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PubMed2005

Segregation and persistence of form in the lateral occipital complex.

While the lateral occipital complex (LOC) has been shown to be implicated in object recognition, it is unclear whether this brain area is responsive to low-level stimulus-driven features or high-level representational processes. We used scrambled shape-from-motion displays to disambiguate the presence of contours from figure-ground segregation and to measure the strength of the binding process for shapes without contours. We found persisting brain activation in the LOC for scrambled displays after the motion stopped indicating that this brain area subserves and maintains figure-ground segregation processes, a low-level function in the object processing hierarchy. In our second experiment, we found that the figure-ground segregation process has some form of spatial constancy indicating top-down influences. The persisting activation after the motion stops suggests an intermediate role in object recognition processes for this brain area and might provide further evidence for the idea that the lateral occipital complex subserves mnemonic functions mediating between iconic and short-term memory.

Adult↗
PubMed2004

Escherichia coli R-factors unstable in Salmonella typhi are deleted before being segregated in this host.

Although resistant Salmonella typhi strains are found in the environment, many epidemiological data indicate that most isolates are multisensitive. Plasmids are not common in S. typhi, contrasting with other enterobacteria. Since S. typhi is able to receive R plasmids from other enterobacteria, such plasmidless condition may be due to destabilization of the plasmids acquired. The segregation process of three plasmids known to behave unstably in S. typhi strains was analyzed, and evidence was obtained that the three of them lost an antibiotic-resistance determinant due to small deletions before plasmid loss occurred. Once deleted, the plasmids entered a segregation phase with particular kinetic features in each case. Selective pressure prevented plasmid deletion and segregation. Like their parental plasmids, the deleted plasmids were unstable in S. typhi but stable in Escherichia coli, suggesting that deletions imply loss of genetic information relevant for a plasmid stability mechanism operative in S. typhi, but not in E. coli.

Anti-Bacterial Agents↗
PubMed2007

Mixture segregation by an inertial cavitation bubble.

Pressure diffusion is a mass diffusion process forced by pressure gradients. It has the ability to segregate two species of a mixture, driving the densest species toward high pressure zones, but requires very large pressure gradients to become noticeable. An inertial cavitation bubble develops large pressure gradients in its vicinity, especially as the bubble rebounds at the end of its collapse, and it is therefore expected that a liquid mixture surrounding such a bubble would become segregated. Theory developed in an earlier paper shows that this is indeed the case for sufficiently large molecules or nano-particles. The main theoretical results are recalled and a possible implication of this segregation phenomenon on the well-known cavitation-enhanced crystals nucleation is proposed.

Computer Simulation↗
PubMed2004

Texture segregation by motion under low luminance levels.

We examined the effect of average luminance level on texture segregation by motion. We determined the minimum presentation duration required for subjects to detect a target defined by motion direction against a moving background. The average luminance level and retinal position of the target were systematically varied. We found that the minimum presentation duration needed for texture segregation depends significantly on the average luminance level and on retinal position. The minimum presentation duration increased as the mean luminance decreased. At a very low (presumably scotopic) luminance level, the motion-defined target was never detected rapidly. Under scotopic conditions, the minimum presentation duration was shorter in the periphery than in a near foveal region when the task was simple detection of the target. When the task included identifying the shape of the target patch, however, the target presented near the fovea was identified faster at all luminance levels. These results suggest that the performance of texture segregation is constrained by the spatiotemporal characteristics of the early visual system.

Adult↗
PubMed2006

Texture segregation on the basis of contrast polarity of odd-symmetric filters.

This is the first study to demonstrate the selectivity of learning for contrast polarity. The finding is the main result of an investigation into the existence of central and peripheral vision mechanisms selective for contrast polarity within the texture-segregation process, using the perceptual learning paradigm in a detection task. Energy models (Malik & Perona, 1990) exclude segregation of textures composed of elements of odd-symmetric luminance profile by contrast polarity differences. Here the target was a Gabor patch (0.8 deg) of 1 cyc/deg in sine phase (odd-symmetry) embedded in a background of mirror-image elements. Our results showed that, in fovea, segregation on the basis of contrast polarity was above threshold from the first session. After learning, the target popped-out in both central and peripheral vision for durations over 10 ms. Our major result is that learning is selective for contrast polarity; it is also selective for orientation and position, all characteristics distinctive of early processing. Since the learning effects were obtained with texture composed of odd-symmetric mirror-image elements, they indicate that the output from odd-symmetric filters was not excluded or inhibited in texture segmentation, but instead played an active role. Our data support models of texture segmentation, in which detection of texture gradient is achieved on the basis of early cortical process, before the non-linear transformation of their output.

Adult↗
PubMed2004

A p53-independent pathway regulates nucleolar segregation and antigen translocation in response to DNA damage induced by UV irradiation.

