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PubMed2004

Agostic interactions and dissociation in the first layer of water on Pt(111).

Recent quantum mechanical (QM) calculations for a monolayer of H(2)O on Ru(0001) suggested a novel stable structure with half the waters dissociated. However, different studies on Pt(111) suggested an undissociated bilayer structure in which the outer half of the water has the OH bonds toward the surface rather than the O lone pair. Since water layers on Pt are important in many catalytic processes (e.g., the fuel cell cathode), we calculated the energetics and structure of the first monolayer of water on the Pt(111) surface using QM [periodic slab using density functional calculations (DFT) with the PBE-flavor of exchange-correlation functional]. We find that the fully saturated surface ((2)/(3) ML) has half the water almost parallel to the surface (forming a Pt-O Lewis acid-base bond), whereas the other half are perpendicular to the surface, but with the H down toward the surface (forming a Pt-HO agostic bond). This leads to a net bond energy of 0.60 eV/water = 13.8 kcal/mol (the standard ice model with the H up configuration of the water molecules perpendicular to the surface is less stable by 0.092 eV/water = 2.1 kcal/mol). We examined whether the partial dissociation of water proposed for Ru(0001) could occur on Pt(111). For the saturated water layer ((2)/(3) ML) we find a stable structure with half the H(2)O dissociated (forming Pt-OH and Pt-H covalent bonds), which is less favorable by only 0.066 eV/water = 1.51 kcal/mol. These results confirm the interpretation of combined experimental (XAS, XES, XPS) and theoretical (DFT cluster and periodic including spectrum calculations) studies, which find only the H down undissociated case. We find that the undissociated structure leads to a vertical displacement between the two layers of oxygens of approximately 0.42 A (for both H down and H up). In contrast, the partially dissociated system leads to a flat structure with a separation of the oxygen layers of 0.08 A. Among the partially dissociated systems, we find that all subsurface positions for the dissociated hydrogen are less favorable than adsorbing on top of the free Pt surface atom. Our results suggest that for less than (1)/(3) ML, clustering would be observed rather than ordered monolayer structures.

Models, Molecular↗

PubMed1996

Blackbody infrared radiative dissociation of bradykinin and its analogues: energetics, dynamics, and evidence for salt-bridge structures in the gas phase.

Blackbody infrared radiative dissociation (BIRD) spectra of singly and doubly protonated bradykinin and its analogues are measured in a Fourier-transform mass spectrometer. Rate constants for dissociation are measured as a function of temperature with reaction delays up to 600 s. From these data, Arrhenius activation parameters in the zero-pressure limit are obtained. The activation parameters and dissociation products for the singly protonated ions are highly sensitive to small changes in ion structure. The Arrhenius activation energy (E(a)) and pre-exponential (or frequency factor, A) of the singly protonated ions investigated here range from 0.6 to 1.4 eV and 10(5) to 10(12) s(-1), respectively. For bradykinin and its analogues differing by modification of the residues between the two arginine groups on either end of the molecule, the singly and doubly protonated ions have average activation energies of 1.2 and 0.8 eV, respectively, and average A values of 10(8) and 10(12) s(-1), respectively, i.e., the presence of a second charge reduces the activation energy by 0.4 eV and decreases the A value by a factor of 10(4). This demonstrates that the presence of a second charge can dramatically influence the dissociation dynamics of these ions. The doubly protonated methyl ester of bradykinin has an E(a) of 0.82 eV, comparable to the value of 0.84 eV for bradykinin itself. However, this value is 0.21 +/- 0.08 eV greater than that of singly protonated methyl ester of bradykinin, indicating that the Coulomb repulsion is not the most significant factor in the activation energy of this ion. Both singly and doubly protonated Lys-bradykinin ions have higher activation energies than the corresponding bradykinin ions indicating that the addition of a basic residue stabilizes these ions with respect to dissociation. Methylation of the carboxylic acid group of the C-terminus reduces the E(a) of bradykinin from 1.3 to 0.6 eV and the A factor from 1012 to 105 s(-1). This modification also dramatically changes the dissociation products. Similar results are observed for [Ala(6)]-bradykinin and its methyl ester. These results, in combination with others presented here, provide experimental evidence that the most stable form of singly protonated bradykinin is a salt-bridge structure.

