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PubMed1975

The Papago psychology service: a community mental health program on an American Indian reservation.

A community psychology service run by the Papago Indian tribe and staffed largely by Papago Indians who have been trained as mental health workers is described. This service is unique among mental health services for Indians in that the tribe has complete control of the funds for the service and sets its own policies. It was developed for a rather traditional Indian group, and the culture, the traditions, and the wishes of the Papago community were respected. Consultation with medicine men was built into the program from the start, and adaptation of mental health techniques to fit the culture is stressed. Before this clinic was established, few mental health resources were directly available to the reservation. Similar to other Indian tribes, the Papagos are economically disadvantaged, with an unemployment rate of over 50%, low educational attainment, and very high rates of alcoholism, suicide, and vehicular accidents. The topics covered are the tribe's view of health programs for its people, the present Papago community and traditional means of treatment, traditional psychotherapy adapted to Papago culture, the indigenous Papago mental health worker, and the non-Indian professional consultant.

Administrative Personnel↗
PubMed2006

High KIR diversity in Amerindians is maintained using few gene-content haplotypes.

Interaction between killer cell immunoglobulin-like receptors (KIR) and cognate HLA class I ligands influences the innate and adaptive immune response to infection. The KIR family varies in gene content and allelic polymorphism, thereby, distinguishing individuals and populations. KIR gene content was determined for 230 individuals from three Amerindian tribes from Venezuela: the Yucpa, Bari and Warao. Gene-content haplotypes could be assigned to 212 individuals (92%) because only five different haplotypes were present-group A and four group B. Six different haplotype combinations accounted for >80% of individuals. Each tribe has distinctive genotype frequencies. Despite few haplotypes, all 14 KIR genes are at high frequency in the three tribes, with the exception of 2DS3. Each population has an even frequency of group A and B haplotypes. Allele-level analysis of 3DL1/S1 distinguished five group A haplotypes and six group B haplotypes. The high frequency and divergence of the KIR haplotypes in the Amerindian tribes provide greater KIR diversity than is present in many larger populations. An extreme case being the Yucpa, for whom two gene-content haplotypes account for >90% of the population. These comprise the group A haplotype and a group B haplotype containing all the KIR genes, except 2DS3, that typify the group B haplotypes. Here is clear evidence for balancing selection on the KIR system and the biological importance of both A and B haplotypes for the survival of human populations.

Gene Frequency↗
PubMed2006

Environmental justice in Indian country: dumpsite remediation on the Swinomish Indian reservation.

The U.S. Environmental Protection Agency (EPA) defines environmental justice as the "fair treatment for people of all races, cultures, and incomes, regarding the development of environmental laws, regulations, and policies." The last decade has focused considerable national attention on the environmental pollution inequity that persists among the nation's poorest communities. Despite these environmental justice efforts, poor communities continue to face adverse environmental conditions. For the more than 550 Native American communities, the struggle to attain environmental justice is more than a matter of enforcing national laws equitably; it is also a matter of a federal trust duty for the protection of Indian lands and natural resources, honoring a promise that Native American homelands would forever be sustainable. Equally important is the federal promise to assist tribes in managing their reservation environments under their reserved powers of self-government, an attribute that most distinguishes tribes from other communities. The PM Northwest, Inc. (PMNW) dumpsite is located within the boundaries of the Swinomish Indian Reservation in Washington State. Between approximately 1958 and 1970, PMNW contracted with local oil refineries to dispose of hazardous wastes from their operations at the reservation dumpsite. Almost two decades would pass before the Swinomish tribe was able to persuade EPA that a cleanup action under Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) was warranted. This article reviews the enduring struggle to achieve Indian environmental justice in the Swinomish homeland, a process that was dependent upon the development of the tribe's political and environmental management capacity as well as EPA's eventual acknowledgement that Indian environmental justice is integrally linked to its federal trust responsibility.

Environment↗
PubMed2002

Phylogenetic relationships of Combretoideae (Combretaceae) inferred from plastid, nuclear gene and spacer sequences.

