Search PubMed⌕ Search

SEARCH · Search PubMed

Results for “TMP”

Search indexed PubMed citations on genomics, clinical trials, systematic reviews and public health. Explore titles, authors and supplied subject terms, then open the PubMed record.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 721 records · Page 40Linked to original sources
PubMed2003

Topography and elimination of slow EEG responses related to tongue movements.

This study aimed to characterize the topography and mechanism of slow EEG potentials related to tongue movement (TMP), and to devise a method for their elimination. Eight adult subjects were recorded with 8-channel direct current (DC) EEG (n = 5) or with a 256-channel, dense array EEG (n = 4). Subjects were requested to push their tongue toward the incisors in a closed mouth. We examined the time course and topography of the ensuing TMP. The underlying mechanism and elimination of TMP were studied by electrical isolation of the tongue with a latex sheet, and by short-circuiting of tongue to gingival pouch. Forward movement of the tongue caused global changes in scalp potentials, with frontal areas more positive, and the strongest gradients between the mastoid region and other scalp areas. Scalp current source density was highest near ear canals and orbital fossae. Electrical isolation of the tongue tip with a latex sheet resulted in a near-complete elimination of TMPs, while short-circuiting resulted in high amplitude responses, suggesting that TMPs are caused by a change in the geometry of conductive pathways. Our results indicate that significant scalp potentials are caused by even modest tongue movements, which may occur subconsciously during various cognitive tasks. The topography and small amplitude of TMPs make their off-line rejection difficult, while an isolation method of the kind used here may substantially diminish TMP artifacts in studies on slow cognitive potentials.

Adult↗
PubMed1992

Transferable high-level trimethoprim resistance among isolates of Escherichia coli from urinary tract infections in Ontario, Canada.

Of 1171 isolates of Escherichia coli isolated from urine samples at the Public Health Laboratory, Toronto, Ontario, Canada, between May 1990 and December 1991, 120 (10.3%) were resistant to trimethoprim (TMP), cotrimoxazole (TMP/SMX), sulfamethoxazole (SMX) and other antimicrobial agents; 110 of the 120 isolates (91.7%) were resistant to four or more agents. The majority of resistant isolates (91.7%) exhibited high-level resistance (MIC > 1000 mg/L) to TMP. The MIC of TMP/SMX for all 120 isolates was > 2.0/38.0 mg/L and for SMX > 1024 mg/L. High-level resistances were also present among the beta-lactam antimicrobials with MICs ranging from 16- > 256 mg/L. Forty-three of 120 TMP-resistant (35.8%) isolates conjugally transferred TMP-resistance to E. coli K-12. Co-transfer of several other resistances was observed. SMX cotransferred from 86% of the 43 donors and beta-lactams together with SMX cotransferred from 70%. Nalidixic acid resistance was present among 22 (18.3%) of the 120 resistant isolates, however, nalidixic acid resistance was not transferred to E. coli K-12.

Drug Resistance, Microbial↗
PubMed1986

Photoreversal-dependent release of thymidine and thymidine monophosphate from pyrimidine dimer-containing DNA excision fragments isolated from ultraviolet-damaged human fibroblasts.

To elucidate the enzymatic excision-repair process operative on cyclobutane-type pyrimidine photodimers in human dermal fibroblasts, we have examined excised dimer-containing material recovered in the trichloroacetic acid soluble fraction from far-ultraviolet-irradiated (254 nm, 40 J m-2) and incubated (24 h) cell cultures. The excised DNA photoproducts were found in oligonucleotide fragments with an estimated mean chain length of approximately 3.7 bases. Exposure of these isolated excision fragments, labeled with [3H]thymidine (dT), to a secondary, dimer-photoreversing fluence of far-UV (5.5 kJ m-2) resulted in the release of free dT and thymidine monophosphate (TMP). Photorelease of these two radioactive species was measured by high-performance liquid chromatography, with TMP being detected as the increase in dT following bacterial alkaline phosphatase treatment. These data imply that the photoliberated dT and TMP moieties were attached to the excision fragments solely by the cyclobutane ring of the dimer. No evidence was obtained for the photoliberation of free thymine, thus corroborating a conclusion reached by others that the excision of dimers in human cells is not initiated by scission of an intradimer N-glycosyl bond. The sum of the tritium label recovered in dT plus TMP corresponded to approximately 40% of that disappearing from thymine-containing dimers on photoreversal, suggesting that in about 80% of the isolated excision fragments the dimer is located at one end of the oligonucleotide and contains a break in its internal phosphodiester bond.(ABSTRACT TRUNCATED AT 250 WORDS)

Adult↗
PubMed1988

Probing the surface of Z-DNA with anti-nucleoside antibodies.

