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PubMed1999

Mapping quantitative trait loci for murine growth: a closer look at genetic architecture.

Over 20 years ago, D. S. Falconer and others launched an important avenue of research into the quantitative of body size growth in mice. This study continues in that tradition by locating quantitative trait loci (QTLs) responsible for murine growth, such as age-specific weights and growth periods, and examining the genetic architecture for body weight. We identified a large number of potential QTLs in an earlier F2 intercross (Intercross I) of the SM/J and LG/J inbred mouse strains. Many of these QTLs are replicated in a second F2 intercross (Intercross II) between the same two strains. These replicated regions provide candidate regions for future fine-mapping studies. We also examined body size and growth QTLs using the combined data set from these two intercrosses, resulting in 96 microsatellite markers being scored for 1045 individuals. An examination of the genetic architecture for age-specific weight and growth periods resulted in locating 20 separate QTLs, which were mainly additive in nature, although dominance was found to affect early growth and body size. QTLs affecting early and late growth were generally distinct, mapping to separate chromosome locations. This QTL pattern indicates largely separate genetic and physiological systems for early and later murine growth, as Falconer suggested. We also found sex-specific QTLs for body size with implications for the evolution of sexual dimorphism.

Aging↗
PubMed1996

The architecture of psychological management: the Irish asylums (1801-1922).

This analysis examines some of the psychological, philosophical and sociological motives behind the development of pauper lunatic asylum architecture in Ireland during the time of the Anglo-Irish union (1801-1922). Ground plans and structural features are used to define five psycho-architectonic generations. While isolation and classification were the prime objectives in the first public asylum in Ireland (1810-1814), a combination of the ideas of a psychological, 'moral', management and 'panoptic' architecture led to a radial institutional design during the next phase of construction (1817-1835). The asylums of the third generation (1845-1855) lacked 'panoptic' features but they were still intended to allow a proper 'moral' management of the inmates, and to create a therapeutic family environment. By the time the institutions of the fourth epoch were erected (1862-1869) the 'moral' treatment approach had been given up, and asylums were built to allow a psychological management by 'association'. The last institutions (1894-1922) built before Ireland's acquisition of Dominion status (1922) were intended to foster the development of a curative society.

History, 19th Century↗
PubMed2026

Unravelling sex differences in the genetic architecture of anxiety.

BACKGROUND: Anxiety disorders show striking sex differences in prevalence, symptoms, and clinical characteristics, shaping how they manifest and are experienced. METHODS: Here, we report the first sex-specific meta-analysis of genome-wide association studies (GWAS) of anxiety, leveraging two of the largest biobank datasets, UK Biobank and All of Us, comprising 85,042 female cases with 196,789 controls and 36,732 male cases with 136,924 controls. Functional annotation, sex-specific polygenic scores (PGS), and genetic correlations were performed to assess genetic differences and functional implications. RESULTS: In females, 21 lead SNPs were significantly associated with anxiety, compared to five in males. Although the genetic correlation between sexes was high, it was significantly different from one, indicating partially distinct genetic architectures. In addition, both the SNP-based observed and liability-scale heritabilities (assuming a 2:1 female-to-male prevalence ratio) were significantly higher in females. Gene-based tests and functional prioritization identified different genes associated with anxiety in females and males. Moreover, genetic correlation analyses revealed stronger associations of female anxiety with attention-deficit/hyperactivity disorder (ADHD) and body mass index (BMI), whereas male anxiety showed stronger correlations with waist-hip-ratio-adjusted BMI. CONCLUSIONS: While the overall genetic architecture of anxiety is largely shared, our findings reveal distinct sex-specific genetic associations and correlations, highlighting the value of analyzing the sexes separately to uncover genetic signals that may be masked in sex-combined samples.

Female↗
PubMed2006

Electroanalysis using macro-, micro-, and nanochemical architectures on electrode surfaces. Bulk surface modification of glassy carbon microspheres with gold nanoparticles and their electrical wiring using carbon nanotubes.