Journal Article↗

PubMed1998

Activation energies for dissociation of double strand oligonucleotide anions: evidence for watson-crick base pairing in vacuo.

The dissociation kinetics of a series of complementary and noncomplementary DNA duplexes, (TGCA)(2) (3-), (CCGG)(2) (3-), (AATTAAT)(2) (3-), (CCGGCCG)(2) (3-), A(7)*T(7) (3-), A(7)*A(7) (3-), T(7)*T(7) (3-), and A(7)*C(7) (3-) were investigated using blackbody infrared radiative dissociation in a Fourier transform mass spectrometer. From the temperature dependence of the unimolecular dissociation rate constants, Arrhenius activation parameters in the zero-pressure limit are obtained. Activation energies range from 1.2 to 1.7 eV, and preexponential factors range from 10(13) to 10(19) s(-1). Dissociation of the duplexes results in cleavage of the noncovalent bonds and/or cleavage of covalent bonds leading to loss of a neutral nucleobase followed by backbone cleavage producing sequence-specific (a - base) and w ions. Four pieces of evidence are presented which indicate that Watson-Crick (WC) base pairing is preserved in complementary DNA duplexes in the gas phase: i. the activation energy for dissociation of the complementary dimer, A(7)*T(7) (3-), to the single strands is significantly higher than that for the related noncomplementary A(7)*A(7) (3-) and T(7)*T(7) (3-) dimers, indicating a stronger interaction between strands with a specific base sequence, ii. extensive loss of neutral adenine occurs for A(7)*A(7) (3-) and A(7)*C(7) (3-) but not for A(7)*T(7) (3-) consistent with this process being shut down by WC hydrogen bonding, iii. a correlation is observed between the measured activation energy for dissociation to single strands and the dimerization enthalpy (-DeltaH(d)) in solution, and iv. molecular dynamics carried out at 300 and 400 K indicate that WC base pairing is preserved for A(7)*T(7) (3-) duplex, although the helical structure is essentially lost. In combination, these results provide strong evidence that WC base pairing can exist in the complete absence of solvent.

Journal Article↗

PubMed2005

Ionic diffusion and salt dissociation conditions of lithium liquid crystal electrolytes.

Salt dissociation conditions and dynamic properties of ionic species in liquid crystal electrolytes of lithium were investigated by a combination of NMR spectra and diffusion coefficient estimations using the pulsed gradient spin-echo NMR techniques. Activation energies of diffusion (Ea) of ionic species changed with the phase transition of the electrolyte. That is, Ea of the nematic phase was lower than that of the isotropic phase. This indicates that the aligned liquid crystal molecules prepared efficient conduction pathways for migration of ionic species. The dissociation degree of the salt was lower compared with those of the conventional electrolyte solutions and polymer gel electrolytes. This is attributed to the low concentration of polar sites, which attract the dissolved salt and promote salt dissociation, on the liquid crystal molecules. Furthermore, motional restriction of the molecules due to high viscosity and molecular oriented configuration in the nematic phase caused inefficient attraction of the sites for the salt. With a decreased dissolved salt concentration of the liquid crystal electrolyte, salt dissociation proceeded, and two diffusion components attributed to the ion and ion pair were detected independently. This means that the exchange rate between the ion and the ion pair is fairly slow once the salt is dissociated in the liquid crystal electrolytes due to the low motility of the medium molecules that initiate salt dissociation.

Journal Article↗

PubMed2006

A DFT study of the adsorption and dissociation of CO on sulfur-precovered Fe100.

