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Invariant representations of visual patterns in a temporal population code.

Mammalian visual systems are characterized by their ability to recognize stimuli invariant to various transformations. Here, we investigate the hypothesis that this ability is achieved by the temporal encoding of visual stimuli. By using a model of a cortical network, we show that this encoding is invariant to several transformations and robust with respect to stimulus variability. Furthermore, we show that the proposed model provides a rapid encoding, in accordance with recent physiological results. Taking into account properties of primary visual cortex, the application of the encoding scheme to an enhanced network demonstrates favorable scaling and high performance in a task humans excel at.

Animals↗

Resuscitation of the surgical neonate.

This article reviews the general principles of resuscitation of a neonate with a surgical disorder. These principles include careful attention to critical management issues of the airway, ventilation, perfusion, nutritional support and thermogenesis. In addition, a variety of surgical disorders in the neonatal period are discussed. For each disorder, early recognition of presentation patterns, efficient work-up strategy, initial management steps, and basic surgical principles are stressed. This framework can provide a basis for successful cooperation between the neonatologist and the pediatric surgeon for the initial care of the neonate requiring surgery.

Blood Circulation↗

[Eyeballs motility in oblique plane among healthy persons].

PURPOSE: The aims of the work was to evaluate the average range of vertical rectus and oblique muscles activity in subjects with no strabismus and with normal organ of sight. I intended to study, if there are some differences in eye motility for each particular muscles according to patients age. MATERIAL AND METHODS: 333 individuals of both genders with normal organ of vision, without strabismus or any history of chronic or inborn diseases, were enrolled. Three equal (n = 111) age groups were formed: group I comprising children aged 6-7 years; group II with youth aged 14-15 years; group III consisting of adults aged 22-26 years. Eyeball motility was studied with Wessely's keratometer. Separately for each eye, in the up-temple and down-temple direction at an angle of 23 degrees to the vertical plane, and in the up-nose and down-nose directions at an angle of 51 degrees to the vertical plane. RESULTS: 1. Mean motility in the up-temple(action of superior rectus muscle) and up-nose (action of inferior oblique muscle) directions ranged from 7 to 8 mm in all groups. 2. Mean motility ranged from 9 to 11 mm in the down-temple (action of inferior rectus muscle) and from 9 to 12 mm in down-nose(action of superior oblique muscle) directions in all groups. CONCLUSIONS: 1. In physiological conditions some of the persons examined, did not stay within the range of normal motility reference. 2. There is an inclination to increase the range depressing eyeball motility with age.

Adolescent↗

Detection of atherosclerosis using autoregressive modelling and principles component analysis to carotid artery Doppler signals.

The purpose of this study was to evaluate principal component analysis method to power spectral density acquired with autoregressive modeling (AR) of carotid artery Doppler signals. Carotid artery Doppler signals from patient with atherosclerosis and healthy subjects were recorded. Afterwards, power spectral densities of these signals were obtained using AR method. The basic differences between the healthy and patients were obtained with 1st principal component obviously. These results could be extrapolated to situations involving noninvasive measurement where PCA can be extremely time saving. As a result the patient and healthy groups are separated clearly from each other via an arbitrary power function y=ax with perfect accuracy resulting in a precision sensitivity and specificity of 100 percent and the use of PCA of physiological waveform is presented as a powerful method likely to be incorporated in future medical signal processing.

Adult↗

Amyloid formation: an emulation of matrix protein assembly?

Although more than 20 different proteins are now associated with the amyloidoses, the fibrils share many properties. Despite disparity in primary and tertiary structures of the subunit proteins, assembled fibrils exhibit similar morphology, binding of Congo red, interaction with Thioflavine T, formation of complexes with serum amyloid P component, apolipoprotein E, several glycosaminoglycans, the receptor for advanced glycation endproducts and cross-recognition by some monoclonal antibodies. Thus, it is probable that the mechanism of amyloid generation involves a generic process that can be evoked by most, if not all, proteins under conditions that degrade the native conformation. As suggested by others, the beta-helix or beta-roll conformation may be the unifying element of fibril conformations. Several proteins that have evolved to form physiologically useful amyloid-like fibrils, as well as some proteins associated with pathological amyloidoses, exhibit sequence repeat patterns that may facilitate beta-roll or beta-helix formation. Threading analyses of 2 natural amyloid-forming proteins, curli and human Pmel 17, indicate compatibility of their primary structures with both beta sandwich and beta-helix conformations, suggesting a possible innate conformational pliability. In addition, these results may suggest that the misfolded form of some proteins that are associated with conformational disease may be the native conformation of other proteins to which they are linked by evolution. Finally, since many matrix and structural proteins are known to incorporate numerous tandem repeat sequence elements, we propose that the mechanism of fibril formation is fundamentally related to a general protein assembly process that is integral to the generation of cells and tissues.