Gold nanoparticles (approximately 30-60 nm in diameter) were deposited onto the surface of glassy carbon microspheres (10-20 microm) through electroless plating to produce bulk (i.e., gram) quantities of nanoparticle surface-modified microspheres. The gold nanoparticle-modified powder was then characterized by means of scanning electron microscopy and cyclic voltammetry. The voltammetric response of a macroelectrode consisting of a film of gold nanoparticle-modified glassy carbon microspheres, bound together and "wired-up" using multiwalled carbon nanotubes (MWCNTs), was investigated. We demonstrate that by intelligently exploiting both nano- and microchemical architectures and wiring up the electroactive centers using MWCNTs in this way, we can obtain macroelectrode voltammetric behavior while only using approximately 1% by mass of the expensive gold material that would be required to construct the equivalent gold film macrodisk electrode. The potential utility of electrodes constructed using chemical architectures such as this was demonstrated by applying them to the analytical determination of arsenic(III) concentration. An optimized limit of detection of 2.5 ppb was obtained.

Electrochemistry↗
PubMedDate not supplied

Effect of molecular architecture of poly(N-isopropylacrylamide)-trypsin conjugates on their solution and enzymatic properties.

Polymer-enzyme hybrid conjugates modified by a temperature-responsive polymer, poly(N-isopropylacrylamide) (PIPAAm), have been synthesized. We have investigated the molecular architecture of PIPAAm-enzyme conjugates by preparing two types of PIPAAm-trypsin conjugates, wherein PIPAAm chains are attached by either single-end or multipoint chemistry. A semitelechelic co-oligomer (IDc) was attached to trypsin by single-point conjugation (IDc-trypsin). A copolymer (PIDAAc) consisting of acrylic acid and IPAAm randomly linked in polymer chains was attached to trypsin using multipoint conjugation (PIDAAc-trypsin). Both conjugates exhibited reversible temperature-responsive phase separation. The IDc-trypsin conjugate exhibited phase separation at the same temperature as pure IDc, due to the highly mobile free polymer end group which remains sensitive to small temperature changes. The PIDAAc-trypsin conjugate precipitated at higher temperatures than pure PIDAAc, whose movement was restricted by multiple binding points. Enzyme stability in solution was improved after introduction of PIPAAm chains, which prevented autolysis attributed to conjugate steric hindrance. Stability under repeated temperature cycling was also dependent on the architecture of conjugates; the IDc-trypsin conjugate was more stable than the PIDAAc-trypsin. As a consequence, single-end conjugation of polymer to enzyme provides novel bioconjugate with novel functionality attributed to attached polymer while retaining native biological function with high stability.

Acrylic Resins↗
PubMed2006

Architecture of a gamma retroviral genomic RNA dimer.

Retroviral genomes contain two sense-strand RNAs that are noncovalently linked at their 5' ends, forming a dimer. Establishing a structure for this dimer is an obligatory first step toward understanding the fundamental role of the dimeric RNA in retroviral biology. We developed a secondary structure model for the minimal dimerization active sequence (MiDAS) for the Moloney murine sarcoma virus in the final dimer state using selective 2'-hydroxyl acylation analyzed by primer extension (SHAPE). In this model, two self-complementary, or palindromic, sequences (PAL1 and PAL2) form extended intermolecular duplexes of 10 and 16 base pairs, respectively. The monomeric starting state was shown previously to contain a flexible domain in which nucleotides do not form stable interactions with other parts of the RNA. In the final dimer state, portions of this initial flexible domain form stable base pairs, while previously base-paired elements lie in a new flexible domain. Thus, partially overlapping and structurally well-defined flexible domains are prominent features of both monomer and dimer states. We then used hydroxyl radical cleavage experiments to characterize the global architecture of the dimer state. Extensive regions, including portions of both PAL1 and PAL2, are occluded from solvent-based cleavage indicating that the MiDAS domain does not function simply as a collection of autonomous secondary structure elements. Instead, the retroviral dimerization domain adopts a compact architecture characterized by close packing of its constituent helices.

Base Sequence↗
PubMed2005

pH-dependent assembly of Keggin-based supramolecular architecture.