Sulfur is known to be a poison to several catalytic reactions, e.g., the Fischer-Tropsch synthesis (FTS), in which it affects drastically the performance of both iron- and cobalt-based catalysts. However, despite the importance of this industrial process, little is known about what elementary steps are poisoned by sulfur. In the present article, we report, using density functional theory, the effect of sulfur on one of the most relevant reactions in the FTS: the dissociation of carbon monoxide over iron surfaces. We have studied the adsorption and dissociation of CO on Fe(100)-S-p(2 x 2) (theta(S) = 0.25 ML) and on Fe(100)-S-c(2 x 2) (theta(S) = 0.50 ML). We have found surface configurations that correlate well with the desorption features observed in temperature-programmed desorption mass spectroscopy. In addition, we have calculated the activation energy of CO dissociation on Fe(100)-S-p(2 x 2), which, interestingly, is very similar to the activation energy of CO dissociation on the sulfur-free Fe(100) surface. However, the sign of the reaction changes by the presence of sulfur; CO dissociation is highly exothermic on the sulfur-free Fe(100) surface, whereas on the Fe(100)-S-p(2 x 2) surface, it is slightly endothermic. Moreover, according to our results, the influence of sulfur in the CO dissociation seems to be short-ranged.

Adsorption↗

PubMed2006

Thermochemistry and dissociative photoionization of Si(CH3)4, BrSi(CH3)3, ISi(CH3)3, and Si2(CH3)6 studied by threshold photoelectron-photoion coincidence spectroscopy.

Threshold photoelectron-photoion coincidence spectroscopy (TPEPICO) has been used to study the dissociation kinetics and thermochemistry of Me(4)Si, Me(6)Si(2), and Me(3)SiX, (X = Br, I) molecules. Accurate 0 K dissociative photoionization onsets for these species have been measured from the breakdown diagram and the ion time-of-flight distribution, both of them analyzed and simulated in terms of the statistical RRKM theory and DFT calculations. The average enthalpy of formation of trimethylsilyl ion, Delta fH(o)298K(Me(3)Si(+)) = 617.3 +/- 2.3 kJ/mol, has been determined from the measured onsets for methyl loss (10.243 +/- 0.010 eV) from Me(4)Si, and Br and I loss from Me(3)SiBr (10.624 +/- 0.010 eV) and Me(3)SiI (9.773 +/- 0.015 eV), respectively. The methyl loss onsets for the trimethyl halo silanes lead to Delta fH(o)298K(Me(2)SiBr(+)) = 590.3 +/- 4.4 kJ/mol and Delta fH(o)298K(Me(5)Si(2)(+)) = 487.6 +/- 6.2 kJ/mol. The dissociative photoionization of Me(3)SiSiMe(3) proceeds by a very slow Si-Si bond breaking step, whose rate constants were measured as a function of the ion internal energy. Extrapolation of this rate constant to the dissociation limit leads to the 0 K dissociation onset (9.670 +/- 0.030 eV). This onset, along with the previously determined trimethylsilyl ion energy, leads to an enthalpy of formation of the trimethylsilyl radical, Delta fH(o)298K(Me(3)Si(*)) = 14.0 +/- 6.6 kJ/mol. In combination with other experimental values, we propose a more accurate average value for Delta fH(o)298K(Me(3)Si(*)) of 14.8 +/- 2.0 kJ/mol. Finally, the bond dissociation enthalpies (DeltaH(298K)) Si-H, Si-C, Si-X (X=Cl, Br, I) and Si-Si are derived and discussed in this study.

Journal Article↗

PubMed2006

First-principles study on proton dissociation properties of fluorocarbon- and hydrocarbon-based membranes in low humidity conditions.

We present a theoretical study on the proton dissociation properties of the membranes for polymer electrolyte fuel cells. A density functional theory method is used to study the influence of fluorocarbon and hydrocarbon backbones on proton dissociation, the interaction of water molecules with the sulfonic acid group, and the energy barriers for proton dissociation. Better proton dissociation properties of CH(3)SO(3)H compared to CF(3)SO(3)H are observed from statistical analyses of the optimized structures for both systems. However, the calculated energy barriers for proton dissociation are lower for CF(3)SO(3)H than for the CH(3)SO(3)H system. At the same time, the interaction of water molecules is stronger for CH(3)SO(3)H than for CF(3)SO(3)H. Also, the analysis of the hydrogen-bonding network in both systems shows that the number of hydrogen bonds formed around the sulfonic acid group in CH(3)SO(3)H is larger than that in CF(3)SO(3)H. Therefore, the decrease of the energy barrier with increasing number of coordinating water molecules, pronounced in the case of CH(3)SO(3)H, may lower the barrier, which enhances good proton conductivity of a hydrocarbon-based polymer in low humidity conditions. Thus the hydration ability of a sulfonic acid group is an important factor for realizing better proton dissociation in low humidity conditions.