Antibodies specific for cytidine (C) and guanosine (G) were used to probe the surface of two Z-DNA conformers. When tested by ELISA, anti-G reacted with poly(dG-dC).poly(dG-dC) treated with bromine water [Br-poly(dG-dC).poly(dG-dC)] but anti-C did not. A weak reaction with anti-C was detected by dot immunobinding. In contrast, anti-C reacted strongly with poly(dG-dC).poly(dG-dC) treated with N-acetoxy-2-(acetylamino)fluorene [AAF-poly(dG-dC).poly(dG-dC)]; anti-G reacted weakly, despite the fact that most G residues had not been substituted with AAF. Neither antinucleoside bound to the B conformation of poly(dG-dC).poly(dG-dC). In competition experiments, GMP was the most efficient competitor of the reaction of anti-G with Br-poly(dG-dC).poly(dG-dC); AMP and TMP were 100-fold less efficient, and CMP did not compete to a significant extent. In contrast, the reaction of anti-Z with Br-poly(dG-dC).poly(dG-dC) was not inhibited by nucleotides. Of five possible sites recognized on guanosine by anti-G antibodies (N1, C6, O6, N7, and C8), AMP and TMP share three or their equivalent and CMP only one. The binding of anti-C to AAF-poly(dG-dC).poly(dG-dC) was inhibited best by CMP; AMP was 8 times less efficient; GMP and TMP were about 35-fold less efficient than CMP. Thus, although the amino group on the C4 position of CMP appears to be immunodominant, the capacity of GMP and TMP to inhibit the reaction indicates that other sites are also recognized in AAF-poly(dG-dC).poly(dG-dC), e.g., the exposed C5 position.(ABSTRACT TRUNCATED AT 250 WORDS)

Adenosine Monophosphate↗
PubMed1989

Evidence for the formation of strand-break precursors in hydroxy-attacked thymidine 5'-monophosphate by the spin trapping method.

A method combining spin trapping, ESR, and HPLC was employed to obtain evidence for the formation of sugar radicals in OH-attacked TMP with special emphasis on the detection of strand-break precursors of DNA. OH radicals were produced by irradiating an N2O-saturated aqueous solution with X-rays. When an N2O-saturated aqueous solution containing TMP and a spin trapping reagent, MNP, was irradiated with X-rays, it was estimated on the basis of theoretical calculations using rate constants that 94% of the TMP radicals were induced by OH radicals. Since several spin adducts between TMP radicals and MNP, as well as the byproducts of the spin trapping reagent itself, were produced, reverse-phase HPLC was used to separate them. The presence of six spin adducts was confirmed by ESR examination. Further examination of these spin adducts by UV absorbance spectrophotometry showed the presence of a chromophore at 260 nm in three adducts. Since a gradual increase in the release of unaltered base from these adducts was observed when they were allowed to stand for 0-22 h at room temperature, they could be regarded as the spin adducts of sugar radicals and MNP. ESR spectra from the spin adducts were consistent with hydrogen abstraction radicals at the C1', C4', and C5' positions of the sugar moiety. These radicals appeared to be precursors of AP sites and strand breaks. In addition to these spin adducts, ESR spectra that were consistent with the spin adducts of base radicals (the C5 and C6 radicals) and MNP were observed.

Chromatography, High Pressure Liquid↗
PubMedDate not supplied

Structural and photophysical studies of Cu(NN)2+ systems in the solid state. Emission at last from complexes with simple 1,10-phenanthroline ligands.

