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Low-dose risk, hormesis, analogical and logical thinking.

The hormesis theory proposes the low-dose beneficial and high-dose detrimental pattern, existing for specific conditions, as a "general default assumption" for toxicology and carcinogenicity. Crump and Kitchin and Drane underline that in a post hoc retrospective scientific literature searching for hormetic dose-response patterns, the consideration of the whole available relevant studies is necessary and, for statistical testing purposes, for instance at a 0.05 standard level, a P value obtained from 1 - (1 - P)(n) = 0.05 (i.e., P = 0.0005 for 100 examined cases) should be used (otherwise, by definition, 5 "positive" results are expected by chance over 100 cases). The hypothesis, based on some experimental data on rodents, by Calabrese and Baldwin, of an hormetic effect of 2,3,7,8-TCDD at the 1-10 ng/kgbw/day dose, of Na-saccharine in the < or = 1% of diet exposure range, of Cadmium Chloride in the 0-5 micromol/kg dose range, single injection, and of neutrons in the 0- to 2-rad dose range, are not confirmed, and, rather, are contradicted, when the whole relevant data presented by international and national agencies are considered. As far as the radiation risk is in particular concerned, a recently published epidemiological study on more than 400,000 nuclear plant workers, co-ordinated by the IARC has indicated a small, but significant risk, at the current exposure limits, and possibly below them. Therefore, the hormesis theory-based criticism of current radiation protection criteria, assumed to be excessively conservative, is not justified. Also not justified is the assumption that "by dismissing hormesis, regulatory agencies such as U.S. EPA deny the public the opportunity for optimal health and avoidance of diseases;" rather, the contrary is here considered true. Analogical considerations are not necessarily logical ones and the single result should be considered in its whole context.

Animals↗

Take away their hammer: logical and ethical problems in Range and Cotton's "Reports of assent and permission in research with children: illustrations and suggestions.

Range and Cotton (1995) showed that many of the articles reviewed in their study did not include a line specifying institutional review board-approved procurement of informed parental permission and child assent for child research. Range and Cotton stated that the absence of the line suggests a lack of sensitivity to permission/assent issues, implied that many authors of the articles did not obtain permission/assent, and said those who did but did not report it were camouflaging those who did not. In this article, the logic of these points is refuted, the ethics of the Range and Cotton study are questioned, and its potential divisiveness is lamented.

Behavioral Research↗

Drugs and double binds: racial identification and pharmacogenomics in a system of binary race logic.

People respond to drugs in different ways depending on their genotype. Some geneticists and medical researchers have suggested using race as a substitute for genotype in prescribing medication. Overall, individuals resist the prescription of medication based on race, but some minority individuals, although indicating resistance and suspicion, ultimately choose race-based medication. This can be explained by the operation of Burkean identification in a system of binary race logic. Although individuals resist race-based medication and recognize race is not a legitimate genetic category, their identification with a racial-ethnic group places them in a double bind between choosing race-based medication or denying their racial identification.

Double Bind Interaction↗

A logical learning theory explanation of why personality scales predict behavior.

An explanation of why personality scales predict is drawn from the tenets of logical learning theory (Rychlak, 1977). This theory holds that behavior is not only responsive in nature, but also telosponsive, i.e., enacted intentionally for the sake of premises. Personality scales tap the subject's premises concerning some aspect of behavior, the meanings of which are then extended in behavior telosponsively so that a prediction to some criterion performance becomes possible. The subject in effect creates the behavior based on his or her premises. An important telosponse inhuman learning is that of affective assessment, which is operationalized as reinforcement value (like-dislike). Two experiments establish the role of reinforcement value in scale measurement and prediction. The first demonstrates that subjects score higher on personality dimensions which they like very much than on dimensions which they greatly dislike. The second experiment then establishes that a personality dimension which a subject both likes and scores highly on is more predictive to an independently assessed manifestation of this personality characteristic than is a comparable dimension which is disliked.

Journal Article↗

Lateral inhibition in proneural clusters: cis-regulatory logic and default repression by Suppressor of Hairless.

Lateral inhibition, wherein a single cell signals to its neighbors to prevent them from adopting its own fate, is the best-known setting for cell-cell communication via the Notch (N) pathway. During peripheral neurogenesis in Drosophila, sensory organ precursor (SOP) cells arise within proneural clusters (PNCs), small groups of cells endowed with SOP fate potential by their expression of proneural transcriptional activators. SOPs use N signaling to activate in neighboring PNC cells the expression of multiple genes that inhibit the SOP fate. These genes respond transcriptionally to direct regulation by both the proneural proteins and the N pathway transcription factor Suppressor of Hairless [Su(H)], and their activation is generally highly asymmetric; i.e. only in the inhibited (non-SOP) cells of the PNC, and not in SOPs. We show that the substantially higher proneural protein levels in the SOP put this cell at risk of inappropriately activating the SOP-inhibitory genes, even without input from N-activated Su(H). We demonstrate that this is prevented by direct ;default' repression of these genes by Su(H), acting through the same binding sites it uses for activation in non-SOPs. We show that de-repression of even a single N pathway target gene in the SOP can extinguish the SOP cell fate. Finally, we define crucial roles for the adaptor protein Hairless and the co-repressors Groucho and CtBP in conferring repressive activity on Su(H) in the SOP. Our work elucidates the regulatory logic by which N signaling and the proneural proteins cooperate to create the neural precursor/epidermal cell fate distinction during lateral inhibition.