Journal Article↗

PubMed1997

SK&F 97426-A: a novel bile acid sequestrant with higher affinities and slower dissociation rates for bile acids in vitro than cholestyramine.

SK&F 97426-A is a novel bile acid sequestrant that is threefold more potent than cholestyramine at increasing bile acid excretion in the hamster. SK&F 97426-A is a quaternary alkylammonium polymethacrylate that was selected for comparison with cholestyramine in vivo because of its superior in vitro bile acid binding properties. Association, dissociation, affinity, and capacity experiments were performed under physiologically relevant conditions with the most abundant bile acids found in human bile. The bile acids came to equilibrium with SK&F 97426-A and cholestyramine within approximately 30 min and 6 min, respectively. SK&F 97426-A and cholestyramine had similar capacities for all the bile acids (between 2.5 and 4 mmol/g) and both had similar, very high affinities and slow dissociation rates for the dihydroxy bile acids. However, SK&F 97426-A had much higher affinities for the trihydroxy bile acids glycocholic acid and taurocholic acid than did cholestyramine. Dissociation of glycocholic acid and taurocholic acid from SK&F 97426-A was also much slower (27 and 25%, respectively, dissociated after 60 min) than from cholestyramine (89 and 84%, respectively, dissociated after 60 min). The higher affinities and slower dissociation rates of the trihydroxy bile acids for and from SK&F 97426-A probably account for the increased potency of SK&F 97426-A over cholestyramine in vivo.

Animals↗

PubMed1999

Troponin C regulates the rate constant for the dissociation of force-generating myosin cross-bridges in cardiac muscle.

It is well known that cardiac troponin C (cTnC) regulates the association of force-generating myosin cross-bridges. We report here evidence for an additional role for cTnC. This hypothesis states that Ca2+ binds more strongly to cTnC when force-generating myosin cross-bridges are attached to actin and that removal of this bound Ca2+ accelerates the dissociation of force-generating myosin cross-bridges. Intact Fura-2-loaded rat papillary muscles and skinned (permeabilized) ventricular preparations were used. The preparations were mounted in the Guth Muscle Research System which is capable of measuring simultaneously fluorescence and force in response to length perturbations. All mechanical perturbations of muscle length (isotonic shortening, quick stretches and releases, and length vibrations) which cause dissociation of force-generating myosin cross-bridges during a twitch resulted in Ca2+ being released from troponin as judged from changes in the Ca2+ transients (Fura-2 (340/380) fluorescence ratio). Thus dissociation of force-generating myosin cross-bridges cause Ca2+ to be released from cTnC. Conversely, it would be expected that removal of strongly bound Ca2+ from cTnC would result in an increase in the rate of dissociation of force-generating myosin cross-bridges. To test this hypothesis actomyosin ATPase (NADH fluorescence change) and isometric force were measured in skinned cardiac preparations. The ratio of the ATPase/Force is proportional to the rate constant (gapp) for the dissociation of force-generating myosin cross-bridges. The data showed that decreasing the amount of Ca2+ bound to cTnC in skinned cardiac fibers caused an increase in the ratio of ATPase/Force, the rate of dissociation (gapp) of force-generating myosin cross-bridges.

Animals↗

PubMed1993

Differential effects of anionic, cationic, nonionic, and physiologic surfactants on the dissociation, alpha-chymotryptic degradation, and enteral absorption of insulin hexamers.

