeny using craniodental characters: the role of fossil taxa.

Recent discoveries of new fossil hominid species have been accompanied by several phylogenetic hypotheses. All of these hypotheses are based on a consideration of hominid craniodental morphology. However, Collard and Wood (2000) suggested that cladograms derived from craniodental data are inconsistent with the prevailing hypothesis of ape phylogeny based on molecular data. The implication of their study is that craniodental characters are unreliable indicators of phylogeny in hominoids and fossil hominids but, notably, their analysis did not include extinct species. We report here on a cladistic analysis designed to test whether the inclusion of fossil taxa affects the ability of morphological characters to recover the molecular ape phylogeny. In the process of doing so, the study tests both Collard and Wood's (2000) hypothesis of character reliability, and the several recently proposed hypotheses of early hominid phylogeny. One hundred and ninety-eight craniodental characters were examined, including 109 traits that traditionally have been of interest in prior studies of hominoid and early hominid phylogeny, and 89 craniometric traits that represent size-corrected linear dimensions measured between standard cranial landmarks. The characters were partitioned into two data sets. One set contained all of the characters, and the other omitted the craniometric characters. Six parsimony analyses were performed; each data set was analyzed three times, once using an ingroup that consisted only of extant hominoids, a second time using an ingroup of extant hominoids and extinct early hominids, and a third time excluding Kenyanthropus platyops. Results suggest that the inclusion of fossil taxa can play a significant role in phylogenetic analysis. Analyses that examined only extant taxa produced most parsimonious cladograms that were inconsistent with the ape molecular tree. In contrast, analyses that included fossil hominids were consistent with that tree. This consistency refutes the basis for the hypothesis that craniodental characters are unreliable for reconstructing phylogenetic relationships. Regarding early hominids, the relationships of Sahelanthropus tchadensis and Ardipithecus ramidus were relatively unstable. However, there is tentative support for the hypotheses that S. tchadensis is the sister taxon of all other hominids. There is support for the hypothesis that A. anamensis is the sister taxon of all hominids except S. tchadensis and Ar. ramidus. There is no compelling support for the hypothesis that Kenyanthropus platyops shares especially close affinities with Homo rudolfensis. Rather, K. platyops is nested within the Homo + Paranthropus + Australopithecus africanus clade. If K. platyops is a valid species, these relationships suggest that Homo and Paranthropus are likely to have diverged from other hominids much earlier than previously supposed. There is no support for the hypothesis that A. garhi is either the sister taxon or direct ancestor of the genus Homo. Phylogenetic relationships indicate that Australopithecus is paraphyletic. Thus, A. anamensis and A. garhi should be allocated to new genera.

Animals↗
PubMed2004

Sublexical processing in visual recognition of Chinese characters: evidence from repetition blindness for subcharacter components.

Repetition blindness (RB) refers to the failure to detect the second occurrence of a repeated item in rapid serial visual presentation (RSVP). In two experiments using RSVP, the ability to report two critical characters was found to be impaired when these two characters were identical (Experiment 1) or similar by sharing one repeated component (Experiment 2), as opposed to when they were different characters with no common components. RB for the whole character occurred when the exposure duration was more than 50 ms with one intervening character between the two critical characters (lag=1), whereas RB for subcharacter components was more evident at exposure durations shorter than 50 ms with no intervening character (lag=0). These results provide support for the model of sublexical processing in Chinese character recognition.

Cognition↗