Animals↗

Prediction of rodent carcinogenicity bioassays from molecular structure using inductive logic programming.

The machine learning program Progol was applied to the problem of forming the structure-activity relationship (SAR) for a set of compounds tested for carcinogenicity in rodent bioassays by the U.S. National Toxicology Program (NTP). Progol is the first inductive logic programming (ILP) algorithm to use a fully relational method for describing chemical structure in SARs, based on using atoms and their bond connectivities. Progol is well suited to forming SARs for carcinogenicity as it is designed to produce easily understandable rules (structural alerts) for sets of noncongeneric compounds. The Progol SAR method was tested by prediction of a set of compounds that have been widely predicted by other SAR methods (the compounds used in the NTP's first round of carcinogenesis predictions). For these compounds no method (human or machine) was significantly more accurate than Progol. Progol was the most accurate method that did not use data from biological tests on rodents (however, the difference in accuracy is not significant). The Progol predictions were based solely on chemical structure and the results of tests for Salmonella mutagenicity. Using the full NTP database, the prediction accuracy of Progol was estimated to be 63% (+/- 3%) using 5-fold cross validation. A set of structural alerts for carcinogenesis was automatically generated and the chemical rationale for them investigated- these structural alerts are statistically independent of the Salmonella mutagenicity. Carcinogenicity is predicted for the compounds used in the NTP's second round of carcinogenesis predictions. The results for prediction of carcinogenesis, taken together with the previous successful applications of predicting mutagenicity in nitroaromatic compounds, and inhibition of angiogenesis by suramin analogues, show that Progol has a role to play in understanding the SARs of cancer-related compounds.

Animals↗

Frequency-multiplexed logic circuit based on a coherent optical neural network.

We propose an adaptive logic circuit whose function can be controlled by optical carrier frequency modulation. The circuit learns the desired functions by adjusting the delay time at a spatial light modulator with a complex-valued Hebbian learning rule. After the learning, the circuit can switch its function all at once. A high degree of mechanical stability is achieved by spatial phase-difference coding. Two orthogonal phase components are detected in parallel spatially. Experiments demonstrate that the system works as an AND circuit at a certain frequency and as an XOR at another. The proposal will enhance the design of optical plastic cell architectures.

Journal Article↗

Achieving stabilization in interferometric logic operations.

Interferometric systems with amplitude beam splitters can implement reversible operations that, on detection, become Boolean operators. Being passive, they consume no energy, do not limit the operating bandwidth, and have negligible latency. Unfortunately, conventional interferometric systems are notoriously sensitive to uncontrolled disturbances. Here the use of polarization in a common-path interferometric logic gate with and without polarization beam splitters is explored as an attractive alternative to overcome those difficulties. Two of three device configurations considered offer significant stability and lower drive modulator voltage as advantages over the previous systems. The first experimental tests of such a system are reported. Common-path interferometry lends itself to even more stability and robustness by compatibility with no-air-gap, solid optics.

Journal Article↗

Experimental observation of a 1.5 microm band wavelength conversion and logic NOT gate at 40 Gbit/s based on sum-frequency generation.

We have experimentally verified a new idea for 40 Gbit/s wavelength conversion within the 1.5 microm band based on sum-frequency generation (SFG) in a periodically poled LiNbO3 waveguide. The spectrum and the temporal waveform of the output pump reveal that the input cw pump is converted to an optical pulse during SFG. Not only wavelength conversion but also a logic NOT gate at 40 Gbit/s are experimentally observed.

Journal Article↗

Fuzzy logic for identifying pigments studied by Raman spectroscopy.

Fuzzy logic and linguistic variables are used for the automatic interpretation of Raman spectra obtained from pigments found in cultural heritage art objects. Featured bands are extracted from a Raman spectrum of a reference pigment and the methodology for constructing the library is illustrated. An unknown spectrum is then interpreted automatically and a process for identifying the corresponding pigment is described. A reference library consisting of 32 pigments was built and the effectiveness of the algorithm was tested by the Raman spectroscopic analysis of 10 pigments that are known to have been extensively used in Byzantine hagiography. Binary mixtures of these pigments were also tested. The algorithm's level of identification was good even though extra peaks, noise, and background signals were encountered in the spectra.

Journal Article↗

Solution-phase molecular-scale computation with deoxyribozyme-based logic gates and fluorescent readouts.

Recent development of solution-phase molecular-scale Boolean calculations using deoxyribozymes is potentially an important step toward the development of autonomous therapeutic and diagnostic devices. Here, the construction of basic YES, AND, ANDNOT, and ANDANDNOT deoxyribozyme-based logic gates is described. Protocols for testing gate activity using fluorescent oligonucleotide probes have been provided, and pointers for gate optimization are included.

Base Sequence↗

Biological information processing requires quantum logic.