Phylogenetic relationships of the subfamily Combretoideae (Combretaceae) were studied based on DNA sequences of nuclear ribosomal internal transcribed spacer (ITS) regions, the plastid rbcL gene and the intergenic spacer between the psaA and ycf3 genes (PY-IGS), including 16 species of eight genera within two traditional tribes of Combretoideae, and two species of the subfamily Strephonematoideae of Combretaceae as outgroups. Phylogenetic trees based on the three data sets (ITS, rbcL, and PY-IGS) were generated by using maximum parsimony (MP) and maximum likelihood (ML) analyses. Partition-homogeneity tests indicated that the three data sets and the combined data set are homogeneous. In the combined phylogenetic trees, all ingroup taxa are divided into two main clades, which correspond to the two tribes Laguncularieae and Combreteae. In the Laguncularieae clade, two mangrove genera, Lumnitzera and Laguncularia, are shown to be sister taxa. In the tribe Combreteae, two major clades can be classified: one includes three genera Quisqualis, Combretumand Calycopteris, within which the monophyly of the tribe Combreteae sensu Engler and Diels including Quisqualis and Combretumis strongly supported, and this monophyly is then sister to the monotypic genus Calycopteris; another major clade includes three genera Anogeissus, Terminalia and Conocarpus. There is no support for the monophyly of Terminaliaas it forms a polytomy with Anogeissus. This clade is sister to Conocarpus.

Journal Article↗
PubMed2006

Phylogenetic significance of stylar features in genus Vicia (Leguminosae): an analysis with molecular phylogeny.

Tribe Fabeae consists of five genera, Lathyrus (160 spp.), Lens (4-6 spp.), Pisum (2-3 spp.), Vavilovia (monotypic), and Vicia (160 spp.), and shows a diversity in stylar features. At least six different stylar types are known in the tribe. In order to reclassify the tribe at the rank of genus, we tried to discover apomorphies in stylar features using a molecular phylogenetic study. We surveyed internal transcribed spacer (ITS) sequences of nuclear ribosomal DNA of representative species, selected from each group having different types of styles in the tribe. We paid particular attention in sampling to members of Vicia section Vicilla, as stylar features are heterogeneous within this section. Consequently, our sample set included 15 species of section Vicilla, 23 species of other Fabeae, and two species of Trifolieae, which were used as a sister group of Fabeae. Based on our analysis, we found that a laterally compressed style and an abaxially tufted hairy style would be advanced against a dorsiventrally compressed style and an evenly hairy style, respectively, in genus Vicia. The species group, which shares the latter apomorphy, is composed of 56 species and was dispersed into 11 sections of two subgenera in the recent system of genus Vicia. We consider future revision of Fabeae should treat this species group as a single higher taxon.

Bayes Theorem↗
PubMed2006

Revision of the genus Galagocheles Fain (Acari: Cheyletidae), parasites of galagos (Primates: Galagonidae).

Galagocheles Fain, 1979 (Acari: Cheyletidae), comprising permanent parasites of African prosimian primates (Galagonidae), is revised. An amended diagnosis of the genus based on characters of adults and immatures is given. The type-species, G. lemuricola (Lawrence, 1948), from Otolemur garnetti (Ogilby) (type-host) and O. crassicaudatus Geoffroy, is redescribed, and G. lawrencei n. sp. is described from Galago senegalensis Geoffroy (type-host) and G. moholi Smith. The new species differs from G. lemuricola by its smaller body size, the obtuse posterior end of the opisthosoma in males, and by fine, nude setae ps3 in females. The systematics of the cheyletid tribe Niheliini and host-parasite associations of its species are briefly discussed. The tribe Criokerontini is included to the tribe Niheliini. It is suggested that the ancestors of the tribe Niheliini were predaceous cheyletids associated with the nests of arboreal mammals, and the association of Nihelia spp. on mongooses (Herpestidae) is the result of the host-switching from some ancient arboreal mammal.

Acari↗
PubMed1985

Blood pressure patterns in relation to age, weight and urinary electrolytes in three Kenyan communities.

The blood pressure patterns of three Kenyan communities have been studied: 861 members of the Luo tribe in a rural community, 281 members of the Kamba tribe in a rural community and 310 "urban" Luo living in Nairobi. The slope of linear regression of blood pressure with age was significantly different in each population: rural Luo had the smallest rise with age and urban Luo had the largest rise with age, while the Kamba tribe were in between. The differences could not be accounted for by weight. Urinary electrolyte data showed rural Luo had the lowest sodium ratios (sodium/creatinine, sodium/potassium) and the highest potassium/creatinine ratio: urban Luo had the highest sodium and lowest potassium ratios and rural Kamba had values in between. The differences in blood pressures between the two groups of the same tribe in different environments (rural and urban Luo) were far greater than those between different genetic groups (Kamba and Luo) underlining the importance of environmental factor(s) in the determination of arterial pressure. Furthermore, these data support the theory that the dietary intake of sodium and potassium are the major influential environmental factors affecting blood pressure.

Adolescent↗
PubMed2005

Early divergence among the Alestidae (Teleostei, Ostariophyses, Characiformes): mitochondrial evidences and congruence with morphological data.