The nucleolus is the site of ribosomal gene transcription, processing of rRNA transcripts and maturation of preribosomal particles. Recent studies have shown that nucleoli are also involved in processes as diverse as aging, proliferation control, stress response and mitotic regulation. The proliferation-dependent nucleolar antigen pKi-67 is a sensitive marker of both proliferative activity and nucleolar integrity. We show that staining for the nucleolar-associated antigen pKi-67 is lost from nucleoli during growth arrest following UV irradiation. Surprisingly, before cells enter growth arrest, Ki-67 staining translocates from nucleolar to nucleoplasmic sites within 4-6 h of irradiation. Ki-67 redistribution is accompanied by segregation of nucleolar components. The timing of p53 response correlates well with pKi-67 translocation, growth arrest and restoration of proliferation. However, nucleolar segregation and pKi-67 translocation occur in the absence of functional p53 and other components of damage response pathways (DNA-PK, CSA, CSB, XPA, XPC, ATM ATR, p38(MAPK) and MEK1). Neither gamma-irradiation nor H(2)O(2) treatment causes pKi-67 translocation or loss of nucleolar integrity. In marked contrast, treatment of cells with UV-mimetic 4-NQO does induce nucleolar disruption and relocalisation of pKi-67, suggesting that bulky adduct formation in rDNA rather than strand breaks is sufficient to cause nucleolar segregation. Our data reveal a previously unrecognized cellular response to genotoxic stress and may reveal novel pathways leading to growth arrest.

4-Nitroquinoline-1-oxide↗
PubMed1996

Familial segregation in the occurrence and severity of periampullary neoplasms in familial adenomatous polyposis.

BACKGROUND: Familial adenomatous polyposis (FAP) patients often develop periampullary adenomas that may progress to periampullary cancer, a common cause of death in this population. The risk of periampullary cancer in FAP is unclear, and variables that predict the occurrence and severity of periampullary tumors are not well understood. The specific aim of this study was to determine whether the risk of periampullary neoplasia segregates in specific FAP families. MATERIALS AND METHODS: A total of 144 FAP patients from 74 families were either screened by gastroduodenoscopy (n = 132) or information was obtained from surgical or autopsy reports (n = 12). The severity of periampullary neoplasia was recorded for each patient and graded based on maximum polyp size and histology. Linear regression was used to determine the significance of a number of variables with respect to periampullary neoplasia. A blood sample was available from at least one member of 50 unrelated families and used to detect germline mutations in codons 686 through 1693 of the adenomatous polyposis coli (APC) gene. RESULTS: Statistically significant familial segregation was found for the incidence and severity of periampullary neoplasia (P < 0.02). Age was also a statistically significant variable (P < 0.01). No correlation was observed between specific APC germline mutations and periampullary polyp frequency and severity. CONCLUSIONS: The occurrence and severity of periampullary neoplasms in patients with FAP segregates in families. This familial association may be related to as yet unidentified modifier genes or perhaps common environmental factors. These results should prove useful in developing upper gastrointestinal screening protocols for FAP patients at risk for periampullary neoplasia.

Adenoma↗
PubMed2002

Auditory stream segregation in Japanese monkeys.

Japanese monkeys were examined to determine whether they perceptually segregate tone sequences. Monkeys were required to discriminate two sequences of tones (target sequences) differing in frequency contours. Distractor sequences were presented simultaneously with the target sequences. Monkeys could discriminate the sequences when the frequency ranges of the target and distractor sequences did not overlap, but they could not when the ranges overlapped. Subsequent probe tests confirmed that the discrimination depended on cues other than the local pitch of the component tones regardless of the presence of the distractor sequence. The results suggest that monkeys segregate tone sequences based on frequency proximity, and they perceive global characters of the segregated streams.

Animals↗
PubMed2001

Association of plasma bilirubin with coronary heart disease and segregation of bilirubin as a major gene trait: the NHLBI family heart study.

Decreased serum bilirubin levels have been associated with coronary heart disease (CHD). It is believed that bilirubin acts as an antioxidant, preventing formation of oxidized LDL and subsequent atherosclerosis. Serum bilirubin also segregates as a major gene, with the rarer genotype associated with elevated bilirubin levels and occurring in about 12% of the population. Using a large population-based study of random and CHD high risk families, this analysis was designed to replicate the association of lower serum bilirubin levels with early CHD (onset by age 55 for males and 65 for females) using 328 case/control samples and the major gene segregation of bilirubin levels in 555 families. There were significant differences in plasma bilirubin levels between 188 males (12.5 micromol/l) and 140 females (9.3 micromol/l, P<0.0001). Higher serum albumin and lower HDL-C significantly correlated with higher plasma bilirubin levels in females but not males. In sex-specific logistic regression models of early CHD (148 cases and 180 controls), lower plasma bilirubin was associated with increased prevalence of CHD in males with borderline significance (odds ratio=0.93 for a 1 micromol/l increase in bilirubin, P=0.056) but not in females. Bilirubin was found to segregate as a major gene using all 555 families consisting of 1292 individuals, with estimates replicating those in the previously published study. The most parsimonious model was a recessive model for high bilirubin levels that occurred in about 23% of the population. The means were separated by 1.7 standard deviations and there was a significant polygenic effect (h2=0.33, P=0.0009). We conclude that decreased bilirubin is mildly related to CHD in males but not in females. Because of an inverse correlation between HDL-C and bilirubin, the protective high HDL-C levels may have counteracted the CHD risk associated with lower bilirubin levels in females. The inferred major gene for bilirubin may protect against CHD, since elevated levels, rather than lower levels, were associated with this inferred gene.