Chaos dynamics, which characterizes biological information processing, generates information along the course of temporal development of the relevant system. In this system, the macroscopic uncertainty principle holds between observation time delta t and phase space volume delta omega determined by this observation. In other words delta t and delta omega cannot simultaneously be small. This principle corresponds to the microscopic uncertainty principle that holds in quantum physics. Through an analogy to this correspondence, it is shown that quantum logic might also govern such macroscopic phenomena as are governed by chaos dynamics.

Behavior↗

The logic of play in psychoanalysis.

The paper puts forward the idea that play is at work all the time in psychoanalysis. The play element functions continuously to sustain a paradoxical reality where things may be real and not real at the same time. This paradox is what allows the work of psychoanalysis to take place. The concept of play covers different activities with complex interrelations, and general definitions may be misleading. The essential element is the framework that makes the paradoxical reality possible. The logical structure of the play framework is investigated, and the paper clarifies the relations between the play frame, transference and enactment. Play and humour are compared. Spontaneity is the essence of both, and the criterion for analytic validity in both cases is whether they deepen the analytic process. The tragic and ironic aspects of psychoanalysis are related to the intrinsic connection between play and loss. The relation between play and games is discussed. The rule-bound quality of games can block more exploratory kinds of play, but it may be necessary to accept this, in order for analysis to feel safe enough. Clinical material illustrates the importance of the play framework, both in a case marked by prolonged hostile and negative states of mind, and in others where more straightforward playfulness was possible.

Hostility↗

Once again on cardiac transplantation. Flaws in the logic of the proponents.

In response to a paper written by Drs. Toshima and Kawai trying to refute my earlier article on the movement for cardiac transplantation in Japan, I present the results of my survey of the opinions of medical students and student nurses to prove that polls showing a majority of people supporting organ transplantation from so-called brain-dead persons, to which transplant protagonists rely heavily, merely reflect the failure of the mass media to distribute information on the negative aspects of organ transplantation to the public. Several major flaws in the logic of the proponents are pointed out to show how fragile their theoretical background is. Thus, the need for the distribution of better-balanced information to the public and continued debate on this most serious medical, ethical, social and cultural issue is emphasized.

Brain Death↗

A logical approach to renal stone removal.

On the basis of experience with over 350 percutaneous stone extractions, a logical approach assuring a high success rate and minimizing complications is described. The importance of the position of the kidney in the body, the caliceal anatomy, the renal arterial anatomy, and the instrumentation used on puncture site selection are discussed. Strategies for removal of caliceal, pelvic, ureteral, and staghorn calculi, rationale, and treatment of complications are also described.

Humans↗

Speech Sounds Perception Test: nonrandom response locations form a logical fallacy in structure.

The response format of the Speech Sounds Perception Test confounds speech perception with irrelevant method variance. To rectify this problem the response format was revised by randomizing the response locations. An empirical comparison of the revised and original forms was undertaken with forensic (n=59) and psychiatric (n=67) samples. The empirical results coupled with the logical problem in the original form indicates that a revision is necessary.

Adult↗

Ambivalence--a logical response to legal abortion: a prospective study among women and men.

The aim of the study was to elucidate ambivalence in relation to legal abortion by studying emotions, attitudes, motives for abortion and ethical reasoning in a strategic sample of women and men who, 1 year after abortion, expressed both positive and painful feelings in relation to the abortion. The study shows that social perspectives legitimate the decision to have an abortion whilst ethical perspectives complicate the decision. Nearly all women and men described having the abortion as an expression of responsibility. Almost one-half also had parallel feelings of guilt, as they regarded the abortion as a violation of their ethical values. The majority of the sample expressed relief while simultaneously experiencing the termination of the pregnancy as a loss coupled with feelings of grief/emptiness. In spite of the ambivalence, only one woman regretted the abortion. For the vast majority, the impact of the abortion had led to increased maturity and deepened self-knowledge. Thus, ambivalence might be regarded not only as problematic but also as indicating openness to the complexity of the abortion issue. Since incompatible values clash in connection with abortion, experiences of ambivalence become both logical and understandable.

Abortion, Legal↗

A logical stepwise approach to laser diffraction particle size distribution analysis methods development and validation.

In this study, a logical, stepwise, efficient approach was used to develop and validate particle size distribution analysis methods for 58 different pharmaceutical bulk powders in a timely fashion. Image analysis was used to determine particle morphology and laser diffraction particle size distribution analysis was used to evaluate the dispersion medium, dispersion concentration, sonication time, and dispersion stability. Ruggedness validation was performed, by two different analysis, on different days, with different instruments on two preparations each of two different lots of material. It was determined that if the relative standard deviation (RSD) of the median volume diameters (d50) of the four preparations for each lot was below 20%, the method was suitably rugged for use in a quality control setting. Data for methyldopa, metoprolol tartrate, and metronidazole are presented as typical method validation results for three different modes of analysis. Data at three points (d10, d50, and d90) on the distributions were tabulated and evaluated for all 58 methods validated. The median volume diameter (d50) was found to be adequate for method validation. The approach rapidly generated valid, reproducible particle size distribution analysis methodology.

Chemistry, Pharmaceutical↗