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At least 793 records · Page 44Linked to original sources
PubMed2006

Use of microchip-based hydrodynamic focusing to measure the deformation-induced release of ATP from erythrocytes.

In order to understand the role that erythrocytes play in conditions such as pulmonary hypertension, in vitro mimics of the microcirculation are needed. This paper describes the use of microchip-based hydrodynamic focusing to develop a mimic that allows both mechanical deformation of erythrocytes and quantification of the adenosine triphosphate (ATP) that is subsequently released in response to this deformation. In this mimic, two sheathing streams of a luciferin/luciferase mixture are used to focus and deform a central fluid flow of an erythrocyte sample. The focusing width is changed by simply manipulating the sheath flow rate. This allows a variety of cross-sectional areas to be studied using single point chemiluminescent detection. It was shown that increasing the sheath flow rate does result in elevated levels of ATP release. For example, one sample of rabbit erythrocytes released 0.80 (+/- 0.13) microM ATP when focused to a cross-section of 3480 microm(2), while focusing the same sample to a smaller cross-section (1160 microm(2)) led to a release of 6.43 (+/- 0.40) microM ATP. In addition, two different inhibitors, diamide and glibenclamide, were used to ensure a lack of cell lysis. This approach can be used to examine a wide range of deformation forces in a high throughput fashion and will be of interest to researchers studying the mechanisms leading to vasodilation in the microvasculature.

Adenosine Triphosphate↗
PubMed2006

Rapid electrophoretic separations in short capillaries using contactless conductivity detection and a sequential injection analysis manifold for hydrodynamic sample loading.

A sequential injection-capillary electrophoresis (SI-CE) system for the fast and automated quantitative analysis of anions and cations is described. Because of the low sample load in capillary electrophoresis a split injection approach had to be used to achieve reliable hydrodynamic injection. The use of a capillary of 8 cm effective length allowed for the separation of five inorganic cations within 11 s. One common electrolyte solution containing 12 mM l-histidine and 2 mM 18-crown-6 whose pH value was adjusted to 4.0 with 10% v/v acetic acid was used for anions and cations, thus the analysis of both groups of analytes could be carried out in rapid sequence simply by switching the polarity of the high voltage supply. The system also allows automated flushing of the capillary. Detection limits between about 2 and 5 micromol l(-1) could be achieved with the contactless conductivity detector employed.

Journal Article↗
PubMed2006

Effect of lobe pumping on human albumin: development of a lobe pump simulator using smoothed particle hydrodynamics.

Using SPH (smoothed particle hydrodynamics), the motion of a lobe pump under load was simulated in order to predict the level of shear stress experienced by a protein solution. By varying the gap size between the lobes and pump housing, variations in pump efficiency and shear stress were determined. The simulations indicated that pump shear was dependent on gap size, with shear stress levels (0-40 Pa) correlating with those estimated in previous albumin-pumping studies. As gap size increased, the number of fluid particles experiencing low shear (<10 Pa) increased, whereas those experiencing high shear (>20 Pa) showed a decreasing trend. The pump efficiency, however, decreased with gap size, requiring more lobe revolutions to pass a unit volume. Taken together, these observations indicate that lobe pumps operated with increased gaps between the rotors and the housing result in larger number of particles within the fluid experiencing shear stresses. Moreover, the simulations indicate that it is best to use larger lobe pumps operated at high efficiency to transfer protein-containing solutions.

Albumins↗
PubMed1975

Hydrodynamic changes accompanying the loss of metal ions from concanavalin A.

The hydrodynamic changes which accompany the dissociation of metal ions, from concanavalin A at acid pH are a result of charge effects rather than of dissociation of metal ions as such. Measurements of the rotational relaxation time are discussed in terms of the hydration of the protein and its polymeric heterogeneity.

Acetates↗
PubMed1985

Molecular modelling of human complement subcomponent C1q and its complex with C1r2C1s2 derived from neutron-scattering curves and hydrodynamic properties.

Models for the structures of subcomponent C1q of first component C1 of human complement and its complex with subunit C1r2C1s2 are compared with experimental neutron-scattering curves. The length of the C1q collagenous arm is closer to 14.5 nm than to 11.5 nm proposed from electron microscopy, and this is consistent with the primary sequence of C1q. The mean C1q base-arm angle is 40-45 degrees and C1q is found to be flexible: the base-arm angle can vary up to 30 degrees from equilibrium at any moment. The complex of C1r2C1s2 and C1q requires a large shape change in C1r2C1s2. Ring-like models for C1r2C1s2 are not as successful at rationalizing the scattering data as are models that involve C1r2C1s2 binding to one side of C1q. Hydrodynamic calculations of the sedimentation coefficients for C1q and C1 are generally consistent with these neutron models.