For a variety of reasons, relating the photophysical properties of a copper phenanthroline to a structure in solution is problematic. To elucidate some of the issues involved, in this paper we describe the crystal and molecular structures of a series of Cu(NN)2(+)-containing systems along with spectral data obtained from the solids themselves. The NN ligands investigated are tmp (3,4,7,8-tetramethyl-1,10-phenanthroline), dpdmp (2,9-diphenyl-4,7-dimethyl-1,10-phenanthroline), dptmp (2,9-diphenyl-3,4,7,8-tetramethyl-1,10-phenanthroline), and dipp (2,9-diisopropyl-1,10-phenanthroline). The results show that a flattening distortion can have a large impact on the spectroscopic properties of a Cu(NN)2+ system, whereas a typical rocking distortion has comparatively little effect. The reflectance spectra of orange or orange-red salts that have approximately perpendicular phenanthroline ligands exhibit absorption bands in the neighborhood of 460 nm along with a shoulder at longer wavelength. In the other limit, when a pronounced flattening distortion occurs and the dihedral angle between ligands is 20 degrees or more off perpendicular, the reflectance spectrum exhibits two distinct visible bands with intense absorption occurring at 525 nm or even longer wavelength. If the phenanthroline ligand lacks bulky substituents in the 2,9 positions, the compound may even be purple, depending on the counterion. Cu(NN)2+ complexes that contain phenyl substituents in the 2,9 positions and exhibit long-wavelength absorption in solution probably adopt a flattened structure in the ground electronic state. In most other systems ground-state flattening is a solid-state effect induced by lattice forces. However, a flattening distortion is an intrinsic attribute of the emissive excited state, although intra- or intermolecular forces can inhibit the effect. In the case of the Cu(dptmp)2+ system, intramolecular steric interactions oppose flattening because the methyl groups in the 3,8 positions control the torsion angles of the neighboring phenyl groups. In the case of [Cu(tmp)2]BPh4, packing interactions induce a small flattening in the crystal, but they also constrain the degree of distortion that can occur in the excited state. As a consequence [Cu(tmp)2]BPh4 exhibits a weak photoluminescence in the solid phase (tau = 15 ns). This is the first report of emission from a bis(phenanthroline)copper(I) system that does not have bulky substituents in the 2 and/or 9 positions of the ligand. The [Cu(tmp)2]BPh4 system crystallizes in space group P2(1)/n with a = 17.4883(4) A, b = 9.86860(10) A, c = 26.3747(6) A, alpha = 90 degrees, beta = 97.7021(8) degrees, gamma = 90 degrees, V = 4510.8(3) A3, and Z = 4. For 12,948 unique data with Fo2 > 2 sigma(Fo2), R = 6.5%. The [Cu(dpdmp)2]PF6 system crystallizes in space group P2/n with a = 16.0722(13) A, b = 8.1100(7) A, c = 16.8937(10) A, alpha = 90 degrees, beta = 93.947(5) degrees, gamma = 90 degrees, V = 2196.8(5) A3, and Z = 2. For 2833 unique data with Fo2 > 2 sigma(Fo2), R = 6.0%. The [Cu(dptmp)2]PF6.THF system crystallizes in space group P1 with a = 12.8486(4) A, b = 13.7341(1) A, c = 15.1678(3) A, alpha = 99.5819(14) degrees, beta = 96.7263(13) degrees, gamma = 97.3311(12) degrees, V = 2591.3(2) A3, and Z = 2. For 13,753 unique data with Fo2 > 2 sigma(Fo2), R = 7.4%. Finally, the [Cu(dipp)2]TFPB system crystallizes in space group P1 with a = 14.2523(3) A, b = 16.0496(4) A, c = 17.5801(3) A, alpha = 112.4150(13) degrees, beta = 105.7480(13) degrees, gamma = 99.6078(11) degrees, V = 3408.7(3) A3, and Z = 2. For 8774 unique data with Fo2 > 2 sigma(Fo2), R = 9.3%.

Journal Article↗
PubMed2005

Ligand orientation control in low-spin six-coordinate (porphinato)iron(II) species.

