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Modeling the physiological responses of anuran R3 ganglion cells.

Teeters and Arbib (Bio Cybernet 1991;64:197-207) presented a model of the anuran retina which qualitatively accounts for some of the characteristic response properties used to distinguish ganglion cell type in anurans. Teeters et al. (Vis Res 1993;33:2361-2379) tested the model's ability to reproduce data of Ewert and Hock (Exp Brain Res 1972;16:41-59) relating toad R2, R3 and R4 ganglion cell responses to moving worm, antiworm and square-shaped stimuli of various edge lengths for stimulus shape and size dependency. In this paper we provide an exhaustive analysis of the performance of the modeled R3 cells with respect to most of the known qualitative and quantitative physiological properties of natural R3 ganglion cells. We also introduce several relevant predictions of the model relating different responses of R3 cells under the effect of changes in different model components. In some cases the predictions have been tested in neurophysiological experiments.

Animals↗

Display symmetry affects positional specificity in same-different judgment of pairs of novel visual patterns.

Deciding whether a novel visual pattern is the same as or different from a previously seen reference is easier if both stimuli are presented to the same rather than to different locations in the field of view (Foster & Kahn (1985). Biological Cybernetics, 51, 305-312; Dill & Fahle (1998). Perception and Psychophysics, 60, 65-81). We investigated whether pattern symmetry interacts with the effect of translation. Patterns were small dot-clouds which could be mirror-symmetric or asymmetric. Translations were displacements of the visual pattern symmetrically across the fovea, either left-right or above-below. We found that same-different discriminations were worse (less accurate and slower) for translated patterns, to an extent which in general was not influenced by pattern symmetry, or pattern orientation, or direction of displacement. However, if the displaced pattern was a mirror image of the original one (along the trajectory of the displacement), then performance was largely invariant to translation. Both positional specificity and its reduction in symmetric displays may be explained by location-specific pre-processing of the visual input.

Adult↗

The role of convexity in perceptual completion: beyond good continuation.

Since the seminal work of the Gestalt psychologists, there has been great interest in understanding what factors determine the perceptual organization of images. While the Gestaltists demonstrated the significance of grouping cues such as similarity, proximity and good continuation, it has not been well understood whether their catalog of grouping cues is complete--in part due to the paucity of effective methodologies for examining the significance of various grouping cues. We describe a novel, objective method to study perceptual grouping of planar regions separated by an occluder. We demonstrate that the stronger the grouping between two such regions, the harder it will be to resolve their relative stereoscopic depth. We use this new method to call into question many existing theories of perceptual completion (Ullman, S. (1976). Biological Cybernetics, 25, 1-6; Shashua, A., & Ullman, S. (1988). 2nd International Conference on Computer Vision (pp. 321-327); Parent, P., & Zucker, S. (1989). IEEE Transactions on Pattern Analysis and Machine Intelligence, 11, 823-839; Kellman, P. J., & Shipley, T. F. (1991). Cognitive psychology, Liveright, New York; Heitger, R., & von der Heydt, R. (1993). A computational model of neural contour processing, figure-ground segregation and illusory contours. In Internal Conference Computer Vision (pp. 32-40); Mumford, D. (1994). Algebraic geometry and its applications, Springer, New York; Williams, L. R., & Jacobs, D. W. (1997). Neural Computation, 9, 837-858) that are based on Gestalt grouping cues by demonstrating that convexity plays a strong role in perceptual completion. In some cases convexity dominates the effects of the well known Gestalt cue of good continuation. While convexity has been known to play a role in figure/ground segmentation (Rubin, 1927; Kanizsa & Gerbino, 1976), this is the first demonstration of its importance in perceptual completion.

Cues↗

Tilt dependency of slant aftereffect.

Slant aftereffect (SAE), the negative aftereffect of slant induced after prolonged observation of a surface, is considered as evidence that slant is encoded in the visual system. Because slant and tilt are mathematically independent dimensions, Stevens (Stevens, K. A. (1983a). Biological Cybernetics, 46, 183-195) assumed that slant and tilt are processed independently in the visual system. To confirm this assumption, we investigated whether SAE is induced independently of the difference in tilt between the adapting and test stimuli. The stimuli were displayed by simulating the motion disparity of rotating disks. After adaptation to a surface of 60 degrees slant, the subjective 0 degree slants of the test stimulus were measured with the tilt differences of 0, 45, 90, 135 and 180 degrees. The magnitude of SAE was greatest when the tilt difference was zero, and decreased with increasing tilt difference. The results suggest that slant and tilt are not processed independently in the visual system and that the slant detector in the visual system is sensitive not only to slant but also to tilt.