The African family Alestidae (Ostariophysii: Characiformes) includes today 13 genera, among which seven are monospecific. The size range observed in the family greatly varies with species ranging from 21 mm up to 130 cm for more than 50 kg. Among the Alestidae, three tribes were previously identified: the Alestini, the Hydrocinini and the Petersiini, that include all the miniaturised species. Previous phylogenetic studies mainly focussed on the relationships between the genera Alestes, Brycinus, Bryconaethiops and Hydrocynus and left the phylogenetic affinities of the genera from the tribe Petersiini unexplored. We assessed the molecular phylogenetic relationships within the family using partial mitochondrial ribosomal DNA sequences of the 12S and 16S genes and evaluated the congruence with available morphological characters by separate and combined analyses. We especially focussed on the phylogenetic status of the tribe Petersiini and further investigated the early divergence among the family. Our results lead to the identification of two major lineages and to the description of three new clades. The relationships inferred allowed us to reject monophyly of the genera Brycinus, Micralestes and Rhabdalestes and to suggest that the genus Bryconaethiops should be removed from the tribe Alestini. We also have shown that miniaturization occurred more than once, contrary to the predictions of the present classification.

Animals↗
PubMed2006

Phylogenetic systematics of the colorful, cyanide-producing millipedes of Appalachia (Polydesmida, Xystodesmidae, Apheloriini) using a total evidence Bayesian approach.

Here, we provide an exemplar-approach phylogeny of the xystodesmid millipede tribe Apheloriini with a focus on genus-group relationships-particularly of the genus Brachoria. Exemplars for the phylogenetic analysis were chosen to represent the maximum breadth of morphological diversity within all nominal genera in the tribe Apheloriini, and to broadly sample the genus Brachoria. In addition, three closely related tribes were used (Rhysodesmini, Nannariini, and Pachydesmini). Morphological and DNA sequence data were scored for Bayesian inference of phylogeny. Phylogenetic analysis resulted in polyphyletic genera Brachoria and Sigmoria, a monophyletic Apheloriini, and a "southern clade" that contains most of the tribal species diversity. We used this phylogeny to track morphological character histories and reconstruct ancestral states using stochastic character mapping. Based on the findings from the character mapping study, the diagnostic feature of the genus Brachoria, the cingulum, evolved independently in two lineages. We compared our phylogeny against prior classifications using Bayes factor hypothesis-testing and found that our phylogenetic hypothesis is inconsistent with the previous hypotheses underlying the most recent classification. With our preferred total-evidence phylogeny as a framework for taxonomic modifications, we describe a new genus, Appalachioria; supply phylogenetic diagnoses of monophyletic taxa; and provide a phylogeny-based classification for the tribe Apheloriini.

Animals↗
PubMed2000

The distribution of iridoids in Bignoniaceae.

The distribution of iridoids among the tribes of Bignoniaceae is shown. In the present work, 18 species from the tribes Bignonieae and Tecomeae as well as one from Eccremocarpeae have been investigated. These data combined with those obtained through a literature review were analysed and showed that iridoids occur predominantly in the tribe Tecomeae. In this tribe, a chemical distintion between the genera Tabebuia and Tecoma was observed: The iridoids in Tabebuia are decarboxylated whereas in Tecoma they are C-4 formylated. The species from Bignonieae are poorly investigated and only few reports have been published, however, the iridoids found are mainly C-4 carboxylated. The only exception, Dolichandra cynanchoides (=Macfadyena cynanchoides), with decarboxylated iridoids, is also morphologically abnormal in Bignonieae.

Journal Article↗
PubMed2003

Cercopithecine Y-chromosome data provide a test of competing morphological evolutionary hypotheses.

We report here the results of the first molecular evolutionary analysis to include members of all 10 extant genera of cercopithecine monkeys. A total of 44 individuals were surveyed for approximately 2.2 kb of the testis-specific protein, Y-chromosome (TSPY). The TSPY sequences were subjected to parsimony analyses in PAUP 4.0, followed by tree comparison tests designed to assess existing morphological hypotheses of cercopithecine evolution. The results of these tests show that the present Y-chromosome dataset unambiguously supports: (1) monophyly of Macaca, (2) polyphyly of the mangabeys (Cercocebus and Lophocebus), (3) paraphyly of Cercopithecus, and (4) inclusion of Allenopithecus and Miopithecus in the tribe Cercopithecini. A number of unexpected Y-chromosome relationships are also discussed, including a pattern suggesting resurrection of the genus Chlorocebus for the guenons currently identified as Erythrocebus patas, Cercopithecus aethiops, and Cercopithecus lhoesti. Relative rate tests reveal significant difference in the TSPY substitution rate across numerous lineages in the tribe Cercopithecini. Because the rate differences follow no obvious phylogenetic pattern, "local" molecular clocks were not employed and divergence dates were not estimated for this tribe. In contrast, similar analysis of the Papionini reveals rate heterogeneity between a single pair of taxonomic groups: Macaca vs. the "African papionins." Divergence dates were therefore calculated for the tribe by calibrating TSPY clocks specific to each of these two clades.

