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PubMed1980

Investigations into the effect of acid on the spectral and kinetic properties of purple membrane from Halobacterium halobium.

The formation and reversal of the acid species of purple membrane generated below pH 4.00 (22 degrees C) is studied together with the photochemical cycle over the pH range 6.40--3.20. The buffering capacity of the membrane reaches a peak at pH 4.30, indicating the possibility of a conformational change taking place. The generation of the new spectral species can take place in the dark and is unaffected by the addition of reducing agents. Kinetic parameters measured indicate that the group being titrated below pH 4.00 could be the same as that protonated in the formation of intermediate O. The temporal placement of intermediate O after M in the photochemical cycle is shown to be incompatible with the data presented here. Reneutralization of acidified purple membrane shows that the spectral changes in acid are reversible but the phototransient properties are altered.

Bacteriorhodopsins↗
PubMed2000

Role of flagellins from A and B loci in flagella formation of Halobacterium salinarum.

Haloarchaeal flagella are composed of a number of distinct flagellin proteins, specified by genes in two separate operons (A and B). The roles of these flagellins were assessed by studying mutants of H. salinarum with insertions in either the A or the B operon. Cells of the flgA- mutant produced abnormally short, curved flagella that were distributed all over the cell surface. The flgA2- strain produced straight flagella, mainly found at the poles. The flgB- mutant had flagella of the same size and spiral shape as wild-type cells, but these cells also showed unusual outgrowths, which appeared to be sacs filled with basal body-like structures. In broth cultures of this mutant, the medium accumulated flagella with basal body-like structures at their ends.

Base Sequence↗
PubMed2000

On the kinetics of voltage formation in purple membranes of Halobacterium salinarium.

The kinetics of the bacteriorhodopsin photocycle, measured by voltage changes in a closed membrane system using the direct electrometrical method (DEM) of Drachev, L.A., Jasaitus, A.A., Kaulen, A.D., Kondrashin, A.A., Liberman, E.A., Nemecek, I.B., Ostroumov, S.A., Semenov, Yu, A. & Skulachev, V.P. (1974) Nature 249, 321-324 are sixfold slower than the kinetics obtained in optical studies with suspensions of purple membrane patches. In this study, we have investigated the reasons for this discrepancy. In the presence of the uncouplers carbonyl cyanide m-chlorophenylhydrazone or valinomycin, the rates in the DEM system are similar to the rates in suspensions of purple membrane. Two alternative explanations for the effects of uncouplers were evaluated: (a) the 'back-pressure' of the Deltamicro;H+ slows the kinetic steps leading to its formation, and (b) the apparent difference between the two systems is due to slow major electrogenic events that produce little or no change in optical absorbance. In the latter case, the uncouplers would decrease the RC time constant for membrane capacitance leading to a quicker discharge of voltage and concomitant decrease in photocycle turnover time. The experimental results show that the primary cause for the slower kinetics of voltage changes in the DEM system is thermodynamic back-pressure as described by Westerhoff, H.V. & Dancshazy, Z. (1984) Trends Biochem. Sci. 9, 112-117.

Bacteriorhodopsins↗
PubMed1992

Nonrandom structures in the locomotor behavior of Halobacterium: a bifurcation route to chaos?

Halobacteria spontaneously reverse their swimming direction about every 10-15 s. They respond to light stimuli by a transient perturbation of this rhythm. During periodic stimulation the system shows features that are known from nonlinear oscillators. Increasing stimulation frequencies cause the following phenomena: (i) the frequency of reversals follows the stimulation frequency, (ii) transition to a state where a long and a short interval occur alternatingly and further transition to four interval lengths, (iii) appearance of irregular interval sequences, which, in a two-dimensional plot of successive intervals, reveal clearly discernible structures and suggest chaotic motion. A similar series of events can be induced in the absence of periodic stimulation, when a control parameter is changed to various constant levels. The data suggest that the system is governed by deterministic dynamical laws.