Complement Activating Enzymes↗
PubMed1987

Hydrodynamic properties of adenosine Ri receptors solubilized from rat cerebral-cortical membranes.

Adenosine Ri receptors and inhibitory guanine-nucleotide-regulatory components were solubilized from rat cerebral-cortical membranes with sodium cholate. (-)-N6-Phenylisopropyl[2,8-3H]adenosine [( 3H]PIA) binds with high affinity to the soluble receptors, which retain the pharmacological specificity of adenosine Ri receptors observed in membranes. The binding is regulated by bivalent cations and guanine nucleotides. Bivalent cations increase [3H]PIA binding by increasing both the affinity and the apparent number of receptors. Guanine nucleotides decrease agonist binding by increasing the dissociation of the ligand-receptor complex. Adenosine agonists stabilize the high-affinity form of the soluble receptor. The hydrodynamic properties of the adenosine receptor were determined with cholate extracts of membranes that were treated with [3H]PIA. Sucrose-gradient-centrifugation analysis indicates that the receptor has a sedimentation coefficient of 7.7 S. The receptor is eluted from Sepharose 6B columns with an apparent Stokes radius of 7.2 nm. Labelling of either sucrose-gradient or gel-filtration-column fractions with pertussis toxin and [32P]-NAD+ reveals that both the 41,000- and 39,000-Mr substrates overlap with the receptor activity. These studies suggest that the high-affinity adenosine-receptor-binding activity in the cholate extract represents a stable R1-N complex.

Adenosine↗
PubMed1989

Chemical and hydrodynamic characterization of the human leucocyte receptor for complement subcomponent C1q.

A procedure for preparation of the receptor for complement subcomponent Clq from human tonsil lymphocytes and the monocytic cell line U937 was developed. The procedure is suitable for isolation of several hundred micrograms of the receptor, Clq-R, and has yielded sufficient material for chemical and hydrodynamic characterization. Clq-R from tonsil lymphocytes behaves identically with that from U937 cells. Clq-R has a monomer Mr of 56,000, and is an acidic glycoprotein containing about 17% carbohydrate. The polypeptide chain length is estimated to be 416-448 amino acid residues, with two or three sites for N-linked glycosylation. Detergent-solubilized Clq-R exists as an elongated dimer (f/fo = 1.8), and does not bind a significant weight of detergent. The radioiodinated isolated receptor binds specifically and saturably to solid-phase Clq, but not to collagen, IgG, bovine serum albumin or complement component C3.

Carrier Proteins↗
PubMed1990

Hydrodynamic properties of the angiotensin II receptor from bovine adrenal zona glomerulosa.

The bovine adrenal angiotensin II receptor was solubilized with the non-ionic detergent octyl beta-D-glucoside following its binding with the high-affinity antagonist 125I-labelled [Sar1,Ile8]angiotensin II. The complex was sufficiently stable to allow the determination of its hydrodynamic properties. The solubilized receptor migrated on a Superose 6 column as a single peak with a Stokes radius of 5.29 nm. Comparison of sedimentation behaviour through a sucrose density gradient in H2O and 2H2O lead to a partial specific volume of 0.751 ml/g and a sedimentation coefficient (S20,w) of 5.17 S. Combination of gel filtration and sedimentation data indicated that the labelled protein-detergent complex has an Mr of 124,000 and a frictional ratio of 1.42. The Mr of the angiotensin II receptor was estimated as 104,000 kDa after correction for the bound detergent. Photoaffinity cross-linking of 125I-[Sar1, (4-N3)Phe8]angiotension II with bovine adrenal membrane receptor followed by SDS/PAGE under reducing and non-reducing conditions yielded a broad band of Mr 54,000. This suggests that the angiotensin II receptor is a non-covalent dimer in which the two subunits have a similar Mr.

Affinity Labels↗
PubMed1993

Non-electrostatic factors govern the hydrodynamic properties of articular cartilage proteoglycan.