Computer Simulation↗

Bone mass, bone strength, muscle-bone interactions, osteopenias and osteoporoses.

Densitometrically, the skeleton is currently conceived as 'a systemically regulated mass of mineralized material that is born, grows, reaches a more or less high peak, and then declines faster or slower as to develop a correspondingly high or low fracture risk'. Alternatively, from a biomechanical point of view, the skeleton can be conceived as 'a biomechanically-regulated structure that can be systemically disturbed (in the cybernetic sense), the strength of which depends on the intrinsic stiffness (material properties) and the spatial distribution (architectural properties) of the mineralized tissue'. The biomechanical feedback system involved (bone 'mechanostat') would not control bone mass to optimize bone strength; it would rather control bone material quality and architecture (through a modulation of bone modeling and remodeling) in order to optimize bone stiffness. The natural stimuli for the bone mechanostat would be the customary strains of bone tissue (sensed by osteocytes) that are induced by gravitational forces and, more importantly, the contractions of regional muscles. According to this view, the development of any bone-weakening disease should be related to either (1) an intrinsic illness of the system (primary disturbances of bone cells), (2) a lack of mechanical stimulation (disuse-induced bone losses), or (3) a systemically-induced shift of the system's setpoint (systemic or secondary bone diseases). This short review aims to conciliate those views: (1) taking profit of the diagnostic possibilities provided by densitometric bone 'mass' determinations; (2) proposing other resources to assess bone mechanical properties; and (3) analyzing the muscle-bone interactions. These are crucial for achieving a differential diagnosis between disuse and primary or secondary bone disturbances, based either (1) on the densitometric determination of bone and muscle masses that would provide an anthropometric diagnosis of osteopenia (not osteoporosis because no extrapolations to bone strength can be made this way) or (2) on the cross-sectional analyses of bone structure or strength and muscle strength provided by bone tomography, magnetic resonance or other techniques that could afford a diagnosis of osteoporosis according to biomechanical criteria.

Aged↗

Changing images of the gene.

During the twentieth century the gene emerged as the major driving force of biology. Initially, even the nature and behavior of gene vehicles, the chromosomes, were subjected to doubts. The basic or standard gene concept, as a unit of function, mutation, and recombination, had to be revised. Half a century was required for reaching a general consensus about the chemical nature of the genetic material, DNA and RNA. The relationship between single genes and individual proteins was a great milestone at the middle of the twentieth century, but within two decades it was realized that the relationship was more complex. Understanding of genetic coding, transcription, and translation during the 1960s laid a firm foundation to the "nucleic doctrine," harking back to the dicta of Lederberg (1959) and meaning that single nucleic acid genes alone were responsible for each separate function within the cell. However, important aspects of gene expression are recognized now as a function of the genome and many genes collaborate in circuits. It has come to light that genes may be mobile, exist in plasmids and cytoplasmic organelles, and can be imported by nonsexual means from other organisms or as synthetic products. Epigenetics has reborn as a new field of developmental genetics. The unorthodox prion proteins can even simulate some gene properties. Genetics was to an extent reincarnated as of the twenty-first century by assimilating the tools of cybernetics and of many formerly distant areas of science. This overview highlights some of the historical milestones that contributed to the development of our image of the gene, extending elements of issues laid down by Rédei (2003).

Alleles↗

Integrating mind and brain: Warren S. McCulloch, cerebral localization, and experimental epistemology.

Recently, historians have focused on Warren S. McCulloch's role in the cybernetics movement during the 1940s and 1950s, and his contributions to the development of computer science and communication theory. What has received less attention is McCulloch's early work in neurophysiology, and its relationship to his philosophical quest for an 'experimental epistemology' - a physiological theory of knowledge. McCulloch's early laboratory work during the 1930s addressed the problem of cerebral localization: localizing aspects of behaviour in the cerebral cortex of the brain. Most of this research was done with the Dutch neurophysiologist J.G. Dusser de Barenne at Yale University. The connection between McCulloch's philosophical interests and his experimental work can be expressed as a search for a physiological a priori, an integrated mechanism of sensation.

Brain↗

Theoretical and clinical aspects of the tonsillar function.