Aged↗
PubMed1991

Familial and sporadic hyperinsulinism: histopathologic findings and segregation analysis support a single autosomal recessive disorder.

We evaluated the possible genetic contribution to hyperinsulinism in a series of patients seen during the past 15 years. Of 26 families, 5 (19%) had more than one child affected (multiplex family). There were no apparent differences between patients in the 5 multiplex and 21 simplex families, clinically, biochemically, or on histologic examination of the pancreatic specimens. The families studied had a total of 63 offspring; the 26 index patients had 37 siblings, 6 of whom were affected. After four patients with hyperinsulinism caused by adenoma were excluded from the study, segregation analysis was carried out to test the data for agreement with results expected if familial and isolated hyperinsulinism represented a single disease with recessive mode of inheritance and a segregation ratio of 0.25. Excellent agreement was found between the observed number of affected siblings (20) and the expected number (19.65), with a segregation ratio of 0.254. The results were consistent with the hypothesis that in most or all cases, hyperinsulinism is inherited as an autosomal recessive disease. There was no evidence of distinct familial and sporadic types.

Family Characteristics↗
PubMed1991

On the relation between the instability of ESS in discrete dynamics and segregation distortion.

There is a simple correspondence between discrete dynamical systems associated with evolutionary game dynamics and general locus multiallele selection models with non-Mendelian segregation. When interpreted properly the payoff matrix has two components, a fitness matrix component and a segregation matrix component. The presence of segregation distortion which corresponds to a non-symmetric payoff matrix, is a source of instability. With non-symmetric payoff an ESS does not usually correspond to a stable equilibrium. It is always externally stable but does not necessarily have an internally stable equilibrium.

Alleles↗
PubMed1992

Relationships between chromosome segregation, cell shape and temperature in Escherichia coli.

The partitioning of chromosomes into daughter cells during the division of Escherichia coli is non-random. As a result, the chromosome containing the older template DNA strand has a higher probability of segregating toward the old cell pole than toward the new cell pole. The numerical value of this probability is a function of the incubation temperature. It is shown here that a recent model for explaining the physiological basis for non-random chromosome segregation also explains the temperature dependence of the segregation process.

DNA Replication↗
PubMed1987

Bacterial DNA segregation: its motors and positional control.

A model for DNA segregation in bacteria is proposed which involves not merely growth of the cell membrane and wall, as previously assumed, but also the active movement of one of the two chromosome sister origins by a DNA helicase enzyme and of the chromosome termini and the bulk of the chromosomes by supercoiling tension exerted by DNA gyrase. This provides a unified mechanism for DNA chromosome movement in prosthecate budding bacteria as well as for bacteria that undergo binary fission. The positional control of DNA segregation and the plane of cell division depend, I suggest, on four things: (1) the attachment of the daughter chromosome termini to the cell wall in a position adjacent to the new cell poles at about the time of septation, (2) the displacement of the parental chromosome terminus from this attachment site by the mobile origin, which attaches itself instead to the wall at that point, (3) the movement of the chromosome terminus to a new location in between the daughter origins by the tension of supercoiling, and (4) the determination of the location of the future septum at the position occupied by the chromosome terminus at the time of septal initiation; septum-initiation proteins are postulated to achieve this by binding directly or indirectly to the chromosome terminus. This mechanism automatically ensures ordered DNA segregation in rapidly growing bacteria with more than two sister origins of replication.

Cell Division↗
PubMed1998

Dynamic balance of segregation distortion and selection maintains normal allele sizes at the myotonic dystrophy locus.