The hydrodynamic frictional resistance to water flow exerted by articular cartilage proteoglycan is shown to be similar to that of proteoglycan isolated from Swarm rat chondrosarcoma, and independent of the state of aggregation of the proteoglycan. Frictional resistance is dependent, however, on the chain segments of the constituent chondroitin-sulphate and keratan-sulphate chains of the proteoglycan. Frictional resistance offered by chondroitin sulphate was independent of pH over the range 3.2-8.7. This confirms previous studies, associated with varying ionic strength and chemical modification of ionic groups of chondroitin sulphate, which showed that the frictional resistance offered by this molecule is independent of electrostatic factors. Water-structure-breaking and hydrogen-bond-breaking solvents were also without major effects on the flow resistance offered by chondroitin sulphate. An overall secondary structure of chondroitin sulphate was not evident, as it showed no significant difference to dextran in terms of its temperature dependence of relative viscosity. Local regions of rigid secondary structure, as manifested through inter-residue hydrogen bonding between sugar residues, is likely to control flow resistance as periodate-oxidized chondroitin sulphate and periodate-oxidized and reduced preparations showed a significant decrease in their frictional resistance to water.

Animals↗
PubMed1994

Hydrodynamic and pharmacological characterization of putative alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid/kainate-sensitive L-glutamate receptors solubilized from pig brain.

L-[3H]Glutamate binding sites with characteristics resembling that of membrane-bound alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA)/kainate-subtype L-glutamate receptors have been solubilized from pig brain synaptic junctions by Triton X-114. Binding of [3H]AMPA to these soluble sites in the presence of KSCN results in a curvilinear Scatchard plot that can be resolved into a high-affinity component and a low-affinity component. These Triton-X-114-solubilized sites can be further separated into two species of binding sites by gel-filtration chromatography or sucrose-density-gradient centrifugation. The pharmacological profiles of these two species of binding site are almost identical, and the rank orders of potency for glutamatergic drugs in displacing L-[3H]glutamate binding to these sites are quisqualate > 6,7-dinitroquinoxaline-2,3-dione > 6-cyano-7-nitroquinoxaline-2,3-dione > AMPA > L-glutamate > kainate >> N-methyl-D-aspartate = L-2-amino-4-phosphonobutyrate. Both sites are found to bind [3H]AMPA, and in the presence of KSCN the binding activities are significantly enhanced. Analysis of the hydrodynamic behaviour of these binding sites by sucrose-density-gradient centrifugation in H2O- and 2H2O-based solvents and gel-filtration chromatography has revealed that one of these sites (Stokes radius 8.3 nm, sedimentation coefficient 18.5 S) consists of 562 kDa protein and 281 kDa detergent, and the other site (Stokes radius 9.6 nm, sedimentation coefficient 13.4 S) consists of 352 kDa protein and 569 kDa detergent. Frictional coefficients of these sites indicate that these receptor-detergent complexes are asymmetrical in structure, consistent with large transmembrane proteins.

Animals↗
PubMed1999

A sealless centrifugal blood pump with passive magnetic and hydrodynamic bearings.

We are developing a permanently implantable ventricular assist system based on a sealless centrifugal blood pump. The impeller of the pump is supported by a passive radial magnetic bearing acting in synergy with hydrodynamic bearings. Torque is transmitted to the impeller by electromagnetic coupling via an integrated axial flux gap motor. Computer modeling has been used extensively to guide the hydraulic and electromagnetic design of the pump. As part of the development effort, a prototype system was built, which consisted of a radial magnetic bearing, an axial air gap motor, and a pivot bearing to constrain the axial motion. The following testing has been completed to validate the design. First, hydraulic tests have demonstrated sufficient hydraulic performance. Second, preliminary in vitro evaluation of hemolysis was low compared to that of a BioPump control. Third, a 6 h in vivo experiment was successfully completed.

Animals↗
PubMed2000

Hydrodynamic evaluation of three artificial aortic valve chambers.

The effect of chamber geometry on the characteristics of turbulent steady flow through a newly designed artificial heart valve, "the jellyfish valve," has been investigated for flow rates matching those of peak systole. Laser Doppler Anemometry (LDA) was employed to determine the velocity and shear stress distributions at various locations downstream of the jellyfish valve. Three geometrically different aortic valve chambers have been investigated: namely, a chamber with sinuses of Valsalva, an ellipsoidal chamber, and a cylindrical chamber. The results of this investigation indicated that the aorta with sinuses of Valsalva model had the highest turbulent shear stresses whereas the ellipsoidal model gave the highest-pressure drops. However, for the various flow rates examined, including the systole peak value of 26 L/min, it appears that the ellipsoidal model displays better hydrodynamic characteristics in terms of shear stress and uniformity of axial velocity distributions downstream of the jellyfish valve.