Three Keggin-based supramolecular architectures were synthesized on the basis of same molecular building units, showing that the pH value of the reaction plays a crucial role in controlling the topological structures of the supramolecular architectures.

Journal Article↗
PubMed2002

C3-symmetrical supramolecular architectures: fibers and organic gels from discotic trisamides and trisureas.

Hydrogen bonded C(3)-symmetrical molecules that associate into supramolecular stacks are described. Structural mutation on these molecules has been performed to elucidate the contribution of the different secondary interactions (hydrogen bonding, pi-pi stacking) to the self-assembly of the disks into chiral stacks. Twelve C(3)-symmetrical molecules have been investigated, six of which contain three central amide functionalities (1a-f) and six of which contain three central urea groups (2a-f). Peripheral groups of the disks are "small", "medium", or "large", half of them being achiral and the other half being chiral, to enable investigation of the supramolecular architectures with CD spectroscopy. In all of the cases, elongated, helical stacks are formed in apolar solution, except for the "medium" amide disks 1c/d. The elongated stacks of the C(3)-symmetrical disks form gels, which are visualized by AFM and SANS, and this confirms the directionality of the interactions. For the "large" urea disk, 2f, fibers with a length of up to 2 microm are observed. Temperature dependent and "sergeants-and-soldiers" CD measurements reveal that the urea stacks are much more rigid than the corresponding amide ones. In case of the "medium" urea disks, 2c/d, a true rigid rod, is formed. Where amide disks immediately reach their thermodynamic equilibrium, kinetic factors seem to govern urea aggregation. In a number of experiments aimed at reversibility with the urea stacks, hysteresis is observed, implying that these urea disks initially form a poorly defined stack, which subsequently transforms slowly into a well-defined, chiral architecture.

Amides↗
PubMed2002

A facile approach to architecturally defined nanoparticles via intramolecular chain collapse.

A novel approach is presented for the controlled intramolecular collapse of linear polymer chains to give well-defined single-molecule nanoparticles whose structure is directly related to the original linear polymer. By employing a combination of living free radical polymerization and benzocyclobutene (BCB) chemistry, nanoparticles can be routinely prepared in multigram quantities with the size being accurately controlled by either the initial degree of polymerization of the linear chain or the level of incorporation of the BCB coupling groups. The latter also allows the cross-link density of the final nanoparticles to be manipulated. In analogy with dendritic macromolecules, a significant reduction of up to 75% in the hydrodynamic volume is observed on going from the starting random coil linear chains to the corresponding nanoparticles. The facile nature of the living free radical process also permits wide variation in monomer selection and functional group incorporation and allows novel macromolecular architectures to be prepared. Furthermore, the use of block copolymers functionalized with benzocyclobutene groups in only one of the blocks gives, after intramolecular collapse, a hybrid architecture in which a single linear polymer chain is attached to the globular nanoparticle.

Acrylic Resins↗
PubMed2003

Self-assembly, structure, and dynamic interconversion of metallosupramolecular architectures generated by Pb(II) binding-induced unfolding of a helical ligand.

The binding of lead(II) cations to the terpyridine-type subunits of the helical ligand 1 leads to the self-assembly of different polynuclear metallosupramolecular architectures of nanometric size. Three different entities are generated and may be interconverted as a function of metal/ligand stoichiometry: a [4 x 4]Pb(16)(II) grid-type array 2, a [4 # 4]Pb(12)(II) double-cross species 4, and an intermediate complex 3. The structures of 2 and 4 have been confirmed by X-ray crystallography; that of 3 is based on NMR spectral data. The interconversion of the three species generates dynamic diversity and represents an expression of constitutional dynamic chemistry. In the course of ion binding, the helical molecules of ligand 1 unwrap to yield fully extended strands arranged in perpendicular fashion in the architectures 2-4 generated. This process amounts to molecular motions in two directions which confer to the present systems characteristics of two-dimensional nanomechanical devices, capable of performing 2D-contraction/extension motions. The triple features of self-organization, dynamic interconversion, and potential addressability displayed by the processes described trace a self-fabrication approach to nanoscience and nanotechnology.