1-Methyl-3-isobutylxanthine↗
PubMed2002

Changes in the retinal transition dipole moment in bacteriorhodopsin of the purple membrane of Halobacterium Salinarium at the so-called PH(rev).

The chromophore transition dipole moment of light-adapted wild-type bacteriorhodopsin (WT-bR) in suspension is evaluated for pH range of 2.8-12. Significant variations in the transition dipole moment are observed at the so-called pH(rev). The results have reported a value of 11 and 8.5 Debye for chromophore transition dipole moment of the neutral purple and acid blue form of bacteriorhodopsin, respectively. There may be a correlation with the process of reversing the direction of the permanent electric dipole moment, due to the reversal of the surface charge asymmetry, of the purple membrane to its opposite side at that pH(rev).

Bacteriorhodopsins↗
PubMed1967

A morphological study of Halobacterium halobium and its lysis in media of low salt concentration.

The reported absence of a cell wall in halobacteria cannot be confirmed. Improved fixation techniques clearly show a cell wall-like structure on the surface of these cells. A stepwise reduction of the salt concentration causes the release of cell wall material before the cell membrane begins to disintegrate. The cell membrane breaks up into fragments of variable but rather small size, which are clearly different from a 4S component reported by others to be the major breakdown product of the cell membrane. It appears more likely that the 4S component arises from the dissolution of the cell wall. A residue of large membranous sheets remains even after prolonged exposure of halobacteria envelopes to distilled water. The lipids in these sheets do not differ significantly from the lipids in the lysed part of the cell membrane. The sheets, however, contain a purple-colored substance, which is not present in the lysed part. The easily sedimentable residue that remains after lysis of the cells or envelopes in distilled water also contains "intracytoplasmic membranes" with unusual structural characteristics. They can also be identified in sections through intact bacteria or envelope preparations. Their function is at present unknown but seems to be related to the formation of gas vacuoles in these organisms.

Bacteriolysis↗
PubMed1984

Characterization of insertions affecting the expression of the bacterio-opsin gene in Halobacterium halobium.

We have determined the sequence of the inverted repeats and duplicated target DNA of the halobacterial insertion elements ISH2 (520 bp), ISH23 (900 bp) and ISH24 (3000 bp) associated with bacterio-opsin (bop) mutants. ISH2 has a perfect 19 bp inverted repeat (3,5), while both ISH23 and ISH24 have imperfect inverted repeats of 29 bp and 14 bp respectively. ISH23 was shown to be highly homologous to ISH50 (6). Variable lengths of duplicated target DNA are found when ISH2 and ISH23 (ISH50) transpose into different sites. A 550 bp DNA insert ("ISH25") reverts the Bop mutation caused by ISH24. "ISH25" lacks typical structural features of a transposable element. "ISH25" and ISH24 are found adjacent to each other upstream of the bop gene. An identical arrangement of "ISH25" and ISH24 is found in the cccDNA of H. halobium NRC817. Comparative sequence analysis of both areas suggests that the translocation of "ISH25" to the bop gene region occurred by a recombination event.

Bacteriorhodopsins↗
PubMed1988

Complex promoter pattern of the single ribosomal RNA operon of an archaebacterium Halobacterium halobium.

The transcription of the single ribosomal RNA gene cluster is initiated at an assemblage of promoters five of which were previously mapped in the 910 base pair region in front of the 16S rRNA gene. The nucleotide sequence between positions -1680 and -910 was determined and S1 nuclease mapping revealed therein two sites corresponding to the 5' ends of the primary transcripts. These two presumably represent the most distal promoters, P1 and P2, of the operon, P1 being separated from the 16S rRNA gene by more than 1250 bp. An additional putative "internal" promoter located within the operon body in the 16S/23S intergenic spacer was revealed by S1 nuclease mapping. A 528 bp long open reading frame is co-transcribed with the rRNA genes from the P1 promoter. Its possible functional implication is discussed.

Base Sequence↗