Aortic Valve↗
PubMed2000

VentrAssist hydrodynamically suspended, open, centrifugal blood pump.

A novel design is presented for an implantable centrifugal blood pump in which hydrodynamic forces acting on tapered edges of thick blades are used to suspend the impeller. The pump has no shaft, seals, or "spiders" and has clean flow lines with no stagnant zones. At 5 L/min and 100 mm Hg differential pressure, the measured hemolysis was in the range NIH 0.002-.005 g/100 L and the system efficiency was 19%.

Animals↗
PubMed2000

Computational fluid dynamics analysis of hydrodynamic bearings of the VentrAssist rotary blood pump.

The computational fluid dynamics (CFD) package CFX-TASCflow was applied to simulate the flows through the blood pump hydrodynamic bearings. The three-dimensional flow patterns through the bearings were predicted and the hydraulic performance analyzed. The computations were carried out at 3 axial positions of the pump impeller. Net lift force away from the nearer part of the housing increased when the impeller moved closer to this part. Radial force and drag force were also found. Separated flows were observed at the leading and trailing edge of the bearing gap. To test the CFD package, a series of two-dimensional computations were also carried out for various bearing geometries. The results were compared with published experimental data.

Equipment Design↗
PubMed2001

Computational fluid dynamics performance prediction for the hydrodynamic bearings of the ventrassist rotary blood pump.

Finite-volume computations are described for laminar flow in the hydrodynamic bearings supporting 2 different versions of the impeller of the VentrAssist rotary pump. Pressure boundary conditions are taken from prior computations of turbulent flow in the whole pump with frictionless sliding of the impeller on the inside of the pump body. By investigating various impeller positions, the true ride height is determined. Net lift and combined drag from all 8 bearings of the 4-bladed impeller are compared with predictions based on 2-D theory. The computations also reveal the extent of net force and moment acting to move the impeller away from its nominal axis of rotation.

Computational Biology↗
PubMed1998

[Percutaneous therapy of occlusions of calf arteries with newly developed hydrodynamic thrombectomy catheter, Angiojet LF140].

PURPOSE: To evaluate the rheolytic thrombectomy catheter Angiojet LF140 (RTC) for treatment of calf artery occlusions. PATIENT AND METHOD: A 47-year-old male patient with an 8 cm measuring occlusion of the femoropopliteal and all calf vessels, suffering from limb threatening ischemia for 21 days, was treated with hydrodynamic thrombectomy (RT) using the modified RTC LF140. RESULTS: Most of the occluded segments could be successfully recanalized with the RTC. 450 ml of heparinized saline were injected. Parts of the tibial posterior artery and the fibular artery remained occluded. Additional long-term fibrinolysis therapy was administered (24 h), until all lower limb arteries were completely recanalized (+3 according to Rutherford). CONCLUSION: The modified RTK LF140 allows the treatment of acute thrombotic occlusions, even small caliber vessels. The device fails to remove organized and walladherent thrombus.

Catheterization↗
PubMed2002

From atomistic lattice-gas models for surface reactions to hydrodynamic reaction-diffusion equations.

Atomistic lattice-gas models for surface reactions can accurately describe spatial correlations and ordering in chemisorbed layers due to adspecies interactions or due to limited mobility of some adspecies. The primary challenge in such modeling is to describe spatiotemporal behavior in the physically relevant "hydrodynamic" regime of rapid diffusion of (at least some) reactant adspecies. For such models, we discuss the development of exact reaction-diffusion equations (RDEs) describing mesoscale spatial pattern formation in surface reactions. Formulation and implementation of these RDEs requires detailed analysis of chemical diffusion in mixed reactant adlayers, as well as development of novel hybrid and parallel simulation techniques. (c) 2002 American Institute of Physics.

Journal Article↗
PubMed2004

A new method for solving the quantum hydrodynamic equations of motion: application to two-dimensional reactive scattering.

The de Broglie-Bohm hydrodynamic equations of motion are solved using a meshless method based on a moving least squares approach and an arbitrary Lagrangian-Eulerian frame of reference. A regridding algorithm adds and deletes computational points as needed in order to maintain a uniform interparticle spacing, and unitary time evolution is obtained by propagating the wave packet using averaged fields. The numerical instabilities associated with the formation of nodes in the reflected portion of the wave packet are avoided by adding artificial viscosity to the equations of motion. The methodology is applied to a two-dimensional model collinear reaction with an activation barrier. Reaction probabilities are computed as a function of both time and energy, and are in excellent agreement with those based on the quantum trajectory method.

Journal Article↗