The synthesis of a low-spin six-coordinate iron(II) porphyrinate in which the two axial ligands are forced to have a relative perpendicular orientation has been successfully accomplished for the first time. The reaction of four-coordinate (tetramesitylporphinato)iron(II) with 2-methylimidazole leads to the preparation of [Fe(TMP)(2-MeHIm)(2)] which cocrystallizes with five-coordinate [Fe(TMP)(2-MeHIm)]. The six-coordinate complex accommodates the sterically crowded pair of imidazoles with a strongly ruffled core and relative perpendicular orientation. This leads to shortened equatorial bonds of 1.963(6) A and slightly elongated axial Fe-N bond lengths of 2.034(9) A that are about 0.04 A shorter and 0.03 A longer, respectively, in comparison to those of the bis-imidazole-ligated iron(II) species with parallel oriented axial ligands. The Mossbauer spectrum shows a pair of quadrupole doublets that can be assigned to the components of the cocrystallized crystalline solid. High-spin five-coordinate [Fe(TMP)(2-MeHIm)] has DeltaE(Q) = 2.25 mm/s and delta = 0.90 mm/s at 15 K. The quadrupole splitting, DeltaE(Q), for [Fe(TMP)(2-MeHIm)(2)] is 1.71 mm/s, and the isomer shift is 0.43 mm/s at 15 K. The quadrupole splitting value is significantly larger than that found for low-spin iron(II) derivatives with relative parallel orientations for the two axial ligands. Mossbauer spectra thus provide a probe for ligand orientation when structural data are otherwise not available.

Crystallography, X-Ray↗
PubMed1996

Disproportionation of Iron(III) Porphyrin pi-Cation Radicals in the Presence of Sterically Hindered Pyridines. Spectroscopic Detection of Asymmetric Highly Oxidized Intermediates.

The reactivity of iron(III) tetraphenylporphyrin pi-cation radical (TPP(*))Fe(III)(ClO(4))(2), (1-1) iron(III) tetra-p-tolylporphyrin pi-cation radical (TTP(*))Fe(III)(ClO(4))(2) (1-2) and iron(III) tetramesitylporphyrin pi-cation radical (TMP(*))Fe(III)(ClO(4))(2) (1-3) complexes with 2,4,6-collidine, 2,3,6-collidine, 2-picoline, 2,6-di-tert-butylpyridine, and 2,6-dibromopyridine has been examined by (1)H NMR spectroscopy in dichloromethane-d(2) solution at low temperatures. These complexes undergo hydration processes which are essential in the generation of highly oxidized species via acid base/equilibria of coordinated water followed by disproportionation pathway, giving as sole stable products [(TPP(*))Fe(III)OFe(III)(TPP)](+) (4-1), [(TTP(*))Fe(III)OFe(III)(TTP)](+) (4-2), and (TMP)Fe(III)(OH) (6) respectively. The sterically hindered pyridines act as efficient proton scavengers. Two novel highly oxidized iron complexes have been detected by (1)H NMR spectroscopy after addition of 2,4,6-collidine to (TTP(*))Fe(III)(ClO(4))(2) or (TPP(*))Fe(III)(ClO(4))(2) in dichloromethane-d(2) solution at 202 K. New intermediates have been identified as iron porphyrin N-oxide complexes, i.e., iron(III) porphyrin N-oxide cation radical (2-n) and iron(IV) porphyrin N-oxide radical (3-n). The (1)H NMR results indicate that the D(4)(h)() symmetry of the parent iron(III) pi-cation radical is drastically reduced upon disproportionation in the presence of proton scavengers. Both species are very unstable and were observed from 176 to 232 K. The intermediate 2-2 has a (1)H NMR spectrum which demonstrates large hyperfine shifts (ppm) for the meso p-tolyl substituents (ortho 98.0, 94.8, 92.9, 91.7; meta -34.8, -38.7, -41.5, -42.3; p-CH(3) -86.3, -88.0) which are consistent with presence of an N-substituted iron porphyrin radical in the product mixture. The characteristic (1)H NMR spectrum of 2-2 includes six pyrrole resonances at 149.6, 118.2, 115.4, 88.3, 64.6, and 55.7 ppm at 202 K, i.e., in the positions corresponding to iron(III) high-spin porphyrins. On warming to 222 K, the pyrrole resonances broaden and then coalesce pairwaise. Such dynamic behavior is accounted for by a rearrangement mechanism which involves an inversion of the porphyrin puckering. The pattern of p-tolyl resonances revealed the cation radical electronic structure of 3-2. The p-tolyl resonances are divided in two distinct sets showing opposite direction of the isotropic shift for the same ring positions. The pyrrole resonances of 3-2 also demonstrated downfield and upfield shifts. A disproportionation mechanism of the hydrated iron porphyrin cation radicals to generate 2 and 3 has been proposed. Both intermediates react with triphenylphosphine to produce triphenylphosphine oxide and high-spin iron porphyrins. Addition of 2,4,6-collidine to (TMP(*))Fe(III)(ClO(4))(2) does not produce analogs of 2 and 3 found for sterically unprotected porphyrins. It results instead in the formation of a variety of X(TMP(*))Fe(IV)O (5) complexes also accounted for by the disproportionation process.