Amino Acid Sequence↗

Recombinant receptors as probes for the study of genetic stability.

Membrane receptors coupled to GTP binding G-proteins constitute one of the largest families of proteins involved in ligand binding, signal transmission and modulation of physiological effects. A large majority of current pharmaceuticals are actually ligands for this type of receptor, including e.g. the catecholamine, dopamine, serotonin and histamine antagonists. In recent years, an impressive number of the genes encoding these receptors have been cloned, sequenced and expressed in model cell lines. Molecular genetics has thus uncovered the existence of a surprisingly large number of homologous receptor subtypes each capable of binding the same natural ligand, but which may be distinguished on the basis of variable recognition patterns of synthetic ligand panels, variable expression during development and differentiation or different G-protein coupling and effector modulation. We have summarized in Table 1 some of the recently cloned receptors and have attempted to group them according to the type of ligand recognized: non peptidic, peptidic or other, including light and olfactory substances. Further information and references can be found in recent reviews.

Animals↗

Coupling of cerebral blood flow and oxygen consumption during physiological activation and deactivation measured with fMRI.

The physiological basis of the blood oxygenation level dependent (BOLD) signal and its dependence on baseline cerebral blood flow (CBF) were investigated by comparing responses to a visual stimulus after physiological changes of the baseline. Eight human subjects were imaged with 3 and 4 T MRI scanners, and both BOLD signal and CBF were simultaneously measured. Subjects viewed a flickering radial checkerboard in a block design experiment, alternating between eyes open or closed during the off periods. Compared to a baseline state with eyes open in a darkened room, substantial deactivation (average change: 2.9 +/- 0.3% BOLD, 22 +/- 2.1% CBF) in the occipital cortex was observed when the eyes were closed. The absolute response during stimulation (average change: 4.4 +/- 0.4% BOLD, 36.3 +/- 3.1% CBF) was independent of the preceding resting condition. We estimated the fractional change in CBF to be approximately 2.2 +/- 0.15 times greater than the fractional change in metabolic rate of oxygen (CMRO2). The changes in CBF and CMRO2 were consistently linearly coupled during activation and deactivation with CBF changes being between approximately 60% and 150% compared to baseline with eyes open. Relative to an assumed baseline oxygen extraction fraction (OEF) of 40%, the estimated OEF decreased to 33 +/- 1.4% during activation and increased to 46 +/- 1.2% during rest with eyes closed. In conclusion, we found that simply closing the eyes creates a large physiological deactivation in the visual cortex, and provides a robust paradigm for studying baseline effects in fMRI. In addition, we propose a feed-forward model for neurovascular coupling which accounts for the changes in OEF seen following baseline changes, including both the current physiological perturbations as well as previously reported pharmacologically induced changes.

Adult↗

Hidden Markov models based on symbolic dynamics for statistical modeling of cardiovascular control in hypertensive pregnancy disorders.

Discrete hidden Markov models (HMMs) were applied to classify pregnancy disorders. The observation sequence was generated by transforming RR and systolic blood pressure time series using symbolic dynamics. Time series were recorded from 15 women with pregnancy-induced hypertension, 34 with preeclampsia and 41 controls beyond 30th gestational week. HMMs with five to ten hidden states were found to be sufficient to characterize different blood pressure variability, whereas significant classification in RR-based HMMs was found using fifteen hidden states. Pregnancy disorders preeclampsia and pregnancy induced hypertension revealed different patho-physiological autonomous regulation supposing different etiology of both disorders.

Algorithms↗

Multichannel wavelet-type decomposition of evoked potentials: model-based recognition of generator activity.