A general review of the state of the art in tonsillar function research is given. A proliferation of B lymphocytes, evoked by antigens and/or polyclonal activators, occurs in the tonsil. Such a process, i.e. the supply of B cells to the organism facilitating a number of immune reactions, is to be considered the main function of the tonsil. The formation of antibodies must be regarded as a by-effect caused by an intratonsillar defence mechanism; it is helpful in safeguarding the structural and functional integrity of the organ. A model of the tonsil on the basis of cybernetics is derived from the results obtained and from the histological structure of the organ. Tonsillar involution is characterized by a decline in B cell proliferation, eventually leading to a weakening of the intratonsillar defence mechanism. Genetic disposition and defective functioning of the intratonsillar defence mechanism are discussed as pathogenetic factors in tonsillitis.

Adult↗

Social-physiological compliance as a determinant of team performance.

A cybernetic model of behavior predicts that team performance may depend on physiological compliance among participants. This laboratory study tested if compliance in electrodermal activity (EDA), heart rate or breathing in two-person teams (N=16) was predictive of team performance or coordination in a continuous tracking task simulating teleoperation. Visual contact among participants was manipulated. Physiological compliance was scored with weighted coherence and cross correlation. Separate multiple regression analyses revealed that the task completion time was predicted by coherence measures for EDA and heart, but only at a trend level for breathing. Task completion time was also predicted by heart cross correlation. Team tracking error was predicted by coherence measures for EDA, heart and breathing, and also heart cross correlation. While social-visual contact did not have an impact, physiological compliance was predictive of improved performance, with coherence robust over all three physiological measures. Heart cross correlation showed the strongest predictive relationships. These results provide evidence that physiological compliance among team members may benefit team performance. While further study is needed, physiological compliance may someday provide a needed tool for the study of team work, and an objective means to guide the ergonomic design of complex sociotechnical systems requiring a high degree of team proficiency.

Adolescent↗

An information typology for understanding living systems.

It is argued that we can improve our understanding of living systems by focusing on their informational processes. Recent developments, primarily in evolutionary biology, cybernetics and systems theory, suggest that informational processes are of at least two, and probably three, different types; and that the interaction of these types can be seen as a basis for the self-construction of living systems. Following the work of Csanyi and Kampis, a distinction is drawn between referential and nonreferential information. This typology is further extended to include statereferential information. The statereferential type serves to lend stability to informational arrangements (organization) that are viable so that they may be propagated in space and time.

Information Science↗

Some contributions of Rafael Lorente de Nó to neuroscience: a reminiscence.

Rafael Lorente de Nó is one of the towering neuroscientists of the 20th century. He was born in Zaragoza, Spain, in 1902. In 1920, he moved to Madrid where he became the youngest, and eventually the best known, of Ramón y Cajal's disciples. In his youth, Lorente de Nó worked with Oskar and Cécile Vogt in Germany and with Robert Bárány in Sweden. In 1934, he moved to the United States, where he first worked at the Central Institute for the Deaf (CID); in 1936, he was invited by Herbert S. Gasser to work at the Rockefeller Institute. After his formal retirement from this institute in 1972, Lorente de Nó spent 5 years at the Head and Neck Surgery Department and Brain Research Institute of the University of California at Los Angeles. He died in Tucson, Arizona, in 1990. Lorente de Nó was a gifted person: a polyglot with a remarkable memory and a versatile intellect, which together with his strong, almost belligerent character, made him a rather controversial human. The strength of his scientific contributions is evident by their current impact. Among these are: the modular (i.e., columnar) organization of the cerebral cortex, the synaptic delay, nerve volume conduction, synaptic summation, and the cybernetic (feed-back) neuron circuit. The present article provides a comment upon some of his neurohistological studies (including the cerebral isocortex, Ammon's horn, brainstem, and spinal cord), highlighted by transcripts from taped conversations with him, and illustrated by reproductions of some of his original figures.

Animals↗

Quantitative examinations for multi joint arm trajectory planning--using a robust calculation algorithm of the minimum commanded torque change trajectory.