Myotonic dystrophy (DM), an autosomal dominant neurological disorder, is caused by CTG-repeat expansions at the DMPK locus, with affected individuals having > or = 50 repeats of this trinucleotide. Reduced reproductive fitness of affected individuals and decreased viability of congenital DM have been noted. Expanded CTG-repeat alleles are highly unstable, predominantly yielding even higher repeat sizes. Preferential transmission of longer alleles from heterozygous mothers within the normal size range of alleles also is observed. In view of these observations, it is worth examining how DM has been maintained in human populations for hundreds of generations. We present an analysis of the dynamic properties of a model of joint effects of segregation distortion and selection (intensity of which increases with allele sizes of an individual's genotype). Our mathematical formulation and numerical analyses demonstrate that a weak segregation distortion during female meiosis, together with selection of comparable intensity (within the normal allele size range), can maintain an equilibrium distribution of allele frequencies. Genetic drift, acting in conjunction with the occasional contraction of alleles by mutation, can contribute to the balance of segregation distortion and mutation, in the sense that even weaker selection can explain the observed allele frequencies. The model is applied to CTG-repeat size distributions at the DMPK locus, observed in normal individuals from world populations.

Alleles↗
PubMed2002

Segregation of vapor and gas in a sonoluminescing bubble.

Computer simulations of bubble oscillations in water are performed for various noble gases taking into account the segregation of water vapor and noble gas inside a collapsing bubble, which was predicted by Storey and Szeri [J. Fluid Mech. 396 (1999) 203]. It is clarified that the number of water vapor molecules dissociated inside a collapsing bubble is larger for heavier noble gases because of the lower thermal conductivity and the segregation of vapor and noble gas. It is also clarified that the temperature inside a helium bubble at the collapse increases considerably by the mixture segregation because a lesser amount of vapor is trapped inside a collapsing bubble. It is also clarified that multibubble sonoluminescence (MBSL) from heavier noble gases is brighter because of the lower ionization potential which results in the higher electron density and stronger plasma emissions.

Journal Article↗
PubMed2000

Continuity-based and discontinuity-based segmentation in transparent and spatially segregated global motion.

The mechanisms underlying the parsing of a spatial distribution of velocity vectors into two adjacent (spatially segregated) or overlapping (transparent) motion surfaces were examined using random dot kinematograms. Parsing might occur using either of two principles. Surfaces might be defined on the basis of similarity of motion vectors and then sharp perceptual boundaries drawn between different surfaces (continuity-based segmentation). Alternatively, detection of a high gradient of direction or speed separating the motion surfaces might drive the process (discontinuity-based segmentation). To establish which method is used, we examined the effect of blurring the motion direction gradient. In the case of a sharp direction gradient, each dot had one of two directions differing by 135 degrees. With a shallow gradient, most dots had one of two directions but the directions of the remainder spanned the range between one motion-defined surface and the other. In the spatial segregation case the gradient defined a central boundary separating two regions. In the transparent version the dots were randomly positioned. In both cases all dots moved with the same speed and existed for only two frames before being randomly replaced. The ability of observers to parse the motion distribution was measured in terms of their ability to discriminate the direction of one of the two surfaces. Performance was hardly affected by spreading the gradient over at least 25% of the dots (corresponding to a 1 degrees strip in the segregation case). We conclude that detection of sharp velocity gradients is not necessary for distinguishing different motion surfaces.

Discrimination, Psychological↗
PubMed2000

Correlates of figure-ground segregation in fMRI.

We investigated which correlates of figure-ground-segregation can be detected by means of functional magnetic resonance imaging (fMRI). Five subjects were scanned with a Siemens Vision 1.5 T system. Motion, colour, and luminance-defined checkerboards were presented with alternating control conditions containing one of the two features of the checkerboard. We find a segregation-specific activation in V1 for all subjects and all stimuli and conclude that neural mechanisms exist as early as in the primary visual cortex that are sensitive to figure-ground segregation.

Adult↗
PubMed2003

Segregation from direction differences in dynamic random-dot stimuli.

Previous research has shown that a field of random dots in which each dot alternates between a slow and a fast speed, can give rise to the percept of two superimposed sheets of moving dots when the alternations are out of phase or asynchronous with each other [Vis. Res. 35 (1995) 1691]. Under those conditions, observers can discriminate changes in the slow speed independent of changes in the fast speed. The present study investigated whether such motion-based segregation could result when dots alternated between two different directions. Three observers viewed a variety of displays containing two directions of motion, one upward and one oblique, with the task of discriminating small trial-to-trial changes in the direction of the upward component. The oblique direction component also changed direction from trial-to-trial. The field of dots either alternated synchronously (all dots moved in the same direction and switched to the other direction simultaneously) or asynchronously. Results showed that when the dots alternated synchronously between the directions, observers' direction discrimination performance was generally poor. However, when dots switched directions asynchronously, direction discrimination was only slightly elevated in comparison to that produced by a field of dots all moving in a single direction. Additional experiments demonstrated that this performance was not due to judging the global direction of the random-dot display. Thus the visual system had to segregate the stimulus into its component directions before integrating to arrive at the motion signal to be discriminated. It is concluded that for displays comprising elements that alternate between different directions, local direction signals can be used by the human visual system to effectively segregate a display so long as both direction signals are present simultaneously.

Differential Threshold↗