Scalp recording of electrical events allows the evaluation of human cerebral function, but contributions of the specific brain structures generating the recorded activity are ambiguous. This problem is ill-posed and cannot be solved without physiological constraints based on the spatio-temporal characteristics of the generators' activity. In our model-based analysis of evoked potentials for the purpose of generator activity detection, multichannel scalp-recorded signals are decomposed into a combination of wavelets, each of which can describe the neural mass coherent activity of cell assemblies. Elimination of contributions of specific generators and/or distributed background activity can produce physiologically motivated time-frequency filtering. The decomposition and filtering procedures are demonstrated by three examples; simulation of the surface manifestation of known intracranial generators; decomposition and reconstruction of auditory brainstem evoked potentials which reflect the differences among generators of these potentials; and cognitive components of evoked potentials which are diminished in the averaged recording but are clearly detected in single-trial signals.

Algorithms↗

Intracellular distribution of HMG1, HMG2 and UBF change following treatment with cisplatin.

Cisplatin (CDDP) is a widely used cancer chemotherapeutic agent. CDDP forms well characterized intrastrand cross-links between adjacent purines in genomic DNA. In mammalian cells, these lesions are repaired by the nucleotide excision repair system. An early event in the recognition and processing of cis-Pt-DNA adducts may well involve the binding of specific proteins to the sites of damage. Several proteins have been identified, including high mobility group (HMG) proteins 1 and 2 and upstream binding factor (UBF), which recognize CDDP-DNA. However, the physiological significance of this binding has not been established. In this study, we have utilized antibodies to these proteins to examine the effect of CDDP on their intracellular distribution. Marked changes in the immunofluorescent staining pattern of HMG1/HMG2 were noted in cells treated with CDDP. At higher drug concentrations, the distribution of UBF also changed, from a clustered appearance associated with the nucleoli to more diffuse nuclear staining. These results demonstrate that HMG1/HMG2 and UBF respond to drug treatment, presumably by recognizing cis-Pt-DNA adduct formation in intact cells. Hence, these proteins may play an important role in directing the response of tumor cells following exposure to CDDP.

Antineoplastic Agents↗

Modulating the adjuvanticity of alum by co-administration of muramyl di-peptide (MDP) or Quil-A.

The characterization of the immunological cascades of the innate immune system activated by pathogen associated molecular patterns (PAMP) recognized by pattern recognition receptors (PRR) have allowed the elucidation of the mechanisms underlying the immunomodulatory properties of adjuvants. Thus, the combinatorial use of adjuvants with specific, complementary functions is investigated to achieve tailored immune responses to subunit vaccines. We have previously shown how combinatorial administration of chitosan and cholera toxin B or muramyl-di-peptide (MDP) intranasally, but not intramuscularly, can allow small doses of MDP which, when administered alone cannot adjuvantise Helicobacter pylori urease (rUre), achieve an immunomodulatory effect through the specific physiological effect of chitosan. The aim of this study was to investigate if in the context of rUre the adjuvantising effect of MDP could be realized via the intramuscular route by combination with aluminium hydroxide, as compared with the routinely used veterinary adjuvant combination of alum and Quil-A. Serum IgG kinetics were comparable between the two adjuvant combination groups. However, the alum + MDP combination afforded higher antigen-specific recall responses in splenocyte cultures, associated with elevated release of the type I immune response cytokines IFN-gamma and IL-2. This data suggests that the adjuvanticity of MDP can be modulated in the context of alum in a manner dissimilar to that of Quil-A, achieving a balancing effect on the responses elicited by alum adjuvantisation.

Acetylmuramyl-Alanyl-Isoglutamine↗

Making sense of olfaction through predictions of the 3-D structure and function of olfactory receptors.