Animals↗
PubMed1999

Rugonema labiatum n. g., n. sp. (Nematoda: Strongyloidea) from the stomach of Macropus irma (Marsupialia: Macropodidae) from Western Australia.

Rugonema labiatum n. g., n. sp. is described from the stomach of Macropus irma (Jourdan) from Western Australia. The new genus possesses four branches to the dorsal ray, has a cylindrical buccal capsule and lacks a cervical groove, placing it within the subfamily Cloacininae Stossich, 1899. The presence of a prominently striated buccal capsule and labial as well as cephalic collars places the genus within the tribe Pharyngostrongylinea Popova, 1952, but it is distinguished from all existing genera within the tribe by the possession of four lips. The presence of lips is an important characteristic of the related tribe Zoniolaiminea (Popova, 1952) and the characters used in distinguishing these two tribes are discussed.

Animals↗
PubMed2003

Goethe's science: an approach to research in American Indian Studies.

In The Wholeness of Nature (1996), Henri Bortoft shows how a Goethean science of qualitative wholeness complements the analytic and causal- explanatory framework that underlies most research in the natural and social sciences. Goethe's insights and methods suggest that a better understanding of Indian tribes may occur when a tribe is regarded as its own abstraction and its own explanation. In Goethe's approach to science, the human mind is an "organ of perception" and researchers are active participants in the way they see the world. Consider an Indian tribe and the goal of Goethean science is to intuitively "see" patterns of interpenetrating relationships in a dynamic process of self-organization that is the tribe. While analytic science and Goethe's science of wholeness are incommensurable, both are true, and neither is comprehensive.

Biological Science Disciplines↗
PubMed1998

Diversity in protein, nuclear DNA, and mtDNA in South Amerinds--agreement or discrepancy?

Two sets of markers and populations were considered in this study: (a) the variability at 17 protein loci and in the sequences of the first hypervariable segment of the mitochondrial DNA (mtDNA) were compared in 10 South American Indian tribes, in a total 3016 and 241 individuals, respectively; and (b) a triple comparison was made, in relation to 17 protein, mtDNA and six hypervariable tandem repeat loci in four Brazilian Indian tribes, involving 1567, 56 and 194 persons, respectively. Both the intrapopulational diversities and the population relationships obtained in these groups with these different sets of markers showed no significant correlation. High levels of heterogeneity were observed both at the protein and hypervariable individual loci, as well between mtDNA sites. The different positions observed for the Yanomama (but not for the other nine tribes) in the trees which summarized the protein and mtDNA data suggest some degree of asymmetric interchange related to sex between them and neighbouring tribes.

Cell Nucleus↗
PubMed2005

Diversity and divergence among the tribal populations of India.

Tribal populations of the Indian subcontinent have been of longstanding interest to anthropologists and human geneticists. To investigate the relationship of Indian tribes to Indian castes and continental populations, we analyzed 45 unlinked autosomal STR loci in 9 tribal groups, 8 castes, and 18 populations from Africa, Europe and East Asia. South Indian tribal populations demonstrate low within-population heterozygosity (range: 0.54 - 0.69), while tribal populations sampled further north and east have higher heterozygosity (range: 0.69 - 0.74). Genetic distance estimates show that tribal Indians are more closely related to caste Indians than to other major groups. Between-tribe differentiation is high and exceeds that for eight sub-Saharan African populations (4.8% vs. 3.7%). Telugu-speaking populations are less differentiated than non-Telugu speakers (F(ST): 0.029 vs. 0.079), but geographic distance was not predictive of genetic affinity between tribes. South Indian tribes show significant population structure, and individuals can be clustered statistically into groups that correspond with their tribal affiliation. These results are consistent with high levels of genetic drift and isolation in Indian tribal populations, particularly those of South India, and they imply that these populations may be potential candidates for linkage disequilibrium and association mapping.

Asia↗
PubMed1970

Village and tribal genetic distances among American Indians, and the possible implications for human evolution.