Various surfactants were investigated to compare their effects on insulin dissociation, alpha-chymotryptic degradation, and rat enteral absorption. With a circular dichroism technique, sodium dodecyl sulfate (SDS) at a 5 mM concentration was found to completely dissociate porcine-zinc insulin hexamers (0.5 mg/ml) into monomers. The catalytic activity of alpha-chymotrypsin (0.5 microM) was also abolished by 5 mM SDS. When insulin was injected into the distal jejunum/proximal ileum segment of the rat, 5 mM SDS greatly enhanced its pharmacological availability, from a negligible value to 2.8%. Being a cationic surfactant, hexadecyl trimethylammonium bromide (CTAB) also efficiently dissociated insulin hexamers at concentrations of 1-5 mM. However, extensive charge-charge interaction was observed below a CTAB concentration of 0.6 mM, leading to insulin precipitation at a molar CTAB:insulin ratio of 1:1 to 2:1. An alpha-chymotryptic degradation study also revealed near-complete dissociation of insulin hexamers at 1 mM CTAB. Above 1 mM, however, CTAB acted as an enzyme inhibitor, most likely by means of charge repulsion. Enteral absorption studies showed a much lower pharmacological availability, only 0.29%. Nonionic surfactants such as Tween 80 and polyoxyethylene 9 lauryl ether were ineffective in dissociating insulin hexamers. Tween 80, at 5 mM, neither significantly altered the alpha-chymotryptic degradation pattern nor enhanced the enteral absorption of insulin. The relative effectiveness of different species of bile salts on insulin hexamer dissociation appeared to be similar. Sodium glycocholate at a 30 mM concentration also significantly increased insulin pharmacological availability, to 2.3%. A morphological study did not reveal any significant alteration of the rat intestinal mucosal integrity after exposure to 5 mM SDS for 30 min.2+ transport.

Administration, Oral↗

PubMed2003

Modulated structure of solid iodine during its molecular dissociation under high pressure.

The application of pressure to solid iodine forces the molecules in the crystal to approach each other until intermolecular distances become comparable to the bond length of iodine; at this point, the molecules lose their identity and are essentially dissociated. According to room-temperature X-ray diffraction studies, this process involves direct dissociation of iodine molecules at about 21 GPa, whereas spectroscopic observations have identified intermediate molecular phases at pressures ranging from 15 to 30 GPa. Here we present quasi-hydrostatic powder X-ray diffraction measurements that clearly reveal an intermediate phase during the pressure-induced dissociation of solid iodine. We find that, similar to the behaviour seen in uranium, the structure of this intermediate phase is incommensurately modulated, with the nearest interatomic distances continuously distributed over the range 2.86-3.11 A. The shortest of these interatomic distances falls between the bond length of iodine in the molecular crystal (2.75 A) and the nearest interatomic distance in the fully dissociated monatomic crystal (2.89 A), implying that the intermediate phase is a transient state during molecular dissociation. We expect that further measurements at different temperatures will help to elucidate the origin and stability of the incommensurate structure, which might lead to a better understanding of the molecular-level mechanism of the pressure-induced dissociation seen here and in the molecular crystals of hydrogen, oxygen and nitrogen.

Journal Article↗

PubMed1973

Subunit interactions in horse spleen apoferritin. Dissociation by extremes of pH.

1. The dissociation of horse spleen apoferritin as a function of pH was analysed by sedimentation-velocity techniques. The oligomer is stable in the range pH2.8-10.6. Between pH2.8 and 1.6 and 10.6 and 13.0 both oligomer and subunits can be detected. At pH values between 1.6 and 1.0 the subunit is the only species observed, although below pH1.0 aggregation of the subunits to a particle sedimenting much faster than the oligomer occurs. 2. When apoferritin is first dissociated into subunits at low pH values and then dialysed into buffers of pH1.5-5.0, the subunit reassociates to oligomer in the pH range 3.1-4.3. 3. U.v.-difference spectroscopy was used to study conformational changes occurring during the dissociation process. The difference spectrum in acid can be accounted for by the transfer of four to five tyrosine residues/subunit from the interior of the protein into the solvent. This process is reversed on reassociation, but shows the same hysteresis as found by sedimentation techniques. The difference spectrum in alkali is more complex, but is consistent with the deprotonation of tyrosine residues, which appear to have rather high pK values. 4. In addition to the involvement of tyrosine residues in the conformational change at low pH values, spectral evidence is presented that one tryptophan residue/subunit also changes its environment before dissociation and subsequent to reassociation. 5. Analysis of the dissociation and reassociation of apoferritin at low pH values suggests that this is a co-operative process involving protonation and deprotonation of at least two carboxyl functions of rather low intrinsic pK. The dissociation at alkaline pH values does not appear to be co-operative. 6. Of the five tyrosine residues/subunit only one can be nitrated with tetranitromethane. Guanidination of lysine residues results in the modification of seven out of a total of nine residues/subunit. Nine out of the ten arginine residues/subunit react with cyclohexanedione.