Journal Article↗
PubMed1998

Synthesis, Characterization, and Solid-State Molecular Structures of Nitrosoarene Complexes of Osmium Porphyrins.

The reactions of (por)Os(CO) (por = TPP, TTP, OEP, TMP) with nitrosoarenes (ArNO; Ar = Ph, o-tol) in refluxing toluene generate the (por)Os(ArNO)(2) complexes in 45-76% yields (TTP = 5,10,15,20-tetra-p-tolylporphyrinato dianion, TPP = 5,10,15,20-tetraphenylporphyrinato dianion, OEP = 2,3,7,8,12,13,17,18-octaethylporphyrinato dianion, TMP = 5,10,15,20-tetramesitylporphyrinato dianion). The nu(NO) of the coordinated PhNO groups in the (por)Os(PhNO)(2) complexes occur in the 1295-1276 cm(-)(1) range, and decrease slightly in the order TPP (1295 cm(-)(1)) > TTP (1291 cm(-)(1)) > OEP (1286 cm(-)(1)) > TMP (1276 cm(-)(1)). The reaction of (TTP)Os(CO) with 1 equiv of PhNO in CH(2)Cl(2) at room temperature generates a 1:3 mixture of (TTP)Os(CO)(PhNO) and (TTP)Os(PhNO)(2) in ca. 40% isolated yield. The nu(CO) of (TTP)Os(CO)(PhNO) is at 1972 cm(-)(1) (KBr), which is 56 cm(-)(1) higher in energy than that of the precursor (TTP)Os(CO). When this mixture and excess PhNO are dissolved in toluene and the solution is heated to reflux, quantitative conversion to the (TTP)Os(PhNO)(2) product occurs. IR monitoring of the reactions of (por)Os(CO) with 1 equiv of PhNO in CH(2)Cl(2) reveal similar formations of the respective (por)Os(CO)(PhNO) intermediates for the TTP (1968 cm(-)(1); Deltanu(CO) = +74 cm(-)(1)), TMP (1966 cm(-)(1); Deltanu(CO) = +63 cm(-)(1)), and OEP (1958 cm(-)(1); Deltanu(CO) = +72 cm(-)(1)) analogues. Five of these (por)Os(ArNO)-containing complexes have been fully characterized by spectroscopic methods and by single-crystal X-ray crystallography. All the nitrosoarene ligands in these complexes are attached to the formally Os(II) centers via an eta(1)-N binding mode.

Journal Article↗
PubMed2004

Light-directed radial combinatorial chemistry: orthogonal safety-catch protecting groups for the synthesis of small molecule microarrays.

We describe the development of photolabile protecting groups based on the 3,4,5-trimethoxyphenacyl group (TMP). Orthogonal safety-catches were created by introducing an acid-activatible dimethyl ketal (AA-TMP) and an oxidatively activatible 1,3-dithiane (OA-TMP) into the photolabile TMP group. We demonstrate the application of these protecting groups in light-directed synthesis of small molecule microarrays with diversity elements radially attached to a hydroxyproline scaffold.

Acetophenones↗
PubMed1995

2,4-Diaminopyrido[3,2-d]pyrimidine inhibitors of dihydrofolate reductase from Pneumocystis carinii and Toxoplasma gondii.