We used the MembStruk first principles computational technique to predict the three-dimensional (3-D) structure of six mouse olfactory receptors (S6, S18, S19, S25, S46 and S50) for which experimental odorant recognition profiles are available for a set of 24 odorants (4-9 carbons aliphatic alcohols, acids, bromo-acids and diacids). We used the HierDock method to scan each predicted OR structure for potential odorant binding site(s) and to calculate binding energies of each odorant in these binding sites. The calculated binding affinity profiles are in good agreement with experimental activation profiles, validating the predicted 3-D structures and the predicted binding sites. For each of the six ORs, the binding site is located between trans-membrane domains (TMs) 3-6, with contributions from extracellular loops 2 and 3. In particular, we find six residue positions in TM3 and TM6 to be consistently involved in the binding modes of the odorants. Indeed, the differences in the experimental recognition profiles can be explained on the basis of these critical residues alone. These predictions are also consistent with mutation data on ligand binding for catecholamine receptors and sequence hypervariability studies for ORs. Based on this analysis, we defined amino acid patterns associated with the recognition of short aliphatic alcohols and mono-acids. Using these two sequence fingerprints to probe the alignment of 869 OR sequences from the mouse genome, we identified 34 OR sequences matching the fingerprint for aliphatic mono-acids and 36 corresponding to the recognition pattern for aliphatic alcohols. We suggest that these two sets of ORs might function as basic arrays for uniquely recognizing aliphatic alcohols and acids. We screened a library of 89 additional molecules against the six ORs and found that this set of ORs is likely to respond to aldehydes and esters with longer carbon chains than their currently known agonists. We also find that compounds associated with the flavor in foods are often among the best calculated binding affinities. This suggests that physiologic ligands for these ORs may be found among aldehydes and esters associated with flavor.

Acids↗

Platelet-activating factor receptor and innate immunity: uptake of gram-positive bacterial cell wall into host cells and cell-specific pathophysiology.

The current model of innate immune recognition of Gram-positive bacteria suggests that the bacterial cell wall interacts with host recognition proteins such as TLRs and Nod proteins. We describe an additional recognition system mediated by the platelet-activating factor receptor (PAFr) and directed to the pathogen-associated molecular pattern phosphorylcholine that results in the uptake of bacterial components into host cells. Intravascular choline-containing cell walls bound to endothelial cells and caused rapid lethality in wild-type, Tlr2(-/-), and Nod2(-/-) mice but not in Pafr(-/-) mice. The cell wall exited the vasculature into the heart and brain, accumulating within endothelial cells, cardiomyocytes, and neurons in a PAFr-dependent way. Physiological consequences of the cell wall/PAFr interaction were cell specific, being noninflammatory in endothelial cells and neurons but causing a rapid loss of cardiomyocyte contractility that contributed to death. Thus, PAFr shepherds phosphorylcholine-containing bacterial components such as the cell wall into host cells from where the response ranges from quiescence to severe pathophysiology.

Animals↗

Cardiac patients' conversations and the process of establishing meaning.

The purpose of this study was to describe and analyze the naturally occurring conversations of hospitalized cardiac patients. According to Blumer's symbolic interactionist perspective, individual interpretation or the meaning of a stressful event is developed and shared through social interaction. The meaning of an event is the foundation for behavioral responses that can promote or impede recovery. This study analyzed the naturally occurring conversations of ten cardiac patients. Three themes were identified within these conversations. The first theme, labeled finding cause, incorporated the processes of structuring the illness event, determining a cause for the event, and sharing the story of the illness with someone. The second theme, labeled acting normally, included participants attempting to preserve their normal patterns or habits, to resume normal activities, and to maintain personal control. The third theme, labeled passing time, encompassed sequencing the experiences within the illness event and hospitalization, waiting for news about their condition and/or recovery and structuring their future following recovery from the acute illness. An analysis of naturally occurring conversation can expedite recognition of the processes cardiac patients use to structure their reality and determine the meaning of an illness event. This may provide a foundation for understanding behaviors that affect physiological and psychosocial recovery.

Adolescent↗

Transthyretin (prealbumin) in health and disease: nutritional implications.