Amino Acids↗

PubMed1991

Inhibition of subunit dissociation and release of the stimulatory G-protein, Gs, by beta gamma-subunits and somatostatin in S49 lymphoma cell membranes.

We examined the interaction between the stimulatory guanine-nucleotide-binding protein, Gs, and the inhibitory guanine-nucleotide-binding protein, Gi, in cell membranes of S49 lymphoma cells. In these cells, beta-adrenergic receptors stimulate the activity of adenylate cyclase via Gs, whereas inhibition via somatostatin receptors is transduced by an inhibitory G-protein, Gi. Using an antibody that selectively recognizes alpha s, the monomeric, but not the heterotrimeric, alpha-subunit of Gs, we quantified the extent of dissociation of Gs in a competitive e.l.i.s.a. Incubation of S49-cell plasma membranes with 0.1 microM-isoprenaline, 100 microM free Mg2+ and 100 microM-GTP produced substantial subunit dissociation of Gs, which was reversible by addition of purified beta gamma-subunit dimer or somatostatin. Somatostatin produced an immediate (without a lag) time- and concentration-dependent decrease in the concentration of dissociated Gs (kinhib. for somatostatin = 51 +/- 12 nM) and in the activity of adenylate cyclase (kinhib. = 121 +/- 20 nM). By contrast, after addition of a 10-fold molar excess of beta gamma-dimer relative to alpha s, there was a 2-3 min lag, after which the beta gamma-dimer re-associated Gs. Isoprenaline-induced dissociation of Gs was accompanied by a release of alpha s from the incubated membranes to a post-100,000 g supernatant, and somatostatin could reverse this release. Immunoblot analysis with both a C-terminal anti-peptide antibody and an antibody directed against a sequence near the N-terminal also showed release of alpha s by the beta-agonist and reversal by somatostatin. Membrane release of Gs by isoprenaline that could be blocked by somatostatin was also confirmed in reconstitution studies of supernatant fraction into cyc- S49-cell membranes. We conclude that in native cell membranes somatostatin-induced activation of Gi dissociates Gi and interferes with the Gs activation cycle by providing beta gamma-dimer, which acts to prevent or reverse formation of monomeric alpha s. Because alpha s can be released from the cell membrane, regulation of the local concentration of GTP-liganded dissociated alpha s is likely to be an important factor in modulating the activity of adenylate cyclase.

Animals↗

PubMed2004

Dissociation of multiply ionized isocyanic acid through electron impact.

The dissociation of singly to triply ionized isocyanic acid (HNCO) has been investigated by two- and three-dimensional covariance mapping techniques through electron impact ionization at an electron energy of 200 eV. The absolute cross sections for the various dissociation channels of up to triply ionized HNCO have been measured. The HNCO dications dissociate mostly into ion pairs, while the HNCO trications dissociate mostly into ion triples, both through all the possible bond cleavages and charge allocations. Some major ion-pair dissociation channels of HNCO2+ are supposed to be sequential dissociation through initial charge separation. The metastable decay traces caused by HNCO(2+)-->H(+)+NCO+ and HNCO(+)-->HCO(+)+N have been observed on the covariance map.

Journal Article↗

PubMed2004

Aqua dissociation nature of cesium hydroxide.

To understand the mechanism of aqueous base dissociation chemistry, the ionic dissociation of cesium-hydroxide in water clusters is examined using density functional theory and ab initio calculations. In this study, we report hydrated structures, stabilities, thermodynamic quantities, dissociation energies, infrared spectra, and electronic properties of CsOH(H(2)O)(n=0-4). With the addition of water molecules, the Cs-OH bond lengthened significantly from 2.46 A for n=1 to 3.08 A for n=4, which causes redshift in Cs-O stretching frequency. It is found that three water molecules are needed for the dissociation of Cs-OH, in contrast to the case of strong acid dissociation which requires at least four water molecules. However, the dissociation for n=3 could be considered as incomplete because a very weak CS em leader OH stretch mode is still present, while that for n=4 is complete since the Cs em leader OH mode no longer exists. This study can be related with hydration chemistry of cations and anions, and extended into the intra- and intercharge-transfer phenomena.