In previous research, criteria based on optimal theories were examined to explain trajectory features in time and space in multi joint arm movement. Four criteria have been proposed. They were the minimum hand jerk criterion (by which a trajectory is planned in an extrinsic-kinematic space), the minimum angle jerk criterion (which is planned in an intrinsic-kinematic space), the minimum torque change criterion (where control objects are joint links; it is planned in an intrinsic-dynamic-mechanical space), and the minimum commanded torque change criterion (which is planned in an intrinsic space considering the arm and muscle dynamics). Which of these is proper as a criterion for trajectory planning in the central nervous system has been investigated by comparing predicted trajectories based on these criteria with previously measured trajectories. Optimal trajectories based on the two former criteria can be calculated analytically. In contrast, optimal trajectories based on the minimum commanded torque change criterion are difficult to be calculated, even with numerical methods. In some cases, they can be computed by a Newton-like method or a steepest descent method combined with a penalty method. However, for a realistic physical parameter range, the former becomes unstable quite often and the latter is unreliable about the optimality of the obtained solution. In this paper, we propose a new method to stably calculate optimal trajectories based on the minimum commanded torque change criterion. The method can obtain trajectories satisfying Euler-Poisson equations with a sufficiently high accuracy. In the method, a joint angle trajectory, which satisfies the boundary conditions strictly, is expressed by using orthogonal polynomials. The coefficients of the orthogonal polynomials are estimated by using a linear iterative calculation so as to satisfy the Euler-Poisson equations with a sufficiently high accuracy. In numerical experiments, we show that the optimal solution can be computed in a wide work space and can also be obtained in a short time compared with the previous methods. Finally, we perform supplementary examinations of the experiments by Nakano, Imamizu, Osu, Uno, Gomi, Yoshioka et al. (1999). Estimation of dynamic joint torques and trajectory formation from surface electromyography signals using a neural network model. Biological Cybernetics, 73, 291-300. Their experiments showed that the measured trajectory is the closest to the minimum commanded torque change trajectory by statistical examination of many point-to-point trajectories over a wide range in a horizontal and sagittal work space. We recalculated the minimum commanded torque change trajectory using the proposed method, and performed the same examinations as previous investigations. As a result, it could be reconfirmed that the measured trajectory is closest to the minimum commanded torque change trajectory previously reported.

Algorithms↗

Temporal binding as an inducer for connectionist recruitment learning over delayed lines.

The temporal correlation hypothesis proposes using distributed synchrony for the binding of different stimulus features. However, synchronized spikes must travel over cortical circuits that have varying length pathways, leading to mismatched arrival times. This raises the question of how initial stimulus-dependent synchrony might be preserved at a destination binding site. Earlier, we proposed constraints on tolerance and segregation parameters for a phase-coding approach, within cortical circuits, to address this question [Proceedings of the International Joint Conference on Neural Networks, Washington, DC, 2001]. The purpose of the present paper is twofold. First, we conduct simulation experiments to test the proposed constraints. Second, we explore the practicality of temporal binding to drive a process of long-term memory formation based on a recruitment learning method [Biol. Cybernet. 46 (1982) 27]. A network based on Valiant's neuroidal architecture [Circuits of the mind, 1994] is used to demonstrate the coalition between temporal binding and recruitment. Complementing similar approaches, we implement a continuous-time learning procedure allowing computation with spiking neurons. The viability of the proposed binding scheme is investigated by conducting simulation studies which examine binding errors. In the simulation, binding errors cause the perception of illusory conjunctions among features belonging to separate objects. Our results indicate that when tolerance and segregation parameters obey our proposed constraints, the assemblies of correct bindings are dominant over assemblies of spurious bindings in reasonable operating conditions.

Learning↗

The physical nature of life.

Life evolved from the primeval world of physics. Sensory systems inform animals of the natural environment, enabling them to conduct responsively. The discovery of weak, DC bioelectric fields in the vicinity of aquatic organisms and the role they play in guiding sharks and rays to their prey have led to the recognition of fundamental, hitherto less well known, physical aspects of sensory biology. The inferred cybernetic algorithm of electric-field orientation in sharks and rays is highly effective and extremely robust. In orienting to the weak DC electric fields of ocean currents and to the earth's magnetic field, sharks and rays unwittingly practise the motional-electric principles that Einstein had in mind when he introduced the special theory of relativity. At the sense-organ, receptor-membrane, and ion-channel levels, the elasmobranch ampullae of Lorenzini operate on the basis of graded positive feedback driven by negative conductance, supposedly employing voltage-sensitive ion channels as the active, excitable elements. The electric sense of sharks and rays presents an exquisite implementation of the very biophysical principles that also govern the graded, much richer than all-or-none, integrative brain processes of animal and man.