Journal Article↗
PubMed2004

Tuning the architecture of mesostructures by electrodeposition.

When the dimension of materials decreases to mesoscale, their properties can change dramatically, depending on the boundary conditions imposed by the sample architecture including geometry, morphology, and hierarchical structures. Here we show that electrodeposition, a method for reducing materials from a solution onto a substrate, can provide a versatile pathway to tailor the architecture of mesostructures. Novel lead (Pb) structures ranging from nanowires, mesoparticles with octahedral, decahedral, and icosahedral shapes to porous nanowires, multipods, nanobrushes, and even snowflake-shaped structures were synthesized through systematically exploring electrodeposition parameters including reduction potentials, solution concentration, starting materials, supporting electrolytes, and surfactants.

Journal Article↗
PubMed2005

Controlling molecular diffusion in self-spreading lipid bilayer using periodic array of ultra-small metallic architecture on solid surface.

Diffusion of target molecules incorporated in the self-spreading lipid bilayer was controlled by the introduction of periodic array of metallic architecture on solid surface. Retardation of the progress of target molecules became significant when the size of gap between small metal architectures was less than a few hundred nanometers. The self-spreading dynamics of the lipid bilayer depending on the size of the small gap were analyzed semiquantitatively. Estimated change in the driving force of the spreading layer suggests that highly localized compression of the spreading layer causes selective segregation of molecules.

Chemical Phenomena↗
PubMed2006

Stepwise formation and characterization of covalently linked multiporphyrin-imide architectures on Si(100).

A major challenge in molecular electronics and related fields entails the fabrication of elaborate molecular architectures on electroactive surfaces to yield hybrid molecular/semiconductor systems. A method has been developed for the stepwise synthesis of oligomers of porphyrins linked covalently via imide units. A triallyl-porphyrin bearing an amino group serves as the base unit on Si(100), and the alternating use of a dianhydride (3,3',4,4'-biphenyltetracarboxylic dianhydride) and a porphyrin-diamine for reaction enables the rapid and simple buildup of oligomers composed of 2-5 porphyrins. The properties of these porphyrin "multad" films on Si(100) were interrogated using a variety of techniques. The charge densities of the redox-active porphyrin oligomers were determined via electrochemical methods. The stepwise growth was evaluated in detail via Fourier transform infrared (FTIR) spectroscopy and by selected X-ray photoelectron spectroscopic (XPS) studies. The morphology was probed via AFM methods. Finally, the thickness was evaluated by using a combination of ellipsometry and AFM height profiling, accompanied by selected XPS studies. Collectively, these studies demonstrate that high charge density, ultrathin, multiporphyrin films of relatively well-controlled thickness can be grown in a stepwise fashion using the imide-forming reaction. The increased charge densities afforded by the porphyrin multads may prove important for the fabrication of molecular-based information-storage devices. This bottom-up process for construction of surface-tethered molecular architectures complements the top-down lithographic approach for construction of functional devices with nanoscale dimensions.

Journal Article↗
PubMed2006

Investigation of stepwise covalent synthesis on a surface yielding porphyrin-based multicomponent architectures.

Porphyrins have been shown to be a viable medium for use in molecular-based information storage applications. The success of this application requires the construction of a stack of components ("electroactive surface/tether/charge-storage molecule/linker/electrolyte/top contact") that can withstand high-temperature conditions during fabrication (up to 400 degrees C) and operation (up to 140 degrees C). To identify suitable chemistry that enables in situ stepwise synthesis of covalently linked architectures on an electroactive surface, three sets of zinc porphyrins (22 altogether) have been prepared. In the set designed to form the base layer on a surface, each porphyrin incorporates a surface attachment group (triallyl tripod or vinyl monopod) and a distal functional group (e.g., pentafluorophenyl, amine, bromo, carboxy) for elaboration after surface attachment. A second set designed for in situ dyad construction incorporates a single functional group (alcohol, isothiocyanato) that is complementary to the functional group in the base porphyrins. A third set designed for in situ multad construction incorporates two identical functional groups (bromo, alcohol, active methylene, amine, isothiocyanato) in a trans configuration (5,15-positions in the porphyrin). Each porphyrin that bears a surface attachment group was found to form a good quality monolayer on Si(100) as evidenced by the voltammetric and vibrational signatures. One particularly successful chemistry identified for stepwise growth entailed reaction of a surface-tethered porphyrin-amine with a dianhydride (e.g., 3,3',4,4'-biphenyltetracarboxylic dianhydride), forming the monoimide/monoanhydride. Subsequent reaction with a diamine (e.g., 4,4'-methylene-bis(2,6-dimethylaniline)) gave the bis(imide) bearing a terminal amine. Repetition of this stepwise growth process afforded surface-bound oligo-imide architectures composed of alternating components without any reliance on protecting groups. Taken together, the ability to prepare covalently linked constructs on a surface without protecting groups in a stepwise manner augurs well for the systematic preparation of a wide variety of functional molecular devices.