Six previously unknown 2,4-diamino-6-(anilinomethyl)- and 2,4-diamino-6-[(N-methylanilino)-methyl]pyrido[3,2-d]pyrimidines (5-10) were synthesized from 2,4-diamino-6-(bromomethyl)-pyrido[3,2-d]pyrimidine hydrobromide (11.HBr) by treatment with the appropriate aniline or N-methylaniline in dimethylformamide at room temperature, with or without NaHCO3 present. Compounds 5-10 were tested as inhibitors of dihydrofolate reductase from Pneumocystis carinii, Toxoplasma gondii, and rat liver as a part of a larger effort directed toward the discovery of lipophilic nonclassical antifolates combining high enzyme selectivity and high potency. Of the six analogues tested, the most potent and selective against T. gondii DHFR was 2,4-diamino-6-[(3',4',5'-trimethoxy-N-methylanilono)methyl]pyrido[ 3,2-d d pyrimidine (7), which had an IC50 of 0.0047 microM against this enzyme as compared with 0.026 microM against the rat liver enzyme. The potency of 7 against T. gondii DHFR was similar to that of trimetrexate (TMQ, 1) and piritrexim (PTX, 2) but was > 500-fold greater than that of trimethoprim (TMP, 3). However, while 7 was more selective than either TMQ (19x) or PTX (63x) against this enzyme, its selectivity in comparison with TMP was 8-fold lower. 2,4-Diamino-6-[3',4',5'-trimethoxyanilino)methyl]pyrido[3,2-d]pyri midin e (6) was 17-fold less active than 7 and was also less selective. 2,4-Diamino-6-[(3',4'-dichloro-N-methylanilino)methyl]pyrido[3, 2-d]pyrimidine (10) had an IC50 of 0.022 microM against P. carinii DHFR and was comparable in potency to TMQ and PTX. The species selectivity of 10 for P. carinii versus rat liver DHFR was greater than that of either TMQ (21-fold) or PTX (31-fold). On the other hand, even though 10 was slightly more active than TMQ against the P. carinii enzyme, its selectivity was 7-fold lower than that of TMP. Thus, the goal of combining high enzyme binding activity, which is characteristic of the fused-ring compounds TMQ and PTX, with high selectivity for T. gondii and P. carinii DHFR versus rat liver DHFR, which is characteristic of the monocyclic compound TMP, remained unmet in this limited series.

Animals↗
PubMed1985

Receptor-based design of dihydrofolate reductase inhibitors: comparison of crystallographically determined enzyme binding with enzyme affinity in a series of carboxy-substituted trimethoprim analogues.

By the use of molecular models of Escherichia coli dihydrofolate reductase (DHFR), analogues of trimethoprim (TMP) were designed which incorporated various 3'-carboxyalkoxy moieties in order to acquire ionic interactions with positively charged active-site residues. Certain of these compounds have shown exceptionally high affinity for this enzyme. For example, the 3'-(carboxypentyl)oxy analogue was found to be 55-fold more inhibitory than TMP toward E. coli DHFR (Ki = 0.024 nM vs. 1.32 nM for TMP). X-ray crystallographic studies of E. coli DHFR in binary complexes with TMP and two members of this acid-containing series of compounds defined the binding of these inhibitors and showed the carboxyl group of the latter two inhibitors to be ionically bound to Arg-57. These observations were in agreement with postulated binding modes that were based on receptor modeling.

Binding Sites↗
PubMed2005

Design, synthesis, and antifolate activity of new analogues of piritrexim and other diaminopyrimidine dihydrofolate reductase inhibitors with omega-carboxyalkoxy or omega-carboxy-1-alkynyl substitution in the side chain.

As part of a search for dihydrofolate reductase (DHFR) inhibitors combining the high potency of piritrexim (PTX) with the high antiparasitic vs mammalian selectivity of trimethoprim (TMP), the heretofore undescribed 2,4-diamino-6-(2',5'-disubstituted benzyl)pyrido[2,3-d]pyrimidines 6-14 with O-(omega-carboxyalkyl) or omega-carboxy-1-alkynyl groups on the benzyl moiety were synthesized and tested against Pneumocystis carinii, Toxoplasma gondii, and Mycobacterium avium DHFR vs rat DHFR. Three N-(2,4-diaminopteridin-6-yl)methyl)-2'-(omega-carboxy-1-alkynyl)dibenz[b,f]azepines (19-21) were also synthesized and tested. The pyridopyrimidine with the best combination of potency and selectivity was 2,4-diamino-5-methyl-6-[2'-(5-carboxy-1-butynyl)-5'-methoxy]benzyl]pyrimidine (13), with an IC(50) value of 0.65 nM against P. carinii DHFR, 0.57 nM against M. avium DHFR, and 55 nM against rat DHFR. The potency of 13 against P. carinii DHFR was 20-fold greater than that of PTX (IC(50) = 13 nM), and its selectivity index (SI) relative to rat DHFR was 85, whereas PTX was nonselective. The activity of 13 against P. carinii DHFR was 20 000 times greater than that of TMP, with an SI of 96, whereas that of TMP was only 14. However 13 was no more potent than PTX against M. avium DHFR, and its SI was no better than that of TMP. Molecular modeling dynamics studies using compounds 10 and 13 indicated a slight binding preference for the latter, in qualitative agreement with the IC(50) data. Among the pteridines, the most potent against P. carinii DHFR and M. avium DHFR was the 2'-(5-carboxy-1-butynyl)dibenz[b,f]azepinyl derivative 20 (IC(50) = 2.9 nM), whereas the most selective was the 2'-(5-carboxy-1-pentynyl) analogue 21, with SI values of >100 against both P. carinii and M. avium DHFR relative to rat DHFR. The final compound, 2,4-diamino-5-[3'-(4-carboxy-1-butynyl)-4'-bromo-5'-methoxybenzyl]pyrimidine (22), was both potent and selective against M. avium DHFR (IC(50) = 0.47 nM, SI = 1300) but was not potent or selective against either P. carinii or T. gondii DHFR.