Journal Article↗

PubMed2004

Microcanonical unimolecular rate theory at surfaces. II. Vibrational state resolved dissociative chemisorption of methane on Ni(100).

A three-parameter microcanonical theory of gas-surface reactivity is used to investigate the dissociative chemisorption of methane impinging on a Ni(100) surface. Assuming an apparent threshold energy for dissociative chemisorption of E(0)=65 kJ/mol, contributions to the dissociative sticking coefficient from individual methane vibrational states are calculated: (i) as a function of molecular translational energy to model nonequilibrium molecular beam experiments and (ii) as a function of temperature to model thermal equilibrium mbar pressure bulb experiments. Under fairly typical molecular beam conditions (e.g., E(t)>/=25 kJ mol(-1), T(s)>/=475 K, T(n)</=400 K), sticking from methane in the ground vibrational state dominates the overall sticking. In contrast, under thermal equilibrium conditions at temperatures T>/=100 K the dissociative sticking is dominated by methane in vibrationally excited states, particularly those involving excitation of the nu(4) bending mode. Fractional energy uptakes f(j) defined as the fraction of the mean energy of the reacting gas-surface collision complexes that derives from specific degrees of freedom of the reactants (i.e., molecular translation, rotation, vibration, and surface) are calculated for thermal dissociative chemisorption. At 500 K, the fractional energy uptakes are calculated to be f(t)=14%, f(r)=21%, f(v)=40%, and f(s)=25%. Over the temperature range from 500 K to 1500 K relevant to thermal catalysis, the incident gas-phase molecules supply the preponderance of energy used to surmount the barrier to dissociative chemisorption, f(g)=f(t)+f(r)+f(v) approximately 75%, with the highest energy uptake always coming from the molecular vibrational degrees of freedom. The predictions of the statistical, mode-nonspecific microcanonical theory are compared to those of other dynamical theories and to recent experimental data.

Journal Article↗

PubMed2005

Selective OD bond dissociation of HOD: photodissociation of vibrationally excited HOD in the 5nu(OD) state.

Exclusively selective OD bond dissociation of HOD has been demonstrated by the ultraviolet photodissociation at 243.1 nm through the fourth overtone state of the OD stretching mode (5nu(OD)). Branching ratio between the OH and OD bond dissociation channels has been determined by detecting H and D atoms, utilizing a (2+1) resonance-enhanced multiphoton ionization (REMPI) process. The OD bond dissociation has been solely observed with the branching ratio phi(D+OH)/phi(H+OD)>12, which has been determined by the detection limit for the H atom. Time-dependent wave-packet calculations reveal two important features for the highly selective OD bond dissociation: (1) strong local-mode character of the 5nu(OD) state and (2) limitation of the total excitation energy lower than the saddle point between the OH and OD dissociation channels in the A state. Additionally, the recoil velocity and angular distribution of the nascent D atom are roughly evaluated by analyzing the Doppler-resolved REMPI spectrum. Based on these results, the dynamics of the selective OD dissociation has been discussed in detail.

Journal Article↗

PubMed2006

Quantum optimal control of molecular isomerization in the presence of a competing dissociation channel.

The quantum optimal control of isomerization in the presence of a competing dissociation channel is simulated on a two-dimensional model. The control of isomerization of a hydrogen atom is achieved through vibrational transitions on the ground-state surface as well as with the aid of an excited-state surface. The effects of different competing dissociation channel configurations on the isomerization control are explored. Suppression of the competing dissociation dynamics during the isomerization control on the ground-state surface becomes easier with an increase in the spatial separation between the isomerization and dissociation regions and with a decrease in the dissociation channel width. Isomerization control first involving transfer of amplitude to an excited-state surface is less influenced by the dissociation channel configuration on the ground-state surface, even in cases where the excited-state surface allows for a moderate spreading of the excited wave packet.

Journal Article↗