Journal Article↗
PubMed2005

Fabrication of malachite with a hierarchical sphere-like architecture.

Malachite (Cu2(OH)2CO3) with a hierarchical sphere-like architecture has been successfully synthesized via a simple and mild hydrothermal route in the absence of any external inorganic additives or organic structure-directing templates. Powder X-ray diffraction, scanning electron microscopy, and Fourier transmission infrared spectrometry are used to characterize various properties of the obtained malachite samples. The hierarchical malachite particles are uniform spheres with a diameter of 10-20 microm, which are comprised of numerous two-dimensional microplatelets paralleling the sphere surface. The initial concentration of reagents, the hydrothermal reaction time, and temperature are important factors which dominantly affect the evolution of crystal morphologies. The growth of the hierarchical architecture is believed to be a layer-by-layer growth process. Further, copper oxide with the similar morphology can be easily obtained from the as-prepared malachite.

Copper↗
PubMed2006

Tunable one-dimensional silver-silica nanopeapod architectures.

Silica-coated silver nanowires can be chemically treated to produce a "peapod" architecture in which silver peas are embedded in silica pods. The silver "pea" dimension and interparticle spacings are controllable down to approximately 50 nm. This architecture is potentially useful for chemical sensing, plasmonic, or catalytic applications.

Journal Article↗
PubMed2006

Sum frequency generation study of Langmuir Blodgett film architecture.

We present sum frequency generation vibrational spectroscopy data on monolayer films of pure stearonitrile and mixed films of stearonitrile and ferric stearate deposited by the Langmuir Blodgett technique. Films ranging in composition from pure stearonitrile to 65% stearonitrile/35% ferric stearate deposit in a head-to-tail, Z-type architecture while films of composition <65% stearonitrile deposit in a head-to-head, tail-to-tail, Y-type structure. The vibrational spectra of the monolayer films corresponding to these two different architectures show distinct and characteristic features in their CH stretching regions. Spectral analysis indicates little difference in the modes associated with the terminal methyl groups but large differences in the methylene CH(2) vibrational modes. These spectral differences are consistent with alkyl chains that possess uncompensated methylene oscillator strength arising from portions of the chain that are bent. This behavior is consistent with the energetics expected from a close-packed monolayer of stearonitrile molecules whose CN headgroups possess sizable dipole moments and are expected to adopt a large center-to-center angle to minimize electrostatic, dipole-dipole repulsive interactions.

Journal Article↗
PubMed2006

Molecular architecture of oligothiophene on a highly oriented pyrolytic graphite surface by employing hydrogen bondings.

To achieve a controllable and predictable molecular architecture on a two-dimensional (2D) surface, a series of oligothiophenes with carboxylic groups and alkane chains were synthesized. The alkane chains and carboxylic groups, which can form hydrogen bonding, were intentionally designed in different positions of the oligothiophenes. The resulted molecular architectures by using the so-prepared oligothiophenes on a highly oriented pyrolytic graphite (HOPG) surface were investigated by scanning tunneling microscopy (STM) and density functional theory (DFT). It is found that the hydrogen bonding plays an essential role in the formation of the ordered assemblies. A controlled 2D molecular assembly could be fabricated by using hydrogen bondings.

Journal Article↗