The name "transthyretin" reflects the dual physiological roles of this tetrameric unglycosylated plasma protein. TTR is one of three specific carrier proteins involved in the transport of both thyroid hormones and of retinol through the mediation of RBP. TTR is a product of the visceral compartment, and its hepatic synthesis is exquisititely sensitive to both the adequacy and levels of protein and energy intakes--hence the proposal of TTR as a nutritional marker. To date, 38 TTR variants have been described, most of which are associated with variable degrees of cardiac and/or neural tissue amyloid deposits. All known variants arise from a single AA substitution due to single point mutation in the coding region of the TTR gene. Under acute stress conditions, the synthesis of TTR, RBP, and CBG is abruptly depressed by a cytokine-directed orchestration of new metabolic priorities, with a redistribution of organ and tissue protein pools. It is proposed that TTR, RBP, and CBG behave as acute-booster reactants (ABRs), actively participating in the cascade of metabolic events characterizing the stress reaction along pathways best explained by the free hormone/vitamin hypothesis. The latter is governed by the law of mass action--the spontaneous dissociation and instant uptake by hepatocytes of the ligands freed from their specific carrier proteins, which creates a transient hyperthyroid, hyperretinoid, and hypercortisolic climate. This response generally does not exceed four or five days because the initial impact of injury normally subsides, but it may last longer if complications occur. The magnitude and adequacy of the stress responses depend on the preceding nutritional status as assessed by TTR plasma levels and are proportionate to the severity of insult. Clinical, animal, and molecular studies concur to demonstrate the dualistic stimulatory or inhibitory effects triggered by the ligands, whose unmetabolized fractions are excreted in the urinary output. Thyroid hormones and retinoids appear to control the early maturation processes and the synthesis of primary transcripts, whereas cortisol preferentially modulates the secondary responses and confers a protective effect on healthy tissues. During acute stress, the evolutionary patterns of visceral proteins and inflammatory markers exhibit compulsory mirror images. However, they change in independent ways under more chronic circumstances. A relatively simple biochemical micromethod based on the simultaneous measurement of plasma TTR, albumin, CRP, and orosomucoid aggregated into a PINI is proposed for the early recognition and follow-up of both nutritional and inflammatory facets of the disease spectrum.

Amino Acid Sequence↗

Gustatory neuron types in the periphery: a functional perspective.

Robert P. Erickson's research and writings formed the intellectual backdrop and guiding force for much of the major research on sensory coding in taste. As articulated best by Erickson, consideration focused on the relative merits of labeled-line and across-fiber pattern theory. The present article focuses primarily on a review of the electrophysiological and behavioral studies on salt taste and salt taste-mediated behavior in rodents. The evidence clearly shows that the peripheral gustatory system consists of a few neuron types/groups with well-defined physiological response characteristics. Electrophysiological studies of the chorda tympani nerve define a physiological group of narrowly tuned neurons selectively responsive to NaCl stimuli. It appears that this is a sodium-sensing module that functions primarily in the detection, recognition, and ingestion of NaCl.

Animals↗

Lateralized changes in tympanic membrane temperature in relation to different cognitive tasks in chimpanzees (Pan troglodytes).

Lateralized changes in tympanic membrane (TM) temperature were assessed in chimpanzees. Subjects were engaged in 1 of 3 different cognitive tasks, including matching-to-sample, visual-spatial discrimination, and a motor task. During execution of each task, TM temperatures were taken from each ear over a 20-min time period. The TM temperatures at each time interval were subtracted from a baseline measure to assess relative change in blood flow. For the matching-to-sample and visual-spatial discrimination tasks, significant lateralized changes in TM temperature were found, with left-ear temperature increasing and right-ear temperature decreasing. No laterality effects were found for the motor or control tasks. These data provide the first evidence of laterality in physiological functioning in chimpanzees and suggest that transient asymmetries in cognitive functions are associated with changes in cerebral blood flow as assessed by TM temperature change.

Animals↗

Precision grip function after hand replantation and digital nerve injury.

Understanding how the loss of digital sensibility affects manual dexterity could have important implications for rehabilitation after hand injury. We investigated precision grip function during lifting tasks in seven patients after hand replantation, in five after single digital nerve injury and in four volunteers subjected to digital anaesthesia. Using their affected hand, all participants could successfully lift test objects with parallel and vertical grip surfaces and they all reliably increased the grip force with increasing object weight (0.11-0.55 kg). However, the grip forces used were frequently significantly higher than those applied by the unaffected hand. This was partly due to participants compensating for loss of sensibility with high grip force safety margins against slips, and partly related to misalignments of the fingertips on the grasp surfaces. The latter was most prominent after hand replantation. In a second series of lifting experiments we changed the shape of the grip surfaces in order to investigate the participants' ability to adapt grip forces based on tactile recognition of object shape. An important finding from this series was that in patients with poor clinical outcomes, the contralateral unaffected hand tended to mirror the abnormal grasp patterns of the injured hand. This suggests that control strategies developed for the impaired hand can influence the control of the contralateral uninjured hand.

Adaptation, Physiological↗