Animals↗

The human digastric muscle: patterns and variations with clinical and surgical correlations.

The digastric muscle is located in the suprahyoid region on each side and frequently exhibits two muscular bellies (anterior and posterior) linked by an intermediate tendon. The paired digastric muscles act together either depressing the mandible or elevating the hyoid bone; therefore acting as a single muscle with important physiological roles. In the present study, the digastric muscle has been analyzed bilaterally in 74 adult human cadavers. A computerized morphometrical investigation of the digastric muscles has been performed (Image Pro Plus software package, Media Cybernetics, USA) and the resulting quantitative data have been statistically assessed (SPSS 11.0 for Windows, USA). We hereby propose an original morphological classification that encompasses five types (I-V) for the anterior belly (AB); three types (I-III) for the intermediate tendon (IT); and two types (I-II) for the posterior belly (PB) of the human digastric muscle. In each digastric muscle, the aforementioned anatomical types have been characterized according to the muscular bellies and intermediate tendon. Consequently, as a result of the combinations of those diverse types, individual digastric muscles have been considered as pertaining to distinctive morphological patterns (named from A to J). Cases with absence of either AB or PB have been included in patterns K and L and would be more appropriately defined as monogastric muscles. This innovative classification provides clear-cut anatomical parameters for interpreting morphological variants of the digastric muscle with relevant clinical and surgical correlations.

Adult↗

On the bifurcation of blood vessels--Wilhelm Roux's doctoral thesis (Jena 1878)--a seminal work for biophysical modelling in developmental biology.

Wilhelm Roux's doctoral thesis described the relationship between the angle and diameter of bifurcating blood vessels. We have re-read this work in the light of biophysics and developmental biology and found two remarkable aspects hidden among a multitude of observations, rules and exceptions to these rules. First, the author identified the major determinants involved in vascular development; genetics, cybernetics, and mechanics; moreover, he knew that he could not deal with the genetic and regulatory aspects, and could hardly treat the mechanical part adequately. Second, he was deeply convinced that the laws of physics determine the design of organisms, and that a necessity for optimality was inherent in development. We combined the analysis of diameter relationships with the requirement for optimality in a stochastic biophysical model, and concluded that a constant wall-stress condition could define a minimum wall-tissue optimum during arterial development. Hence, almost 120 years after Wilhelm Roux's pioneering work, our model indicates one possible way in which physical laws have determined the evolution of regulatory and structural properties in vessel wall development.

Animals↗

Constitutional delay of growth and adolescence.

Constitutional delay of growth and adolescence (CDGA) is characterized by simultaneous retardation of growth, skeletal maturation and sexual development. Primarily longitudinal growth is impaired. The late occurrence of puberty is a secondary phenomenon brought about by the retarded physical development. Plasma levels of sex hormones and gonadotrophin correlate with bone age, not with chronological age. The provocation tests for growth hormone (GH) show normal results. In contrast, the spontaneous secretion of GH, measured half-hourly through the night or over 24 hours, is markedly reduced. Plasma somatomedin C is diminished. According to these data, CDGA is not a genuine GH deficiency but represents a cybernetic disorder coinciding with a false threshold for GH. As shown by large series of investigations, the final height of the patients lies on average 1.85 SD below the mean of healthy adults, with large individual variations. The decision as to whether treatment by growth promoting hormones should be performed should be made with regard to the individual height prognosis. With GH in physiological doses growth velocity can be considerably increased. Bigger doses of the hormone appear to be necessary in order to enhance final height. Treatment by anabolics and testosterone increases height velocity only, not adult height.

Adolescent↗

Mathematical models of metabolic pathways.

There have been recent advances in metabolic flux analysis. In particular, the marriage of traditional flux balancing with NMR isotopomer distribution analysis holds great promise for the detailed quantification of physiology. Nevertheless, flux analysis yields only static snap-shots of metabolism. To robustly predict the time evolution of metabolic networks, dynamic mathematical models, especially those that contain a description of both gene expression as well as enzyme activity, must be utilized. When mechanistic control and regulatory information is not available, heuristic-based methods, such as the cybernetic framework, can be employed to describe the action of these control mechanisms. In the 'high-information' future, as more biological information becomes available, such heuristic-based approaches can be replaced by mechanistic mass-action representations of physiology that stem directly from genetic sequence.

Animals↗