Animals↗
PubMed1997

Conformationally restricted analogues of trimethoprim: 2,6-diamino-8-substituted purines as potential dihydrofolate reductase inhibitors from Pneumocystis carinii and Toxoplasma gondii.

Twenty-two 2,6-diamino-8-substituted purines (2-23) were synthesized, in which rotation around the two flexible bonds of trimethoprim (TMP), linking the pyrimidine ring to the side chain phenyl ring, was restricted by incorporation into a purine ring, in an attempt to increase the potency and selectivity of TMP against dihydrofolate reductase (DHFR) from the organisms that often cause fatal opportunistic infections in patients with AIDS, i.e., Pneumocystis carinii (pc) and Toxoplasma gondii (tg). The syntheses of analogues 2-20 were achieved via a one-pot reaction of 2,4,5,6-tetraaminopyrimidine and the appropriately substituted benzaldehyde or phenyl acetaldehyde, in acidic methoxyethanol. Analogues 21-23 were synthesized via nucleophilic displacement of 2,6-diamino-8-(chloromethyl)purine with the appropriate anilines or 2-naphthalenethiol. The compounds were evaluated as inhibitors of pcDHFR and tgDHFR with rat liver (rl) DHFR as the mammalian reference enzyme. Compound 11, the 3',4'-dichlorophenyl analogue, was as potent as TMP and had a selectivity ratio of 13 for pcDHFR, which ranked it as one of the three most selective inhibitors of pcDHFR (compared to rlDHFR) known to date. It also displayed a selectivity ratio of 38 for tgDHFR. None of the other analogues showed any improvement compared to TMP in potency or selectivity. In the preclinical in vitro screening program of the National Cancer Institute, compound 11 showed a GI50 of 10(-6) M for the inhibition of the growth of 17 tumor cell lines.

AIDS-Related Opportunistic Infections↗
PubMed1998

2,4-Diamino-6,7-dihydro-5H-cyclopenta[d]pyrimidine analogues of trimethoprim as inhibitors of Pneumocystis carinii and Toxoplasma gondii dihydrofolate reductase.

Three previously unreported (R,S)-2,4-diamino-5-[(3,4,5-trimethoxyphenyl) alkyl]-6,7-dihydro-5H-cyclopenta[d]pyrimidines 15a-c were synthesized as analogues of trimethoprim (TMP) and were tested as inhibitors of Pneumocystis carinii, Toxoplasma gondii, and rat liver dihydrofolate reductase (DHFR). The length of the alkyl bridge between the cyclopenta[d]pyrimidine and trimethoxyphenyl moiety ranged from one in 15a to three carbons in 15c. The products were tested as competitive inhibitors of the reduction of dihydrofolate by Pneumocystis carinii, Toxoplasma gondii, and rat liver DHFR. Compounds 15a-c had IC50 values of > 32, 1.8 and 1.3 microM, respectively, against P. carinii DHFR, as compared to 12 microM for TMP. Against the T. gondii enzyme, 15a-c had IC50 values of 21, 0.14 and 0.14 microM, respectively, as compared to 2.7 microM for TMP. Inhibitors 15b and 15c with two- and three-carbon bridges were significantly more potent than 15a against all three enzymes. Unlike TMP, 15b and 15c were better inhibitors of the rat liver enzyme than of the microbial enzymes. The potency of 15b and 15c against rat liver DHFR was less than has been reported for the corresponding 6,7-dihydro-5H-cyclopenta[d]pyrimidines with a classical p-aminobenzoyl-L-glutamate side chain as inhibitors of bovine, murine, and human DHFR.