Pair-wise genetic distances based on six genetic systems (Rh, MNSs, Kidd, Duffy, Diego, and haptoglobins) are presented for seven villages of Makiritare Indians, seven villages of Yanomama Indians, and 12 Indian tribes of Central and South America. It is shown that the mean genetic distance between Indian villages is 85-90 per cent of the distance between tribes. Since in the past, the initial event in the formation of a new tribe was probably the breaking away of one or several related villages from an established tribe, it is clear that this initial event could have profound consequences for subsequent tribal gene frequencies. By the criterion of changes in gene frequency in polymorphic genetic systems, the maximal rate of evolution in the American Indian has been approximately 100 times more rapid than the mean rate suggested by calculations based on amino acid substitutions in certain polypeptides of a variety of organisms. The above-mentioned findings could account in part for this 100-fold difference. Some other factors which might diminish the apparent difference between the results of these two types of calculations are mentioned.

Acculturation↗
PubMed1992

DNA systematics and evolution of the artiodactyl family Bovidae.

Nine additional sequences from representatives of different tribes of the family Bovidae were combined with six published artiodactyl sequences to provide orthologous mtDNA for investigation of bovid phylogeny and evolution. Each species was represented by a homologous 2.7-kilobase-pair stretch of mtDNA for the complete 12S and 16S rRNA genes and three adjacent tRNA genes. These data, when compared to other results, provided evidence for a monophyletic Bovidae and for two clades within the family: one including the tribes Boselaphini, Bovini, and Tragelaphini and another for an Antilopini/Neotragini grouping. All other intrafamilial relationships were only weakly supported. These sequence comparisons suggest that most bovid tribes originated early in the Miocene with all extant lineages present by approximately 16-17 million years ago. Thus, bovid tribes provide an example of rapid cladogenesis, following the origin of families in the infraorder Pecora.

Animals↗
PubMedDate not supplied

Genetic variation at three VNTR loci in three tribal populations of Orissa, India.

BACKGROUND: The variable number of tandem repeats (VNTR) loci are robust, simple and rapid tools for genetic characterization of both individuals and populations. This paper presents data on the distribution of three VNTRs (APOB, YNZ22 and D1S80) in three tribal populations (Gadaba, Kuvi-Khond and Paroja) of the Koraput district of Orissa, India with a view to enlarge our understanding of molecular genetic diversity among these tribes and the usage of these VNTRs in anthropogenetic studies. SUBJECTS AND METHODS: Three tribal populations were genotyped for APOB, YNZ22 and D1S80 loci using the polymerase chain reaction (PCR) technique. Gadaba are an Austro-Asiatic tribe while Kuvi-Khond and Paroja are Dravidian tribes. All samples were collected, with consent, from unrelated individuals. RESULTS: The observed allelic variation in these tribes is comparable with many Indian populations, but they showed significant overall and inter-population variability within the region. Allele *24 was the most common allele at the D1S80 locus in all populations, with Gadabas having the highest frequency (50%) followed by Paroja (32%) and Kuvi-Khond (23%). Gadabas also showed a higher frequency of allele *19 (13%) and *31 (9%) compared to other Indian and European populations. In the Apo B system, allele *37 was the most common in all three populations, with Gadabas having the highest frequency (39%) followed by Paroja (24%) and Kuvi-Khond (21%). This allele is present in high frequencies in other Indian (except Gonds) and European populations. Alleles *33 (17%), *35 (20%) and *45 (12%) were also common in the Gadabas, but Kuvi-Khond showed higher frequencies of *31(10%), *35(13%) and the larger allele *49(16%). Paroja, on the other hand, had higher frequencies of *31 (14%), *33 (17%) and *45 (13%). Allele *49 was also present in Paroja (10%) but was absent in the Gadaba. For the YNZ22 system, allele *4 was the most common in Kuvi-Khond (25%) and Paroja (21.4%), and allele *2 was the predominant allele in the Gadaba (33%). However allele *4 still occurs at relatively high frequency in Gadaba (27%). Allele *2 also occurs at relatively high frequency in Kuvi-Khond (20%) and intermediate frequency in Paroja (11%). Average heterozygosity was relatively low for Gadaba (0.7597 +/- 0.0191) and high for Kuvi-Khond (0.8618 +/- 0.0149) and Paroja (0.8512 +/- 0.0190), perhaps a reflection of effective population size and limitations to mating. The level of gene differentiation is, however, low (3-4%) for the three systems studied in these tribal populations and in data compiled from previous studies from the region. CONCLUSIONS: The VNTRs are polymorphic in the tribal populations studied and there is extensive allelic variation. Gadabas are isolated but Kuvi-Khond and Paroja show clear affinities with the Gonds, a major tribal group of Central India. Overall, allele frequency distribution, heterozygosity and genetic diversity analysis show that genetic diversity observed is socially, linguistically and geographically structured in this region.

Alleles↗