Animals↗
PubMedDate not supplied

The enzymatic formation and chemical reactivity of quinone methides correlate with alkylphenol-induced toxicity in rat hepatocytes.

The effects of o-alkyl substituents on both the cytochrome P450-catalyzed oxidation of phenols to p-quinone methides (QM's; 4-methylene-2,5-cyclohexadien-1-ones), and on the rates of nucleophilic additions to the 4-methylene carbon of QM's were investigated. The derivatives of 4-methylphenol studied were BHT (2,6-di-tert-butyl), BHTOH [6-tert-butyl-2-(hydroxy-tert-butyl)], BDMP (2-tert-butyl-6-methyl), BMP (2-tert-butyl), TMP (2,6-dimethyl), and DMP (2-methyl). QM formation was estimated to be in the range 0.17-0.70 nmol/(nmol of P450.min) in rat liver microsomes and 16-62 pmol/(10(6) cells.min) in isolated rat hepatocytes. QM's derived from BHT (BHT-QM), BHTOH (BHTOH-QM), BDMP (BDMP-QM), and TMP (TMP-QM) were synthesized and their rates of reaction with water and reduced glutathione (GSH) determined. BDMP-QM and TMP-QM were the most reactive, BHT-QM was consumed relatively slowly, and BHTOH-QM displayed intermediate reactivity. These variations in rate were rationalized by differences in hydrogen bonding with the carbonyl oxygen, which affects positive charge density at the site of nucleophilic attack. The loss of hepatocyte viability during incubations with BMP, BDMP, and BHTOH was preceded by GSH depletion. Pretreatment of hepatocytes with diethyl maleate exacerbated alkylphenol toxicity, and metyrapone protected the cells. These data, together with information on the formation and reactivity of QM's, strongly support the proposal that QM's mediate the toxicity of alkylated 4-methylphenols in rat hepatocytes.

Animals↗
PubMed1999

Influence of crystal habit on trimethoprim suspension formulation.

PURPOSE: The role of crystal habit in influencing the physical stability and pharmacokinetics of trimethoprim suspensions was examined. METHODS: Different habits for trimethoprim (TMP) were obtained by recrystallizing the commercial sample (PD) utilizing solvent-change precipitation method. Four distinct habits (microscopic observation) belonging to the same polymorphic state (DSC studies) were selected for studies. Preformulation and formulation studies were carried out on suspension dosage forms containing these crystals. The freshly prepared suspensions were also evaluated for their pharmacokinetic behaviour on healthy human volunteers using a cross over study. RESULTS: Variation of crystallization conditions produces different habits of TMP. Among the different crystal habits exhibiting same polymorphic state, the most anisometric crystal showed best physical stability in terms of sedimentation volume and redispersibility. However, habit did not significantly affect the extent of TMP excreted in urine. CONCLUSIONS: Modification of surface morphology without significantly altering the polymorphic state can be utilized for improving physical stability of TMP suspensions. However, the pharmacokinetic profile remains unaltered.

Adult↗
PubMed2004

Overproduction of thymidine by recombinant brevibacterium helvolum amplified with thymidine monophosphate phosphohydrolase gene from bacteriophage PBS2.

A microbial fermentation process could be used to produce thymidine biologically but many of the enzymes related to nucleotide biosynthesis are highly regulated. To overcome the complex regulation steps, an analogue mutant of Brevibacterium helvolum resistant to fluorouracil, hydroxyurea, and trimethoprim was constructed. This mutant accumulated 380 mg thymidine 1(-1) in 16 h in shake-flask culture. However, the accumulation of thymidine monophosphate (TMP) inside the cells suggested a low activity of nucleotidase which degrades TMP to thymidine. This limitation was overcome by cloning the TMP phosphohydrolase (TMPase) gene of the unusual bacteriophage, PBS2. As a result, TMP in recombinant cells decreased from 230 micromol g(-1) cell to 20 micromol g(-1) cell with accumulation of 500 mg thymidine l(-1) in the medium.

Bacterial Proteins↗